CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027569	Megasphaera elsdenii strain NCIMB702410 chromosome, complete genome	11 crisprs	cas14k,c2c10_CAS-V-U3,RT,cas14j,DEDDh,csa3,Cas14u_CAS-V,cas3,cas6,csx1,cas10,csm3gr7,csx10gr5,csx19,cas2,cas1,WYL,cas5,cas8c,cas7,cas4	0	13	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027569_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_1

977377-977479

TypeV

Consensus_repeat	Method
GTGTACATCATTGTTCCAAGCGGGCCGCCC	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of NZ_CP027569_1

>merge|NZ_CP027569|1|977377-977479|CRISPRCasFinder
GTGTACATCATTGTTCCAAGCGGGCCGCCCTTTGGGACGGCCCCTACGCGATGGCCTGCCATGTATTTATAATGTGTACATCATTGTCCAAGCGGGCCGCCCG

>NZ_CP027569|1|1|977377-977479|CRISPRCasFinder
GTGTACATCATTGTTCCAAGCGGGCCGCCC	TTTGGGACGGCCCCTACGCGATGGCCTGCCATGTATTTATAAT
GTGTACATCATTGTCCAAGCGGGCCGCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_014015418.1\|977129_977339_-\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	unknown	unknown	gnl\|CDD\|376549
NZ_CP027569.1\|WP_080596478.1\|980954_982265_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|365905
NZ_CP027569.1\|WP_027895582.1\|973704_975060_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223377
NZ_CP027569.1\|WP_027895581.1\|977639_979922_-\|carbamoyltransferase-HypF	unknown	unknown	gnl\|CDD\|223146
NZ_CP027569.1\|WP_014015428.1\|993454_994603_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
NZ_CP027569.1\|WP_027895585.1\|969133_970462_-\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|237031
NZ_CP027569.1\|WP_014015417.1\|976071_977130_-\|hydrogenase-formation-protein-HypD	unknown	unknown	gnl\|CDD\|376666
NZ_CP027569.1\|WP_022496895.1\|975074_976079_-\|hydrogenase-expression/formation-protein-HypE	unknown	unknown	gnl\|CDD\|100033
NZ_CP027569.1\|WP_027895580.1\|982261_983017_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349759
NZ_CP027569.1\|WP_014015423.1\|983026_983278_-\|iron-only-hydrogenase-system-regulator	unknown	unknown	gnl\|CDD\|274882
NZ_CP027569.1\|WP_014015420.1\|979923_980958_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365905
NZ_CP027569.1\|WP_014015413.1\|971722_972469_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349759
NZ_CP027569.1\|WP_014015424.1\|983618_984875_-\|cation:dicarboxylase-symporter-family-transporter	unknown	unknown	gnl\|CDD\|234968
NZ_CP027569.1\|WP_014015427.1\|992798_993149_-\|desulfoferrodoxin	unknown	unknown	gnl\|CDD\|239421
NZ_CP027569.1\|WP_014015426.1\|985258_985507_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895583.1\|972481_973708_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365905
NZ_CP027569.1\|WP_054336394.1\|966250_967366_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP027569.1\|WP_014015425.1\|985049_985256_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|224559
NZ_CP027569.1\|WP_027895584.1\|970511_971708_-\|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF	unknown	unknown	gnl\|CDD\|274853
NZ_CP027569.1\|WP_027895586.1\|967840_969109_-\|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl\|CDD\|274109

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_014015418.1\|977129_977339_-\|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	gnl\|CDD\|376549	pfam01455, HupF_HypC, HupF/HypC family.	1.92893e-23
NZ_CP027569.1\|WP_080596478.1\|980954_982265_-\|oxidoreductase	gnl\|CDD\|365905	pfam00148, Oxidored_nitro, Nitrogenase component 1 type Oxidoreductase.	1.4426e-26
NZ_CP027569.1\|WP_027895582.1\|973704_975060_-\|hypothetical-protein	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	0.000551894
NZ_CP027569.1\|WP_027895581.1\|977639_979922_-\|carbamoyltransferase-HypF	gnl\|CDD\|223146	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP027569.1\|WP_014015428.1\|993454_994603_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
NZ_CP027569.1\|WP_027895585.1\|969133_970462_-\|aspartate-ammonia-lyase	gnl\|CDD\|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0
NZ_CP027569.1\|WP_014015417.1\|976071_977130_-\|hydrogenase-formation-protein-HypD	gnl\|CDD\|376666	pfam01924, HypD, Hydrogenase formation hypA family. HypD is involved in hydrogenase formation. It contains many possible metal binding residues, which may bind to nickel. Transposon Tn5 insertions into hypD resulted in R. leguminosarum mutants that lacked any hydrogenase activity in symbiosis with peas.	0
NZ_CP027569.1\|WP_022496895.1\|975074_976079_-\|hydrogenase-expression/formation-protein-HypE	gnl\|CDD\|100033	cd02197, HypE, HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the ATP-binding domains of the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP.	1.15693e-155
NZ_CP027569.1\|WP_027895580.1\|982261_983017_-\|AAA-family-ATPase	gnl\|CDD\|349759	cd02040, NifH, nitrogenase component II NifH. NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.	4.76856e-136
NZ_CP027569.1\|WP_014015423.1\|983026_983278_-\|iron-only-hydrogenase-system-regulator	gnl\|CDD\|274882	TIGR03959, putative_iron-only_hydrogenase_system_regulator, putative iron-only hydrogenase system regulator. Members of this protein family occur as part of a system for producing iron-only hydrogenases, dependent on radical SAM proteins HydE and HydG and GTPase HydF. One member of this family, TM_1266 from Thermotoga maritima, has a known crystal structure. The small size, about 80 residues, and a distant relationship to the nickel regulator NikR of the CopG transcriptional regulator family suggest a role as a transcription factor. [Regulatory functions, DNA interactions].	8.62334e-39
NZ_CP027569.1\|WP_014015420.1\|979923_980958_-\|hypothetical-protein	gnl\|CDD\|365905	pfam00148, Oxidored_nitro, Nitrogenase component 1 type Oxidoreductase.	3.71443e-25
NZ_CP027569.1\|WP_014015413.1\|971722_972469_-\|AAA-family-ATPase	gnl\|CDD\|349759	cd02040, NifH, nitrogenase component II NifH. NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.	2.9022e-135
NZ_CP027569.1\|WP_014015424.1\|983618_984875_-\|cation:dicarboxylase-symporter-family-transporter	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	8.88775e-140
NZ_CP027569.1\|WP_014015427.1\|992798_993149_-\|desulfoferrodoxin	gnl\|CDD\|239421	cd03171, SORL_Dfx_classI, Superoxide reductase-like (SORL) domain, class I; SORL-domains are present in a family of mononuclear non-heme iron proteins that includes superoxide reductase and desulfoferrodoxin. Superoxide reductase-like proteins scavenge superoxide anion radicals as a defense mechanism against reactive oxygen species and are found in anaerobic bacteria and archeae, and microaerophilic Treponema pallidum. Desulfoferrodoxin (class I) is a homodimeric protein, with each protomer comprised of two domains, the N-terminal desulforedoxin (DSRD) domain and C-terminal SORL domain. Each domain has a distinct iron center: the DSRD iron center I, Fe(S-Cys)4; and the SORL iron center II, Fe[His4Cys(Glu)].	3.13623e-31
NZ_CP027569.1\|WP_027895583.1\|972481_973708_-\|hypothetical-protein	gnl\|CDD\|365905	pfam00148, Oxidored_nitro, Nitrogenase component 1 type Oxidoreductase.	1.88858e-30
NZ_CP027569.1\|WP_054336394.1\|966250_967366_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.52e-58
NZ_CP027569.1\|WP_014015425.1\|985049_985256_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|224559	COG1645, COG1645, Uncharacterized Zn-finger containing protein [General function prediction only].	0.000205554
NZ_CP027569.1\|WP_027895584.1\|970511_971708_-\|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF	gnl\|CDD\|274853	TIGR03918, hydrogenase_maturation_GTPase_HydF, [FeFe] hydrogenase H-cluster maturation GTPase HydF. This model describes the family of the [Fe] hydrogenase maturation protein HypF as characterized in Chlamydomonas reinhardtii and found, in an operon with radical SAM proteins HydE and HydG, in numerous bacteria. It has GTPase activity, can bind an 4Fe-4S cluster, and is essential for hydrogenase activity. [Protein fate, Protein modification and repair].	0
NZ_CP027569.1\|WP_027895586.1\|967840_969109_-\|RNA-polymerase-factor-sigma-54	gnl\|CDD\|274109	TIGR02395, RNA_polymerase_sigma-54_factor, RNA polymerase sigma-54 factor. A sigma factor is a DNA-binding protein protein that binds to the DNA-directed RNA polymerase core to produce the holoenzyme capable of initiating transcription at specific sites. Different sigma factors act in vegetative growth, heat shock, extracytoplasmic functions (ECF), etc. This model represents the clade of sigma factors called sigma-54, or RpoN (unrelated to sigma 70-type factors such as RpoD/SigA). RpoN is responsible for enhancer-dependent transcription, and its presence characteristically is associated with varied panels of activators, most of which are enhancer-binding proteins (but see Brahmachary, et al., ). RpoN may be responsible for transcription of nitrogen fixation genes, flagellins, pilins, etc., and synonyms for the gene symbol rpoN, such as ntrA, reflect these observations [Transcription, Transcription factors].	1.00705e-83

>NZ_CP027569.1|WP_014015418.1|977129_977339_-|HypC/HybG/HupF-family-hydrogenase-formation-chaperone
MCVGLPARVMKIQNGMALVDASGAKREVSAALIDELDPGDYVMVHAGMAIAKITNNDADETDDILEELD
>NZ_CP027569.1|WP_014015417.1|976071_977130_-|hydrogenase-formation-protein-HypD
MAEAKKRTALDIIRSYDGPKIRIMEVCGTHTHEIFRQGIRQILPPQVDVISGPGCPVCVTPVGYIDQAIWLALEKGVTICTFGDLVRVPGSTMSLADARSEGAHVEIVYSPLDAYDYAKAHPDEDVVFLSVGFETTTPPSCLAVKQAVADGMTNFSLLTANKTMPMAYEAMKDSADAFLYPGHVDAVMGTGDGEAMLKEGVSGVVAGFTAKELLTAFAVILAKFPQGKPFFKNCYPRVVKAEGSPAAQALMKEVMEPCDSEWRGLGVIPQSGQQLRPAFAVCDARKKYGVPDMDGRANPACRCGDILKGQCKPPQCPLFGKVCTPEHPVGACMVSHEGACSAYYLYGGNLHE
>NZ_CP027569.1|WP_022496895.1|975074_976079_-|hydrogenase-expression/formation-protein-HypE
MSDVITLAHGAGGKQTAELIDRVFKAHFSNPQFTGDDAAVLPIGGANLAFTTDGFIVSPPEFPGGNIGKLSICGTVNDLSCMGAKPLYLSCAFVIEEGFPLAKVEEYAAAMAKTAAEAGVRIVAGDTKVAGKGQVDHLFITTTGIGQIVDGVHTSGTLARPGDAVIVSGDVGRHGCTILLARNQFGIDADVTSDCAPLWGTVEAMLDTTKDIHVIRDATRGGVGTVLYEIAGQSHVGIHLDSQAIPVDPAVRGVCGMLGLEPLYLACEGRLVIFAPKAVAGDIVATLRQGKYSKDAAIIGEVTADQPGRVIMRTEIGAETLLPPPGGELLPRIC
>NZ_CP027569.1|WP_027895582.1|973704_975060_-|hypothetical-protein
MIYENEIHPPQVPRYHVTPDGAEIAIGQASFPKPFHIGLQYASPARGHWTIAHSPMLIPGCHEIYVCCACCLHGVVLSADEVPDGAGRFSMVTLTNENLIKGNLEEMMIDGISHIIDDMPERPKCVEGFTSCMQHFLHIDLHVVYDTLRQKYPDIDFIDGYMIPTLQRRFTPDILGRRQLVRAVQPLPKQKAVNYVVNYYPVDEDNELTVMLRQGGYAIHDFAACKTYEEYKAMGESQANIYFLENAGPAAKDMEKRLDQQALYLPYAYDYETLRRNLQQAAQILGLDLPDCDAYERAVEEKVRALKERVGDTHIAIDYTATPRPLGLAKFLLIHGFNVYAVYLDAISPDEKDTFQFLQTHYPDLSLRSTMHFKRRLLPRDDSRKYGKVLAIGQMAAYFTDTKYFVNLIENSGLYGYVGLLKLLDWIGRADEAENPKMRDIIQIKAWGCHG
>NZ_CP027569.1|WP_027895583.1|972481_973708_-|hypothetical-protein
MKQAQRVLSTYAVDMFGIASSLFELGGLIVMHDASGCNSTYDTHDEPRWYDTPSMVYISGLNEIDTIQGNDQRLVDDIAEAVEAAHPRFVAIGGSPMPNAIGTDFKAIERLVAARTGLPTLGFRTDGIHSYLPGAGGAYVWLAKTFVKAPEKAPQRPAKRVNLLGLTPLDFSVIGNATTLKQIVTDAGFTLQSSWSMGDTLDQLATAANADVNVVLSSTAFYLAQYLRDTYGIPYVVGIPMGEKGTADWLEALRNCDSSYLTGFTGQEKYIRAQYALADLNAWKTEQAYDDTPCDVLVIGEPVYLLSMKAFLQQEMGLSDVRLLCPLADAPRWLLEQVEVASVEDVIRQECHKARRVIADPIYARLLPDEKEKFVSMPHEAYSGRHYHDDMPIFVGPSFTAWMKEKLT
>NZ_CP027569.1|WP_014015413.1|971722_972469_-|AAA-family-ATPase
MRKFAIYGKGGIGKSTTTANLSAALSMMGKKVVQVGCDPKADSTLNLLHGEPVMPVMDYYRKYTEGPDFEHIGKEGFGGVFCIETGGPTPGLGCAGRGIIATFDLMDEQEVFQKLQPDVVLYDVLGDVVCGGFSAPIRDGYADEIFIVTSGEKMALYAAANIIKAVENFKSRGYAQVKGIILNRRNVDDEYELVKAFADEHGLPIVADIPRSKDIQYYENKGMTVVEGNPDLAVSQIYQDLARKLLQA
>NZ_CP027569.1|WP_027895584.1|970511_971708_-|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF
MGMNDTPSGERVHIGFFGRRNAGKSSVVNAVTGQNLSIVSATKGTTTDPVYKAMELLPLGPVVIIDTPGFDDVGALGEERVRRTKQVLNKTDIAVVIIDAAEGRSPADDEVLNLIRDKNLPYLIVYNKADLLDQPFKAQDHEIYVSALKGEGIHELKERLARLKPVETASPIVSDLIQGGDFVVLVVPIDTAAPKGRLILPQQQTIREIIDNDSAAIVVKEYELRHTLECLGQKPALVITDSQVFAKVSADTPMDVRLTSFSILMARHKGLLETAVRGVTAIEKLQDGDTVLIAEGCTHHRQCDDIGTVKIPRWLRNYTHKDIRIETASGRDFPEDLSPYALVIHCGGCMLNGREVQYRMKCAADQAVPITNYGIAIAYMQGILKRSLSVFPYLQSLV
>NZ_CP027569.1|WP_027895585.1|969133_970462_-|aspartate-ammonia-lyase
MKKTRIERDVLGEVELPEGTMYGINTARALENFSLGHKRTALELIYAMVTVKKAAALTYARLGVREDGIYQAIAAACDAILAGQYDDAFVTEALQGGAGTSTNMNVNEVIANAALLKLGKRPGQYDVIHPLDDVNRGQSTNDVYPTALRIAAIRKLRELSQACADLQEAFQHKEQAYEKTYKLGRTELMDAVPMTAGEEFGAYAQALSRDRWRLYKIEERLRMVNLGGTAIGTSDTASRQYRYEVIEELRRLTGIGLAAAEYPVDLTQNNDVFVEVSGLLKALAVNLMKIANDLRLMNSGPHGGIGEIRLPACQQGSSIMPGKVNPVIPEMVMQCAMKVMADDSAIAMAAAHGEFELNAFEPLIADCLLESLQLLIRSVRIFQTACVEGLEVREDRCQQNLKASAAFGAAYIGALGYDTVSRIIKDHEPDEARRILEAMVKK
>NZ_CP027569.1|WP_027895586.1|967840_969109_-|RNA-polymerase-factor-sigma-54
MSNLSLKLEQKAKILQVQRLTIQMLALHGQDLVDFLQEKVTANPLMDICYHDVRADEEKGRKAIENVHNHGASLEAKLMAQLRVQTLPKPVMLAAGLVIGSLDAKGFFQGDLASLGRAYQLGPADMEKGLALVQSFDPPGIAARDLREALLIQTRRARKAPLQAEALLEMHYEAFLQGKWQKIQSALGLSDRELRDIRDFFKSLSLQPASQIVQEEVYIRPDIEIYCDAKGQLTQRSLEDIPDVYFRDDLYDQYAARGDKEILDYIRKARRDFTDLASALAYRHHSIEQVVACLMDRQKDYFLHHRSLRPLRQKDIAADTQLSTATVSRVCRHRYVLFEGRIYPLQSFLATAYPSDTEGSVSDKVIMEKIAALIASEDKSHPYSDQDLSECLALSDRISVARRTVTKLRQKLNIPNSRIRRL
>NZ_CP027569.1|WP_054336394.1|966250_967366_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MIVNKAYRYRLYPTREQKIMFAKTFGCVRFIYNKMLSDRIDYYKETGQKLNNTPAQYKEDFPWLKEVDSLALANAQLNLNKAYSHFWNDSQHFGKPRFKSKKNSRASYSTNNQKGSVRIEGHKVKLPKVGWVKLCQHRPLPENSIIKTVTISKTPSGKYYISMLVEYENQVLPVIPKTFLGLDFAMHGLYVASDEEDAKYPDFLRKAEKRLAKAQQKLSKKQKGSHNREKQRLRVAILHEKVANQRRDFLHKKSRYLADRYDAIGIEDISVKAMAKRKKGGKFSFGKSVADNGWNLFTNMLEYKLAWQGKQLIKIDKWYPSSQLCHVCGYRTSETKDLSVREWNCPKCGSHHDRDKNAAINIREEARRISA
>NZ_CP027569.1|WP_027895581.1|977639_979922_-|carbamoyltransferase-HypF
MYTERICVFGIVQGVGFRPFVSRIATAHSICGTVCNKGSYVEILAQGSQSDLAAFREDLEARAPERSAILKVLRESEDRPPYEAFSIVESAREEGDIFVSPDIAICDACKKELFDKTNRRYLHPFINCTACGPRLTILDAMPYDRERTSMGEFPMCPQCEYEYTHAETRRYDAQPVCCNDCGPEVYLLDRPERRRQAIIAARQAIVDGRIIAIKGIGGFHLCCDARNEQAVRTLRQRKRRPVKPFAVMMKDLEAVRRQCVIPDGAEKVLDGHQKPIVLLPKKSGQTLAPSIAPGNPSVGVMLPYTPLHLLLFTYDDDLSVPDALVMTSANESGAPICHNDEEARQELSGLCDLVLSHNRRIRLRADDSVMDWYDGRPYMIRRSRGYAPLPFFYGRGSGKDVLAMGGELKNCFCIGRNNLFYPSPYIGDMADIRTVEALRQSIRRMTTLLEAKPAVVACDLHPRYNTTAVAHELGLPVVAVQHHYAHILSCMAENGCEQPVIGVAFDGTGYGTDGTIWGGEILVSQVQGFRRAGSIQPFWQRGGDASAREGWRIAVSIIDGLQEDREKASAIIDELQLCSAVEKQAQFFLADQQINSVLSTSAGRLFDGVSAILGICRASTFEGQASMALQFAAETWEKEHPQPAVQPMAPLHDKERLLLPTGALVQRLLEERLAGGNTGQLAYVFHRDLAAMIAGACLAVREETGLTTAALSGGVFQNRLLLRLCDQTLQQLGFTVLKHSTVPPNDGGIALGQAVYAAYM
>NZ_CP027569.1|WP_014015420.1|979923_980958_-|hypothetical-protein
MKGLWKYISPFAPDDSGAAAVLYGLNGIVVICDAGGCAGNICGFDEPRWFSGKKSAVFSAGLRDMDAILGRDDRLVDKLCDAAKTIDASFAAIVGTPVPSVIGTDYKALKRMAEKRLSLPVVTVDTTGMDYYDKGIEKAYEALFPALIDPSQQAEADTVGVLGAVPLELMHPGDIEWISQSLVEDGWQQILLFDEIDDYRKAGKASLNLVVSPAGLKAAQYLKETFGTPYELHYFGLDAVVDFDDNLFAGKNVLIIHQQVAASAMAAMAEEAGAAYVTTASWFMELPGPQSTDYVQLREEDDLRQLADNDHFDVILGDAYFRRALPNFHGQYIDFPHFAVSGRG
>NZ_CP027569.1|WP_080596478.1|980954_982265_-|oxidoreductase
MIMTERKPYAITVQDLVERGRDDIPAELITSTHLIYNSPAALAFNSPGAQGFGVKRAGLSIPGSVMLLVGPGCCGRNTTILSELGGYSDRFFFYIMDETDIVTGRHLKKIPQAVCEVVDSLAEKPSVVMICMTCVDALLGTDMERVCRKAEKEAGLPVVPCYMYALTREGRKPPMVDVRRAIYSLLEKQPRRRRTVNLLGYFAPLQDDCEIYDILRGVGFTQINEISRCPDFAAYKAMSQANVNFILNPESRLAAQDMEKRLGIPSVELTRLYQVAQIHKQYQALAQVLGTEIDDSSWHERAQAVVGKMREKYSGTTVAIGEMQNGNAFEMALALTRYGFVIKEIYANLGPDDFVYLRHLAALSPDTEVYSNLSPSMLYYQGQDHPVDVTIGKDAAYYHEQAAHLHWDEDIQPFGYAGVISLLQGLDRVLSERKHP
>NZ_CP027569.1|WP_027895580.1|982261_983017_-|AAA-family-ATPase
MLKIAIYGKGGIGKSTMTSNLAASFAYLGKRVIQIGCDPKADSTFNLLGGHPVQPVMNYLREHDEDPESIEDISRIGYGGVLCIETGGPTPGLGCAGRGIIATFSLLEDLGLFEKYEPDVVLYDVLGDVVCGGFAAPIREGYAEQVLIVTSGEKMALYAANNINTAVANFADRSYAKVRGIILNRRNVPDEEAKVRAFADRAHLSIVGDIPRSDDINRYEDLGQTVIEGDPDLPISRTFLDLAQKLLQDKE
>NZ_CP027569.1|WP_014015423.1|983026_983278_-|iron-only-hydrogenase-system-regulator
METRVALIGIIVGNRQESAKLNEILHEYGQYVVGRMGVPYKDKDINVISLIVDAPQDVISALSGKLGMLPDVSTKTIYPPMPQ
>NZ_CP027569.1|WP_014015424.1|983618_984875_-|cation:dicarboxylase-symporter-family-transporter
MKRKIGLSSQILIGLVLGALVGYLFPDFGDKLKPFGDAFLRMIKMIVVPLIFSTLVMGIAGTGDFKKLGRLGGKAIIWFEFATTIALAIGLLFMNIAEPGVGVTLSASAANASNAAAASQHSVDLVDYAVHIIPTNIVDAMARQDMLQIIFFACFFGVAVAHIGGKGETIVDICQSVAEAMFKVTGYVMHFAPIGVFAMIAYTVGSYGIAMLIPLGKLILSVACATALFICVVALIASVFTGINFFHVIRALKDILFLAFSTASSEAALPGAMKRLEELGVPKTIVTFVMPTGYSFNLDGSTLYSSAGILFIAQLYGIQMPIEQQLLVMVTLMLSTKGIAGVPGAGIIVVAATAAAFNLPTEGVAILLGIDRLLDMIRTICNVCGNCMATVVVACWEKELNKATFNEKYRAFLGGKNS
>NZ_CP027569.1|WP_014015425.1|985049_985256_+|zinc-ribbon-domain-containing-protein
MICPKCGTELRDGVLMCPICGTKQEVPPPVPPKNIQNNPKIFTKTRVISVIIVAAFIIIGLCKVFVFK
>NZ_CP027569.1|WP_014015426.1|985258_985507_-|hypothetical-protein
MLSRTLLGMRWGDLSEDTRQMLLNRADIDGFNGADGDRYSRGTLHFRDTLMGIQASVETDRFSGDMGNNGIFIDDDAVISRI
>NZ_CP027569.1|WP_014015427.1|992798_993149_-|desulfoferrodoxin
MKDVKFYQLEGKNVLALLSGSVEGAEPIAVGSVDAAKEKHIPVVKRVGDTLEVTVGSVTHPMLEEHHIEWIALATDDKLEIKFLKPGEEPKAVFAAVDSGVVYESCNLHGIWKAEF
>NZ_CP027569.1|WP_014015428.1|993454_994603_-|acyl-CoA-dehydrogenase
MDFKLSEMQQDIAKLAKDFAEKELAPTVKERDEKEVFDRAILDKMGTLGLLGIPWEEENGGVGADFLSLAVACEEVAKVDPSIALSFEVHTMLCSWPIWKFGTAEQKAKYLKPLAEGTKLGAFGLTEPNAGTDALNGSTVATKNEDGSYTLNGSKVFNTNGGEADVTVVFASTDKSKGAKGMSAFILEKGMEGFTYGKEEVKMGIRASVQRELVFQNVKVPAENLLGKEGEGFKIAMMTLDGGRVGVGAQALGIAEGAYNAAVQYAKERTQFGKPIAKFQAISFMLADMKLKIETARLAVYQAAWKMAQPDVKSYSVDAAIAKKYASDVAMQVTTDAVQVFGGYGFTREYPVERYMRDAKITQIYEGTNQVQQMVISGAILR

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Crispr_ID: NZ_CP027569_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_2

1165304-1165436

Orphan

Consensus_repeat	Method
CTTCCGCATGGGAAGCCCGAGCATATGGTCATTTCCACGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027569_2

>merge|NZ_CP027569|2|1165304-1165436|CRISPRCasFinder
CTTCCGCATGGGAAGCCCGAGCATATGGTCATTTCCACGCATTGCAAACAGGCGATGGAAAATATTTGTTTGCGCGAGCAACCCGTAGGGGCTTCCGCGTGGGAAGCCCGAGCATATGGTCATTTCCACGCAT

>NZ_CP027569|2|2|1165304-1165436|CRISPRCasFinder
CTTCCGCATGGGAAGCCCGAGCATATGGTCATTTCCACGCAT	TGCAAACAGGCGATGGAAAATATTTGTTTGCGCGAGCAACCCGTAGGGG
CTTCCGCGTGGGAAGCCCGAGCATATGGTCATTTCCACGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_027895527.1\|1163871_1164588_+\|fatty-acid-co-A-racemase	unknown	unknown	gnl\|CDD\|376873
NZ_CP027569.1\|WP_027895531.1\|1156305_1158816_+\|putative-selenate-reductase-subunit-YgfK	unknown	unknown	gnl\|CDD\|236630
NZ_CP027569.1\|WP_014015567.1\|1153973_1154612_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|377981
NZ_CP027569.1\|WP_027895532.1\|1154954_1156292_+\|putative-aminohydrolase-SsnA	unknown	unknown	gnl\|CDD\|235963
NZ_CP027569.1\|WP_027895522.1\|1170638_1171667_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133000
NZ_CP027569.1\|WP_027895529.1\|1160237_1162928_+\|selenium-dependent-xanthine-dehydrogenase	unknown	unknown	gnl\|CDD\|132354
NZ_CP027569.1\|WP_027895530.1\|1158833_1160225_+\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|236240
NZ_CP027569.1\|WP_014015579.1\|1171830_1172208_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224916
NZ_CP027569.1\|WP_027895525.1\|1167761_1168322_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|319876
NZ_CP027569.1\|WP_080712312.1\|1173242_1173740_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP027569.1\|WP_080712313.1\|1168325_1170518_-\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|130652
NZ_CP027569.1\|WP_027895526.1\|1166544_1167759_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP027569.1\|WP_027895518.1\|1174712_1175648_+\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|238451
NZ_CP027569.1\|WP_027895534.1\|1151135_1152455_-\|YgeY-family-selenium-metabolism-linked-hydrolase	unknown	unknown	gnl\|CDD\|183836
NZ_CP027569.1\|WP_036220648.1\|1165669_1166125_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224854
NZ_CP027569.1\|WP_027895533.1\|1152487_1153696_-\|diaminopropionate-ammonia-lyase	unknown	unknown	gnl\|CDD\|236186
NZ_CP027569.1\|WP_036220651.1\|1163026_1163872_+\|EF2563-family-selenium-dependent-molybdenum-hydroxylase-system-protein	unknown	unknown	gnl\|CDD\|132352
NZ_CP027569.1\|WP_027895521.1\|1172214_1173234_+\|molybdopterin-binding-protein	unknown	unknown	gnl\|CDD\|239599
NZ_CP027569.1\|WP_027895519.1\|1173729_1174707_+\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250
NZ_CP027569.1\|WP_027895535.1\|1149907_1151101_-\|knotted-carbamoyltransferase-YgeW	unknown	unknown	gnl\|CDD\|274517

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_027895527.1\|1163871_1164588_+\|fatty-acid-co-A-racemase	gnl\|CDD\|376873	pfam02634, FdhD-NarQ, FdhD/NarQ family. A pan-bacterial lineage of proteins. Nitrate assimilation protein, NarQ, and FdhD are required for formate dehydrogenase activity. Structurally, they possess a deaminase fold with a characteristic binding pocket, suggesting that they might bind a nucleotide or related molecule allosterically to regulate the formate dehydrogenase catalytic subunit.	3.97076e-40
NZ_CP027569.1\|WP_027895531.1\|1156305_1158816_+\|putative-selenate-reductase-subunit-YgfK	gnl\|CDD\|236630	PRK09853, PRK09853, putative selenate reductase subunit YgfK; Provisional.	0
NZ_CP027569.1\|WP_014015567.1\|1153973_1154612_-\|transcriptional-regulator	gnl\|CDD\|377981	pfam08348, PAS_6, YheO-like PAS domain. This family contains various hypothetical bacterial proteins that are similar to the E. coli protein YheO. Their function is unknown, but are likely to be involved in signalling based on the presence of this PAS domain.	1.13112e-55
NZ_CP027569.1\|WP_027895532.1\|1154954_1156292_+\|putative-aminohydrolase-SsnA	gnl\|CDD\|235963	PRK07203, PRK07203, putative aminohydrolase SsnA.	0
NZ_CP027569.1\|WP_027895522.1\|1170638_1171667_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	3.09491e-44
NZ_CP027569.1\|WP_027895529.1\|1160237_1162928_+\|selenium-dependent-xanthine-dehydrogenase	gnl\|CDD\|132354	TIGR03311, Se_dep_XDH, selenium-dependent xanthine dehydrogenase. Members of this protein resemble conventional xanthine dehydrogenase enzymes, which depend on molybdenum cofactor - molybdopterin bound to molybdate with two sulfur atoms as ligands. But all members of this family occur in species that contain markers for the biosynthesis of enzymes with a selenium-containing form of molybdenum cofactor. The member of this family from Enterococcus faecalis has been shown to act as a xanthine dehydrogenenase, and its activity if dependent on SelD (selenophosphate synthase), selenium, and molybdenum. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_CP027569.1\|WP_027895530.1\|1158833_1160225_+\|dihydropyrimidinase	gnl\|CDD\|236240	PRK08323, PRK08323, phenylhydantoinase; Validated.	0
NZ_CP027569.1\|WP_014015579.1\|1171830_1172208_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|224916	COG2005, ModE, N-terminal domain of molybdenum-binding protein [General function prediction only].	3.13718e-19
NZ_CP027569.1\|WP_027895525.1\|1167761_1168322_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|319876	cd10554, HycB_like, HycB, HydN and similar proteins. This family includes HycB, the FeS subunit of a membrane-associated formate hydrogenlyase system (FHL-1) in Escherichia coli that breaks down formate, produced during anaerobic fermentation, to H2 and CO2. FHL-1 consists of formate dehydrogenase H (FDH-H) and the hydrogenase 3 complex (Hyd-3). HycB is thought to code for the [4Fe-4S] ferredoxin subunit of hydrogenase 3, which functions as an intermediate electron carrier protein between hydrogenase 3 and formate dehydrogenase. HydN codes for the [4Fe-4S] ferredoxin subunit of FDH-H; a hydN in-frame deletion mutation causes only weak reduction in hydrogenase activity, but loss of more than 60% of FDH-H activity. This pathway is only active at low pH and high formate concentrations, and is thought to provide a detoxification/de-acidification system countering the buildup of formate during fermentation.	1.32655e-56
NZ_CP027569.1\|WP_080712312.1\|1173242_1173740_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	7.10415e-91
NZ_CP027569.1\|WP_080712313.1\|1168325_1170518_-\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|130652	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type. This model describes a subset of formate dehydrogenase alpha chains found mainly archaea but also in alpha and gamma proteobacteria and a small number of gram positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized). This model is well-defined, with only a single fragmentary sequence falling between trusted and noise. The alpha subunit of a version of nitrate reductase is closely related.	0
NZ_CP027569.1\|WP_027895526.1\|1166544_1167759_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	6.83734e-122
NZ_CP027569.1\|WP_027895518.1\|1174712_1175648_+\|MOSC-domain-containing-protein	gnl\|CDD\|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	1.07827e-71
NZ_CP027569.1\|WP_027895534.1\|1151135_1152455_-\|YgeY-family-selenium-metabolism-linked-hydrolase	gnl\|CDD\|183836	PRK13004, PRK13004, YgeY family selenium metabolism-linked hydrolase.	0
NZ_CP027569.1\|WP_036220648.1\|1165669_1166125_+\|hypothetical-protein	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.28971e-09
NZ_CP027569.1\|WP_027895533.1\|1152487_1153696_-\|diaminopropionate-ammonia-lyase	gnl\|CDD\|236186	PRK08206, PRK08206, diaminopropionate ammonia-lyase; Provisional.	0
NZ_CP027569.1\|WP_036220651.1\|1163026_1163872_+\|EF2563-family-selenium-dependent-molybdenum-hydroxylase-system-protein	gnl\|CDD\|132352	TIGR03309, matur_yqeB, selenium-dependent molybdenum hydroxylase system protein, YqeB family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes with labile selenium-containing centers, different from selenocysteine-containing proteins.	2.43472e-114
NZ_CP027569.1\|WP_027895521.1\|1172214_1173234_+\|molybdopterin-binding-protein	gnl\|CDD\|239599	cd03522, MoeA_like, MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.	2.84825e-140
NZ_CP027569.1\|WP_027895519.1\|1173729_1174707_+\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	3.37668e-119
NZ_CP027569.1\|WP_027895535.1\|1149907_1151101_-\|knotted-carbamoyltransferase-YgeW	gnl\|CDD\|274517	TIGR03316, aspartate/ornithine_carbamoyltransferase, knotted carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with selenium-dependent molybdenum hydroxylases.	0

>NZ_CP027569.1|WP_027895527.1|1163871_1164588_+|fatty-acid-co-A-racemase
MDYDKKDLHFSSCRELPYIDYHQGAVERKQSIAVEVMTPLYLDGQRISTLVSSPEDVDILAAGYCLAEGKVPAGRKLAHVCLHDEAAWVTTEAGASSVPEKAPFVPITANRLCSYGGLLDSLSTAHHASHGVHEGALVQGDEVLIYTEDIGRHNVLDRLRGFVELQHIDVSQAVLVFSGRVPQSVIEKVHGMGVRFLASRALPTSLGVALAEKYNITLSCGLRPDSFKVFAHKERIVM
>NZ_CP027569.1|WP_036220651.1|1163026_1163872_+|EF2563-family-selenium-dependent-molybdenum-hydroxylase-system-protein
MREKLVIIRGAGDLATGVAQSLYEAGFRLLLLEVERPSAIRRQVALCEAVYDGTATVENLTCRCCQSLAEVQAVWEADDIPLIVDPSGTSIATLKPWAVVDAILAKKNFGTSRQMAAHTVALGPGFTAGVDVDAVIETKRGHQLGRILWQGMAIANTGIPGLIAGYGKERVIHSPRAGFVYGLVRIGDKVKKGQPMAVLTKEAIPVGTTASASMGVPVPASLTGFVRGLIRDGYYVPQGFKMADIDPRDDERENCFTISDKARNLGGAVLTALLWMGRGDV
>NZ_CP027569.1|WP_027895529.1|1160237_1162928_+|selenium-dependent-xanthine-dehydrogenase
MSELCKLWVNNHEIEADGDRKLIDVLRNDLRLKSVKDGCSEGACGTCTVVIDGKATKTCVQKVSRMAGKHVLTVEGLSQREKDVFVYAFGEAGAVQCGFCIPGMVMCGKALIDANPAPSRLEIAAAIRNNICRCTGYKKIIDAIAMAADLLRTGQAIPVRGGYRGVGDPCQRINVKAKVLGIGKYTDDLDAVDLPGMCYGSAIRSAYPRAVVKAIHAEKAKALPGVICVLTADDIPGSVKVGHLKTDWDTLIPVGSTTHFLGDAIALVAAETPEILEQAKKLVDIEYEELPPLTCAADALKEGAPLVHPSAGTNILAHEHLVRGDADAVIAASKYKVTHHFETPWTEHAFLEPECAVAMPFDDGVFIYSSDQGIYDTRRETALMLGLPEDKVIVENCFVGGGFGGREDVTVQHLAALVAYVCKRICKVKLTRQESILIHPKRHQFSMDLTTACDEKGKLTAMKLVAVTDNGAYASLGGPVLQRACTHAAGPYNYQTIDIDGTAVYTNNPPAGAFRGFGVTQTIFATELNLNKLAELVGIDPWEIRYRNAIRPGQVLPNGQIADPSTGLAETLDAVKDVYYHSGPYVGIACALKNSGVGVGLPDYGRCRLVVKENMVHIYSSASCIGQGVGTVLVQMVSQAAGLPIEDIKWHMPNTATAPDAGTTSGSRQTTLTGEAARRAAVQLRRDLFAAKGLPYEETSHASDYLEGVTVEKESPATAAVRFNRSDLDVLNGREYVGEYLGKTDKMGADVPHPVSHVAYGYATHVCILNEDGTIRKMVAAHDVGRVVNRKSLEGQIEGGTIMGCGYALTEQYPLDHCKPTAKFGTLGLFRADKAPDVEAIPIEKEGVDVAYGAIGVGEITSIPTAPAVAGAYYKWNGQFQTTLPLEGTPYSRKKK
>NZ_CP027569.1|WP_027895530.1|1158833_1160225_+|dihydropyrimidinase
MDYVIKNGTVCLEGEHFRADVTVREGKIQALGKAVHNGHETVIDADGLYVCPSGIDAHTHMALQQSPKYRACDDFYSGGVAAACGGTTTILDHMAFGPAGCSLRYPFAQYKKLAAPCPVDYSFHGVIQHVDDQVLRELGQLIDEGFPSFKAYTTYGYPVGERELMQLLPVIKKHGGLLTVHAESDGITNALRDSLGPQDLQPIGQARTRPNAAEASAVANVLAAARACGDAPVYIVHTSAHESLDQIRLARRQGQRHIYSETCPQYLVLTEDKFRQGGPLEGIKYMLAPPLRKEEDNRALWQALAEGTVQTVATDHCPFTIAEKQENVSDFRQCPGGVSGVEERMPLLFSEGVLKGRLTLERFVQVTSANVAKIFGLYPRKGTLLPGSDADLVLIDPKGERTFAKENLHTTCGYSPYEGMTVRAMIRLTMLRGEIIVKDNQFCGKRGYGTLLHRSAMKDNLDH
>NZ_CP027569.1|WP_027895531.1|1156305_1158816_+|putative-selenate-reductase-subunit-YgfK
MSDRMTSIPFGKLMNWVLTEAPTGTIFGVHHHVQADPERTYHIFDRPLEMPFGPAAGPHTQLAQNIVAGYVAGARFFELKTVQKIDGEDLPVPKPCIKADDECYNVEWSTELTVPKALEEYIKAWFLVHVMAVEYGLGSPDGMQFNMSVGYDLAGIQTAKIDSFIENLKDASHTAAFADCKAWLLAHLDRFQKLRREDVEAIPAAICNSVTVSTMHGCPPDEIERIARYLLKEKHLNTFVKCNPTLLGYDFVRHCMDDLGYGHMVFDDSHFKADLQYEDAVPMLKRLQEAGRAEGLVFGVKLTNTFPVDITRHELPGTEMYMSGKPLFFLAMNVAKKLSEAFGGTLPISYSGGADAHNIGDIVQTGIWPVTVATTLLKPGGYERFAQLAQCFEGKMGQSFTRVNVDALDALLTKAKGDAHYARLDPKAQQRKNDQALPMMDCFMAPCSQTCPIHQDIPAYMDLVAAGKYDQALQIILEKNPLPFTTGTVCYHTCMNSCTRNFCDDPVEIRRNKLIAAEKGYADVMTALQAAPSNGKKAAVIGAGPAGLSAAYFLARGGFDVTVFDKNDEPGGLVRTFLCEKKGQISPEAIDRDVALIEKMGVHLVVGKAIASLDELQGYDVILAACGVKGKIGDTPASAIDGLTIIGDGHYGKTTSVVECIADGQKAAEAILGQLTSVDTLIPADVNDVYSCRGLLEAAPETGCDGRCLHCDSVCEACVEVCPNRANVAIAVPGHMQAQILHVDYMCNECGNCRTFCPWGGAPYKDKFTLFANEEDLEHSDNQGFVVIDKVSGFCKVRLDGEIRSTTLGTADEAIPEDIRTFMETVCRDYGYLLIE
>NZ_CP027569.1|WP_027895532.1|1154954_1156292_+|putative-aminohydrolase-SsnA
MLIVGNGHVITRDAKNQYFPDGAVAIDGTKICRVGQTAEIRRAFPDADFIDAKGGVIMPAFINTHEHIYSAMARGLNINGYAPKGFLDILDGLWWNIDRHLTNDLTYLSAMETYVECIKNGVTTVFDHHASFGEIKDSLFAIGQAAQELGVRSCLCYEVSDRDGQDKARQAVLENEAWIRHAQADTTDMLAGMMGMHAQFTISDETMALAAEHKPDGVGYHIHVAEGIEDLQDCLKKHGKRIIDRLYDWNILGPKTLLGHCIHVNPHEMDLIKETDTMVVHNPESNMGNACGCPPTMDMVHRGILTGLGTDGYTHDMIESYKVANILHKHHLCDATAAWTEVPQMLFYNNAVIANRYFKAPLGVLAEGAAADVIVMDYIAPTPMNEENINGHILFGMNGHDVVTTIANGKVLMENRQLTGVDEEALMAKIREGAATLAGRINGYL
>NZ_CP027569.1|WP_014015567.1|1153973_1154612_-|transcriptional-regulator
MLDDVVLNFLRHLAKGLADQFGPNCEVVIHDLSDNYKENSIVAIENGHVTNRKVGDGPSMAVLDALRSEPDKLQDHTSYLTKTKDGRILKSTTIYIRNENQKVIGIFSINYDITELMMVENAIKPLISVASKEEQVSPIPQNVTDLLNELIEESTRQVGKPVPLMTREDKIKAIKFLNDRGALLITKAGDKISKHFGISKYTLYSYIDSSEE
>NZ_CP027569.1|WP_027895533.1|1152487_1153696_-|diaminopropionate-ammonia-lyase
MKKDMKWAMNHLPKSDDKNLPIMSLNEIAKARTFHQSFPQYSETPLTQLTQMARYLGLGSIFVKDESYRFGLNAFKVLGGSYSMAKYIAKETHRDVSDLPYEVLTSDKLRQEFGQATFFTATDGNHGRGVAWAAQKLGQKAVVHMPKGTTQTRLENIKKLGADVDILDLNYDDCVRQAAKEAAATPHGVMVQDTAWDGYEEIPSWIMQGYGTMAMEAGEQLKAQGVERPTHIFVQAGVGSLAGAVVGYFANLYKDNPPKFIVVEASAAACLYKGAAAGDGKPRIVGGDLDTIMAGLACGEPNTISWDILKNHVTTFVAADDPITVRGMRMLAAPIKGDAPIVSGESGAVPFGTLATIMLSDECKDIRAELGLDERSQVLVFSTEGDTDPERYKNIVWRGLNK
>NZ_CP027569.1|WP_027895534.1|1151135_1152455_-|YgeY-family-selenium-metabolism-linked-hydrolase
MTVPYEKIKEAAKGYEQDMTRFLRDIIKFPGESCGEKEHIDRIAEEMRKLDFDKVEIDPMGNVLGYMGTGKTLIGFDAHIDTVGIGNKANWNFDPYEGFESETEIGGRGTSDQLGGIVSAVYGARIMKDLGLLSDKYTVLVTGTVQEEDCDGLCWQYIINEDKVRPEFVVSTEPTDGGIYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIYKMADILQDVRALNENDAADTTEIKGLVKMLDKKYNPEWEEANFLGRGTVTCSQIFYTSPSRCAVADSCAVSLDRRMTAGETWQSCLDEIRALPSVQKYGDDVKVSMYEYARPSYTGLTYPIECYFPTWVIPKDHKVTKALEEAYTSLFGDSRIGAAETEAMRKARPLTDKWTFSTNGVSIMGRNGIPVIGFGPGAEAQAHAPNEKTWKQDLVTCAAVYAALPSVYTDK
>NZ_CP027569.1|WP_027895535.1|1149907_1151101_-|knotted-carbamoyltransferase-YgeW
MKTLQDYIDKLNALNFKDMYENDFFLTWDKTDDELEAIWVLADALRFMREHNISTKIFESGLGISIFRDNSTRTRFSFASACNLLGLQVQDLDEKKSQIAHGETVRETANMISFMADVIGIRDDMYIGKGHTYQKEVVDSVTQGYKDGILEQKPTLVNLQCDIDHPTQCMADAAHIIHEMGGLENLKGKKIAMTWAYSPSYGKPLSVPQGVIGLMTRLGMDVVLAHPEGYEVMPDVVDVAKKNAEKSGGSFRITHDMADAFKDADVVYPKSWAPFAAMEKRTNLYAAGDQSGIDALEQELLAQNAQHKDWCCTEELMKTTKDGKAMYLHCLPADINGVSCEDGEVEASVFDRYRDSLYKEASYKPYVIAAMIMLAKCQDPAQTLKALEERGILRKMK
>NZ_CP027569.1|WP_036220648.1|1165669_1166125_+|hypothetical-protein
MLPERKNIRLPYYDYHTNGMYFVTVCTKEKEHLFGEIIDGEMHMNAMGKYVARQLQSIDERYFDVQMICFIVMPNHIHGIIGLSGNHAPSLGRVVNKFKGLISHKYGRTIWQRGYFEHVVRSERDFLKIWEYIENNPVNWQLRRQAVREKE
>NZ_CP027569.1|WP_027895526.1|1166544_1167759_-|molybdopterin-molybdotransferase-MoeA
MEIVTITEARRRLDGALPSYKANIEYITPGQALGRITARDITAAQAYPPYRKSPFDGYAIHSYGQKDYEVIATIGAGVVYDGPVAAGQAVRLMTGCAVPDDCDTVIPQEYVNRHGARMEVTESVAQGSNIIPIGEECKPGAVIIPAGTKLTAGALSVAVGLGNYRLPVYVKPQVLFLTSGRELVMAGEKRHAGQIYNSNAYLFQSLLEQYGAEVTFYHVSDGPDQLAAEMAAVRRLAQDKDLIVSTGGVSVGLYDTMPQIYEALGAIQLYNRITMRPGSASYGGVIDDNGHRILILGLSGNPSASFNAFHLLAVPILRRLNGEKDWEFPRITCRLVDGIHKENPVDRFVQGRLTYEQGQPVFTPNTTLTSSALLGLAHTNALAYIKKGTPTLTAGATVEALLLE
>NZ_CP027569.1|WP_027895525.1|1167761_1168322_-|4Fe-4S-dicluster-domain-containing-protein
MFKHVKTDPELCIGCKTCMAACVASHTGKALFALKPKSFDFTPRVHVVYTSKVTKAVQCQQCPKPRCMEACPFHCISLGPDSVVIDEDACRGCGKCSRACPFQAINMTKIDHGDTKGRPFRIVAYKCDLCAHTETGEPACIPACPTEALSLFDPAVAAAQRAKLKAAKNAAKEKAAYEKALKKGNP
>NZ_CP027569.1|WP_080712313.1|1168325_1170518_-|formate-dehydrogenase-subunit-alpha
MCAYKKIDTVCPYCGTGCVIACTVDTEENRVIEAKGSPRGVNNEGRLCLKGLYGWDYLNDPQILTKRIRKPMIRKNGKGTPLVEVSWQEAIEYAATRLKAIIKEYGPDAVMGAGSARGPGNEAAYITQKFMRAVVGTNNVDHCARIUHAPSVTGLGESVGEGAMSFSVPELEDAEVIFDIGYNAPVSHPLVARHIVRAKKKGCKIICVDPRLTETGRIATIYLPIKGGTNMLFLNAMAHVIVTEDLVDHDFIEKHTTGFADYAKEVAQEKYAPEAVAAATHLDPGDIRRAARLFASSKHTMTLWGMGITQFSQGVECVIACSNLSLMTGNYGHYATGVGPVRGQNNVQGTCDMGVLPNQYPGYQDVTDDAIRHKFERAWGVSLPAHVGLPLTYVPDKVLREPDPKKRIHAYYIIGEDPAQSDPDLPEIRRTLSAIDLVIVQDIFFNKTCEYADVVFPATAWGEHNGVYTACDRRFQRVRKLIEPQPGCKTDWEILCLMATAMGYPMHYDNTEQIWDEMRSLCPKFAGASYEKMVENHGVQWPCTEDSPDDTGTQYLHKDAQFATADGKGHFYYYPWTSAKELESPEYPLSLSTVREVGHYSVRTMTGNCRLLADLADEPGYIQMNPEDCQELGIDNGDLVRVVSKRGHTITRCQETDRVSKGATYMTYQWWIGACNELTSAALDPKSHTPEFKYCACRVEKIDDQKQAERDVKAQYAAIRARMGIEVKEV
>NZ_CP027569.1|WP_027895522.1|1170638_1171667_-|NTP-transferase-domain-containing-protein
MSKTRRSPSLGLIVLAGGLSTRMGRDKAGLPWHDTDLLTDLLLRSQAYPFSERIIAINRPYTPHELPAKLVRTVHLVADSYPGCGPLGGLEAALHSGTSAFYLVLSVDLPFYNFAPVPDLVKLLRHQPDLLAVIPRTENKQDQPLAALYSRQLLPAVADHLQKGEYRLRRLYQAVPAAYVDESFRPALYLNINTPEAYEAAKGRDANSCRQVPVVTLTAPDSGDGKTTAATAAIAELTRRGYQVAYIKSTHHIVTRQKIGSDTDRAQKAGAVSVCLCGPADVPEGLSKEDYILALSQQQLADLVLVESRSHGPFPRIDVTQADTGTLVDDILFLTGYRSSAI
>NZ_CP027569.1|WP_014015579.1|1171830_1172208_+|LysR-family-transcriptional-regulator
MAKEKLHCKVTLCLLGDKRAFGPGVAELLDGVRRHGSLQGAAREMAMSYSKAWTIMRNAEAIWGFPLIRRYVGGKDGGRSVLTRQAEIILARYEQMDEALHAMADRQFQQWFNDDELQKLQTMEG
>NZ_CP027569.1|WP_027895521.1|1172214_1173234_+|molybdopterin-binding-protein
MKMMKTEEAVGHVLCHDITQIIRGVTKGPVFRKGHVITKEDIPVLLSVGKDHVYIWEKDDTLLHEDEAAAILRDICLGTNMHGSEPKEGKIELIADCDGVLTIRRDGLKAVNSLGEMMIATRHGGFPVRKGDKLAGTRIIPLVIKKDKMAAAKEAAGPAPLLDVHPFGQKKAGVVTTGNEVFHGRIEDTFTPVIESKLAEYGAVMAMHTTLADDPAAITAAIQDMLAQGMDMVFCTGGMSVDPDDQTPLAIKNTGARMVSYGAPVLPGAMFLLAYAGDGRPIVGLPGCVMYAKRTIFDLVLPSLIADVPVTAEDLAGLGEGGLCLNCPVCTFPNCGFGK
>NZ_CP027569.1|WP_080712312.1|1173242_1173740_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MNKFTHIDSKGDAVMVDVSGKTITARTAVACGRIAMSRDCYEAVKAGAMKKGDVLGVARIAGIMGSKRTSDLIPLCHILNLTKCGVEFIFHDDLCEIEGRCTVKCDGKTGVEMEALTGVSVALLTVYDMCKAVDKRMCIKDIHLVEKIGGKSGHFQYDGGEHYEG
>NZ_CP027569.1|WP_027895519.1|1173729_1174707_+|GTP-3',8-cyclase-MoaA
MKDKWGRTIDYLRLSLTDRCNLRCRYCMPEALASVGHDAVLRYEEMLLICRAALALGIDRFKITGGEPLVRKGAVAFMKALKEMDGVRSVTLTTNGLLLSEALPDLVRMGIDGINISLDSLDERQYASLTGGGELSVVRQALEQAAAQCVNVKVNAILLAETRDQILPLAELARTYPIDVRFIELMPIGFGTTLAGLSEAETLSLLVRAYPDLAATGERRGNGPASYYQSRYLQGRIGFIAANTHAFCASCNRLRLTSTGFLKPCLCYDDGVDLRPLVRSGQGEDAICQALQHAIAQAVHEKPAKHCFGEQDHISEHKTMNQIGG
>NZ_CP027569.1|WP_027895518.1|1174712_1175648_+|MOSC-domain-containing-protein
MGKVHAVCISTIRGIAKQAVPEGKFVVNWGIEGDAHAEHWHRQVSLLGLECIEAFRRRGGQVEFGAFGENLVVDGFHFSSLPVGTLLRCGDVLLEITQIGKECHNHCAVYEAVGDCIMPREGVFARVLEGGLIRPGDVMEEVPRQGKRPYQAAVITLSDKGSKGLREDASGPVIVKRLEQAGFEVIEQLLLPDGKGPLEQQLCRLADQRQADLILTTGGTGFGHRDVTPEATLAVADRQAPGIAEAIRAASMQITPRAMLSRAVSVIRKKTLIINLPGSPKACQECMDVFLDTIPHGLDLLRGEVRDCGRK

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Crispr_ID: NZ_CP027569_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_3

1599955-1602238

TypeIII

Consensus_repeat	Method
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	PILER-CR
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CRISPRCasFinder
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CRT

31 spacers

cas14j,cas6,csx1,cas10,csm3gr7

The CRISPR arrays of NZ_CP027569_3

>merge|NZ_CP027569|3|1599955-1602238|PILER-CR,CRISPRCasFinder,CRT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAACATGAAGAAAAAGTTCGAAGAACGTCCACCAGTAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAACGTTCCACTTCTTTTTTGAAGATGCTACGGTTCACTGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACGCATTCTTAAACTTCTCAACAGAATGTAACTGTTCAGCAAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAAATGTTATGGCCCTGATAGCTTACATTCTTTCTTGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACTTAGTTACTAATGCTAACGATGATGACCAGGAGGGGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACGGTCGGAAAGTTGTACAATTTTTCGTAAAGCCGGATTTCACGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACCTATTATAGTATATAATTACTCCAAAGTTTAGTATAGCAAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACATACCTAAGAAAATGGCCAGAGCGTAAACCATGCAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACATTATAGTATATAATTTCCCAAGATTTTGCTTAATAAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACCCAGTCCATGAGGAAAGGAGGGTTTGAAAACGTGGTTGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACTCCTGAAGCTCCATTTCTTCTAACGAAGTAAGCTTACGGGTTCGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACCGGTTCAGGGGGATAATTGTAATCCCTCTTCAGCTGGGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACCTTCTGGCAATTTGTAGATGATATTTTCAGACTTGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAACCGTATCCTTTATCCTGTTTTCCTTCCCAGGCGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACCCAATCGGGAAAATCTCTATTACTTTTATAGATTTCGTCGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACACAGATTCGAGTTCTTTAAACATAATAGCCTCGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACTGCAAGTGGTGCAGCTCTCGGCGCTTTTCTTGGTGGGGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACTTCCGTCATCGACGATAAAACAATTATTCCAGGTAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACTTGTTCTAAGACCTCGTTTCTGACAAGTTCTTCTGAAACGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACTATTCCTAATAAGCTTAATATTAACGGAGGGAGAAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACACCATCTGGTCTGTTGCATCTTCAAAGACTTTATTCCCCTCGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACCATCAATACCAAATGCATGAGAAATTGGATCATTGACGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACGCCACCGTCAGGACTTCGCCATCAAGCTGAACGATGTTCAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAAACTGCGAATACGTTTCCATTCTCAACCAAGGAGTGGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAGGTTTTATTTTATAATTATTTAGATTAGATATTGGTGAAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACGAGGGGATTCAAAGGGGAAATCCACAACAAAGGAGGTGGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACTTAAAGAGCCATTGTTTATTCACCTCCTTTTCTAAAAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAAATTGTTCTCGAAAAGCTGTCTTTAAGTTCTTCCGGAATGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACCCAAGCAGGAATCCACCACAAAATATCGCTATGGCAATCAAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAAATACTTGGCCACGCATTTAACGACGTTCTTTATTTCGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAAATACTTGGCCACGCATTTAACGACGTTCTTTATTTCGTGTTAATGGCCTTACCCCATTAGGGGACGGAAAAG

>NZ_CP027569|3|1|1599955-1602237|PILER-CR
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATGAAGAAAAAGTTCGAAGAACGTCCACCAGTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AACGTTCCACTTCTTTTTTGAAGATGCTACGGTTCACT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GCATTCTTAAACTTCTCAACAGAATGTAACTGTTCAGCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATGTTATGGCCCTGATAGCTTACATTCTTTCTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTAGTTACTAATGCTAACGATGATGACCAGGAGGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GGTCGGAAAGTTGTACAATTTTTCGTAAAGCCGGATTTCAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CTATTATAGTATATAATTACTCCAAAGTTTAGTATAGCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATACCTAAGAAAATGGCCAGAGCGTAAACCATGCA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATTATAGTATATAATTTCCCAAGATTTTGCTTAATAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAGTCCATGAGGAAAGGAGGGTTTGAAAACGTGGTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TCCTGAAGCTCCATTTCTTCTAACGAAGTAAGCTTACGGGTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CGGTTCAGGGGGATAATTGTAATCCCTCTTCAGCTGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CTTCTGGCAATTTGTAGATGATATTTTCAGACTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AACCGTATCCTTTATCCTGTTTTCCTTCCCAGGC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAATCGGGAAAATCTCTATTACTTTTATAGATTTCGTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ACAGATTCGAGTTCTTTAAACATAATAGCCTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TGCAAGTGGTGCAGCTCTCGGCGCTTTTCTTGGTGGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTCCGTCATCGACGATAAAACAATTATTCCAGGTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTGTTCTAAGACCTCGTTTCTGACAAGTTCTTCTGAAAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TATTCCTAATAAGCTTAATATTAACGGAGGGAGAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ACCATCTGGTCTGTTGCATCTTCAAAGACTTTATTCCCCTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CATCAATACCAAATGCATGAGAAATTGGATCATTGAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GCCACCGTCAGGACTTCGCCATCAAGCTGAACGATGTTCA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAACTGCGAATACGTTTCCATTCTCAACCAAGGAGTG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AGGTTTTATTTTATAATTATTTAGATTAGATATTGGTGAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GAGGGGATTCAAAGGGGAAATCCACAACAAAGGAGGTG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTAAAGAGCCATTGTTTATTCACCTCCTTTTCTAAAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATTGTTCTCGAAAAGCTGTCTTTAAGTTCTTCCGGAAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAAGCAGGAATCCACCACAAAATATCGCTATGGCAATCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATACTTGGCCACGCATTTAACGACGTTCTTTATTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATACTTGGCCACGCATTTAACGACGTTCTTTATTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAA

>NZ_CP027569|3|3|1599955-1602238|CRISPRCasFinder
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATGAAGAAAAAGTTCGAAGAACGTCCACCAGTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AACGTTCCACTTCTTTTTTGAAGATGCTACGGTTCACT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GCATTCTTAAACTTCTCAACAGAATGTAACTGTTCAGCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATGTTATGGCCCTGATAGCTTACATTCTTTCTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTAGTTACTAATGCTAACGATGATGACCAGGAGGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GGTCGGAAAGTTGTACAATTTTTCGTAAAGCCGGATTTCAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CTATTATAGTATATAATTACTCCAAAGTTTAGTATAGCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATACCTAAGAAAATGGCCAGAGCGTAAACCATGCA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATTATAGTATATAATTTCCCAAGATTTTGCTTAATAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAGTCCATGAGGAAAGGAGGGTTTGAAAACGTGGTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TCCTGAAGCTCCATTTCTTCTAACGAAGTAAGCTTACGGGTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CGGTTCAGGGGGATAATTGTAATCCCTCTTCAGCTGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CTTCTGGCAATTTGTAGATGATATTTTCAGACTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AACCGTATCCTTTATCCTGTTTTCCTTCCCAGGC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAATCGGGAAAATCTCTATTACTTTTATAGATTTCGTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ACAGATTCGAGTTCTTTAAACATAATAGCCTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TGCAAGTGGTGCAGCTCTCGGCGCTTTTCTTGGTGGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTCCGTCATCGACGATAAAACAATTATTCCAGGTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTGTTCTAAGACCTCGTTTCTGACAAGTTCTTCTGAAAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TATTCCTAATAAGCTTAATATTAACGGAGGGAGAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ACCATCTGGTCTGTTGCATCTTCAAAGACTTTATTCCCCTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CATCAATACCAAATGCATGAGAAATTGGATCATTGAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GCCACCGTCAGGACTTCGCCATCAAGCTGAACGATGTTCA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAACTGCGAATACGTTTCCATTCTCAACCAAGGAGTG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AGGTTTTATTTTATAATTATTTAGATTAGATATTGGTGAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GAGGGGATTCAAAGGGGAAATCCACAACAAAGGAGGTG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTAAAGAGCCATTGTTTATTCACCTCCTTTTCTAAAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATTGTTCTCGAAAAGCTGTCTTTAAGTTCTTCCGGAAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAAGCAGGAATCCACCACAAAATATCGCTATGGCAATCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATACTTGGCCACGCATTTAACGACGTTCTTTATTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATACTTGGCCACGCATTTAACGACGTTCTTTATTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAAG

>NZ_CP027569|3|1|1599955-1602237|CRT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATGAAGAAAAAGTTCGAAGAACGTCCACCAGTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AACGTTCCACTTCTTTTTTGAAGATGCTACGGTTCACT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GCATTCTTAAACTTCTCAACAGAATGTAACTGTTCAGCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATGTTATGGCCCTGATAGCTTACATTCTTTCTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTAGTTACTAATGCTAACGATGATGACCAGGAGGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GGTCGGAAAGTTGTACAATTTTTCGTAAAGCCGGATTTCAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CTATTATAGTATATAATTACTCCAAAGTTTAGTATAGCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATACCTAAGAAAATGGCCAGAGCGTAAACCATGCA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ATTATAGTATATAATTTCCCAAGATTTTGCTTAATAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAGTCCATGAGGAAAGGAGGGTTTGAAAACGTGGTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TCCTGAAGCTCCATTTCTTCTAACGAAGTAAGCTTACGGGTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CGGTTCAGGGGGATAATTGTAATCCCTCTTCAGCTGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CTTCTGGCAATTTGTAGATGATATTTTCAGACTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AACCGTATCCTTTATCCTGTTTTCCTTCCCAGGC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAATCGGGAAAATCTCTATTACTTTTATAGATTTCGTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ACAGATTCGAGTTCTTTAAACATAATAGCCTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TGCAAGTGGTGCAGCTCTCGGCGCTTTTCTTGGTGGG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTCCGTCATCGACGATAAAACAATTATTCCAGGTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTGTTCTAAGACCTCGTTTCTGACAAGTTCTTCTGAAAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TATTCCTAATAAGCTTAATATTAACGGAGGGAGAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ACCATCTGGTCTGTTGCATCTTCAAAGACTTTATTCCCCTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CATCAATACCAAATGCATGAGAAATTGGATCATTGAC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GCCACCGTCAGGACTTCGCCATCAAGCTGAACGATGTTCA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAACTGCGAATACGTTTCCATTCTCAACCAAGGAGTG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AGGTTTTATTTTATAATTATTTAGATTAGATATTGGTGAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	GAGGGGATTCAAAGGGGAAATCCACAACAAAGGAGGTG
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TTAAAGAGCCATTGTTTATTCACCTCCTTTTCTAAAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATTGTTCTCGAAAAGCTGTCTTTAAGTTCTTCCGGAAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CCAAGCAGGAATCCACCACAAAATATCGCTATGGCAATCAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATACTTGGCCACGCATTTAACGACGTTCTTTATTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AAATACTTGGCCACGCATTTAACGACGTTCTTTATTTC
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_027894883.1\|1592513_1593017_+\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP027569.1\|WP_036203056.1\|1606189_1607305_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP027569.1\|WP_027895898.1\|1608750_1609539_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|227838
NZ_CP027569.1\|WP_106669711.1\|1605570_1605849_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_014016003.1\|1594334_1595069_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|234640
NZ_CP027569.1\|WP_051525016.1\|1613643_1614324_+\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NZ_CP027569.1\|WP_027894878.1\|1599452_1599731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_051525017.1\|1607945_1608773_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP027569.1\|WP_027894879.1\|1597261_1598602_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_022497505.1\|1595354_1595597_+\|DUF1858-domain-containing-protein	unknown	unknown	gnl\|CDD\|274898
NZ_CP027569.1\|WP_027895896.1\|1610288_1611965_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027894880.1\|1596225_1596786_+\|hemerythrin	unknown	unknown	gnl\|CDD\|226454
NZ_CP027569.1\|WP_014016002.1\|1593747_1594320_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|378317
NZ_CP027569.1\|WP_027895897.1\|1609625_1610261_+\|hypothetical-protein	csx1	cls001403_csx1_CAS-III	unknown
NZ_CP027569.1\|WP_051524950.1\|1598666_1599191_+\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|276807
NZ_CP027569.1\|WP_155266584.1\|1611970_1613647_+\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|274208
NZ_CP027569.1\|WP_027894881.1\|1595612_1596206_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|172761
NZ_CP027569.1\|WP_106669710.1\|1602717_1602996_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_051525018.1\|1607504_1607798_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_022497506.1\|1593013_1593751_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_027894883.1\|1592513_1593017_+\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.01915e-56
NZ_CP027569.1\|WP_036203056.1\|1606189_1607305_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.41848e-57
NZ_CP027569.1\|WP_027894881.1\|1595612_1596206_+\|hypothetical-protein	gnl\|CDD\|172761	PRK14273, PRK14273, phosphate ABC transporter ATP-binding protein; Provisional.	0.00263206
NZ_CP027569.1\|WP_014016003.1\|1594334_1595069_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|234640	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator.	8.54828e-145
NZ_CP027569.1\|WP_051525016.1\|1613643_1614324_+\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	9.25431e-17
NZ_CP027569.1\|WP_155266584.1\|1611970_1613647_+\|hypothetical-protein	gnl\|CDD\|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	5.88787e-06
NZ_CP027569.1\|WP_022497505.1\|1595354_1595597_+\|DUF1858-domain-containing-protein	gnl\|CDD\|274898	TIGR03980, conserved_hypothetical_protein, hybrid cluster protein-associated redox disulfide domain. Members of this protein family resemble the domain of unknown function DUF1858 described by pfam08984, but all members contain an apparent redox-active disulfide. In at least one member protein, a cysteine in the CXXC motif is substituted by a selenocysteine. Most member proteins consist of this domain only, but a few members are fused to or adjacent to members of the hybrid-cluster (prismane) family or the nitrite/sulfite reductase family. [Energy metabolism, Electron transport].	2.45056e-22
NZ_CP027569.1\|WP_027894880.1\|1596225_1596786_+\|hemerythrin	gnl\|CDD\|226454	COG3945, COG3945, Uncharacterized conserved protein [Function unknown].	4.33289e-29
NZ_CP027569.1\|WP_014016002.1\|1593747_1594320_+\|RNA-methyltransferase	gnl\|CDD\|378317	pfam09936, Methyltrn_RNA_4, SAM-dependent RNA methyltransferase. This family has a Rossmanoid fold, with a deep trefoil knot in its C-terminal region. It has structural similarity to RNA methyltransferases, and is likely to function as an S-adenosyl-L-methionine (SAM)-dependent RNA 2'-O methyltransferase.	5.28217e-108
NZ_CP027569.1\|WP_051524950.1\|1598666_1599191_+\|sel1-repeat-family-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	3.09261e-26
NZ_CP027569.1\|WP_027895898.1\|1608750_1609539_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	4.13374e-14
NZ_CP027569.1\|WP_051525017.1\|1607945_1608773_+\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	0.000373347
NZ_CP027569.1\|WP_022497506.1\|1593013_1593751_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	7.84376e-144

>NZ_CP027569.1|WP_027894878.1|1599452_1599731_+|hypothetical-protein
MKKLNVKNNVFLIARESWKGSRKLDYYLILKNGKKYYAFSREYSRRCHTLCQGATPINTILKIREHNKAVMNLKKYLERMMPFLIEYYGISA
>NZ_CP027569.1|WP_051524950.1|1598666_1599191_+|sel1-repeat-family-protein
MDRSEQTKKNQAINLYTWGLELLSDGGHVRDADKVGWMLIENAATQGDRDAQNYLGDAYFYSYKKDEKAAFWYTKAAEQGLPEAQAMLGMLYLLGRGVTRNYAKARHYFEQALQGGELNVEAAVAQYWLGQMYKEGIGVPKDREKGKKLIHLAAINGYAPHGTPQEIRKQMGEK
>NZ_CP027569.1|WP_027894879.1|1597261_1598602_+|hypothetical-protein
MKQIDIVQAQQDIQFIYNCYKHFGLDVDECRAVLKERDCCEHRDSDGHLLFDEASSLTMIDSAKNCHDTYICKKCQTVFSLKIDPDTHEYSYNEVLRYNSLDDLLKLDFIAHIEKSYHILDRMQQFTPKDVTFFHNNLKIQAELLQRETRRQTAILEKLDHITLDLPYYDDFSAKHIRSILFPLYKQMTFRTFWVMSFSVPIFDTLDYYDCTVNLLDDIPELNMDEALMLIEDCFKKAGTTLLESRRRYAWEPVCNHRDEQGNLLIHNLPNMVQTVECERCHAVFALNFNEQLGKYIHGYLLDDRHFYDFERAGVAEKAEAVLEKDRLSNVHSLTDYYHMREELNEQYQAVMEDKMACWELVGRLNTCLLEIDGLNTFTRHQVEDSVLYAQKEMIDRYLWQHEIQKQLKARLKEFCTLPSLKYPWYNKKNTKTEDTEKGKLLHGTF
>NZ_CP027569.1|WP_027894880.1|1596225_1596786_+|hemerythrin
MYCTEVMVKQHANISRMLKIIKEICCGILEGAEIDQKEFAEILDFIRRYADGHHHRREELVLFPEMVDHLEEVASIIIKHGMLVEHDLVRAHVRALDEALKLYAQEPKTEYKLQVLTEAMAYANRLQQHVEKENNVVYPLADRGLSDDIKNKIDTTVHEMEAEEGPDFAKGYMDLLDRLEKKYKIA
>NZ_CP027569.1|WP_027894881.1|1595612_1596206_+|hypothetical-protein
MSAFLGPIHFWLYNKIQFQESLIDELIRYASSQGWSDGDLADKYGSKDRRKLDEVIDESNIHGWLQSRIHDAEGRYAALVLDVAGNQEDRLTALKKAAYDFGASQHLSAATAPEAFHRLDDLLLDGMPCDQVNRVRESDDNRIAWDRTMDLHSEFWQGHGDCYYALRQALVDGLLAATDYAFTSPAEGQYEIVKKSA
>NZ_CP027569.1|WP_022497505.1|1595354_1595597_+|DUF1858-domain-containing-protein
MLKSVLNKFAANEKVTSDMIMGDIIRLHPEVVDTLIGQGMHCLGCPSSQQESLANACFVHGLDPEIVTKAVNVAIEANKQ
>NZ_CP027569.1|WP_014016003.1|1594334_1595069_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MSGHSKWANIKRKKGKNDAIRGKITTKIGREITIAVRMGGPDPVGNMRLKLALQKAKENNIPKDNIKRAIQKGAGATEGQNYEEIVYEGYGPAGVAVTVNVLTDNRNRAAAAVRHEFSKSGGNLGATGCVSWMFHNTGIFVVNRDQADEDQIMEVALDAGADDVKVSDEDYEIITTPEAFDAVEKALADNNIETEHASITMVPENTIKLTGEDAEKMERFVDALDELDDVQDVYHNAELPEEEE
>NZ_CP027569.1|WP_014016002.1|1593747_1594320_+|RNA-methyltransferase
MTSPLYVGLVHYPIYDKNFNVIATAITNYDLHDISRSAKTYGVKKYFIIHHIPGQLDMVHKIMDFWESPVGRNYNGYRTQAFDIVDIRPSIEAAVEAVTTAEGKKPYVVTTDARTYANTISYKDLRHKREEDDTPILLLFGTGYGMTKETMEKFDFILEPIYGAGEYNHLSVRSAAAIILDRLAGEDWWK
>NZ_CP027569.1|WP_022497506.1|1593013_1593751_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRIDIISLFPEFIEAFFQHSIIGRARAAGLLDLDVTNPRNFTYDRHHMVDDTIYGGGCGMLMKTAPLYAAVEAVRRQVPRRRIIFMGPAGQTFTQAKARELATYDQLILLCGHYEGVDYRVEQDLADETISVGDYVLTGGELPAMTVTDAVARMIPGVLGAAAGAADDSFYSSLLEYPQYTKPAVFRGMAVPEVLRNGDHAKIDAWRREASLARTLELRPDLLQHCDLSPADQKILAKLKGAKKG
>NZ_CP027569.1|WP_027894883.1|1592513_1593017_+|16S-rRNA-processing-protein-RimM
MAELDLFTIGQIVAPHGVRGDVRIYPDTDFPKRFLKMKYGYINGKKYEVESARLHKRVVLMKFVGVDDRNAAELLVKKNLQVPREDLVPLKKGQHYIYDILGSAVYDLQGHELGKLTDVLRTGSNDVYVVTADDGRETLLAAIPDVIKSIDEGEKKIVVDPPEWVDE
>NZ_CP027569.1|WP_106669710.1|1602717_1602996_+|hypothetical-protein
MKKLKVKNNVFLIARESWKGSRKLDYYLILKNGKKYYAFSREYSRRCHTLCQGATPINTILKIREHNKAVMNLKKYLERMMPFLIEYYGISA
>NZ_CP027569.1|WP_106669711.1|1605570_1605849_+|hypothetical-protein
MKKLKVKNNVFLIARESWKGSRKLDYYLILKNGKKYYAFSREYSRRCHTLCQGATPINTILKIREHNKAVMNLRKYLERMMPFLIEYYGISA
>NZ_CP027569.1|WP_036203056.1|1606189_1607305_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MIVNKAYRYRIYPTTAQKMMFAKTFGCVRFIYNKMLSDRIDYYKETGQKLNNTPAQYKEDFPWLKEVDSLALANAQLNLNKAYSHFWNDSQHFGKPRFKSKKNSRASYSTNNQKGSVRIEGHKVKLPKVGWVKLCQHRPLPENSIIKTVTISKTPSGKYYISMLVEYENQVLPVIPKTFLGLDFAMHGLYVASDEEDAKYPDFLRKAEKRLAKAQQKLSKKQKGSHNREKQRLRVAILHEKVANQRRDFLHKKSRYLADRYDAIGIEDISVKAMAKRKKGGKFSFGKSVADNGWNLFTNMLEYKLAWQGKQLIKIDKWYPSSQLCHVCGYRTSETKDLSVREWNCPKCGSHHDRDKNAAINIREEARRISA
>NZ_CP027569.1|WP_051525018.1|1607504_1607798_+|hypothetical-protein
MKDDTNPSQAMVIPPSGEVARCEQKDVFMGIISGIPIYKSDLGDVKNLPDSQDDTIYLVSTPVAEKMKAVRDDLYVPAGFVRNERGQIQGCTFLAKH
>NZ_CP027569.1|WP_051525017.1|1607945_1608773_+|hypothetical-protein
MDKKNKDMSILGKEAYESKVALEALNRAGKCPQLKGHVHEILYKDSYNTNLKHLLEGKHAALTKSNTAQMKDIVVMKGSKVVGHAQLKDTISPGGVAKTIKQINSGHYNKTRVLGTEETVQKIGAKVNQKVSSSGISSNTTKRIADKALGKMPTVGAVGNALKSGGTSGAILGAGIETVTSIYDVATGEKDLDDAVIDVAAAGVRGGVVGAASSAAGSVAAGAAGTAVSAVAGTAAGTAIAGTAVGAAAVAAAPVVIGFAAACAVGSFISSLFDD
>NZ_CP027569.1|WP_027895898.1|1608750_1609539_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MNTLQTIKLKLAVPQGMRLNQSLGSVLQGVIMETIDTQYAAYLHQQNLRPYSQHCVFHAKSQTLDWYISALNTDASHKLLLPLLNMPDTVYLRQKQKAITIQQRTLIRDTTYEKLAENFFSKESLITNSPSTITFHFQTSTAFRRKGQYVVYPEIPLLITNLLKRWNTFSEMDFLNSSDIVPLLLEHPFEVIQYNLSMKYFSLEGTKIPAFQGNFSFKTDKNQTVRQILSLLATFAPYAGVGIKTAIGMGAVTTEINRQTNY
>NZ_CP027569.1|WP_027895897.1|1609625_1610261_+|hypothetical-protein
MRKVFLSNIFIQNLEKTVFKSDDFIISDETKYLCSLPYVIEDRVKEGDTVCIITGVNQSTDKQENKGKKNYEEIFKPEIRRSVEGKNVTLEFYEIPIMKHYDADAFNSFFRQVVELLQEGDILHLDLTWGLKPYTTSLFIASMYAENAGIDVKVDTVFYAHRYDGVDDGNHDKPSFIYDITSLYYLNSLAGHAKKGQRPMLDHILRFLIKE
>NZ_CP027569.1|WP_027895896.1|1610288_1611965_+|hypothetical-protein
MMDVKNTKSAEEQQKQLEDEIELLAKNIAEKRERLKVLMDSSDVWDAKLAQSIFSYNKLFAYFLTKLDEYAGKEGTDSFFKCFQADYLPRIKSLPAWDEEKGAENEKGDKKKISSVEIERTIQLLEGHLSVLQHLLNEVYNQRHSAQQKLVEKMAFEAAFRRYGFQVNGERALFSQLFVLYFNQSANEEFNKKLDKFREDKKAIYTVRLKINKDLISDIRNKLDYLSGKIIENQEMKQLTEEMQKEKSFLAADVFRKRFPKLYKLYAMYECDESNHIKNKALPRFDFKFNGYDGIMFYKILNDSCLKYNSQMVEYNDFLHMFNTYYKQRTQGISDVDRDNYEQMCDAISFYLDQVKRENKCKVSVPTIKNWKDETQHRVREWLKKDVHLLDKDIEECMEELKEISECSFAFFYNDKNDEKTNDAWDGKQAELQEEKERASAVILQAFYDVVEDEDIRERQRPLLKLYVGLRIEALGEFSQEQVLEFLSEDEIIAYKQYEQTNLAVYKKYEQQDKYENKLIAGFLVEYTGRKPDTIRKDIKKFDKVMWKRVKNNFISKG
>NZ_CP027569.1|WP_155266584.1|1611970_1613647_+|hypothetical-protein
MKVGAILLDTRSIQKYIFSCNKLQTNIGASYLVDAIFTKEMVDVLKDAGCTLPDITWQEYTAQKEKNKKLPDLMMVDHLDIDCEIAYIGGGNMLILLRDGGLNDDALRDKCRNLVSQWSRRVLLKAPGLKTGAAIDVVDILPGNFKQAIDSLYQQLKEHQNTILPCVDLPYTGLTLECDISGKVADVNSYKEDGSKRWISSEIIAKRNAYQDSRRQLEKDFLEENDGETPFAFPDELDQLGYKDKESYICVIHIDGNNMGVKFSHCRDMQERRALSLTVAQVVKDGFKALLDKEVKPLALAQDEKKYLSLKTTKYGKVLLPIRPIIIGGDDVTFICPGRVGLRYAQAFIKAVQSKKLLSKDLYTKINKELKAEGKEISKKMSCCGGIAIVPAKYPFYRAYELAEQLCGSAKKKSRQHDTNVVDFAVLHGQMAPELSQLESQTYEAPQGYLHYGPYAVDSTGENGTNLADLFALCQSMLDFSVPENKIKKLREVLQQDLHSQQLFLENSPKMRAILQQETGKEEVTAEDFWQDVDGQKKTRYMDAIEIMKFWIPEGGNK
>NZ_CP027569.1|WP_051525016.1|1613643_1614324_+|hypothetical-protein
MMKSFTIQIETLSPLHLGSGQENIVLDADVVYDQYGMPYFPARRFRGLLYESAMEMEEMSQADPIMSHSRLVALFGHQDETASQLRISNFYLGKPDQPGNTYEQLCQQWQYLQAAYPGIFTGEDILAEYTDMRYQTAIDFDSGTILEGSLHNMRVVREGTTFFGTVEMESENPDNDLIFLLALKNLCHAGAKRNRGLGRIRCSIIGQEQGHMQNLWKKIRERGTIV

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Crispr_ID: NZ_CP027569_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_4

1603220-1605087

TypeIII

Consensus_repeat	Method
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	PILER-CR
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CRISPRCasFinder
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CRT

25 spacers

cas14j,cas6,csx1,cas10,csm3gr7,csx10gr5

The CRISPR arrays of NZ_CP027569_4

>merge|NZ_CP027569|4|1603220-1605087|PILER-CR,CRISPRCasFinder,CRT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTTTTATTTACTTCCCAGTTATCGGGAATAAATCCAGATAGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTATAAGCATCCAAGAGATCACTATTTGACCCCGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACCCATTAGATTTAACTCTAGACCTACTCCAGAACAAGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACAGGTTTTGACTCCCTTCTTCTTTGCAAGTTTCATGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTTCCTTGAAAAACAGGTTAATCGTCAGTGGCTGTGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTTAACGTCAGGGTGCTGCCATCGCTCTGAACAATGTTCAGGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACGCGATCTAAGTATTCGCGATCGTCAATTAAATACTTCTCGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACATCCTGTTCAAATAATTCTTGTTCTGTCATGTTAATCGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTTTCATAATAAATATCTCCTTTTCTTGTCGTTCAAAAAGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACCAAACCTGTAAGATCTCTGCTTTTCATATATTCGATATATGAAAAGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACAAGCAACCAACCTGGAAACGATATAGAAAGTTGCCGGAGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACATATTCATAATTTTCAGAGAATATGCTACGCCTTTGTCACGATCGCAAACATCCATTGCGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACCTGTGAAGATTGCCACAGCAATGATAGCCATGGCAAAATAAAGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTTATTCACAATTATAGTATACAATCAAAAAAAAATACCTGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTTTTATACAACAAAGCAACAATTTTAATGAAGTAATTGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTCTTTGCTAACAAATTTAGATTCATAGTCTTTGTTAGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACACCTGTGATTTTAAACATACTGATCTCCTTATCTCCGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACATAATATGGTGCCAACATATGAAGAAGCTAATAAGTAGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACGTTATGGATTTTTTGTTATCATCATTATTCACAAACGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTAAACCTTTAACTTAGTTTTGATTTTAATCGGTTTGTTTTTATGTGTTAATGGTCTTACCCCATTAGGGGACGGAAACTTAAAGTGAATATTAAAATTAAGGTAGGAGATATAAAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACAATTCATTTAGCGCTTGTAAAAGATACCCATTTATTAATGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACCTTCTAATTCACGGATTTGTCTTCTGACTAACAAAGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACCTGTTCGAACAATTCGTCAATTTTTTTCATGATAATGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACACGACAAATATACATTCTTCTCTCTATTCACTGATGTGTTAATGGCCTTACCCCATTAGTAGGGGACGGA

>NZ_CP027569|4|2|1603220-1605017|PILER-CR
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTTATTTACTTCCCAGTTATCGGGAATAAATCCAGATA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TATAAGCATCCAAGAGATCACTATTTGACCCC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CCATTAGATTTAACTCTAGACCTACTCCAGAACAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	AGGTTTTGACTCCCTTCTTCTTTGCAAGTTTCAT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTCCTTGAAAAACAGGTTAATCGTCAGTGGCTGT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTAACGTCAGGGTGCTGCCATCGCTCTGAACAATGTTCAG
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	GCGATCTAAGTATTCGCGATCGTCAATTAAATACTTCTC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATCCTGTTCAAATAATTCTTGTTCTGTCATGTTAATC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTCATAATAAATATCTCCTTTTCTTGTCGTTCAAAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CAAACCTGTAAGATCTCTGCTTTTCATATATTCGATATATGAAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	AAGCAACCAACCTGGAAACGATATAGAAAGTTGCCGGA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATATTCATAATTTTCAGAGAATATGCTACGCCTTTGTCACGATCGCAAACATCCATTGC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CTGTGAAGATTGCCACAGCAATGATAGCCATGGCAAAATAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTATTCACAATTATAGTATACAATCAAAAAAAAATACCT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTTATACAACAAAGCAACAATTTTAATGAAGTAATT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TCTTTGCTAACAAATTTAGATTCATAGTCTTTGTTA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ACCTGTGATTTTAAACATACTGATCTCCTTATCTCC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATAATATGGTGCCAACATATGAAGAAGCTAATAAGTA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	GTTATGGATTTTTTGTTATCATCATTATTCACAAAC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TAAACCTTTAACTTAGTTTTGATTTTAATCGGTTTGTTTTTAT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTAAAGTGAATATTAAAATTAAGGTAGGAGATATAAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AATTCATTTAGCGCTTGTAAAAGATACCCATTTATTAAT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CTTCTAATTCACGGATTTGTCTTCTGACTAACAAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CTGTTCGAACAATTCGTCAATTTTTTTCATGATAAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC

>NZ_CP027569|4|4|1603220-1605087|CRISPRCasFinder
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTTATTTACTTCCCAGTTATCGGGAATAAATCCAGATA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TATAAGCATCCAAGAGATCACTATTTGACCCC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CCATTAGATTTAACTCTAGACCTACTCCAGAACAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	AGGTTTTGACTCCCTTCTTCTTTGCAAGTTTCAT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTCCTTGAAAAACAGGTTAATCGTCAGTGGCTGT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTAACGTCAGGGTGCTGCCATCGCTCTGAACAATGTTCAG
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	GCGATCTAAGTATTCGCGATCGTCAATTAAATACTTCTC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATCCTGTTCAAATAATTCTTGTTCTGTCATGTTAATC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTCATAATAAATATCTCCTTTTCTTGTCGTTCAAAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CAAACCTGTAAGATCTCTGCTTTTCATATATTCGATATATGAAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	AAGCAACCAACCTGGAAACGATATAGAAAGTTGCCGGA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATATTCATAATTTTCAGAGAATATGCTACGCCTTTGTCACGATCGCAAACATCCATTGC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CTGTGAAGATTGCCACAGCAATGATAGCCATGGCAAAATAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTATTCACAATTATAGTATACAATCAAAAAAAAATACCT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTTATACAACAAAGCAACAATTTTAATGAAGTAATT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TCTTTGCTAACAAATTTAGATTCATAGTCTTTGTTA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ACCTGTGATTTTAAACATACTGATCTCCTTATCTCC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATAATATGGTGCCAACATATGAAGAAGCTAATAAGTA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	GTTATGGATTTTTTGTTATCATCATTATTCACAAAC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TAAACCTTTAACTTAGTTTTGATTTTAATCGGTTTGTTTTTAT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTAAAGTGAATATTAAAATTAAGGTAGGAGATATAAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AATTCATTTAGCGCTTGTAAAAGATACCCATTTATTAAT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CTTCTAATTCACGGATTTGTCTTCTGACTAACAAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CTGTTCGAACAATTCGTCAATTTTTTTCATGATAAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ACGACAAATATACATTCTTCTCTCTATTCACTGAT
GTGTTAATGGCCTTACCCCATTAGTAGGGGACGGA

>NZ_CP027569|4|2|1603220-1605087|CRT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTTATTTACTTCCCAGTTATCGGGAATAAATCCAGATA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TATAAGCATCCAAGAGATCACTATTTGACCCC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CCATTAGATTTAACTCTAGACCTACTCCAGAACAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	AGGTTTTGACTCCCTTCTTCTTTGCAAGTTTCAT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTCCTTGAAAAACAGGTTAATCGTCAGTGGCTGT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTAACGTCAGGGTGCTGCCATCGCTCTGAACAATGTTCAG
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	GCGATCTAAGTATTCGCGATCGTCAATTAAATACTTCTC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATCCTGTTCAAATAATTCTTGTTCTGTCATGTTAATC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTCATAATAAATATCTCCTTTTCTTGTCGTTCAAAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CAAACCTGTAAGATCTCTGCTTTTCATATATTCGATATATGAAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	AAGCAACCAACCTGGAAACGATATAGAAAGTTGCCGGA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATATTCATAATTTTCAGAGAATATGCTACGCCTTTGTCACGATCGCAAACATCCATTGC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	CTGTGAAGATTGCCACAGCAATGATAGCCATGGCAAAATAAA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTATTCACAATTATAGTATACAATCAAAAAAAAATACCT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTTTATACAACAAAGCAACAATTTTAATGAAGTAATT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TCTTTGCTAACAAATTTAGATTCATAGTCTTTGTTA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ACCTGTGATTTTAAACATACTGATCTCCTTATCTCC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	ATAATATGGTGCCAACATATGAAGAAGCTAATAAGTA
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	GTTATGGATTTTTTGTTATCATCATTATTCACAAAC
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TAAACCTTTAACTTAGTTTTGATTTTAATCGGTTTGTTTTTAT
GTGTTAATGGTCTTACCCCATTAGGGGACGGAAAC	TTAAAGTGAATATTAAAATTAAGGTAGGAGATATAAA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	AATTCATTTAGCGCTTGTAAAAGATACCCATTTATTAAT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CTTCTAATTCACGGATTTGTCTTCTGACTAACAAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CTGTTCGAACAATTCGTCAATTTTTTTCATGATAAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	ACGACAAATATACATTCTTCTCTCTATTCACTGAT
GTGTTAATGGCCTTACCCCATTAGTAGGGGACGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_036203056.1\|1606189_1607305_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP027569.1\|WP_027895898.1\|1608750_1609539_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|227838
NZ_CP027569.1\|WP_106669711.1\|1605570_1605849_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_014016003.1\|1594334_1595069_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|234640
NZ_CP027569.1\|WP_051525016.1\|1613643_1614324_+\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NZ_CP027569.1\|WP_027894878.1\|1599452_1599731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_051525017.1\|1607945_1608773_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP027569.1\|WP_027894879.1\|1597261_1598602_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_022497505.1\|1595354_1595597_+\|DUF1858-domain-containing-protein	unknown	unknown	gnl\|CDD\|274898
NZ_CP027569.1\|WP_027895894.1\|1614320_1615907_+\|hypothetical-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	gnl\|CDD\|131722
NZ_CP027569.1\|WP_027895896.1\|1610288_1611965_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027894880.1\|1596225_1596786_+\|hemerythrin	unknown	unknown	gnl\|CDD\|226454
NZ_CP027569.1\|WP_014016002.1\|1593747_1594320_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|378317
NZ_CP027569.1\|WP_027895897.1\|1609625_1610261_+\|hypothetical-protein	csx1	cls001403_csx1_CAS-III	unknown
NZ_CP027569.1\|WP_051524950.1\|1598666_1599191_+\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|276807
NZ_CP027569.1\|WP_155266584.1\|1611970_1613647_+\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|274208
NZ_CP027569.1\|WP_027894881.1\|1595612_1596206_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|172761
NZ_CP027569.1\|WP_106669710.1\|1602717_1602996_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_051525018.1\|1607504_1607798_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_022497506.1\|1593013_1593751_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_036203056.1\|1606189_1607305_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.41848e-57
NZ_CP027569.1\|WP_027894881.1\|1595612_1596206_+\|hypothetical-protein	gnl\|CDD\|172761	PRK14273, PRK14273, phosphate ABC transporter ATP-binding protein; Provisional.	0.00263206
NZ_CP027569.1\|WP_014016003.1\|1594334_1595069_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|234640	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator.	8.54828e-145
NZ_CP027569.1\|WP_051525016.1\|1613643_1614324_+\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	9.25431e-17
NZ_CP027569.1\|WP_155266584.1\|1611970_1613647_+\|hypothetical-protein	gnl\|CDD\|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	5.88787e-06
NZ_CP027569.1\|WP_027895894.1\|1614320_1615907_+\|hypothetical-protein	gnl\|CDD\|131722	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family. CRISPR is a widespread repeat family in prokaryotes. At least 45 different protein families occur in prokaryotes only when these repeats are present. This family, a minor CRISPR-associated protein family, seems largely restricted to the Cyanobacteria. It belongs to the RAMP superfamily (pfam03787).	4.62501e-16
NZ_CP027569.1\|WP_022497505.1\|1595354_1595597_+\|DUF1858-domain-containing-protein	gnl\|CDD\|274898	TIGR03980, conserved_hypothetical_protein, hybrid cluster protein-associated redox disulfide domain. Members of this protein family resemble the domain of unknown function DUF1858 described by pfam08984, but all members contain an apparent redox-active disulfide. In at least one member protein, a cysteine in the CXXC motif is substituted by a selenocysteine. Most member proteins consist of this domain only, but a few members are fused to or adjacent to members of the hybrid-cluster (prismane) family or the nitrite/sulfite reductase family. [Energy metabolism, Electron transport].	2.45056e-22
NZ_CP027569.1\|WP_027894880.1\|1596225_1596786_+\|hemerythrin	gnl\|CDD\|226454	COG3945, COG3945, Uncharacterized conserved protein [Function unknown].	4.33289e-29
NZ_CP027569.1\|WP_014016002.1\|1593747_1594320_+\|RNA-methyltransferase	gnl\|CDD\|378317	pfam09936, Methyltrn_RNA_4, SAM-dependent RNA methyltransferase. This family has a Rossmanoid fold, with a deep trefoil knot in its C-terminal region. It has structural similarity to RNA methyltransferases, and is likely to function as an S-adenosyl-L-methionine (SAM)-dependent RNA 2'-O methyltransferase.	5.28217e-108
NZ_CP027569.1\|WP_051524950.1\|1598666_1599191_+\|sel1-repeat-family-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	3.09261e-26
NZ_CP027569.1\|WP_027895898.1\|1608750_1609539_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	4.13374e-14
NZ_CP027569.1\|WP_051525017.1\|1607945_1608773_+\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	0.000373347
NZ_CP027569.1\|WP_022497506.1\|1593013_1593751_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	7.84376e-144

>NZ_CP027569.1|WP_106669710.1|1602717_1602996_+|hypothetical-protein
MKKLKVKNNVFLIARESWKGSRKLDYYLILKNGKKYYAFSREYSRRCHTLCQGATPINTILKIREHNKAVMNLKKYLERMMPFLIEYYGISA
>NZ_CP027569.1|WP_027894878.1|1599452_1599731_+|hypothetical-protein
MKKLNVKNNVFLIARESWKGSRKLDYYLILKNGKKYYAFSREYSRRCHTLCQGATPINTILKIREHNKAVMNLKKYLERMMPFLIEYYGISA
>NZ_CP027569.1|WP_051524950.1|1598666_1599191_+|sel1-repeat-family-protein
MDRSEQTKKNQAINLYTWGLELLSDGGHVRDADKVGWMLIENAATQGDRDAQNYLGDAYFYSYKKDEKAAFWYTKAAEQGLPEAQAMLGMLYLLGRGVTRNYAKARHYFEQALQGGELNVEAAVAQYWLGQMYKEGIGVPKDREKGKKLIHLAAINGYAPHGTPQEIRKQMGEK
>NZ_CP027569.1|WP_027894879.1|1597261_1598602_+|hypothetical-protein
MKQIDIVQAQQDIQFIYNCYKHFGLDVDECRAVLKERDCCEHRDSDGHLLFDEASSLTMIDSAKNCHDTYICKKCQTVFSLKIDPDTHEYSYNEVLRYNSLDDLLKLDFIAHIEKSYHILDRMQQFTPKDVTFFHNNLKIQAELLQRETRRQTAILEKLDHITLDLPYYDDFSAKHIRSILFPLYKQMTFRTFWVMSFSVPIFDTLDYYDCTVNLLDDIPELNMDEALMLIEDCFKKAGTTLLESRRRYAWEPVCNHRDEQGNLLIHNLPNMVQTVECERCHAVFALNFNEQLGKYIHGYLLDDRHFYDFERAGVAEKAEAVLEKDRLSNVHSLTDYYHMREELNEQYQAVMEDKMACWELVGRLNTCLLEIDGLNTFTRHQVEDSVLYAQKEMIDRYLWQHEIQKQLKARLKEFCTLPSLKYPWYNKKNTKTEDTEKGKLLHGTF
>NZ_CP027569.1|WP_027894880.1|1596225_1596786_+|hemerythrin
MYCTEVMVKQHANISRMLKIIKEICCGILEGAEIDQKEFAEILDFIRRYADGHHHRREELVLFPEMVDHLEEVASIIIKHGMLVEHDLVRAHVRALDEALKLYAQEPKTEYKLQVLTEAMAYANRLQQHVEKENNVVYPLADRGLSDDIKNKIDTTVHEMEAEEGPDFAKGYMDLLDRLEKKYKIA
>NZ_CP027569.1|WP_027894881.1|1595612_1596206_+|hypothetical-protein
MSAFLGPIHFWLYNKIQFQESLIDELIRYASSQGWSDGDLADKYGSKDRRKLDEVIDESNIHGWLQSRIHDAEGRYAALVLDVAGNQEDRLTALKKAAYDFGASQHLSAATAPEAFHRLDDLLLDGMPCDQVNRVRESDDNRIAWDRTMDLHSEFWQGHGDCYYALRQALVDGLLAATDYAFTSPAEGQYEIVKKSA
>NZ_CP027569.1|WP_022497505.1|1595354_1595597_+|DUF1858-domain-containing-protein
MLKSVLNKFAANEKVTSDMIMGDIIRLHPEVVDTLIGQGMHCLGCPSSQQESLANACFVHGLDPEIVTKAVNVAIEANKQ
>NZ_CP027569.1|WP_014016003.1|1594334_1595069_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MSGHSKWANIKRKKGKNDAIRGKITTKIGREITIAVRMGGPDPVGNMRLKLALQKAKENNIPKDNIKRAIQKGAGATEGQNYEEIVYEGYGPAGVAVTVNVLTDNRNRAAAAVRHEFSKSGGNLGATGCVSWMFHNTGIFVVNRDQADEDQIMEVALDAGADDVKVSDEDYEIITTPEAFDAVEKALADNNIETEHASITMVPENTIKLTGEDAEKMERFVDALDELDDVQDVYHNAELPEEEE
>NZ_CP027569.1|WP_014016002.1|1593747_1594320_+|RNA-methyltransferase
MTSPLYVGLVHYPIYDKNFNVIATAITNYDLHDISRSAKTYGVKKYFIIHHIPGQLDMVHKIMDFWESPVGRNYNGYRTQAFDIVDIRPSIEAAVEAVTTAEGKKPYVVTTDARTYANTISYKDLRHKREEDDTPILLLFGTGYGMTKETMEKFDFILEPIYGAGEYNHLSVRSAAAIILDRLAGEDWWK
>NZ_CP027569.1|WP_022497506.1|1593013_1593751_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRIDIISLFPEFIEAFFQHSIIGRARAAGLLDLDVTNPRNFTYDRHHMVDDTIYGGGCGMLMKTAPLYAAVEAVRRQVPRRRIIFMGPAGQTFTQAKARELATYDQLILLCGHYEGVDYRVEQDLADETISVGDYVLTGGELPAMTVTDAVARMIPGVLGAAAGAADDSFYSSLLEYPQYTKPAVFRGMAVPEVLRNGDHAKIDAWRREASLARTLELRPDLLQHCDLSPADQKILAKLKGAKKG
>NZ_CP027569.1|WP_106669711.1|1605570_1605849_+|hypothetical-protein
MKKLKVKNNVFLIARESWKGSRKLDYYLILKNGKKYYAFSREYSRRCHTLCQGATPINTILKIREHNKAVMNLRKYLERMMPFLIEYYGISA
>NZ_CP027569.1|WP_036203056.1|1606189_1607305_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MIVNKAYRYRIYPTTAQKMMFAKTFGCVRFIYNKMLSDRIDYYKETGQKLNNTPAQYKEDFPWLKEVDSLALANAQLNLNKAYSHFWNDSQHFGKPRFKSKKNSRASYSTNNQKGSVRIEGHKVKLPKVGWVKLCQHRPLPENSIIKTVTISKTPSGKYYISMLVEYENQVLPVIPKTFLGLDFAMHGLYVASDEEDAKYPDFLRKAEKRLAKAQQKLSKKQKGSHNREKQRLRVAILHEKVANQRRDFLHKKSRYLADRYDAIGIEDISVKAMAKRKKGGKFSFGKSVADNGWNLFTNMLEYKLAWQGKQLIKIDKWYPSSQLCHVCGYRTSETKDLSVREWNCPKCGSHHDRDKNAAINIREEARRISA
>NZ_CP027569.1|WP_051525018.1|1607504_1607798_+|hypothetical-protein
MKDDTNPSQAMVIPPSGEVARCEQKDVFMGIISGIPIYKSDLGDVKNLPDSQDDTIYLVSTPVAEKMKAVRDDLYVPAGFVRNERGQIQGCTFLAKH
>NZ_CP027569.1|WP_051525017.1|1607945_1608773_+|hypothetical-protein
MDKKNKDMSILGKEAYESKVALEALNRAGKCPQLKGHVHEILYKDSYNTNLKHLLEGKHAALTKSNTAQMKDIVVMKGSKVVGHAQLKDTISPGGVAKTIKQINSGHYNKTRVLGTEETVQKIGAKVNQKVSSSGISSNTTKRIADKALGKMPTVGAVGNALKSGGTSGAILGAGIETVTSIYDVATGEKDLDDAVIDVAAAGVRGGVVGAASSAAGSVAAGAAGTAVSAVAGTAAGTAIAGTAVGAAAVAAAPVVIGFAAACAVGSFISSLFDD
>NZ_CP027569.1|WP_027895898.1|1608750_1609539_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MNTLQTIKLKLAVPQGMRLNQSLGSVLQGVIMETIDTQYAAYLHQQNLRPYSQHCVFHAKSQTLDWYISALNTDASHKLLLPLLNMPDTVYLRQKQKAITIQQRTLIRDTTYEKLAENFFSKESLITNSPSTITFHFQTSTAFRRKGQYVVYPEIPLLITNLLKRWNTFSEMDFLNSSDIVPLLLEHPFEVIQYNLSMKYFSLEGTKIPAFQGNFSFKTDKNQTVRQILSLLATFAPYAGVGIKTAIGMGAVTTEINRQTNY
>NZ_CP027569.1|WP_027895897.1|1609625_1610261_+|hypothetical-protein
MRKVFLSNIFIQNLEKTVFKSDDFIISDETKYLCSLPYVIEDRVKEGDTVCIITGVNQSTDKQENKGKKNYEEIFKPEIRRSVEGKNVTLEFYEIPIMKHYDADAFNSFFRQVVELLQEGDILHLDLTWGLKPYTTSLFIASMYAENAGIDVKVDTVFYAHRYDGVDDGNHDKPSFIYDITSLYYLNSLAGHAKKGQRPMLDHILRFLIKE
>NZ_CP027569.1|WP_027895896.1|1610288_1611965_+|hypothetical-protein
MMDVKNTKSAEEQQKQLEDEIELLAKNIAEKRERLKVLMDSSDVWDAKLAQSIFSYNKLFAYFLTKLDEYAGKEGTDSFFKCFQADYLPRIKSLPAWDEEKGAENEKGDKKKISSVEIERTIQLLEGHLSVLQHLLNEVYNQRHSAQQKLVEKMAFEAAFRRYGFQVNGERALFSQLFVLYFNQSANEEFNKKLDKFREDKKAIYTVRLKINKDLISDIRNKLDYLSGKIIENQEMKQLTEEMQKEKSFLAADVFRKRFPKLYKLYAMYECDESNHIKNKALPRFDFKFNGYDGIMFYKILNDSCLKYNSQMVEYNDFLHMFNTYYKQRTQGISDVDRDNYEQMCDAISFYLDQVKRENKCKVSVPTIKNWKDETQHRVREWLKKDVHLLDKDIEECMEELKEISECSFAFFYNDKNDEKTNDAWDGKQAELQEEKERASAVILQAFYDVVEDEDIRERQRPLLKLYVGLRIEALGEFSQEQVLEFLSEDEIIAYKQYEQTNLAVYKKYEQQDKYENKLIAGFLVEYTGRKPDTIRKDIKKFDKVMWKRVKNNFISKG
>NZ_CP027569.1|WP_155266584.1|1611970_1613647_+|hypothetical-protein
MKVGAILLDTRSIQKYIFSCNKLQTNIGASYLVDAIFTKEMVDVLKDAGCTLPDITWQEYTAQKEKNKKLPDLMMVDHLDIDCEIAYIGGGNMLILLRDGGLNDDALRDKCRNLVSQWSRRVLLKAPGLKTGAAIDVVDILPGNFKQAIDSLYQQLKEHQNTILPCVDLPYTGLTLECDISGKVADVNSYKEDGSKRWISSEIIAKRNAYQDSRRQLEKDFLEENDGETPFAFPDELDQLGYKDKESYICVIHIDGNNMGVKFSHCRDMQERRALSLTVAQVVKDGFKALLDKEVKPLALAQDEKKYLSLKTTKYGKVLLPIRPIIIGGDDVTFICPGRVGLRYAQAFIKAVQSKKLLSKDLYTKINKELKAEGKEISKKMSCCGGIAIVPAKYPFYRAYELAEQLCGSAKKKSRQHDTNVVDFAVLHGQMAPELSQLESQTYEAPQGYLHYGPYAVDSTGENGTNLADLFALCQSMLDFSVPENKIKKLREVLQQDLHSQQLFLENSPKMRAILQQETGKEEVTAEDFWQDVDGQKKTRYMDAIEIMKFWIPEGGNK
>NZ_CP027569.1|WP_051525016.1|1613643_1614324_+|hypothetical-protein
MMKSFTIQIETLSPLHLGSGQENIVLDADVVYDQYGMPYFPARRFRGLLYESAMEMEEMSQADPIMSHSRLVALFGHQDETASQLRISNFYLGKPDQPGNTYEQLCQQWQYLQAAYPGIFTGEDILAEYTDMRYQTAIDFDSGTILEGSLHNMRVVREGTTFFGTVEMESENPDNDLIFLLALKNLCHAGAKRNRGLGRIRCSIIGQEQGHMQNLWKKIRERGTIV
>NZ_CP027569.1|WP_027895894.1|1614320_1615907_+|hypothetical-protein
MKQITYWVHNLSPLNFAEKNNDATLYTTRDYITGSAVRGMMAEAFIRQYKLGKEAHKNQSFYDLFLSGKVRFLPAYPLSGVSDKSKVVFQLPLSMMRSKDGKIIKDISGVGAPEAGFKKMKGFVVQDGQTLYPVSVKKKITLHMARNTSDEARRRGKSEDGGIFNYEAMEPGQWFQGTILCDDDCDAEPLLASCFSFSQDNLIHLGHSRQTEYGACQLQLVSDQTSYRDLDASQPVYLYALTPYIPWSEWQRVTDIAEALVTQLEQRLSEKTGHTVSLHPASGTLNTAKIFAANEDVTGYLAVWNGRRERKNALSAASLIPIDAEKLSAEDLHVLQDLLYQGIGCRREEGFGQFRLWQPLTDVSLADHESQPITGGVIPHSVVYHTARKIIRKRLLAEVQNRAAQDAGKLKSGNVGKHILNRVEILMESHQTQQEIQDVIEHEFKKIAKDNLVKFSVGDMSLCDKLLQPQLSFDWIASLYLQEGQKERLEHDLGQDVFSLDQNVVYKWYWLWFVRHVKKAMAMKGAGA

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Crispr_ID: NZ_CP027569_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_5

1625569-1626972

TypeIII

Consensus_repeat	Method
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	PILER-CR
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CRISPRCasFinder
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CRT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	PILER-CR

19 spacers

cas2,csm3gr7,csx19,cas1

The CRISPR arrays of NZ_CP027569_5

>merge|NZ_CP027569|5|1625569-1626972|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACGATTCCCACTTCTGCCCAAGTAGGAATCCACCACAAAAGAGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACAATGCTACACCAATTGCGTTACACATCTGAGTAGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACATGAAGCGTATAAAACTGCAGATCTTAAACTTGGTGCAAGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACTGGGTCATTAAAGTAAACCATCGTGGCTAATTGTGGCCCGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACAAGTCAAATTGTTGTTTTTATCTATACCAAATACGTTTGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACAAAATGTTGTCAAGGCGTTTGGGTTCTAATCCAAATGCCGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACGACCAGAGAATTCGTCATCAGGGACTAAATTATATGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACAAGCTTCCGCTTCCGACAGCATGTATCCAAATGCACGTTTGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACCAGCCCTGAAAGTCAATGTTTTCAAGCTCCTCGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACGGGTGGATAATCCATACGGAAGATGAAGATACAAGGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACAAAATGGAAAGGAGGTGAGATATTACCTTCATCTCTGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACCCCAATAAGTTAAGAGTTAAGAAATGATTATATATTATGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACTTGAACAGCCATTGCCTATTTACTTCCTTTTCCAGGAAGTGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACGCCGAAGAATTTGATTACGGGTCTAAATGAACGGTTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACCAGTAAAGTCGGAAAGCTCTATCTTTAGTTCTAAAGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACCAGTAAAGTCGGAAAGCTCTATCTTTAGTTCTAAAGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACAAGGAGGTTTTGAAAACGTTGTTAAAGCTCTAGGTTTCGTGTTAATGGCATTACCCCAACAGGGGACGGAAACTGCCGGATTCTTGATTTTCACATCATGTTCATGTGTTAATGGCATTACCCCAACAGGGGACGGAAACGCTGAGAATCCACATGTTGTGGATCCGTTTTGTCATAAGTTTTGTGTTAATGGCCTTACCCCATTAGGGGACGGAAAAG

>NZ_CP027569|5|3|1625569-1626041|PILER-CR
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GATTCCCACTTCTGCCCAAGTAGGAATCCACCACAAAAGA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AATGCTACACCAATTGCGTTACACATCTGAGTA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	ATGAAGCGTATAAAACTGCAGATCTTAAACTTGGTGCAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	TGGGTCATTAAAGTAAACCATCGTGGCTAATTGTGGCCC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAGTCAAATTGTTGTTTTTATCTATACCAAATACGTTT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAAATGTTGTCAAGGCGTTTGGGTTCTAATCCAAATGCC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACGACCAGAGAATTCGTCATCAGGGACTAAATTATATGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACAAGCTTCCGCTTCCGACAGCATGTATCCAAATGCACGTTTGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CAGCCCTGAAAGTCAATGTTTTCAAGCTCCTC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GGGTGGATAATCCATACGGAAGATGAAGATACAAG
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAAATGGAAAGGAGGTGAGATATTACCTTCATCTCT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CCCAATAAGTTAAGAGTTAAGAAATGATTATATATTAT


>NZ_CP027569|5|5|1625569-1626972|CRISPRCasFinder
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GATTCCCACTTCTGCCCAAGTAGGAATCCACCACAAAAGA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AATGCTACACCAATTGCGTTACACATCTGAGTA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	ATGAAGCGTATAAAACTGCAGATCTTAAACTTGGTGCAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	TGGGTCATTAAAGTAAACCATCGTGGCTAATTGTGGCCC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAGTCAAATTGTTGTTTTTATCTATACCAAATACGTTT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAAATGTTGTCAAGGCGTTTGGGTTCTAATCCAAATGCC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GACCAGAGAATTCGTCATCAGGGACTAAATTATAT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAGCTTCCGCTTCCGACAGCATGTATCCAAATGCACGTTT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CAGCCCTGAAAGTCAATGTTTTCAAGCTCCTC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GGGTGGATAATCCATACGGAAGATGAAGATACAAG
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAAATGGAAAGGAGGTGAGATATTACCTTCATCTCT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CCCAATAAGTTAAGAGTTAAGAAATGATTATATATTAT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	TTGAACAGCCATTGCCTATTTACTTCCTTTTCCAGGAAGT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GCCGAAGAATTTGATTACGGGTCTAAATGAACGGTT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CAGTAAAGTCGGAAAGCTCTATCTTTAGTTCTAAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CAGTAAAGTCGGAAAGCTCTATCTTTAGTTCTAAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAGGAGGTTTTGAAAACGTTGTTAAAGCTCTAGGTTTC
GTGTTAATGGCATTACCCCAACAGGGGACGGAAAC	TGCCGGATTCTTGATTTTCACATCATGTTCAT
GTGTTAATGGCATTACCCCAACAGGGGACGGAAAC	GCTGAGAATCCACATGTTGTGGATCCGTTTTGTCATAAGTTTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAAG

>NZ_CP027569|5|3|1625569-1626971|CRT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GATTCCCACTTCTGCCCAAGTAGGAATCCACCACAAAAGA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AATGCTACACCAATTGCGTTACACATCTGAGTA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	ATGAAGCGTATAAAACTGCAGATCTTAAACTTGGTGCAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	TGGGTCATTAAAGTAAACCATCGTGGCTAATTGTGGCCC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAGTCAAATTGTTGTTTTTATCTATACCAAATACGTTT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAAATGTTGTCAAGGCGTTTGGGTTCTAATCCAAATGCC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GACCAGAGAATTCGTCATCAGGGACTAAATTATAT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAGCTTCCGCTTCCGACAGCATGTATCCAAATGCACGTTT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CAGCCCTGAAAGTCAATGTTTTCAAGCTCCTC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GGGTGGATAATCCATACGGAAGATGAAGATACAAG
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAAATGGAAAGGAGGTGAGATATTACCTTCATCTCT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CCCAATAAGTTAAGAGTTAAGAAATGATTATATATTAT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	TTGAACAGCCATTGCCTATTTACTTCCTTTTCCAGGAAGT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GCCGAAGAATTTGATTACGGGTCTAAATGAACGGTT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CAGTAAAGTCGGAAAGCTCTATCTTTAGTTCTAAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CAGTAAAGTCGGAAAGCTCTATCTTTAGTTCTAAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAGGAGGTTTTGAAAACGTTGTTAAAGCTCTAGGTTTC
GTGTTAATGGCATTACCCCAACAGGGGACGGAAAC	TGCCGGATTCTTGATTTTCACATCATGTTCAT
GTGTTAATGGCATTACCCCAACAGGGGACGGAAAC	GCTGAGAATCCACATGTTGTGGATCCGTTTTGTCATAAGTTTT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAA

>NZ_CP027569|5|4|1626152-1626467|PILER-CR
	GATTCCCACTTCTGCCCAAGTAGGAATCCACCACAAAAGA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AATGCTACACCAATTGCGTTACACATCTGAGTA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	ATGAAGCGTATAAAACTGCAGATCTTAAACTTGGTGCAA
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	TGGGTCATTAAAGTAAACCATCGTGGCTAATTGTGGCCC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAGTCAAATTGTTGTTTTTATCTATACCAAATACGTTT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAAATGTTGTCAAGGCGTTTGGGTTCTAATCCAAATGCC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACGACCAGAGAATTCGTCATCAGGGACTAAATTATATGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAACAAGCTTCCGCTTCCGACAGCATGTATCCAAATGCACGTTTGTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CAGCCCTGAAAGTCAATGTTTTCAAGCTCCTC
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	GGGTGGATAATCCATACGGAAGATGAAGATACAAG
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	AAAATGGAAAGGAGGTGAGATATTACCTTCATCTCT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC	CCCAATAAGTTAAGAGTTAAGAAATGATTATATATTAT
GTGTTAATGGCCTTGCCCCATTAGGGGACGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_027895893.1\|1615903_1617376_+\|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	gnl\|CDD\|377130
NZ_CP027569.1\|WP_027895887.1\|1621908_1622673_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP027569.1\|WP_051525014.1\|1622804_1623299_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|379137
NZ_CP027569.1\|WP_027895891.1\|1617844_1619722_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NZ_CP027569.1\|WP_027895880.1\|1634542_1635637_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_106669710.1\|1627451_1627730_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895879.1\|1635995_1636178_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895884.1\|1625105_1625300_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895877.1\|1637304_1638915_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206739
NZ_CP027569.1\|WP_027895888.1\|1621309_1621903_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|238835
NZ_CP027569.1\|WP_051525015.1\|1619801_1620083_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP027569.1\|WP_027895881.1\|1633389_1634526_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293853
NZ_CP027569.1\|WP_027895876.1\|1638964_1640737_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206646
NZ_CP027569.1\|WP_155266583.1\|1617381_1617861_+\|hypothetical-protein	csx19	cls001376_csx19_CAS-III-D	gnl\|CDD\|274900
NZ_CP027569.1\|WP_027895882.1\|1630521_1633350_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212667
NZ_CP027569.1\|WP_027895883.1\|1630279_1630474_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895889.1\|1620222_1621302_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP027569.1\|WP_027895878.1\|1636274_1637270_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP027569.1\|WP_054335782.1\|1640946_1641402_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP027569.1\|WP_036220931.1\|1623315_1624959_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|379284

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_027895893.1\|1615903_1617376_+\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	4.25703e-13
NZ_CP027569.1\|WP_027895887.1\|1621908_1622673_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	5.29519e-19
NZ_CP027569.1\|WP_051525014.1\|1622804_1623299_+\|radical-SAM-protein	gnl\|CDD\|379137	pfam13353, Fer4_12, 4Fe-4S single cluster domain. This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	1.35202e-30
NZ_CP027569.1\|WP_027895891.1\|1617844_1619722_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	4.71407e-67
NZ_CP027569.1\|WP_027895878.1\|1636274_1637270_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.60503e-109
NZ_CP027569.1\|WP_027895882.1\|1630521_1633350_+\|Hsp70-family-protein	gnl\|CDD\|212667	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family. HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs.	9.18855e-66
NZ_CP027569.1\|WP_027895877.1\|1637304_1638915_+\|hypothetical-protein	gnl\|CDD\|206739	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins. The dynamin family of large mechanochemical GTPases includes the classical dynamins and dynamin-like proteins (DLPs) that are found throughout the Eukarya. This family also includes bacterial DLPs. These proteins catalyze membrane fission during clathrin-mediated endocytosis. Dynamin consists of five domains; an N-terminal G domain that binds and hydrolyzes GTP, a middle domain (MD) involved in self-assembly and oligomerization, a pleckstrin homology (PH) domain responsible for interactions with the plasma membrane, GED, which is also involved in self-assembly, and a proline arginine rich domain (PRD) that interacts with SH3 domains on accessory proteins. To date, three vertebrate dynamin genes have been identified; dynamin 1, which is brain specific, mediates uptake of synaptic vesicles in presynaptic terminals; dynamin-2 is expressed ubiquitously and similarly participates in membrane fission; mutations in the MD, PH and GED domains of dynamin 2 have been linked to human diseases such as Charcot-Marie-Tooth peripheral neuropathy and rare forms of centronuclear myopathy. Dynamin 3 participates in megakaryocyte progenitor amplification, and is also involved in cytoplasmic enlargement and the formation of the demarcation membrane system. This family also includes mitofusins (MFN1 and MFN2 in mammals) that are involved in mitochondrial fusion. Dynamin oligomerizes into helical structures around the neck of budding vesicles in a GTP hydrolysis-dependent manner.	8.82896e-15
NZ_CP027569.1\|WP_027895888.1\|1621309_1621903_+\|AAA-family-ATPase	gnl\|CDD\|238835	cd01672, TMPK, Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step in either de novo or salvage biosynthesis of thymidine triphosphate (TTP).	3.08866e-09
NZ_CP027569.1\|WP_051525015.1\|1619801_1620083_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.80967e-18
NZ_CP027569.1\|WP_027895881.1\|1633389_1634526_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293853	cd16295, TTHA0252-CPSF-like_MBL-fold, Thermus thermophilus TTHA0252 and related cleavage and polyadenylation specificity factors; MBL-fold metallo-hydrolase domain. Includes the archaeal cleavage and polyadenylation specificity factors (CPSFs) such as Methanothermobacter thermautotrophicus MTH1203, and Pyrococcus horikoshii PH1404. In addition to the MBL-fold metallo-hydrolase nuclease and the beta-CASP domains, members of this subgroup contain two contiguous KH domains. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	2.26402e-43
NZ_CP027569.1\|WP_027895876.1\|1638964_1640737_+\|hypothetical-protein	gnl\|CDD\|206646	cd00880, Era_like, E. coli Ras-like protein (Era)-like GTPase. The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngB), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes, but is absent from archaea. The yeast member of TrmE family, MSS1, is involved in mitochondrial translation; bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA, which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and, since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family.	2.27749e-18
NZ_CP027569.1\|WP_155266583.1\|1617381_1617861_+\|hypothetical-protein	gnl\|CDD\|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	2.22025e-10
NZ_CP027569.1\|WP_054335782.1\|1640946_1641402_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	9.75209e-48
NZ_CP027569.1\|WP_027895889.1\|1620222_1621302_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.5726e-19
NZ_CP027569.1\|WP_036220931.1\|1623315_1624959_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|379284	pfam13597, NRDD, Anaerobic ribonucleoside-triphosphate reductase.	2.02998e-152

>NZ_CP027569.1|WP_027895884.1|1625105_1625300_+|hypothetical-protein
MSTSKKIAKNGTKTVVKYGAKKVASRYLGKAAISVAGVTLGAPIIASVVAGFAVEAAFDFLFDD
>NZ_CP027569.1|WP_036220931.1|1623315_1624959_+|anaerobic-ribonucleoside-triphosphate-reductase
MIQVRDLANDLHNAAERIVHCGEKKIQHEVLQSLPEAMRQAHLTQRVHIHDLEFFDDTYNCLGTTVEKLIGQGAFSFRQALRALVREITWVENCQSGGLSLINFDIDMAAYVTDCDELSDMVEDLKEFFLDLNMYTRKGCEKPYVTLNLGLGTSENARLITMATLQAFRSGNQGRPFIFPNIVFKVKEGINHSLHDVNYDLYQQALQTTALCMIPTYFNCDSTSNRTADAEKIGIMGCRSRVVADRFGQAASISRGNIACTTINLPQLALESDGDDKAFYQKIDDMMTLSRDLLLLRYERLIAHGNVSFLLQKHLYAGSESQDIRETLKHGTLAVGFIGLWDALGTLYHTDWPTADAMMPYQEKALDVVRHMRQMTDRFIEQTGLNFSLLASSAEGVTGNFAAFDQEHLGKGKTVSEKGYYTNSFHVPVDTKATVFQKTKLEGPFHTLCNGGSITYVELGEMPDGNAEAVQDIIDCALRQDCNYIGVNFPLDYCMDCGCRGRLGDTCPQCGSTKIKRLRRVSGYLSDEDHLTTGKHHEMSQRKANLF
>NZ_CP027569.1|WP_051525014.1|1622804_1623299_+|radical-SAM-protein
MMDKDMMIRIAGVRKDSSDDGPGLRTVIFFQGCHMHCPGCQNKETQDPNGGVVWTVGELVKKVKEENYTHKVTISGGEPLEQLPGLRCLIRQLENEGFDVGIYTGWNLNQVPLDLFPYLSFIKVGNFQKDLKNPSLHFVGSENQSLYRISHEDGNNVLTSVNLF
>NZ_CP027569.1|WP_027895887.1|1621908_1622673_+|radical-SAM-protein
MKELCWLLTTHCNENCGYCSKFTHLPVITNAEYKRILEILEQYGTKHITFGGGEPFLTERFDDIVRMAKQKGIHLKVVTNGDYLLEHGEILPLLDEITLSLDSVDRQVNEKLGRGADHYSHIQQVLTYFKENRVEANININTVATRYNLDYIQAMIPFIKRAKIHAWRILRFSPLRGRAARNKAEFAISDNDFEQLRMDLKSQDVGCPYRLVDYDGMSQNYLLIAPDGNVYVPDDLKDVKVGHILKDDLKQYFC
>NZ_CP027569.1|WP_027895888.1|1621309_1621903_+|AAA-family-ATPase
MKLVIEGMDGVGKSTIAKKVAKKYHMKYVDGLLKTYFEDKGFSQEEIAAIVKGVESFYDHKDSRIRTWIMGFANIFNLLNYPGDVVIDRHCLTTFFYNGDDQSKPLYKVMQQVAGKPDLIIILTATPETRIHRLKHRDAADRDLQEKEKLTDGYDRFIEAANLLDVPYQLVATDQRNEDQVFQAVCQVIDAYKKTGK
>NZ_CP027569.1|WP_027895889.1|1620222_1621302_+|class-I-SAM-dependent-methyltransferase
MNIQPVFFLKEIQGFSEPTLQFCQALSRRLPLLILADSDSMGGKVNLENVVYKSYDDILKGLKELCLSNDWVLLFSNRDIALGVENFVRIPLPFWTAIDAVNQHSFTNHAKKKLIYNKLSSLYMDSIGNDTDKETHFLEECFKKAEAKTILDCCCGVGRHDYLLGQDGYTVTGIDFSASQIATAKRIHQHANVQYLVDDVRSFDLAKKDYDGAMCMWTTYNYFSKDQDFLAFMRNIWRHLKKGGILVLDSKNIPALNKVRFYSRTSQHDDLTLNLLIYKRILGNIQNSQYFYFLNQNGKKNFYLDEEFIRFYYLQELITLMGQGGKFELISAFGDFDGNPYSEKQSERMITVWQAAKEG
>NZ_CP027569.1|WP_051525015.1|1619801_1620083_+|CRISPR-associated-endonuclease-Cas2
MSVKKYKTLAIYDVVETKRRNKLVKCLQHYLIRIQKSAFEGDITPKQCKTLAKNAGSIIDPQEDLLRIYVIYDVGKLYDWGKRKAQPEEVIIV
>NZ_CP027569.1|WP_027895891.1|1617844_1619722_+|TIGR03986-family-CRISPR-associated-RAMP-protein
MAYQNRNNSYGRNRGYTHNKGHFSSGNDNEKPTTPYNFVTLNTRVVAPPVSAFCKACKNKNDMRAGLQEGYRQYLQDLEQNGKAYSGYFTVDIENLTPLFINSDMDHPSFFTNGEEICIAGSSLRGCLRHVFKIITESAMRVHHENPYAEYTIDGQRIDRDQDMTDQQLFFRAMASPKGVSTKDKYLERIATREAGILVKKGKNKNSNDDYYIYETTYEPIFDKDEANHNVPRIDWSEWHNGTGHVFLFSGRMPNKKRYYQLEAPNFDKARCYHVPEDVIIAYKNDKRRNEKSDLLAKFGTPDAMKMPVGQGLPCFFTLTNRQVESFGASLFYRLPYKSTMADRVPSAVRLSDQSVDFTDAVFGKNTYWRSRVFVEDSYLQTGEEATFEAEAESQTLLEPKPTSYQFYLQSQNGTARDWDDSTSIRGDKIYWHRQCPWQNMGKNNDNKNVNRSLRPLQSNHHFKGKVRFENLSAIELGALASLFSLNSLATSQASRDICYKIGMGKPIGLGSVRIQAALNLQKEESWQTLFSDGHFASGTEEGDMAPFISAFHEYMKEQLQSSPRDWENYCQRMEELCTIMDFSWSTNKKLQEQVGYMDLTEGKKIIQKRIVLPTIAEIIDGLKK
>NZ_CP027569.1|WP_155266583.1|1617381_1617861_+|hypothetical-protein
MDFVLQSQKLHSVVTDTYLPSFEAVLPEQGAYQVLIKYMNALKFGSYEGTAKVFTFGNDRMSVEALELPYLLQLRLFNDDKEILVQREDGRYRVRVIQDEKGDDIEAVDSYSPLLGDIKRKLQTRAYITYDPETGQAGYGHYRYVSVTPEREDTDGISE
>NZ_CP027569.1|WP_027895893.1|1615903_1617376_+|hypothetical-protein
MKQMANIVKKVIFKVPVTLKSPLRIGCGYDDGITDLLVLKAADGRPLVPATSLAGVLRQQVRELYDERLADFCFGQIDDSKKAKPEIGQSRVYVDDLILDIDGEGYLHRDGVAIDDYTGIGIDGAKFDYEAVDRGASGVVQLEITLRAADVEEAQAFDASVFRHTDAVDFWDDFNKTLADIFYTGIHVGSLTAKGFGLLASDSKDVPFYTFDFSKPGEFYKWLDYLDAGQQADYQLPVSPIPYQAESVQYPEDTLVMDMQFGLKSSLLVRDYNAGGPSDLSVISVQMKNHNDFVIPGTTLKGVIRHRAQGLLRKIFSDPERWQDFINHLMGYANESKGVGQQSHLMVHEAYIPSSQVRLHKQTRNRIDRLIGGTIEGALFSEAPIWRNKDFLAPVHFKWSVKKCQDREAGLLFLVMRDLWMGNVPIGGGAAIGRGVLQGQRCHLRFKQWDIVLEGDGEHALSIQGMQKGQEATPQQCMDFLEQCVAEIGR
>NZ_CP027569.1|WP_106669710.1|1627451_1627730_+|hypothetical-protein
MKKLKVKNNVFLIARESWKGSRKLDYYLILKNGKKYYAFSREYSRRCHTLCQGATPINTILKIREHNKAVMNLKKYLERMMPFLIEYYGISA
>NZ_CP027569.1|WP_027895883.1|1630279_1630474_+|hypothetical-protein
MSTSKKIAKNGTKTVVTYGAKKVASRYLGKAAISVAGVTLGAPIIASVVAGFAVEAAFDFLFND
>NZ_CP027569.1|WP_027895882.1|1630521_1633350_+|Hsp70-family-protein
MMDNNYFLGIDLGTTNSVLSYINVKDDGEIRANIVDVPRISDTGSQTSDKMLPSVVYYKKDRDGSFQPLVGDFAKAQYGKRQGFIIKSVKSSMGKDSVSDMNVDLPDQKPEDVSARILNQLVQGAKKKLMLDKIPDDVVITVPASFDGDQCKATLDAAEKAGIHAYGSNGKPKNILLYEPKAVLYDIVNSQMNGEIPSSILDVSTPKTVLVYDIGGGTLDVSLHEISQGEKGELLNIKDLAISRYSQIGGDNFDALIATHLCDEFLESTQGMFNVTEQARKEIMATCLKKAESLKIDMNTAYGIKADRGEVLPDDYEGSISEINLYNGCPFERYVTKAELLDFIRPLMGEGLTMDSAKKLQSLNASQVDNIIYPILDVMAKAQAKCGHEVPIDYVVLNGGMSKFFPVVERLERFFGHKLITLNDPDMSVAKGAAIYHYYLHKYNITSHFDEIGDADTVRTTSKDVTEKASVENNESRKAGQLIASSPTRERANVSMGHIQNDTLNLEVRGGNVYPIVPAGTPLPFKSEPLHVLMLPKDCDVIRLPLYYGSGHTTNWPNRKIAERRLRFQQTYPADTPISIQVAVDEFGIISIRTWITDAETELGTVTMVRGQDERDIRNVGRKKAVLPTGTQGMRLNFRAECNELARLVYQRNGVRRQKNGKADSEISRHIRNIGNRMALATNPEDAGADINEALSRYNNMQTYPAILMGVGAKLYKAWPKGEQMEFHRYCRNIVQSIVKNARYCRILDFHMQAINALAAIGAEEDVPLMVELLKGGNKSASPCAAVALAKMKADATPVIRAFLETDETDIQKLDSYAWAIGKLCSREVGTYHNQYLMEDCAKRCFRYLNSPRLRNYNIKSTLLYTIGELCDSRDVIAQPLSISCNRLAKQSLLDFEDEISYTDAEAICSRKLDLAKAMIDGLALAEDDDAQLLALRQRFDD
>NZ_CP027569.1|WP_027895881.1|1633389_1634526_+|MBL-fold-metallo-hydrolase
MDNLFCALGGGSHIGASCYYLQVDGHSFLLDCGVRSTGSSRLPQLSQLTSEFLDGIWQLDQVILSHAHMDHIGALPYLDAGRDLSILCNPVTQTLTELQLRDFDPLPQQLSSSRQRQLYEAKKERVLSMIHPIGFRTSYETDDYKVTLFPAGHMPGAAMTYIETSKHRILYTGDFSGQKELLCGGYYWPQELPVDVLIIEGTHAYTKDAWQQGYWNIERCLVHQLQLGQTVTLETTNVTKGIELARYLSSALMKSPCWFSGIYLDASMAPIAEAFETAGYQVYTPDIRPLLKPDDLREQAIVIKKGHQGRSYGAVMNGDAFTLHADCQTLTHFINEVQAETTILVHSEPSGMANISNGLDIGNKACIQAVDGETYLFT
>NZ_CP027569.1|WP_027895880.1|1634542_1635637_+|hypothetical-protein
MYYEAIITNLVEKYQHLHDGEIMTAHRLDASVLESVMRKPKASPKSHAEFLHMEYDQVLQILRYFGINSQDLRDLMNQQLKAFSDLFDKRLTYQQDVEQDKQWKRDVQQILGTLREERFQMTRGFYLMALLKFCSDIRYRDLFPTRQIWIQDLSAVEAKNFFRDVDYEINRQEKAFDIADLNDMINDSVQETAVKDDEEETLEDKIQNLEFQLQTTRSTLKFVQRSFDDMVANINARSAEAKEEAVNEFFIQLNSERYGRLLDSAFLVETKMELLRKEKYHFPMQVMTLPILLRNFTNFIKANGFRPIDVVGRTFKASADDLLYIVYEGEPFLGDEKKKVQVTSPGWMKGETVISKPVVKEVVE
>NZ_CP027569.1|WP_027895879.1|1635995_1636178_+|hypothetical-protein
MNDEDVTQLMCLAGSIAVGIACLVGLDQMMNEEKPAQLKPAQDIFIQPETIEDAKFREMK
>NZ_CP027569.1|WP_027895878.1|1636274_1637270_+|CRISPR-associated-endonuclease-Cas1
MCVVYVMNPGAFISKRNGMVCIWQNHKLAKNIPMATLEGLVLMDKVQISSQLVAELLEKKIPTTWVSSRGRFHGHLESYDAVHVFRQRQQVLEQGTLFALDVSKKVVSAKIHNQITLLRRYNRLQESPHIEEIIQQMGYLQKNVPRTVARDKIMGYEGSAARLYFSAFGELVSEPFTFHGRNKRPPKDAVNAMLSFGYTLLFQEVYTAICTYGMNPYFGFLHTLRNHHPALASDLMEEWRAILIDSMVLSIIRRHEMDIQQFHPDEASHGIYMTKAGRAVFLKAYEKKLRSHNSYQRGTLTFRESMRRQVETYSQALMKEDSSLYEPVQIR
>NZ_CP027569.1|WP_027895877.1|1637304_1638915_+|hypothetical-protein
MDMKWNIVAFNKKYEELKNQVSQAMETVENSLEITLDSSILQNLHVDTTQKVNIVFVGQYSAGKSSIIKMLTHDADIQIGAGITTQSYTPYEWQNLEIVDTPGIQTGLREDHDAITDQAIRKADLLVFVTTPGSMNPTLLHYFNKLAYDMGKADQMILVVNKMNSAGKSDVLYQDLQEILAQPYGTYPMKPLESFRPSFISARLYLDAQEEDDKEFYDEMYQKSGYEQFVKTLDDFARDKGLLGKLRTPVRQLEDVLDQLYQIVVSADQGQSENVEQELLQKVFTIEADYKKLNRFLEDELSAATTLIHQIGNDLANDYTAETTASDWETHVKKAGDKEKKIKEALNTSIQESCQNLNREIKEILQHISKNIVADHLPSTGTESADVARATLEGMQLLKHNSDSVLKGIGEFVYSNKTFFKGRAVQRFVTANSTKFNVALGALTQVVGKIYAEHQLQEAKEKRQAIRKAYQDEAETLSKAVHEGVLKPLKNGVNDKVSELKKKISLNQLKDKETKRMTENIASLTDECQKLMDSLD
>NZ_CP027569.1|WP_027895876.1|1638964_1640737_+|hypothetical-protein
MKQDFKEELNNVLMQSTDAAKEGMDIAASQKENVKMVLDKVMAQKNGSHLFSQDMKVPPVYSAYQQKLYELQHTLRTIYREMDEKFYDYRQDLSSFTITVFGKTTVGKSTLMETLIHGKGDSIGKGAQRTTRDVRRYVWDENHIEFVDVPGICAAKSGGLEDSKKAFDAVRTADLVLFLITDDGPQEEEAAALAKIRSMGKPVICILNVKACGADNDFSFKLRLHSIEKRMTHTNDFSDIKKQFYAYAPKYGDDWSDIPFVYADLHTAWLSEQPEYQIYSQTLYQLSRFETVTDTILREICQHGILYQFRTPIDIICHTLRQVDAEMRGQIQASSQLMVELNRSYSQLQQSRKEYQRYQDNRIQRFLTGVADDLKSRASVFVEDHYEDEKAGARWEQVVRQAAIEKRIKKMLEELTDEEQRRLEKFYYSIPDATGIQVQSLKAKIEGNSVYDTRFWMDAGGLVAIAFVFPGFWAALIAGTIWQGITWLLTDSKADKEKKRKKAMRDALYYWIDGTGKGEGQKNQEIFVQQLARIIDQKKEIIFKPFLKTQDVYDQLIRCIGQLNREQQDMQRGIESILNYLQSEISRRVS
>NZ_CP027569.1|WP_054335782.1|1640946_1641402_+|IS200/IS605-family-transposase
MAKKAYDLAHTKWMCKYHIVFTPKYRRKIIYNQYRRDLGSILRQLCNYKGVEIIEGHLMPDHVHMLVSIPPKLSVSSFMGYLKGKSALMMFDRHANLKYKFGNRHFWSEGYYVSTVGLNEKTIRKYIQDQERADIIQDKLSVKEYEDPFKS

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Crispr_ID: NZ_CP027569_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_6

1627954-1630010

TypeIII

Consensus_repeat	Method
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	PILER-CR
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CRISPRCasFinder
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CRT

28 spacers

cas2,csm3gr7,csx19,cas1

The CRISPR arrays of NZ_CP027569_6

>merge|NZ_CP027569|6|1627954-1630010|PILER-CR,CRISPRCasFinder,CRT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTATACCCATAGTCAAAATCGCCATGTGAAAAAGAGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTCGTTTCAGCTTCACTGCTGCTGTCATCAGGAGACTCTATCGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTTTCAGCCGCCCTTTTTGTCTAGCACTGGACGTTAGTCCGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACGTCTTTGACTTCAGACGCGGAAACTTCGAAGTGTGCATTGTAGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTTGAGCTGAACCGTTCGTTTAGACCTGTTGTAAAATGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTCAATTCAATATCTACCCAGCTGTAATTGTAATTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACCAAAGGAGGAGGAATCTATTATGAAAAATTACAAGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTTTTTTTGCCAAGAATGATTGCTTTGAATGTGTTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTATCGTCAGGAAGCGTGCTGATATCGACGTCACTGGTCTTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTGGTGCTGTCTTCTGATTTTAACACTCCAAGATCAATTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACATTAATGCCTTCAGAAGTAGCATCTTCAATCTGTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTCCTGACGGGACTGCAGTTCTTTCTGCAGCTTTTCAAGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTTCAAAAACGCAAACAAAATATTTTACTACTTCTTCCATGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACGGCTGTCTTCCGAATAGTCATCCTCTAAAGGAAACGTTACATGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACCACTTCTCTCTCCTTTGTAGTAGAAACATTAGAATCCTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACATGAATCGTTGCTTCTTATCTATCGGGGATTTAATAGATGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACACCATTTGCGGCCCTTTTTCGGTCCTTTTTTACGAAGGGGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACCCTGTACGAACAGGATAGAATTAAAAAAGAAATGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACATTACTAGGTAAGTCCGGATCTAAGGAGATGTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTTGTCGGTATCATCATGATGATATTCCTGTTGTACAGGAGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACGTCTATGTGGCCATCTCGATCTTGAGAAAGTACTAATTCGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACACCACCGATCAAACTAAATGAATACTTTTCAAAGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTTGTTTTTCCCGCATGATAGACATAATATACTCCTGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACACCTTTAAACCTTCTACTCTGTTTTCAGTTTTGCCAAGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTTGATGGAAATTTCGGATAAATCAATAGCAAAATCTTTCAGGTGTTAATGGCCTTGCCCCACTAGGGGACGGAAACTCCTTTCTAAGTTGTTTACAAATGTTGAAGATGCTTTTAGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACCACCAGGGATAAGCTTGAGCAAGTACCATAGGCGTCTTGATGTGTTAATGGCCTTACCCCATTAGGGGACGGAAACTCCAATAAGTTTTAACATAGAACGTTTTTCACCGTGTTAATGGCCTTGCCCCACTAGGGGACGAAAAC

>NZ_CP027569|6|5|1627954-1630010|PILER-CR
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TATACCCATAGTCAAAATCGCCATGTGAAAAAGA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCGTTTCAGCTTCACTGCTGCTGTCATCAGGAGACTCTATC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTTCAGCCGCCCTTTTTGTCTAGCACTGGACGTTAGTCC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GTCTTTGACTTCAGACGCGGAAACTTCGAAGTGTGCATTGTA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGAGCTGAACCGTTCGTTTAGACCTGTTGTAAAAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCAATTCAATATCTACCCAGCTGTAATTGTAATT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CAAAGGAGGAGGAATCTATTATGAAAAATTACAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTTTTTTGCCAAGAATGATTGCTTTGAATGTGTT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TATCGTCAGGAAGCGTGCTGATATCGACGTCACTGGTCTT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TGGTGCTGTCTTCTGATTTTAACACTCCAAGATCAATT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATTAATGCCTTCAGAAGTAGCATCTTCAATCTGT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCCTGACGGGACTGCAGTTCTTTCTGCAGCTTTTCAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTCAAAAACGCAAACAAAATATTTTACTACTTCTTCCAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GGCTGTCTTCCGAATAGTCATCCTCTAAAGGAAACGTTACAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CACTTCTCTCTCCTTTGTAGTAGAAACATTAGAATCCT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATGAATCGTTGCTTCTTATCTATCGGGGATTTAATAGAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCATTTGCGGCCCTTTTTCGGTCCTTTTTTACGAAGGG
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CCTGTACGAACAGGATAGAATTAAAAAAGAAAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATTACTAGGTAAGTCCGGATCTAAGGAGATGT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGTCGGTATCATCATGATGATATTCCTGTTGTACAGGA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GTCTATGTGGCCATCTCGATCTTGAGAAAGTACTAATTC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCACCGATCAAACTAAATGAATACTTTTCAAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGTTTTTCCCGCATGATAGACATAATATACTCCT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCTTTAAACCTTCTACTCTGTTTTCAGTTTTGCCAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGATGGAAATTTCGGATAAATCAATAGCAAAATCTTTCAG
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCCTTTCTAAGTTGTTTACAAATGTTGAAGATGCTTTTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CACCAGGGATAAGCTTGAGCAAGTACCATAGGCGTCTTGAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TCCAATAAGTTTTAACATAGAACGTTTTTCACC
GTGTTAATGGCCTTGCCCCACTAGGGGACGAAAAC

>NZ_CP027569|6|6|1627954-1630010|CRISPRCasFinder
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TATACCCATAGTCAAAATCGCCATGTGAAAAAGA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCGTTTCAGCTTCACTGCTGCTGTCATCAGGAGACTCTATC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTTCAGCCGCCCTTTTTGTCTAGCACTGGACGTTAGTCC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GTCTTTGACTTCAGACGCGGAAACTTCGAAGTGTGCATTGTA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGAGCTGAACCGTTCGTTTAGACCTGTTGTAAAAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCAATTCAATATCTACCCAGCTGTAATTGTAATT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CAAAGGAGGAGGAATCTATTATGAAAAATTACAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTTTTTTGCCAAGAATGATTGCTTTGAATGTGTT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TATCGTCAGGAAGCGTGCTGATATCGACGTCACTGGTCTT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TGGTGCTGTCTTCTGATTTTAACACTCCAAGATCAATT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATTAATGCCTTCAGAAGTAGCATCTTCAATCTGT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCCTGACGGGACTGCAGTTCTTTCTGCAGCTTTTCAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTCAAAAACGCAAACAAAATATTTTACTACTTCTTCCAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GGCTGTCTTCCGAATAGTCATCCTCTAAAGGAAACGTTACAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CACTTCTCTCTCCTTTGTAGTAGAAACATTAGAATCCT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATGAATCGTTGCTTCTTATCTATCGGGGATTTAATAGAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCATTTGCGGCCCTTTTTCGGTCCTTTTTTACGAAGGG
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CCTGTACGAACAGGATAGAATTAAAAAAGAAAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATTACTAGGTAAGTCCGGATCTAAGGAGATGT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGTCGGTATCATCATGATGATATTCCTGTTGTACAGGA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GTCTATGTGGCCATCTCGATCTTGAGAAAGTACTAATTC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCACCGATCAAACTAAATGAATACTTTTCAAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGTTTTTCCCGCATGATAGACATAATATACTCCT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCTTTAAACCTTCTACTCTGTTTTCAGTTTTGCCAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGATGGAAATTTCGGATAAATCAATAGCAAAATCTTTCAG
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCCTTTCTAAGTTGTTTACAAATGTTGAAGATGCTTTTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CACCAGGGATAAGCTTGAGCAAGTACCATAGGCGTCTTGAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TCCAATAAGTTTTAACATAGAACGTTTTTCACC
GTGTTAATGGCCTTGCCCCACTAGGGGACGAAAAC

>NZ_CP027569|6|4|1627954-1630010|CRT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TATACCCATAGTCAAAATCGCCATGTGAAAAAGA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCGTTTCAGCTTCACTGCTGCTGTCATCAGGAGACTCTATC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTTCAGCCGCCCTTTTTGTCTAGCACTGGACGTTAGTCC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GTCTTTGACTTCAGACGCGGAAACTTCGAAGTGTGCATTGTA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGAGCTGAACCGTTCGTTTAGACCTGTTGTAAAAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCAATTCAATATCTACCCAGCTGTAATTGTAATT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CAAAGGAGGAGGAATCTATTATGAAAAATTACAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTTTTTTGCCAAGAATGATTGCTTTGAATGTGTT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TATCGTCAGGAAGCGTGCTGATATCGACGTCACTGGTCTT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TGGTGCTGTCTTCTGATTTTAACACTCCAAGATCAATT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATTAATGCCTTCAGAAGTAGCATCTTCAATCTGT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCCTGACGGGACTGCAGTTCTTTCTGCAGCTTTTCAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTCAAAAACGCAAACAAAATATTTTACTACTTCTTCCAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GGCTGTCTTCCGAATAGTCATCCTCTAAAGGAAACGTTACAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CACTTCTCTCTCCTTTGTAGTAGAAACATTAGAATCCT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATGAATCGTTGCTTCTTATCTATCGGGGATTTAATAGAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCATTTGCGGCCCTTTTTCGGTCCTTTTTTACGAAGGG
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	CCTGTACGAACAGGATAGAATTAAAAAAGAAAT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ATTACTAGGTAAGTCCGGATCTAAGGAGATGT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGTCGGTATCATCATGATGATATTCCTGTTGTACAGGA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	GTCTATGTGGCCATCTCGATCTTGAGAAAGTACTAATTC
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCACCGATCAAACTAAATGAATACTTTTCAAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGTTTTTCCCGCATGATAGACATAATATACTCCT
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	ACCTTTAAACCTTCTACTCTGTTTTCAGTTTTGCCAA
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TTGATGGAAATTTCGGATAAATCAATAGCAAAATCTTTCAG
GTGTTAATGGCCTTGCCCCACTAGGGGACGGAAAC	TCCTTTCTAAGTTGTTTACAAATGTTGAAGATGCTTTTA
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	CACCAGGGATAAGCTTGAGCAAGTACCATAGGCGTCTTGAT
GTGTTAATGGCCTTACCCCATTAGGGGACGGAAAC	TCCAATAAGTTTTAACATAGAACGTTTTTCACC
GTGTTAATGGCCTTGCCCCACTAGGGGACGAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_051525014.1\|1622804_1623299_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|379137
NZ_CP027569.1\|WP_027895887.1\|1621908_1622673_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP027569.1\|WP_027895432.1\|1641634_1642201_+\|DUF4145-domain-containing-protein	unknown	unknown	gnl\|CDD\|236912
NZ_CP027569.1\|WP_027895891.1\|1617844_1619722_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NZ_CP027569.1\|WP_027895880.1\|1634542_1635637_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_106669710.1\|1627451_1627730_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895879.1\|1635995_1636178_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895884.1\|1625105_1625300_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895877.1\|1637304_1638915_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206739
NZ_CP027569.1\|WP_027895889.1\|1620222_1621302_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP027569.1\|WP_051525015.1\|1619801_1620083_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP027569.1\|WP_027895881.1\|1633389_1634526_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293853
NZ_CP027569.1\|WP_027895876.1\|1638964_1640737_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206646
NZ_CP027569.1\|WP_155266583.1\|1617381_1617861_+\|hypothetical-protein	csx19	cls001376_csx19_CAS-III-D	gnl\|CDD\|274900
NZ_CP027569.1\|WP_027895882.1\|1630521_1633350_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212667
NZ_CP027569.1\|WP_027895883.1\|1630279_1630474_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895888.1\|1621309_1621903_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|238835
NZ_CP027569.1\|WP_027895878.1\|1636274_1637270_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP027569.1\|WP_054335782.1\|1640946_1641402_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP027569.1\|WP_036220931.1\|1623315_1624959_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|379284

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_051525014.1\|1622804_1623299_+\|radical-SAM-protein	gnl\|CDD\|379137	pfam13353, Fer4_12, 4Fe-4S single cluster domain. This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	1.35202e-30
NZ_CP027569.1\|WP_027895887.1\|1621908_1622673_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	5.29519e-19
NZ_CP027569.1\|WP_027895432.1\|1641634_1642201_+\|DUF4145-domain-containing-protein	gnl\|CDD\|236912	PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional.	4.46117e-08
NZ_CP027569.1\|WP_027895891.1\|1617844_1619722_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	4.71407e-67
NZ_CP027569.1\|WP_027895878.1\|1636274_1637270_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.60503e-109
NZ_CP027569.1\|WP_027895882.1\|1630521_1633350_+\|Hsp70-family-protein	gnl\|CDD\|212667	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family. HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs.	9.18855e-66
NZ_CP027569.1\|WP_027895877.1\|1637304_1638915_+\|hypothetical-protein	gnl\|CDD\|206739	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins. The dynamin family of large mechanochemical GTPases includes the classical dynamins and dynamin-like proteins (DLPs) that are found throughout the Eukarya. This family also includes bacterial DLPs. These proteins catalyze membrane fission during clathrin-mediated endocytosis. Dynamin consists of five domains; an N-terminal G domain that binds and hydrolyzes GTP, a middle domain (MD) involved in self-assembly and oligomerization, a pleckstrin homology (PH) domain responsible for interactions with the plasma membrane, GED, which is also involved in self-assembly, and a proline arginine rich domain (PRD) that interacts with SH3 domains on accessory proteins. To date, three vertebrate dynamin genes have been identified; dynamin 1, which is brain specific, mediates uptake of synaptic vesicles in presynaptic terminals; dynamin-2 is expressed ubiquitously and similarly participates in membrane fission; mutations in the MD, PH and GED domains of dynamin 2 have been linked to human diseases such as Charcot-Marie-Tooth peripheral neuropathy and rare forms of centronuclear myopathy. Dynamin 3 participates in megakaryocyte progenitor amplification, and is also involved in cytoplasmic enlargement and the formation of the demarcation membrane system. This family also includes mitofusins (MFN1 and MFN2 in mammals) that are involved in mitochondrial fusion. Dynamin oligomerizes into helical structures around the neck of budding vesicles in a GTP hydrolysis-dependent manner.	8.82896e-15
NZ_CP027569.1\|WP_027895888.1\|1621309_1621903_+\|AAA-family-ATPase	gnl\|CDD\|238835	cd01672, TMPK, Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step in either de novo or salvage biosynthesis of thymidine triphosphate (TTP).	3.08866e-09
NZ_CP027569.1\|WP_051525015.1\|1619801_1620083_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.80967e-18
NZ_CP027569.1\|WP_027895881.1\|1633389_1634526_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293853	cd16295, TTHA0252-CPSF-like_MBL-fold, Thermus thermophilus TTHA0252 and related cleavage and polyadenylation specificity factors; MBL-fold metallo-hydrolase domain. Includes the archaeal cleavage and polyadenylation specificity factors (CPSFs) such as Methanothermobacter thermautotrophicus MTH1203, and Pyrococcus horikoshii PH1404. In addition to the MBL-fold metallo-hydrolase nuclease and the beta-CASP domains, members of this subgroup contain two contiguous KH domains. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	2.26402e-43
NZ_CP027569.1\|WP_027895876.1\|1638964_1640737_+\|hypothetical-protein	gnl\|CDD\|206646	cd00880, Era_like, E. coli Ras-like protein (Era)-like GTPase. The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngB), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes, but is absent from archaea. The yeast member of TrmE family, MSS1, is involved in mitochondrial translation; bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA, which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and, since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family.	2.27749e-18
NZ_CP027569.1\|WP_155266583.1\|1617381_1617861_+\|hypothetical-protein	gnl\|CDD\|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	2.22025e-10
NZ_CP027569.1\|WP_054335782.1\|1640946_1641402_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	9.75209e-48
NZ_CP027569.1\|WP_027895889.1\|1620222_1621302_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.5726e-19
NZ_CP027569.1\|WP_036220931.1\|1623315_1624959_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|379284	pfam13597, NRDD, Anaerobic ribonucleoside-triphosphate reductase.	2.02998e-152

>NZ_CP027569.1|WP_106669710.1|1627451_1627730_+|hypothetical-protein
MKKLKVKNNVFLIARESWKGSRKLDYYLILKNGKKYYAFSREYSRRCHTLCQGATPINTILKIREHNKAVMNLKKYLERMMPFLIEYYGISA
>NZ_CP027569.1|WP_027895884.1|1625105_1625300_+|hypothetical-protein
MSTSKKIAKNGTKTVVKYGAKKVASRYLGKAAISVAGVTLGAPIIASVVAGFAVEAAFDFLFDD
>NZ_CP027569.1|WP_036220931.1|1623315_1624959_+|anaerobic-ribonucleoside-triphosphate-reductase
MIQVRDLANDLHNAAERIVHCGEKKIQHEVLQSLPEAMRQAHLTQRVHIHDLEFFDDTYNCLGTTVEKLIGQGAFSFRQALRALVREITWVENCQSGGLSLINFDIDMAAYVTDCDELSDMVEDLKEFFLDLNMYTRKGCEKPYVTLNLGLGTSENARLITMATLQAFRSGNQGRPFIFPNIVFKVKEGINHSLHDVNYDLYQQALQTTALCMIPTYFNCDSTSNRTADAEKIGIMGCRSRVVADRFGQAASISRGNIACTTINLPQLALESDGDDKAFYQKIDDMMTLSRDLLLLRYERLIAHGNVSFLLQKHLYAGSESQDIRETLKHGTLAVGFIGLWDALGTLYHTDWPTADAMMPYQEKALDVVRHMRQMTDRFIEQTGLNFSLLASSAEGVTGNFAAFDQEHLGKGKTVSEKGYYTNSFHVPVDTKATVFQKTKLEGPFHTLCNGGSITYVELGEMPDGNAEAVQDIIDCALRQDCNYIGVNFPLDYCMDCGCRGRLGDTCPQCGSTKIKRLRRVSGYLSDEDHLTTGKHHEMSQRKANLF
>NZ_CP027569.1|WP_051525014.1|1622804_1623299_+|radical-SAM-protein
MMDKDMMIRIAGVRKDSSDDGPGLRTVIFFQGCHMHCPGCQNKETQDPNGGVVWTVGELVKKVKEENYTHKVTISGGEPLEQLPGLRCLIRQLENEGFDVGIYTGWNLNQVPLDLFPYLSFIKVGNFQKDLKNPSLHFVGSENQSLYRISHEDGNNVLTSVNLF
>NZ_CP027569.1|WP_027895887.1|1621908_1622673_+|radical-SAM-protein
MKELCWLLTTHCNENCGYCSKFTHLPVITNAEYKRILEILEQYGTKHITFGGGEPFLTERFDDIVRMAKQKGIHLKVVTNGDYLLEHGEILPLLDEITLSLDSVDRQVNEKLGRGADHYSHIQQVLTYFKENRVEANININTVATRYNLDYIQAMIPFIKRAKIHAWRILRFSPLRGRAARNKAEFAISDNDFEQLRMDLKSQDVGCPYRLVDYDGMSQNYLLIAPDGNVYVPDDLKDVKVGHILKDDLKQYFC
>NZ_CP027569.1|WP_027895888.1|1621309_1621903_+|AAA-family-ATPase
MKLVIEGMDGVGKSTIAKKVAKKYHMKYVDGLLKTYFEDKGFSQEEIAAIVKGVESFYDHKDSRIRTWIMGFANIFNLLNYPGDVVIDRHCLTTFFYNGDDQSKPLYKVMQQVAGKPDLIIILTATPETRIHRLKHRDAADRDLQEKEKLTDGYDRFIEAANLLDVPYQLVATDQRNEDQVFQAVCQVIDAYKKTGK
>NZ_CP027569.1|WP_027895889.1|1620222_1621302_+|class-I-SAM-dependent-methyltransferase
MNIQPVFFLKEIQGFSEPTLQFCQALSRRLPLLILADSDSMGGKVNLENVVYKSYDDILKGLKELCLSNDWVLLFSNRDIALGVENFVRIPLPFWTAIDAVNQHSFTNHAKKKLIYNKLSSLYMDSIGNDTDKETHFLEECFKKAEAKTILDCCCGVGRHDYLLGQDGYTVTGIDFSASQIATAKRIHQHANVQYLVDDVRSFDLAKKDYDGAMCMWTTYNYFSKDQDFLAFMRNIWRHLKKGGILVLDSKNIPALNKVRFYSRTSQHDDLTLNLLIYKRILGNIQNSQYFYFLNQNGKKNFYLDEEFIRFYYLQELITLMGQGGKFELISAFGDFDGNPYSEKQSERMITVWQAAKEG
>NZ_CP027569.1|WP_051525015.1|1619801_1620083_+|CRISPR-associated-endonuclease-Cas2
MSVKKYKTLAIYDVVETKRRNKLVKCLQHYLIRIQKSAFEGDITPKQCKTLAKNAGSIIDPQEDLLRIYVIYDVGKLYDWGKRKAQPEEVIIV
>NZ_CP027569.1|WP_027895891.1|1617844_1619722_+|TIGR03986-family-CRISPR-associated-RAMP-protein
MAYQNRNNSYGRNRGYTHNKGHFSSGNDNEKPTTPYNFVTLNTRVVAPPVSAFCKACKNKNDMRAGLQEGYRQYLQDLEQNGKAYSGYFTVDIENLTPLFINSDMDHPSFFTNGEEICIAGSSLRGCLRHVFKIITESAMRVHHENPYAEYTIDGQRIDRDQDMTDQQLFFRAMASPKGVSTKDKYLERIATREAGILVKKGKNKNSNDDYYIYETTYEPIFDKDEANHNVPRIDWSEWHNGTGHVFLFSGRMPNKKRYYQLEAPNFDKARCYHVPEDVIIAYKNDKRRNEKSDLLAKFGTPDAMKMPVGQGLPCFFTLTNRQVESFGASLFYRLPYKSTMADRVPSAVRLSDQSVDFTDAVFGKNTYWRSRVFVEDSYLQTGEEATFEAEAESQTLLEPKPTSYQFYLQSQNGTARDWDDSTSIRGDKIYWHRQCPWQNMGKNNDNKNVNRSLRPLQSNHHFKGKVRFENLSAIELGALASLFSLNSLATSQASRDICYKIGMGKPIGLGSVRIQAALNLQKEESWQTLFSDGHFASGTEEGDMAPFISAFHEYMKEQLQSSPRDWENYCQRMEELCTIMDFSWSTNKKLQEQVGYMDLTEGKKIIQKRIVLPTIAEIIDGLKK
>NZ_CP027569.1|WP_155266583.1|1617381_1617861_+|hypothetical-protein
MDFVLQSQKLHSVVTDTYLPSFEAVLPEQGAYQVLIKYMNALKFGSYEGTAKVFTFGNDRMSVEALELPYLLQLRLFNDDKEILVQREDGRYRVRVIQDEKGDDIEAVDSYSPLLGDIKRKLQTRAYITYDPETGQAGYGHYRYVSVTPEREDTDGISE
>NZ_CP027569.1|WP_027895883.1|1630279_1630474_+|hypothetical-protein
MSTSKKIAKNGTKTVVTYGAKKVASRYLGKAAISVAGVTLGAPIIASVVAGFAVEAAFDFLFND
>NZ_CP027569.1|WP_027895882.1|1630521_1633350_+|Hsp70-family-protein
MMDNNYFLGIDLGTTNSVLSYINVKDDGEIRANIVDVPRISDTGSQTSDKMLPSVVYYKKDRDGSFQPLVGDFAKAQYGKRQGFIIKSVKSSMGKDSVSDMNVDLPDQKPEDVSARILNQLVQGAKKKLMLDKIPDDVVITVPASFDGDQCKATLDAAEKAGIHAYGSNGKPKNILLYEPKAVLYDIVNSQMNGEIPSSILDVSTPKTVLVYDIGGGTLDVSLHEISQGEKGELLNIKDLAISRYSQIGGDNFDALIATHLCDEFLESTQGMFNVTEQARKEIMATCLKKAESLKIDMNTAYGIKADRGEVLPDDYEGSISEINLYNGCPFERYVTKAELLDFIRPLMGEGLTMDSAKKLQSLNASQVDNIIYPILDVMAKAQAKCGHEVPIDYVVLNGGMSKFFPVVERLERFFGHKLITLNDPDMSVAKGAAIYHYYLHKYNITSHFDEIGDADTVRTTSKDVTEKASVENNESRKAGQLIASSPTRERANVSMGHIQNDTLNLEVRGGNVYPIVPAGTPLPFKSEPLHVLMLPKDCDVIRLPLYYGSGHTTNWPNRKIAERRLRFQQTYPADTPISIQVAVDEFGIISIRTWITDAETELGTVTMVRGQDERDIRNVGRKKAVLPTGTQGMRLNFRAECNELARLVYQRNGVRRQKNGKADSEISRHIRNIGNRMALATNPEDAGADINEALSRYNNMQTYPAILMGVGAKLYKAWPKGEQMEFHRYCRNIVQSIVKNARYCRILDFHMQAINALAAIGAEEDVPLMVELLKGGNKSASPCAAVALAKMKADATPVIRAFLETDETDIQKLDSYAWAIGKLCSREVGTYHNQYLMEDCAKRCFRYLNSPRLRNYNIKSTLLYTIGELCDSRDVIAQPLSISCNRLAKQSLLDFEDEISYTDAEAICSRKLDLAKAMIDGLALAEDDDAQLLALRQRFDD
>NZ_CP027569.1|WP_027895881.1|1633389_1634526_+|MBL-fold-metallo-hydrolase
MDNLFCALGGGSHIGASCYYLQVDGHSFLLDCGVRSTGSSRLPQLSQLTSEFLDGIWQLDQVILSHAHMDHIGALPYLDAGRDLSILCNPVTQTLTELQLRDFDPLPQQLSSSRQRQLYEAKKERVLSMIHPIGFRTSYETDDYKVTLFPAGHMPGAAMTYIETSKHRILYTGDFSGQKELLCGGYYWPQELPVDVLIIEGTHAYTKDAWQQGYWNIERCLVHQLQLGQTVTLETTNVTKGIELARYLSSALMKSPCWFSGIYLDASMAPIAEAFETAGYQVYTPDIRPLLKPDDLREQAIVIKKGHQGRSYGAVMNGDAFTLHADCQTLTHFINEVQAETTILVHSEPSGMANISNGLDIGNKACIQAVDGETYLFT
>NZ_CP027569.1|WP_027895880.1|1634542_1635637_+|hypothetical-protein
MYYEAIITNLVEKYQHLHDGEIMTAHRLDASVLESVMRKPKASPKSHAEFLHMEYDQVLQILRYFGINSQDLRDLMNQQLKAFSDLFDKRLTYQQDVEQDKQWKRDVQQILGTLREERFQMTRGFYLMALLKFCSDIRYRDLFPTRQIWIQDLSAVEAKNFFRDVDYEINRQEKAFDIADLNDMINDSVQETAVKDDEEETLEDKIQNLEFQLQTTRSTLKFVQRSFDDMVANINARSAEAKEEAVNEFFIQLNSERYGRLLDSAFLVETKMELLRKEKYHFPMQVMTLPILLRNFTNFIKANGFRPIDVVGRTFKASADDLLYIVYEGEPFLGDEKKKVQVTSPGWMKGETVISKPVVKEVVE
>NZ_CP027569.1|WP_027895879.1|1635995_1636178_+|hypothetical-protein
MNDEDVTQLMCLAGSIAVGIACLVGLDQMMNEEKPAQLKPAQDIFIQPETIEDAKFREMK
>NZ_CP027569.1|WP_027895878.1|1636274_1637270_+|CRISPR-associated-endonuclease-Cas1
MCVVYVMNPGAFISKRNGMVCIWQNHKLAKNIPMATLEGLVLMDKVQISSQLVAELLEKKIPTTWVSSRGRFHGHLESYDAVHVFRQRQQVLEQGTLFALDVSKKVVSAKIHNQITLLRRYNRLQESPHIEEIIQQMGYLQKNVPRTVARDKIMGYEGSAARLYFSAFGELVSEPFTFHGRNKRPPKDAVNAMLSFGYTLLFQEVYTAICTYGMNPYFGFLHTLRNHHPALASDLMEEWRAILIDSMVLSIIRRHEMDIQQFHPDEASHGIYMTKAGRAVFLKAYEKKLRSHNSYQRGTLTFRESMRRQVETYSQALMKEDSSLYEPVQIR
>NZ_CP027569.1|WP_027895877.1|1637304_1638915_+|hypothetical-protein
MDMKWNIVAFNKKYEELKNQVSQAMETVENSLEITLDSSILQNLHVDTTQKVNIVFVGQYSAGKSSIIKMLTHDADIQIGAGITTQSYTPYEWQNLEIVDTPGIQTGLREDHDAITDQAIRKADLLVFVTTPGSMNPTLLHYFNKLAYDMGKADQMILVVNKMNSAGKSDVLYQDLQEILAQPYGTYPMKPLESFRPSFISARLYLDAQEEDDKEFYDEMYQKSGYEQFVKTLDDFARDKGLLGKLRTPVRQLEDVLDQLYQIVVSADQGQSENVEQELLQKVFTIEADYKKLNRFLEDELSAATTLIHQIGNDLANDYTAETTASDWETHVKKAGDKEKKIKEALNTSIQESCQNLNREIKEILQHISKNIVADHLPSTGTESADVARATLEGMQLLKHNSDSVLKGIGEFVYSNKTFFKGRAVQRFVTANSTKFNVALGALTQVVGKIYAEHQLQEAKEKRQAIRKAYQDEAETLSKAVHEGVLKPLKNGVNDKVSELKKKISLNQLKDKETKRMTENIASLTDECQKLMDSLD
>NZ_CP027569.1|WP_027895876.1|1638964_1640737_+|hypothetical-protein
MKQDFKEELNNVLMQSTDAAKEGMDIAASQKENVKMVLDKVMAQKNGSHLFSQDMKVPPVYSAYQQKLYELQHTLRTIYREMDEKFYDYRQDLSSFTITVFGKTTVGKSTLMETLIHGKGDSIGKGAQRTTRDVRRYVWDENHIEFVDVPGICAAKSGGLEDSKKAFDAVRTADLVLFLITDDGPQEEEAAALAKIRSMGKPVICILNVKACGADNDFSFKLRLHSIEKRMTHTNDFSDIKKQFYAYAPKYGDDWSDIPFVYADLHTAWLSEQPEYQIYSQTLYQLSRFETVTDTILREICQHGILYQFRTPIDIICHTLRQVDAEMRGQIQASSQLMVELNRSYSQLQQSRKEYQRYQDNRIQRFLTGVADDLKSRASVFVEDHYEDEKAGARWEQVVRQAAIEKRIKKMLEELTDEEQRRLEKFYYSIPDATGIQVQSLKAKIEGNSVYDTRFWMDAGGLVAIAFVFPGFWAALIAGTIWQGITWLLTDSKADKEKKRKKAMRDALYYWIDGTGKGEGQKNQEIFVQQLARIIDQKKEIIFKPFLKTQDVYDQLIRCIGQLNREQQDMQRGIESILNYLQSEISRRVS
>NZ_CP027569.1|WP_054335782.1|1640946_1641402_+|IS200/IS605-family-transposase
MAKKAYDLAHTKWMCKYHIVFTPKYRRKIIYNQYRRDLGSILRQLCNYKGVEIIEGHLMPDHVHMLVSIPPKLSVSSFMGYLKGKSALMMFDRHANLKYKFGNRHFWSEGYYVSTVGLNEKTIRKYIQDQERADIIQDKLSVKEYEDPFKS
>NZ_CP027569.1|WP_027895432.1|1641634_1642201_+|DUF4145-domain-containing-protein
MTKRFEFLKNAKTMKLYDLCCEADRLVRIDAASSMMKVRQALEVMVRGFDEKKKNLFENLKNIEKRKVWDERHIDLAQQLRIMSNVAVHGGYCKKSEAAECVDLLHDFTKWYVVQLPCYISWKKTQEEERRRAEERRRMEAMRRRKEAEEKARLEDEKKKKHSNIAGWVGVTILGAVAAAAIGIFLDD

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Crispr_ID: NZ_CP027569_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_7

1642719-1643479

Unclear

Consensus_repeat	Method
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	PILER-CR
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	CRISPRCasFinder
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	CRT

10 spacers

cas1,WYL

The CRISPR arrays of NZ_CP027569_7

>merge|NZ_CP027569|7|1642719-1643479|PILER-CR,CRISPRCasFinder,CRT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAACTTCCTCGTTCTTCTTTTGATTCTACCCGTGAAATTGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACATGGCGATATTCTTTCTCATTATCAATATCCCCAATCCAATGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACTATATTTAGCTCCTTTTTTTGTAACCCATTCTTCGGCAGCGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACAAGTAGCATGTTTCACAACGTTCTACTTCTTTTCTTTGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACATTTTCCCGATTGGGTAGTCTCTAAGTTGTCCGACCTGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACTCCTGTCAGGTCTCTTGTCTTCATGTATTCCATGTAAGAGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACTTGGTCGTAAAAATTTCAAACATCTTCGTTTCTTCAGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACAGATATTCTTTATCGTCGATCAGATATCTTTCTGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACTTTTATTTGAATTTATAACGTACCCAGTCAGGGACGTCTTGTGTTAATGGCCTTACCCCAACAGGGGACGGAAACTGTCGTCCGGGAGCCCTTCGATGTGACCCAGCGTCTGCGTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC

>NZ_CP027569|7|6|1642719-1643479|PILER-CR
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTCCTCGTTCTTCTTTTGATTCTACCCGTGAAATT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	ATGGCGATATTCTTTCTCATTATCAATATCCCCAATCCAAT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TATATTTAGCTCCTTTTTTTGTAACCCATTCTTCGGCAGC
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	AAGTAGCATGTTTCACAACGTTCTACTTCTTTTCTTT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	ATTTTCCCGATTGGGTAGTCTCTAAGTTGTCCGACCT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TCCTGTCAGGTCTCTTGTCTTCATGTATTCCATGTAAGA
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTGGTCGTAAAAATTTCAAACATCTTCGTTTCTTCA
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	AGATATTCTTTATCGTCGATCAGATATCTTTCT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTTTATTTGAATTTATAACGTACCCAGTCAGGGACGTCTT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TGTCGTCCGGGAGCCCTTCGATGTGACCCAGCGTCTGC
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC

>NZ_CP027569|7|7|1642719-1643479|CRISPRCasFinder
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTCCTCGTTCTTCTTTTGATTCTACCCGTGAAATT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	ATGGCGATATTCTTTCTCATTATCAATATCCCCAATCCAAT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TATATTTAGCTCCTTTTTTTGTAACCCATTCTTCGGCAGC
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	AAGTAGCATGTTTCACAACGTTCTACTTCTTTTCTTT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	ATTTTCCCGATTGGGTAGTCTCTAAGTTGTCCGACCT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TCCTGTCAGGTCTCTTGTCTTCATGTATTCCATGTAAGA
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTGGTCGTAAAAATTTCAAACATCTTCGTTTCTTCA
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	AGATATTCTTTATCGTCGATCAGATATCTTTCT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTTTATTTGAATTTATAACGTACCCAGTCAGGGACGTCTT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TGTCGTCCGGGAGCCCTTCGATGTGACCCAGCGTCTGC
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC

>NZ_CP027569|7|5|1642719-1643479|CRT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTCCTCGTTCTTCTTTTGATTCTACCCGTGAAATT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	ATGGCGATATTCTTTCTCATTATCAATATCCCCAATCCAAT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TATATTTAGCTCCTTTTTTTGTAACCCATTCTTCGGCAGC
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	AAGTAGCATGTTTCACAACGTTCTACTTCTTTTCTTT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	ATTTTCCCGATTGGGTAGTCTCTAAGTTGTCCGACCT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TCCTGTCAGGTCTCTTGTCTTCATGTATTCCATGTAAGA
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTGGTCGTAAAAATTTCAAACATCTTCGTTTCTTCA
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	AGATATTCTTTATCGTCGATCAGATATCTTTCT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TTTTATTTGAATTTATAACGTACCCAGTCAGGGACGTCTT
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC	TGTCGTCCGGGAGCCCTTCGATGTGACCCAGCGTCTGC
GTGTTAATGGCCTTACCCCAACAGGGGACGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_036220619.1\|1653973_1654186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895879.1\|1635995_1636178_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895436.1\|1646121_1647792_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|313108
NZ_CP027569.1\|WP_027895876.1\|1638964_1640737_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206646
NZ_CP027569.1\|WP_027895440.1\|1650734_1651811_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP027569.1\|WP_027895878.1\|1636274_1637270_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP027569.1\|WP_027895882.1\|1630521_1633350_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212667
NZ_CP027569.1\|WP_027895877.1\|1637304_1638915_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206739
NZ_CP027569.1\|WP_014016479.1\|1651917_1652100_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP027569.1\|WP_027895435.1\|1645059_1646019_+\|WYL-domain-containing-transcriptional-regulator	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP027569.1\|WP_155266569.1\|1643709_1644960_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895437.1\|1647887_1649417_+\|methylmalonyl-CoA-carboxyltransferase	unknown	unknown	gnl\|CDD\|130187
NZ_CP027569.1\|WP_027895880.1\|1634542_1635637_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895881.1\|1633389_1634526_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293853
NZ_CP027569.1\|WP_027895432.1\|1641634_1642201_+\|DUF4145-domain-containing-protein	unknown	unknown	gnl\|CDD\|236912
NZ_CP027569.1\|WP_027895443.1\|1652908_1653946_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226612
NZ_CP027569.1\|WP_027895439.1\|1649950_1650358_+\|biotin/lipoyl-binding-protein	unknown	unknown	gnl\|CDD\|236449
NZ_CP027569.1\|WP_054335782.1\|1640946_1641402_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP027569.1\|WP_027895883.1\|1630279_1630474_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895441.1\|1652150_1652603_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_027895439.1\|1649950_1650358_+\|biotin/lipoyl-binding-protein	gnl\|CDD\|236449	PRK09282, PRK09282, pyruvate carboxylase subunit B; Validated.	5.28214e-29
NZ_CP027569.1\|WP_027895876.1\|1638964_1640737_+\|hypothetical-protein	gnl\|CDD\|206646	cd00880, Era_like, E. coli Ras-like protein (Era)-like GTPase. The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngB), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes, but is absent from archaea. The yeast member of TrmE family, MSS1, is involved in mitochondrial translation; bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA, which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and, since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family.	2.27749e-18
NZ_CP027569.1\|WP_027895878.1\|1636274_1637270_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.60503e-109
NZ_CP027569.1\|WP_027895882.1\|1630521_1633350_+\|Hsp70-family-protein	gnl\|CDD\|212667	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family. HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs.	9.18855e-66
NZ_CP027569.1\|WP_027895877.1\|1637304_1638915_+\|hypothetical-protein	gnl\|CDD\|206739	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins. The dynamin family of large mechanochemical GTPases includes the classical dynamins and dynamin-like proteins (DLPs) that are found throughout the Eukarya. This family also includes bacterial DLPs. These proteins catalyze membrane fission during clathrin-mediated endocytosis. Dynamin consists of five domains; an N-terminal G domain that binds and hydrolyzes GTP, a middle domain (MD) involved in self-assembly and oligomerization, a pleckstrin homology (PH) domain responsible for interactions with the plasma membrane, GED, which is also involved in self-assembly, and a proline arginine rich domain (PRD) that interacts with SH3 domains on accessory proteins. To date, three vertebrate dynamin genes have been identified; dynamin 1, which is brain specific, mediates uptake of synaptic vesicles in presynaptic terminals; dynamin-2 is expressed ubiquitously and similarly participates in membrane fission; mutations in the MD, PH and GED domains of dynamin 2 have been linked to human diseases such as Charcot-Marie-Tooth peripheral neuropathy and rare forms of centronuclear myopathy. Dynamin 3 participates in megakaryocyte progenitor amplification, and is also involved in cytoplasmic enlargement and the formation of the demarcation membrane system. This family also includes mitofusins (MFN1 and MFN2 in mammals) that are involved in mitochondrial fusion. Dynamin oligomerizes into helical structures around the neck of budding vesicles in a GTP hydrolysis-dependent manner.	8.82896e-15
NZ_CP027569.1\|WP_014016479.1\|1651917_1652100_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	1.78677e-12
NZ_CP027569.1\|WP_027895435.1\|1645059_1646019_+\|WYL-domain-containing-transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.04546e-12
NZ_CP027569.1\|WP_027895437.1\|1647887_1649417_+\|methylmalonyl-CoA-carboxyltransferase	gnl\|CDD\|130187	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. [Energy metabolism, ATP-proton motive force interconversion, Energy metabolism, Fermentation, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP027569.1\|WP_027895881.1\|1633389_1634526_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293853	cd16295, TTHA0252-CPSF-like_MBL-fold, Thermus thermophilus TTHA0252 and related cleavage and polyadenylation specificity factors; MBL-fold metallo-hydrolase domain. Includes the archaeal cleavage and polyadenylation specificity factors (CPSFs) such as Methanothermobacter thermautotrophicus MTH1203, and Pyrococcus horikoshii PH1404. In addition to the MBL-fold metallo-hydrolase nuclease and the beta-CASP domains, members of this subgroup contain two contiguous KH domains. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	2.26402e-43
NZ_CP027569.1\|WP_027895432.1\|1641634_1642201_+\|DUF4145-domain-containing-protein	gnl\|CDD\|236912	PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional.	4.46117e-08
NZ_CP027569.1\|WP_027895443.1\|1652908_1653946_-\|hypothetical-protein	gnl\|CDD\|226612	COG4127, COG4127, Uncharacterized conserved protein [Function unknown].	0.000129981
NZ_CP027569.1\|WP_027895436.1\|1646121_1647792_+\|AAA-family-ATPase	gnl\|CDD\|313108	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase. This family contains many hypothetical bacterial proteins. This family was previously the N-terminal part of the Pfam DUF1703 (pfam08011) family before it was split into two. This region is predicted to be an AAA-ATPase domain.	6.36093e-73
NZ_CP027569.1\|WP_054335782.1\|1640946_1641402_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	9.75209e-48
NZ_CP027569.1\|WP_027895440.1\|1650734_1651811_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.41928e-38
NZ_CP027569.1\|WP_027895441.1\|1652150_1652603_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	3.45993e-12

>NZ_CP027569.1|WP_027895432.1|1641634_1642201_+|DUF4145-domain-containing-protein
MTKRFEFLKNAKTMKLYDLCCEADRLVRIDAASSMMKVRQALEVMVRGFDEKKKNLFENLKNIEKRKVWDERHIDLAQQLRIMSNVAVHGGYCKKSEAAECVDLLHDFTKWYVVQLPCYISWKKTQEEERRRAEERRRMEAMRRRKEAEEKARLEDEKKKKHSNIAGWVGVTILGAVAAAAIGIFLDD
>NZ_CP027569.1|WP_054335782.1|1640946_1641402_+|IS200/IS605-family-transposase
MAKKAYDLAHTKWMCKYHIVFTPKYRRKIIYNQYRRDLGSILRQLCNYKGVEIIEGHLMPDHVHMLVSIPPKLSVSSFMGYLKGKSALMMFDRHANLKYKFGNRHFWSEGYYVSTVGLNEKTIRKYIQDQERADIIQDKLSVKEYEDPFKS
>NZ_CP027569.1|WP_027895876.1|1638964_1640737_+|hypothetical-protein
MKQDFKEELNNVLMQSTDAAKEGMDIAASQKENVKMVLDKVMAQKNGSHLFSQDMKVPPVYSAYQQKLYELQHTLRTIYREMDEKFYDYRQDLSSFTITVFGKTTVGKSTLMETLIHGKGDSIGKGAQRTTRDVRRYVWDENHIEFVDVPGICAAKSGGLEDSKKAFDAVRTADLVLFLITDDGPQEEEAAALAKIRSMGKPVICILNVKACGADNDFSFKLRLHSIEKRMTHTNDFSDIKKQFYAYAPKYGDDWSDIPFVYADLHTAWLSEQPEYQIYSQTLYQLSRFETVTDTILREICQHGILYQFRTPIDIICHTLRQVDAEMRGQIQASSQLMVELNRSYSQLQQSRKEYQRYQDNRIQRFLTGVADDLKSRASVFVEDHYEDEKAGARWEQVVRQAAIEKRIKKMLEELTDEEQRRLEKFYYSIPDATGIQVQSLKAKIEGNSVYDTRFWMDAGGLVAIAFVFPGFWAALIAGTIWQGITWLLTDSKADKEKKRKKAMRDALYYWIDGTGKGEGQKNQEIFVQQLARIIDQKKEIIFKPFLKTQDVYDQLIRCIGQLNREQQDMQRGIESILNYLQSEISRRVS
>NZ_CP027569.1|WP_027895877.1|1637304_1638915_+|hypothetical-protein
MDMKWNIVAFNKKYEELKNQVSQAMETVENSLEITLDSSILQNLHVDTTQKVNIVFVGQYSAGKSSIIKMLTHDADIQIGAGITTQSYTPYEWQNLEIVDTPGIQTGLREDHDAITDQAIRKADLLVFVTTPGSMNPTLLHYFNKLAYDMGKADQMILVVNKMNSAGKSDVLYQDLQEILAQPYGTYPMKPLESFRPSFISARLYLDAQEEDDKEFYDEMYQKSGYEQFVKTLDDFARDKGLLGKLRTPVRQLEDVLDQLYQIVVSADQGQSENVEQELLQKVFTIEADYKKLNRFLEDELSAATTLIHQIGNDLANDYTAETTASDWETHVKKAGDKEKKIKEALNTSIQESCQNLNREIKEILQHISKNIVADHLPSTGTESADVARATLEGMQLLKHNSDSVLKGIGEFVYSNKTFFKGRAVQRFVTANSTKFNVALGALTQVVGKIYAEHQLQEAKEKRQAIRKAYQDEAETLSKAVHEGVLKPLKNGVNDKVSELKKKISLNQLKDKETKRMTENIASLTDECQKLMDSLD
>NZ_CP027569.1|WP_027895878.1|1636274_1637270_+|CRISPR-associated-endonuclease-Cas1
MCVVYVMNPGAFISKRNGMVCIWQNHKLAKNIPMATLEGLVLMDKVQISSQLVAELLEKKIPTTWVSSRGRFHGHLESYDAVHVFRQRQQVLEQGTLFALDVSKKVVSAKIHNQITLLRRYNRLQESPHIEEIIQQMGYLQKNVPRTVARDKIMGYEGSAARLYFSAFGELVSEPFTFHGRNKRPPKDAVNAMLSFGYTLLFQEVYTAICTYGMNPYFGFLHTLRNHHPALASDLMEEWRAILIDSMVLSIIRRHEMDIQQFHPDEASHGIYMTKAGRAVFLKAYEKKLRSHNSYQRGTLTFRESMRRQVETYSQALMKEDSSLYEPVQIR
>NZ_CP027569.1|WP_027895879.1|1635995_1636178_+|hypothetical-protein
MNDEDVTQLMCLAGSIAVGIACLVGLDQMMNEEKPAQLKPAQDIFIQPETIEDAKFREMK
>NZ_CP027569.1|WP_027895880.1|1634542_1635637_+|hypothetical-protein
MYYEAIITNLVEKYQHLHDGEIMTAHRLDASVLESVMRKPKASPKSHAEFLHMEYDQVLQILRYFGINSQDLRDLMNQQLKAFSDLFDKRLTYQQDVEQDKQWKRDVQQILGTLREERFQMTRGFYLMALLKFCSDIRYRDLFPTRQIWIQDLSAVEAKNFFRDVDYEINRQEKAFDIADLNDMINDSVQETAVKDDEEETLEDKIQNLEFQLQTTRSTLKFVQRSFDDMVANINARSAEAKEEAVNEFFIQLNSERYGRLLDSAFLVETKMELLRKEKYHFPMQVMTLPILLRNFTNFIKANGFRPIDVVGRTFKASADDLLYIVYEGEPFLGDEKKKVQVTSPGWMKGETVISKPVVKEVVE
>NZ_CP027569.1|WP_027895881.1|1633389_1634526_+|MBL-fold-metallo-hydrolase
MDNLFCALGGGSHIGASCYYLQVDGHSFLLDCGVRSTGSSRLPQLSQLTSEFLDGIWQLDQVILSHAHMDHIGALPYLDAGRDLSILCNPVTQTLTELQLRDFDPLPQQLSSSRQRQLYEAKKERVLSMIHPIGFRTSYETDDYKVTLFPAGHMPGAAMTYIETSKHRILYTGDFSGQKELLCGGYYWPQELPVDVLIIEGTHAYTKDAWQQGYWNIERCLVHQLQLGQTVTLETTNVTKGIELARYLSSALMKSPCWFSGIYLDASMAPIAEAFETAGYQVYTPDIRPLLKPDDLREQAIVIKKGHQGRSYGAVMNGDAFTLHADCQTLTHFINEVQAETTILVHSEPSGMANISNGLDIGNKACIQAVDGETYLFT
>NZ_CP027569.1|WP_027895882.1|1630521_1633350_+|Hsp70-family-protein
MMDNNYFLGIDLGTTNSVLSYINVKDDGEIRANIVDVPRISDTGSQTSDKMLPSVVYYKKDRDGSFQPLVGDFAKAQYGKRQGFIIKSVKSSMGKDSVSDMNVDLPDQKPEDVSARILNQLVQGAKKKLMLDKIPDDVVITVPASFDGDQCKATLDAAEKAGIHAYGSNGKPKNILLYEPKAVLYDIVNSQMNGEIPSSILDVSTPKTVLVYDIGGGTLDVSLHEISQGEKGELLNIKDLAISRYSQIGGDNFDALIATHLCDEFLESTQGMFNVTEQARKEIMATCLKKAESLKIDMNTAYGIKADRGEVLPDDYEGSISEINLYNGCPFERYVTKAELLDFIRPLMGEGLTMDSAKKLQSLNASQVDNIIYPILDVMAKAQAKCGHEVPIDYVVLNGGMSKFFPVVERLERFFGHKLITLNDPDMSVAKGAAIYHYYLHKYNITSHFDEIGDADTVRTTSKDVTEKASVENNESRKAGQLIASSPTRERANVSMGHIQNDTLNLEVRGGNVYPIVPAGTPLPFKSEPLHVLMLPKDCDVIRLPLYYGSGHTTNWPNRKIAERRLRFQQTYPADTPISIQVAVDEFGIISIRTWITDAETELGTVTMVRGQDERDIRNVGRKKAVLPTGTQGMRLNFRAECNELARLVYQRNGVRRQKNGKADSEISRHIRNIGNRMALATNPEDAGADINEALSRYNNMQTYPAILMGVGAKLYKAWPKGEQMEFHRYCRNIVQSIVKNARYCRILDFHMQAINALAAIGAEEDVPLMVELLKGGNKSASPCAAVALAKMKADATPVIRAFLETDETDIQKLDSYAWAIGKLCSREVGTYHNQYLMEDCAKRCFRYLNSPRLRNYNIKSTLLYTIGELCDSRDVIAQPLSISCNRLAKQSLLDFEDEISYTDAEAICSRKLDLAKAMIDGLALAEDDDAQLLALRQRFDD
>NZ_CP027569.1|WP_027895883.1|1630279_1630474_+|hypothetical-protein
MSTSKKIAKNGTKTVVTYGAKKVASRYLGKAAISVAGVTLGAPIIASVVAGFAVEAAFDFLFND
>NZ_CP027569.1|WP_155266569.1|1643709_1644960_+|hypothetical-protein
MEKDILIDSLQGQQAIQFIHDCFSKIGLSWEQCQLTKEEITQCCDHRDEQGHLLLEKEDPHDGFAVCPKCKTMIVMDFDENQLRYDLKDIFKVDLVSHIDKAWHILNKLVLKSEKDLNFYKHNLNVLFEMVQRESLNYLIIMTKLQHCVLNLSHYDAFTSQHIRRLIFPVLKQMEFMETWVYELFVQISNQVQGLESESTEALLQNVADLNTPDELSFIYRCFQKTGTTLNDNLLSEVQGEKCCTHRDEQGHLLLRCSHTKGMVECRRCHDVFSLDFNELTGQYVSRSLFDDPGLGGYDLFQENTLENAERVLKELSAVRTDSVQKCHDVLGELERQQNLVKKERDACCEILDRLDLCILEIPYLNEFTVRQIQHAVYPAKKAIDSRLLWAIELKQQLDNLLQQIKRKKGSHLRVS
>NZ_CP027569.1|WP_027895435.1|1645059_1646019_+|WYL-domain-containing-transcriptional-regulator
MKEDKVSRVLALYSQLLGGRTIQKAAAAQQYGVNERSIQRDIEDIRAFCRNGMALGDGAPCDIVYDYVDKGYRMEGGQAQKLSNSEILALCKILLDSRAFVKTEMEAMLHKVIACCVPASNQAMVTQLVNNEAFHYVEPRHRTSFLDTMWHLGEAIQQHRYVDVSYGRLKDRKIVKRRLKPLALLFSEYYFYLIAFIDDKDIEKIYESARDITPTIYRLDRIKTLNVEKETFHIPYNRRFQEGEFRKRVQFMYGGRLQRVTFTYTGYDIDAILDRLPTAKILSEDNGTYQLEAEVYGKGIEMWLRSQGKYVKDIKIVEL
>NZ_CP027569.1|WP_027895436.1|1646121_1647792_+|AAA-family-ATPase
MKWQMPIGVDNFFDIRSKHYYFVDKTDFIRQLIDGHSAVTLITRPRRFGKTLTLSMLEYFFSIEKEAQSRHLFDGLAIDLAGVDYMAQRGQYPVLFLSLKDLKDLTWPQMLQSLSSWISYWFIDHDYLADSPSVNPDLRRRFLALKQQASGQNEMQLALALLVKMMHQHFGKPVILLIDEYDAPIQQAWKHDFYTECIAFMKQFLGSVLKGNRDLDFAVLTGVLRVAKESIFSDLNNLDVCSVMDAAYREVIGFTPQEVAQMAEDLTMAEALPDLKKWYDGYLFSGAEIYNPWSIINFFRHGEVGDYWVNTSGNGIIREMLRHVTADTEGDLLALLQGCQVTALIREGVIYEDIGHDTDALYTMLLTTGYLTAVSRRRGIGSIRCELVIPNREVQDIYRFEILDKMRGRYSVSRLETMFDELLSGKGQAFSELLGGYIRDLVSVYDTAHKESFYHGFVLGMTALFASDYIIESNRESGYGRFDLAIIPKDVEKAGVIMEFKVADSEADMTDKAKEALQQIEEREYVTEFRRRGIQTVWKYGIAFCGKKVEVVRGQY
>NZ_CP027569.1|WP_027895437.1|1647887_1649417_+|methylmalonyl-CoA-carboxyltransferase
MATVQEKIDQLHEKLAKIELGGGQKRIDSQHKKGKMTARERLAKLFDEGSFTEMGQFIHHRCMNFNMQEKEIPGDGVVTGYGTVRGRLVFAYAEDFTVEGGSLGEMHAHKIAQMQEMALKMGAPVIGINDSGGARIQEGVDALSGFGRIFMNNTAASGVIPQIAVIMGPCAGGAVYSPALMDFVFMVKNTSDMFLTGPAVIKSVTAEEVTAEELGGAMTHSSISGVAHFACENEDDCIEKIKALLDFLPSNNMEEAPVIDSDDDPNREDESLNSVIPDNSSMPYDMLDVIKACVDDGNVFQVLENYALNIITCFARFDGQTVGIIANQPKFLAGCLDINASDKAARFIRFCDSFNIPVVTFVDVPGFLPGTTQEYGGIIRHGAKMLYAYCEATVPKITVVTRKAYGGAYIAMCCRQLGADMVMAWPSAEIAVMGPDGAANIIFKHDPEKEKKKQEYINEFSTPYKAAEHGQIDCVIEPKETRPRIISALAMLYSKREERPSKKHGNMPL
>NZ_CP027569.1|WP_027895439.1|1649950_1650358_+|biotin/lipoyl-binding-protein
MKKFKITVNGKAYEVEVEEMGGTPVAAPAPQASAPAPAPAAPAPAPAAPAATPAPAVGGPIPDGAITVKAPMPGKISALKAEAGKAVKRGDIILVLEAMKMQNDITATADGTLHEIRVNPGDNVKTGDVLAVIVK
>NZ_CP027569.1|WP_027895440.1|1650734_1651811_-|site-specific-integrase
MKKRPDGRYKVSLTIDGKRHYFYGRTIKEAEQRRDKFKNALHAAPNVDYNITLGQWLSIWLRGARSTLAEDTFDSYVFQLRRYVLPTLAKVKLIELQPHMFRDLIASLLSQGYSNRTVQYAIAVVRIGLRQAVNDGIIPTYPLRGVKLPAVTHDKVLALTKDEAGRFLASVPNPKHHNLYWVALYTGLRRSELLGLRINDIDIKNKTLTVNQTVLNVGGSVVISQTTKNKSSHRTISIDDQTLSVIRNQEKIIFKERMAAMSYENNNLLFARPDGRPYDPKYISRRTKAYGRKSGMPEAFSFHTLRHTHATLLVKAGVHFKVIQYRLGHATFAQTMDTYSHITPAMESSVVDKLRDLI
>NZ_CP027569.1|WP_014016479.1|1651917_1652100_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MKRSELLKILKKNGCKLIGHGGNHDLYYSPITGKQFPVWRHNKDIPSGTIKAIFKQAGIQ
>NZ_CP027569.1|WP_027895441.1|1652150_1652603_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MSKYIFPATFQWDEKDKVYYVNFPDVDGCFTDGATLTEAMENADDVLNLMVWNMEQQKQAIPEPTPRDKVKVPENGFVNLVVADTDAYQDVIDRENNPIKYARKKAGLNVKGLADLLGAPYRTVQEWNAGNRMPPKWVQRLIIEKIKANM
>NZ_CP027569.1|WP_027895443.1|1652908_1653946_-|hypothetical-protein
METQTLKIKEIPTNQQYWFFRTEAGSYYPDFYFNDYIAYGWDDFTNIEDLKEALHSDEKKTLLKEEFKKKYPDEKREGLAINQMLLFIDTMKIGDIVLIPSAGGDQLAIGVIKSDVYIYDNKSSEDIDDILDDEERGYKSCPYLKRRNIQWIKTIKKGKLDPHLYKLMCARNTISDASNYDMYIDRDMYPIYLKNGKVYISLRVEQKEGISALDMSNLLSSSLFILHAFEDEKIKSEIDSLEVKMMVESPGVIQFIGYAAATTMLLGSISQFAFGADINFEIAGQTYSIHSNGAAQAYIDYKKEEHRHEETMEQEKNHHELDIQISNLKKSLEQMQVSIPEELKN
>NZ_CP027569.1|WP_036220619.1|1653973_1654186_-|hypothetical-protein
MKKLTLFLTMICVLSSAGTAFAADYLGNPRSMKFHYTTCRTIKHPENFVPIDSRDEALAEGYVPCGVCKP

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Crispr_ID: NZ_CP027569_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_8

1904541-1904645

Orphan

Consensus_repeat	Method
CGGGCCGCCTTTCAGGACGGCCCCTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027569_8

>merge|NZ_CP027569|8|1904541-1904645|CRISPRCasFinder
CGGGCCGCCTTTCAGGACGGCCCCTACGAAAGCGGTCCGTGGGACCGCGGCTAACTGCTGGCCACGAGCCACGAGCCACGGGCCGCCTTTCAGGACGGCCCCTAC

>NZ_CP027569|8|8|1904541-1904645|CRISPRCasFinder
CGGGCCGCCTTTCAGGACGGCCCCTAC	GAAAGCGGTCCGTGGGACCGCGGCTAACTGCTGGCCACGAGCCACGAGCCA
CGGGCCGCCTTTCAGGACGGCCCCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_027895748.1\|1895295_1896150_+\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|225543
NZ_CP027569.1\|WP_027895749.1\|1896656_1897211_+\|membrane-protein	unknown	unknown	gnl\|CDD\|227064
NZ_CP027569.1\|WP_027895762.1\|1915467_1917090_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|379060
NZ_CP027569.1\|WP_027895759.1\|1909294_1909981_+\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|319809
NZ_CP027569.1\|WP_027895756.1\|1906021_1907233_-\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|377535
NZ_CP027569.1\|WP_027895754.1\|1900498_1902085_-\|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl\|CDD\|376517
NZ_CP027569.1\|WP_036220785.1\|1917421_1919398_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP027569.1\|WP_080712323.1\|1898174_1898753_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|188615
NZ_CP027569.1\|WP_027895760.1\|1910006_1910396_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895752.1\|1898827_1899301_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341362
NZ_CP027569.1\|WP_036220782.1\|1899538_1900354_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223331
NZ_CP027569.1\|WP_027895761.1\|1911803_1915319_+\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_CP027569.1\|WP_027895747.1\|1893911_1894880_+\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_CP027569.1\|WP_027895750.1\|1897224_1898046_+\|pyridoxamine-kinase	unknown	unknown	gnl\|CDD\|180840
NZ_CP027569.1\|WP_027895758.1\|1908061_1909258_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP027569.1\|WP_027895755.1\|1902369_1904319_+\|molecular-chaperone-HtpG	unknown	unknown	gnl\|CDD\|235366
NZ_CP027569.1\|WP_014016979.1\|1919413_1921618_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP027569.1\|WP_014017001.1\|1894910_1895294_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|376779
NZ_CP027569.1\|WP_014016983.1\|1910401_1911313_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176129
NZ_CP027569.1\|WP_027895757.1\|1907493_1908030_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_027895748.1\|1895295_1896150_+\|RNA-binding-protein	gnl\|CDD\|225543	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only].	7.07292e-76
NZ_CP027569.1\|WP_027895749.1\|1896656_1897211_+\|membrane-protein	gnl\|CDD\|227064	COG4720, COG4720, Predicted membrane protein [Function unknown].	2.63237e-16
NZ_CP027569.1\|WP_027895762.1\|1915467_1917090_+\|EamA-family-transporter	gnl\|CDD\|379060	pfam13189, Cytidylate_kin2, Cytidylate kinase-like family. This family includes enzymes related to cytidylate kinase.	7.98247e-46
NZ_CP027569.1\|WP_027895759.1\|1909294_1909981_+\|HAD-hydrolase-like-protein	gnl\|CDD\|319809	cd07506, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.86298e-22
NZ_CP027569.1\|WP_027895756.1\|1906021_1907233_-\|nucleotidyltransferase-family-protein	gnl\|CDD\|377535	pfam05636, HIGH_NTase1, HIGH Nucleotidyl Transferase. This family consists of HIGH Nucleotidyl Transferases.	2.83442e-123
NZ_CP027569.1\|WP_027895754.1\|1900498_1902085_-\|phosphoenolpyruvate-carboxykinase-(ATP)	gnl\|CDD\|376517	pfam01293, PEPCK_ATP, Phosphoenolpyruvate carboxykinase.	0
NZ_CP027569.1\|WP_036220785.1\|1917421_1919398_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP027569.1\|WP_080712323.1\|1898174_1898753_+\|radical-SAM-protein	gnl\|CDD\|188615	TIGR04100, Radical_SAM_domain_protein, radical SAM enzyme, TIGR04100 family. Members of this protein family are radical SAM enzymes that appear paired with members of TIGR04002, a family of small (~170 residue), mostly hydrophobic protein. This family of radical SAM enzymes belongs to a larger family TIGR04038, in which some members show regularly in contexts with TatD.	3.1434e-85
NZ_CP027569.1\|WP_027895752.1\|1898827_1899301_-\|CBS-domain-containing-protein	gnl\|CDD\|341362	cd04586, CBS_pair_BON_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.68754e-45
NZ_CP027569.1\|WP_036220782.1\|1899538_1900354_+\|hypothetical-protein	gnl\|CDD\|223331	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism].	1.2491e-16
NZ_CP027569.1\|WP_027895761.1\|1911803_1915319_+\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_CP027569.1\|WP_027895747.1\|1893911_1894880_+\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	4.44174e-28
NZ_CP027569.1\|WP_027895750.1\|1897224_1898046_+\|pyridoxamine-kinase	gnl\|CDD\|180840	PRK07105, PRK07105, pyridoxamine kinase; Validated.	4.19814e-100
NZ_CP027569.1\|WP_027895758.1\|1908061_1909258_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP027569.1\|WP_027895755.1\|1902369_1904319_+\|molecular-chaperone-HtpG	gnl\|CDD\|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_CP027569.1\|WP_014016979.1\|1919413_1921618_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP027569.1\|WP_014017001.1\|1894910_1895294_+\|ribosome-silencing-factor	gnl\|CDD\|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	3.39368e-48
NZ_CP027569.1\|WP_014016983.1\|1910401_1911313_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176129	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold. This CD includes the substrate binding domain of CidR which positively up-regulates the expression of cidABC operon in the presence of acetic acid produced by the metabolism of excess glucose. The CidR affects the control of murein hydrolase activity by enhancing cidABC expression in the presence of acetic acid. Thus, up-regulation of cidABC expression results in increased murein hydrolase activity. This substrate binding domain has significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.63218e-72

>NZ_CP027569.1|WP_027895755.1|1902369_1904319_+|molecular-chaperone-HtpG
MAKETHEFQAETKQLLDLMVHSIYTNHEIFLRELISNASDAIDKLHYQSLTNGDLLEGDTAFEIHLTPDADAHTLTISDNGLGMNKQDLMENLGTIAQSGTKAFLEKLKESQDADSTDKDLIGQFGVGFYSAFMVADKVTVVTRKAGEEQAYKWESTGDGEYSLEECQKPKHGTTIILSLGKDFYGDDSEENYTDKMTLQSLVKKYSDYIRYPITMDFTTKEKPKDADGKVIEDAPEEEHTETRTLNSMQPLWTRNKSDIKPEEYKEFFQHQFYEWEEPMEIFHNRVEGAVDYTALLFIPGKAPFNLYYADYEPGIQLYSRHVFIMDKCKDLLPDYLRFVKGLVDSPDLSLNISRELLQKSRELSLIGRNLEKTILKTLKRNLEKDREKYETFWAEYGKSLKIGVYSGMMTGENNVEKLKDLLLFMSSKDGKLCTIKEYVDRMKDGQQKIYYATGKDKEAIEGLPQMEMLRDRGIEVLYMTDPVDEFAVEAIGEYDGHRFHSISRGDLDLEDDAFKEEKKKNEELAKDNEGLLKDMKDFLGDKVADVRLSNRLKSGAVCLVADAAGPSLAMEQAFAAANNPMLKARRILEINPQHELFGKLTAVHDQGKDSQSFKDYCNLLYDQALLLEGIMPDDPVAFANKVASLMAK
>NZ_CP027569.1|WP_027895754.1|1900498_1902085_-|phosphoenolpyruvate-carboxykinase-(ATP)
MQQTYGLERMGLINPQVVYRNMSPAWLTEQALLNQEGVLSDTGALVVRTGKYTGRAPDDKFIVDTPSIHDYIAWNNINRPISKEKFNALKSKMLAYFQNRPIYLFDGFAGADEQCRKKFRVVNELASECLFIRNLLIRPTAEELAQYGEPDFTILVAPGFQCNPQVDGTHSQAAILVDYESRTVLIAGTRYAGEIKKSVFSVMNYFLPNEGVLPMHCSANMDPVTKETAIFFGLSGTGKTTLSADPNRKLIGDDEHGWSSRGIFNFEGGCYAKCINLNPEKEPYIYNAIKAGTLVENVVLDEDTRHPNYFDSKITENTRAGYPIDYIPNAAQPGKGGIPTVIIFLTADSFGVLPPISRLSKEAAMYHFVTGFTSKVAGTEQGITEPIPTFSTLFGEPFMPLAPDIYAGMLGERIEKYNTKVYLVNTGWTGGPYGIGSRMDLKYTRAMITAALNGYLDDVPYRHDLRFNVDIPQTCPGVPNQILNPRATWDNKKSYDIMAKKVAAMFYENFKTKYPDMPEEIIEAGPRV
>NZ_CP027569.1|WP_036220782.1|1899538_1900354_+|hypothetical-protein
MTIDYLVADPSGNTTILVLTPVAKAQHSSLAAQLLALPGIEAEQVGYVSREAGKPLRVDMMGGEFCGNASRSAAAWALACDGGEQGVYDVSCSGCDAVLPAKVARKGEGTYEAFIEMPYPEDVSGILIAVDDFPARFFRVDLPGITHFVHFVPSLEGLDKEKYWTILQDYVDGEDLPAYGLVLCDTKKGEMIPAVYVRDTDTLYWENSCGSGSAAVAAALACTTHKNVACYMKQPGGTLAIAAKVSEKGDLQQIFIGGPVTLGEVETVTIS
>NZ_CP027569.1|WP_027895752.1|1898827_1899301_-|CBS-domain-containing-protein
MSKTAADIMEKNVITAQKDTSIFNLVDMFVENNVNAIPIVQDDKEIIGIVTDADLLYKEVKPCVPQYVNLLGANIYYGNLKEYQQGFKKLFACTAEQLMTKKVIMAGPDATIEDLASVMVAEHLKAIPIVKDKKLLGMVERKNILKQLYNEYGDNGQ
>NZ_CP027569.1|WP_080712323.1|1898174_1898753_+|radical-SAM-protein
MYVNLTNRCTCSCTFCLRSMKKMAENETLWLKREPTVDEVKKALDGAPWDHINEVVFCGFGEPTERLDDLTALLKYVKDAHPVMKTRVNTNGLSDLAYGRDTAPDFGGGILDTISISMNASNKERYLELTRSKFGIQSYDAMLKFAVDCKQYVPNVVLTVVDHVEDSEEIKKCRAICDKLGLHLRVRVYEDK
>NZ_CP027569.1|WP_027895750.1|1897224_1898046_+|pyridoxamine-kinase
MHQKKLALVNDVTGYGRCSIAVALPIVSVLKVQGCILPTAILSVHTGFHDYYLDDYTDHMTPYIESWKKNGLTFDGISTGFLGSARQIDIVLDFLHDFKGPQTLAFIDPVMGDDGQLYPSYTQEMCDEMRRLLAYADVVTPNVTEACELLSLPYRSDRDLGEADLLAMAQALAEKGPQGVILTGIHDGPYIGNFIYDHGRTSWVKAKKIGSDRSGTGDVFAAIVSASVVRGESLEQAVQKASDFICRVMAYTETLDLPHNAGLAFEEYLTTLR
>NZ_CP027569.1|WP_027895749.1|1896656_1897211_+|membrane-protein
MSSYSMEHKQQAVSAGSLCYAAVLTALVFVLTFVPKIPIPLGYAHLGDAIIFASVLFSTRRQAALAASVGSALSDFIGGFPLWIIPTLIIKYVMVEAVFYTVRPDKREWKLTSPRVFFGFFLSAAWMVLSYTVSGSLLYGSWAVGIPMVPGLIGEGVVNMIAAYALAACLVKARFRGYGYSLKR
>NZ_CP027569.1|WP_027895748.1|1895295_1896150_+|RNA-binding-protein
MTTLQENSIATLEVLRQSDMGVFLNGGTGNTNDDILLHKNQQTGDVNVGDKVTVFLYHDPSGRLTASMRLPKIKVGQIGYAPVINTTRFGAFVDVGTERGIFMPFAEMKGRPKEGEYVWVKLYEDKSHRLAVSMEVEDEMRRASRAATDAKIGDWVEGAVYNMTDQGAYLMTRERWIAFLHRSEFNGPILIGQMIKGRITYLREDGRINISLRQTKENAINPDAERILDFLKQRKGKMPYGDKTAPAVIKAKFGLSKAAFKRALGHLMKEKKIHQDQGWTYLDM
>NZ_CP027569.1|WP_014017001.1|1894910_1895294_+|ribosome-silencing-factor
MPITMKAAKAEQPKELKSYEIACKAADDKKAWDIVTLDMSDSSLMADYFVICSARNNRQSQSIADNIEEQMEKNGYDVRHVEGYREGKWILIDAGEVIAHVFVEQDRQYYDLENLWCDAPRIAYEGE
>NZ_CP027569.1|WP_027895747.1|1893911_1894880_+|LCP-family-protein
MTQEKRRKILYRILTVVAAVAVFLAGRSLYLHYQSIKEAPIQQDAPDTSQTQSDSSVFAQTSPDKPLYVLLLGTDGGHPQQANFVGVAAINKAKKHIDIIMLPDDTKIEGRKEKGIQELQDVYSEGGMSLVRAVVEDVFHIPIPYYATFTVDSFSKMVDMSGGVPIYVEKNMYHGDEETGKTDINLFQGYQTLTGKEAAGYMRYVDGDGYLSRTQRQERFIKNFYEDRQDCFGVTNAFFLYRAWHDVDSNISAKDMAQLAFDFRGVTADNIDFYILPGEMAMSGKNGDTKYYWTYDPVEVQKVIGRTNNAISTAPEPDDTKK
>NZ_CP027569.1|WP_027895756.1|1906021_1907233_-|nucleotidyltransferase-family-protein
MEAVAIIAEFNPFHTGHAYLIRQVRRLSGTDAAIVVIMSGAFVQRGEPAFFDKWHRAAWAIEGGADAVIELPAVYALSSASGFALGGVTLAARLGCQSLACGVEAGTAEDFLSLARRADTLEISPETAKKGSAGQARTDALMAAAPDEARLLEQPNALLAFEYARALLKQERPLSFLPLPRQGRHGDTGLGATFASASALRQAMTDHPGDEKPYISYIVERVRPSLQDQLTLGAFTDYRRYGDFVAGQNRLLTPDQLRRLPAFTEGLENRWYRAFAEAGDYDQALKLIKTRRYAYSRLCRMGAYTLLQPSRRLMDQSYETGPQYARLLALNGRGAAFLKGARDRLAVITKIRQDLSKLTPLGREQLALDLRASDVQSFCFSKENQRKGHQDYYHSPIFIGIQK
>NZ_CP027569.1|WP_027895757.1|1907493_1908030_+|hypothetical-protein
MKGLKLLAVAAMTAAVVLLSGCGNMTMLEEYSFGYVQLKAGNSEVYVMTPFDLAHVSRQNGEGMMYINNDKHINVVAVSETAGETTPAAMAKEYVAMLKQTPDVSDLQTKVTDAEESGRKTTVVNASYTEPLNGQPAKLTVRSLFFEDNGQIWHVMYMYKDGDALAKEVVDHVFGQLK
>NZ_CP027569.1|WP_027895758.1|1908061_1909258_+|acetate-kinase
MIVLVVNCGSSSLKYQLVNMDNEEVMAKGLVEKIGLPDSQLTHKWNGQKKEIKQSIPDHKVAVKLVLDILTDAECGVIKSMDAIDAVGHRVVHGGEEFAASTLITDEVMKALEKCSAMAPLHNPPNIIGINACKAIMPGVPQVGVFDTAFHQTMPAKAFMYGLPYELYKEDHIRRYGFHGTSHRYVAGEVAKVMGVPVEKLRIINCHLGNGSSLAAIKYGKCVDTTMGFTPLAGVLMGTRCGDIDPAIVLNVMDNHNLSTKEMDTLMNKKSGVLGISGVSSDFRDLGQAAAEGNERAQLALDMFHYQVRKEIGAFAAAMGGVDVITFTAGVGENGIEDRAAIAEGLEYLGAKLDPQRNDVRGKDALISTDDSTVKMYVIPTNEEIMIARDTKEIVSKQ
>NZ_CP027569.1|WP_027895759.1|1909294_1909981_+|HAD-hydrolase-like-protein
MKLLYWDIDGTLLNTGRAGLYAIEEVFHDLKGADVPVPKIAAGGRTDNFICQQLLYKATGIMPTDEEVHAFCRGYEKKLLKWLKRKADEGVVLPQVEANLAFFQQRKEYKQLLLTGNSATGARMKMDVFGLSQYFDFPHSGFAFNYYYRDDLARNALAIAKKTWGDAIEMAYVIGDTPYDIQCGKAIGARTISVATGRYSYEELAQCAPWKILHSLPEPEAFLKIIEN
>NZ_CP027569.1|WP_027895760.1|1910006_1910396_-|hypothetical-protein
MDRHKSPAFLAGLRQKEQQGCAALSHLRRRFCQAWRGLPKAQKCVVLVALLEFLWIAALQFQVYELADTISMQRVRIAQLEKQAKKQNNMLYSASQTLDDIEKKWHRLNFRVLENTWRIEEPEKDPDSL
>NZ_CP027569.1|WP_014016983.1|1910401_1911313_-|LysR-family-transcriptional-regulator
MDFHHLKYFVEVADKKSFSKAARTLHISQSAISRTIKALEEELGVVLFMRNAKAVELTDAGTIFLSHAKRVVFMFEHLKTDFENEFKLEQGTVLIGLPPITGAPIFANLLGAFKQEYPQIELDLYEHGSKKVEISVQEGLIDLGIVCTQPKEKDFESFFLTQDPMNVIIHRDNILSKEKTIPLKKLANESLVLYRDDFNLHDEIIQHCKKIGFQPKIVFETSQRDLMIQTVVANLGVALLPSRLCPTKETNPRVSESVVVRPLVEPEIMHVLYVIWKRGHYLSHAAQLWLDFVRNKARVISNL
>NZ_CP027569.1|WP_027895761.1|1911803_1915319_+|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MSKFKTMDGNEAAAWVSYAFTEVAAIYPITPSSPMAEHVDDWAAAGMKNIFGHKVNVVEMQSEAGAAGAFHGSLQAGALTTTYTASQGFLLMIPNMYKVAGELLPGVFHVAARALANHALNIFGDHQDVMSARATGCCLLAESNVQEVMDLGGVAHLAAIKGSLPFINFFDGFRTSHEIQKVEVMDFENFKKLVDWDAIEAFRKRALNPDHPEIRGTAENPDVYFQHTEASNKFYDAMPDIVAGYMDKISEITGRTYKPFNYYGAPDAEYVVVSMGSLSDVAKQTVEYLQSQGEKVGAINVHLYRPFSNKYLLNVLPKTVKKIAVIDRTKEPGSLGEPLYLDIVGFVTEENLNIDVIGGRTGMGSKDVLPEDFLAVFKELKKEHPLNGFTLAINDDVTNLSLPREPKMPLDTTGLTSCKFWGFGSDGTVGANKSAIKIIGDHTDMYAQAYFAYDSKKSGGVTISHLRFGTRPIDMPYLIDAADYIACHRQSYIKRFDVLRGIKDGGTFMLNCTWTDEELEKELPARIKRSIAKHHVKFYTLNGDAIGQKLGLGTRINMVMQAAFFALAKIIPIDDAVKYLKDSIVKSYGKKGQKVVDMNNGAVDAGIKEFHEVNYPASWADAKDEVVEGRPATKYFTEVAKPMLEQVGDDLPVSAFAGREDGTMPSGTAKFEKAGPALHVPSWDAEKCIGCMQCSFVCPHATIRPVLTTDEELKAAPAGFQTAAKAKSGKQYHVSIIVDQLDCLECGSCVNVCPVQALTMVPNTDAERQKMDLWYYGTEQVAPKANPQNKKTVIGSQFETPLLEFSGACAGCGETPYVKLITQLFGDRMMIANATGCSSIWGASAPVSPYTMNAAGHGPAWANSLFEDAAEFGLGMFLGVDKVRKDLAENLDAAKAVASPELQAALSDWAANMNEGEGSRERADKLTALLEKEAAGKPVLEDFLAKKQFFVKRSQWIIGGDGWSYDIGYGGVDHVLASDHDVNVLVLDTEVYSNTGGQSSKATPTAAIAQFAAAGKRTKKKDLGMMAISYGYVYVAQVAMGADKNQLMKAMTEAEAYHGPSLVICYAPCINHGIRKGMGKSQLEEKLAVECGYWDLFRYNPDLKAQGKNPFSLDSKEPDYSKFQEFLQGEVRYASLKKGFPEEADALYAKTEADAKARRESYVRLQKGFED
>NZ_CP027569.1|WP_027895762.1|1915467_1917090_+|EamA-family-transporter
MSSKLGTLCIVLTAIAFGTMEISLKIAGTAFTPFQLTFLRFLVGGLLLMPLAIRDLKKRSIHLDRSDWGYLAVLGLINICFSMILFQIGVNMANAGLAAIVFSSNPIFVMIFSYFIIHEAFTRKKAITLVLSLIGLVIVANPMAIIRSGNIGLLVSLAAAVSFALYTTLGKLRIEKLGGNVENAFSFLIGCVFLLFILLFHGDPIVAGIDSHTVWPLIYCSLVVTGFGYLCFMKAIELTGPSNASFAFFIKPIIALILSAIILSEPITVNAVVGLALILLGCTMAGPIEHLLFRHHAIGEIEGRENHPAWIKEDTESPLVITISREYGSGGRNIGKLVARQLGIPYYDTEILNLTRKEHPQTFAAWCKDRKRLLGPLLTKVYDDYIHYASGYESKQQEMFRDEAEVIQGLTAGKSCVIVGRLANYILRKRPNTFNVFISSDPDWAIQRIMLREHVDADKARKIRNHVNHERRDHCMYCTDSYWGYGANYDLSLKSSDYGVVKTADLILQAAQHRLTISKEDINPAADHNAISTPAAAAES
>NZ_CP027569.1|WP_036220785.1|1917421_1919398_+|single-stranded-DNA-specific-exonuclease-RecJ
MEKRWQFGRPDSGLIQALTEQLHISPVLAQVLANRGIADAGEASHFLHDTLADMADPFLMKGMDAAVQRLEQAITENQRIVIYGDYDVDGITSTSLVYSVLRDLGAAPQFYIPERQSEGYGLNEGALAQLSRQADLLITVDCGISSYDLVRKFSPVLDMIITDHHEPPDLIPPALAVLNPKQAGCPYPFKELAGAGVAYVLCRALWQHHCQEDLPGYADLAALGTIADLVPLTGENRILVRYGLAAMKEGKRTGLKALLDASNLSGRDITAGRIAFTAAPRLNAAGRISHATKGVELLLETDAAKAAADAAELSHLNTERQDIEHTIAQEAIAQIEGQGRGRDGVLIAYHQGWHVGVIGIAASRLVETYYRPSLVITVRDGIGKGSCRSISGFNMYEALQYAQDLLIQFGGHTMAAGFSVKAENIEALRQRLLDYAAAHMTAADYIPLVHIDKELEPAEVTLDLIAELARLEPYGMGNSRPVFSLTGAVVEEIRPIGREKQHVRLVARGADRTRLSGVAWSQAGLCDAIVEGDVIDVAFQLERNDFNGLSSPQLVIQDVHLPHRHIVLNRAVMVDIYMALKKCIPDWGMPVWQVRRRLAAAQGDCYDVHTIYAAIVVLREIGVLKVRHDDDGPAYYFPILAGKMDLHASPTYELYCKE
>NZ_CP027569.1|WP_014016979.1|1919413_1921618_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MEFKDKDVEFKHLIDTIHSYLPKAKCDDVTKAYQLAEEAHKDQRRVSGEPYILHPLAVAQILADMKIDTTTITASLLHDVVEDTSYTLDDLKKMFGKEVAFLVDGVTKLSRLNYRTKEDQQLNSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRYMRSDKQKRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEIVNEAIDVLKKALDEAHIHCEINGRPKHFYSIYKKMKKDNRDLSQVYDLFAIRVIVDDVKDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQPVEIQIRTWEMHRIAEYGVAAHWRYKEGNQTANKDAFDEKMGWLRNLLEWQDTSNPKEFVNALKLDAFSDEVFVFSPRGDVIDLPQGAIPIDFAYRIHTDVGHRCVGAKINGKIVPLDYKLKNGDIVEIITSKVGKPSLDWLNIVGSSESRSKIRSWFKKENREENIAKGLDALERECKRLGHDWKALNVGGRLGRVAKQMNAGSEDDLVAAVGYGGFAVNTVLIKLLELHKKDLQKQEEKTNSLAALEKLKTKKPVKHNGTGILVKGEPGLLVRLAKCCSPVPGDPIIGFITRGRGVSVHRADCPNVTHGQNDVDRLIDVEWDYDGNERFEVNMEIVAYDRTGIMAEIMATLAEMKISILSVNAKTSDTKNVTIHMGISIKDLAQFEFVATKIRRLKDVYAVERYTGGSQA

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Crispr_ID: NZ_CP027569_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_9

2001839-2002621

TypeI

I-C

Consensus_repeat	Method
GTCGCACCCTTCACGGGTGCGTGGATTGAA	PILER-CR
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CRT

11 spacers

cas14j,cas7,cas8c,cas5,cas3,cas14k

The CRISPR arrays of NZ_CP027569_9

>merge|NZ_CP027569|9|2001839-2002621|PILER-CR,CRISPRCasFinder,CRT
GTCGCACCCTTCACGGGTGCGTGGATTGAAATGTCTGGTGGGCCTTTGACTGGGAACACGACCCGGAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATAACCAAATGGAAATCTGTACGAACCTGCGCCTGGGAGTCGCACCCTTCACGGGTGCGTGGATTGAAATACGATGCCCGTGCGGGGCCGGGACGACATGTGTATGAGTCGCACCCTTCACGGGTGCGTGGATTGAAATTCGGGAAATACTGGGAAAAGTTGCATTATTTCATCGTCGCACCCTTCACGGGTGCGTGGATTGAAATAATATTGGCCACGTATTGTTTAAATTCGGTGTATCGAGAGTCGCACCCTTCACGGGTGCGTGGATTGAAATTGCCATCCGGCTCTAACTGGCCGCATAACACGATGCGAGTCGCACCCTTCACGGGTGCGTGGATTGAAATAAATTAGCCAATAGCCAAGCCCCCTTTACTGATTGGAGTCGCACCCTTCACGGGTGCGTGGATTGAAATGGTCGTATCTTGTGACTATCTAAGGGTGCTATTTGTCGCACCCTTCACGGGTGCGTGGATTGAAATCCATGGCATCCGCTTCATTGCATCCAAACAGCTCAGGTCGCACCCTTCACGGGTGCGTGGATTGAAATGTCCATAAATAAGCCCCCCTTAAAACTGACTTGATGTCGCACCCTTCACGGGTGCGTGGATTGAAATCAGACCAAACGTTGCACAAGTACCACATGTCGGCAGGTCGCACCCTTCACGGGTGCGTGGATTGAACG

>NZ_CP027569|9|7|2001839-2002619|PILER-CR
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATGTCTGGTGGGCCTTTGACTGGGAACACGACCCGGAA
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATAACCAAATGGAAATCTGTACGAACCTGCGCCTGGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATACGATGCCCGTGCGGGGCCGGGACGACATGTGTATGA
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATTCGGGAAATACTGGGAAAAGTTGCATTATTTCATC
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATAATATTGGCCACGTATTGTTTAAATTCGGTGTATCGAGA
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATTGCCATCCGGCTCTAACTGGCCGCATAACACGATGCGA
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATAAATTAGCCAATAGCCAAGCCCCCTTTACTGATTGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATGGTCGTATCTTGTGACTATCTAAGGGTGCTATTT
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATCCATGGCATCCGCTTCATTGCATCCAAACAGCTCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATGTCCATAAATAAGCCCCCCTTAAAACTGACTTGAT
GTCGCACCCTTCACGGGTGCGTGGATTGAA	ATCAGACCAAACGTTGCACAAGTACCACATGTCGGCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAA

>NZ_CP027569|9|9|2001839-2002621|CRISPRCasFinder
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTCTGGTGGGCCTTTGACTGGGAACACGACCCGGAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AACCAAATGGAAATCTGTACGAACCTGCGCCTGGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACGATGCCCGTGCGGGGCCGGGACGACATGTGTATGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TCGGGAAATACTGGGAAAAGTTGCATTATTTCATC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATATTGGCCACGTATTGTTTAAATTCGGTGTATCGAGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGCCATCCGGCTCTAACTGGCCGCATAACACGATGCGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AAATTAGCCAATAGCCAAGCCCCCTTTACTGATTGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGTCGTATCTTGTGACTATCTAAGGGTGCTATTT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCATGGCATCCGCTTCATTGCATCCAAACAGCTCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTCCATAAATAAGCCCCCCTTAAAACTGACTTGAT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAGACCAAACGTTGCACAAGTACCACATGTCGGCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAACG

>NZ_CP027569|9|6|2001839-2002621|CRT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTCTGGTGGGCCTTTGACTGGGAACACGACCCGGAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AACCAAATGGAAATCTGTACGAACCTGCGCCTGGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACGATGCCCGTGCGGGGCCGGGACGACATGTGTATGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TCGGGAAATACTGGGAAAAGTTGCATTATTTCATC
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATATTGGCCACGTATTGTTTAAATTCGGTGTATCGAGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGCCATCCGGCTCTAACTGGCCGCATAACACGATGCGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AAATTAGCCAATAGCCAAGCCCCCTTTACTGATTGGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GGTCGTATCTTGTGACTATCTAAGGGTGCTATTT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CCATGGCATCCGCTTCATTGCATCCAAACAGCTCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	GTCCATAAATAAGCCCCCCTTAAAACTGACTTGAT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CAGACCAAACGTTGCACAAGTACCACATGTCGGCAG
GTCGCACCCTTCACGGGTGCGTGGATTGAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_022498155.1\|1990317_1990821_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376892
NZ_CP027569.1\|WP_027895261.1\|1993747_1994551_+\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|276807
NZ_CP027569.1\|WP_014016939.1\|1989401_1989587_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895263.1\|1997530_1999345_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP027569.1\|WP_027895685.1\|2010785_2011658_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP027569.1\|WP_014016925.1\|2008033_2008561_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|234753
NZ_CP027569.1\|WP_014016938.1\|1989684_1990287_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP027569.1\|WP_014016928.1\|2004749_2005532_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|238847
NZ_CP027569.1\|WP_014016936.1\|1990977_1993566_-\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|274529
NZ_CP027569.1\|WP_027895689.1\|2005545_2006547_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP027569.1\|WP_027895684.1\|2012830_2013286_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_CP027569.1\|WP_036204050.1\|2002814_2004071_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14k	-	gnl\|CDD\|366606
NZ_CP027569.1\|WP_014016933.1\|1996880_1997534_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP027569.1\|WP_106669715.1\|2000376_2001492_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP027569.1\|WP_027895264.1\|1999346_2000240_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP027569.1\|WP_027895686.1\|2009689_2010805_+\|UDP-galactopyranose-mutase	unknown	unknown	gnl\|CDD\|223636
NZ_CP027569.1\|WP_027895687.1\|2008575_2009556_+\|P1-family-peptidase	unknown	unknown	gnl\|CDD\|239070
NZ_CP027569.1\|WP_014016920.1\|2013352_2014015_+\|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|225415
NZ_CP027569.1\|WP_027895688.1\|2006719_2008006_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|379646
NZ_CP027569.1\|WP_027895262.1\|1994670_1996863_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_022498155.1\|1990317_1990821_-\|hypothetical-protein	gnl\|CDD\|376892	pfam02675, AdoMet_dc, S-adenosylmethionine decarboxylase. This family contains several S-adenosylmethionine decarboxylase proteins from bacterial and archaebacterial species. S-adenosylmethionine decarboxylase (AdoMetDC), a key enzyme in the biosynthesis of spermidine and spermine, is first synthesized as a proenzyme, which is cleaved post translationally to form alpha and beta subunits. The alpha subunit contains a covalently bound pyruvoyl group derived from serine that is essential for activity.	6.04553e-20
NZ_CP027569.1\|WP_027895261.1\|1993747_1994551_+\|sel1-repeat-family-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	1.55396e-36
NZ_CP027569.1\|WP_014016936.1\|1990977_1993566_-\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_CP027569.1\|WP_027895263.1\|1997530_1999345_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP027569.1\|WP_027895685.1\|2010785_2011658_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	1.11844e-165
NZ_CP027569.1\|WP_014016925.1\|2008033_2008561_+\|dCTP-deaminase	gnl\|CDD\|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	3.1033e-65
NZ_CP027569.1\|WP_014016938.1\|1989684_1990287_-\|HD-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	2.43279e-42
NZ_CP027569.1\|WP_014016928.1\|2004749_2005532_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|238847	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.	4.37077e-70
NZ_CP027569.1\|WP_027895689.1\|2005545_2006547_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	4.1043e-103
NZ_CP027569.1\|WP_027895684.1\|2012830_2013286_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	5.98317e-62
NZ_CP027569.1\|WP_036204050.1\|2002814_2004071_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|366606	pfam01385, OrfB_IS605, Probable transposase. This family includes IS891, IS1136 and IS1341. DUF1225, pfam06774, has now been merged into this family.	5.17885e-26
NZ_CP027569.1\|WP_014016933.1\|1996880_1997534_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	7.23913e-97
NZ_CP027569.1\|WP_106669715.1\|2000376_2001492_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.80001e-58
NZ_CP027569.1\|WP_027895264.1\|1999346_2000240_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	3.73519e-145
NZ_CP027569.1\|WP_027895686.1\|2009689_2010805_+\|UDP-galactopyranose-mutase	gnl\|CDD\|223636	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane].	1.31647e-167
NZ_CP027569.1\|WP_027895687.1\|2008575_2009556_+\|P1-family-peptidase	gnl\|CDD\|239070	cd02252, nylC_like, nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC. EIII is an amide hydrolase that catalyzes the degradation of highly-polymerized 6-aminohexanoate oligomers. Together with other nylon degradation enzymes, such as 6-aminohexanoate cyclic dimer hydrolase (EI) and 6-aminohexanoate dimer hydrolase (EII), EIII plays a role in the detoxification and biological removal of the synthetic by-products of nylon manufacture. EIII shows sequence similarity to L-aminopeptidase D-amidase/D-esterase (DmpA), an aminopeptidase that releases N-terminal D and L amino acids from peptide substrates. Like DmpA, EIII undergoes autocatalytic cleavage in front of a nucleophile to form a heterodimer. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucleophilic attack of the side chain of an N-terminal serine, threonine, or cysteine.	8.30592e-89
NZ_CP027569.1\|WP_014016920.1\|2013352_2014015_+\|trimeric-intracellular-cation-channel-family-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	8.24137e-52
NZ_CP027569.1\|WP_027895688.1\|2006719_2008006_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|379646	pfam14559, TPR_19, Tetratricopeptide repeat.	0.00536444
NZ_CP027569.1\|WP_027895262.1\|1994670_1996863_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.10737e-56

>NZ_CP027569.1|WP_106669715.1|2000376_2001492_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MIVNKAYRYRIYPTTAQKIMFAKTFGCVRFIYNKMLSDRIDYYKETGQKLNNTPAQYKEDFPWLKEVDSLALANAQLNLNKAYSHFWNDSQHFGKPRFKSKKNSRASYSTNNQKGSVRIEGHKVKLPKVGWVKLCQHRPLPENSIIKTVTISKTPSGKYYISMLVEYENQVLPVIPKTFLGLDFAMHGLYVASDEEDAKYPDFLRKAEKRLAKAQQKLSKKQKGSHNREKQRLRVAILHEKVANQRRDFLHKKSRYLADRYDAIGIEDISVKAMAKRKKGGKFSFGKSVADNGWNLFTNMLEYKLAWQGKQLIKIDKWYPSSQLCHVCGYRTSETKDLSVREWNCPKCGSHHDRDKNAAINIREEARRISA
>NZ_CP027569.1|WP_027895264.1|1999346_2000240_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSEPIKNRYEFTILFDVENGNPNGDPDAGNMPRVDPETGYGLVTDVCLKRKIRNCIETICEDQPGYRIYVKEGVPLQRSDKEALTYVGIDEKTDIKKMKKDDPELDRKICDFMCQNFFDIRTFGAVMTTFVKSALNCGQVRGPVQLGFARSIDPIVPQEVTITRVAITTEKDAENKNTEIGRKYIIPYALYRVDGYVSANLARKVTGFSEDDLQYLWKAIINMFEYDHSAARGNMAVRELIVFKHDSELGNAPAYKLFDTVHVQKKEGVVAPRNYTDYDVTVDESKIPEHVTCTRMM
>NZ_CP027569.1|WP_027895263.1|1997530_1999345_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQSLVAYYETLARQGAIAKPGWGDYKISYAVNLNQQGEVIGILSLEKEVMRGKKKVSVPTIHMLPEGVKKTVGIRAQFLWANAAYCLGLPKDMKTADMAEDAAAKWEKEKKRSIACFEAMKKYHLDILEAVHTPSAEALKRFFTTWKPETAENHPVLKPYLATNLLTANVMYAVEGVFVKDDETIRAAWDAHYNQPSADAVEGQCLVTGKKAPIARIHPNIKGVRGAQSSGASLVSFNADAFESYGHSGGQCYNAPVSEHAAFAYTTALNQLIADEKHCKVIGNTTVVYWAADGEEAYQDLLHSAVFEDDDAIDDETLDALFSHIQNGMPFDFHGVPIHPDTPFYILGLSPNAARLSVRFFLQDTFGHFIDHVRRHYERLEIVMPQRHRAYLPLWRLLGETVNKKSKDKAASPLLAGAVMRSILSDTPYPQALYNSVMLRVKADQDDKDKHIYKISAEKAAIIKACLLKNFPKGEEVTVALNEESTNTAYVLGRLFSVLEQIQEKANPDINSTIKDRFFNSAAATPGVVFPVLLKMANHHLRKLNDRKGLKITLEKMVTELEGKIEMNGQPIPARMNLNDQGLFILGYYHQTQKRYMKKEEK
>NZ_CP027569.1|WP_014016933.1|1996880_1997534_+|type-I-C-CRISPR-associated-protein-Cas5
MAIRVEVWGDYALFSRPEMKTERVSYDVMTPSAARGIIEAIYWHPGLKWIIDKIYVLSPIRFTNIRRNEVKAKASARAAKQAMTKKNVDLYLSTKEEIQQRASMVLCKVHYVIEAHFELTDKANASDNAGKFQDIIRRRLKRGQCYHTPYFGCREFPVNFREYEFDSVPTAYAGEDKELGYMLYDMDYSDLQHIRPMFFKATLHNGVLDLRDCEVHS
>NZ_CP027569.1|WP_027895262.1|1994670_1996863_+|CRISPR-associated-helicase/endonuclease-Cas3
MKMGNYIGHTSEEGRQQLLIDHLKGTSLLAERFASVFDAPEWGRMAGLYHDIGKYSAAFQRRILEDGPRVDHSTAGALLMKKIKNVPLALCIASHHSGLLNTGTKLSNVNDGTLMGRLKKELKGKLDYSAYRQELPEPVPIRKAPAFLYGKDQFYYSFFIRMLFSCLVDADFLDTERFVNDGKVQRGGFATMEELHDLFFAYYATFGKPTTPINQKRQEIYQQCLDAAEKEPGMFSLTVPTGGGKTLSSLAFALKHAIKYKKQRIIYIIPYTSIIEQTADIFRNILGDGNVIEHHMNVDYDKDYDKNYDDDKKEDDGLNRKKLATENWDAPVIVTTNVQFFESLFAAKTSRCRKVHNIANSVLIFDEAQMLPEPYLRPCIRSMGELVANYRCTAVLCTATQPSLETYFSRIGEGLKVREICPDTQGLYGFFRRVTYRFMDVDSLESLAAQLKEHEQVLCVTNSKKDARDLYQLMTGDGCYHLSTFMYPAHRRRVLAIIRQRLKDGLPCRVISTSLIQAGVDVDFPVVYREIAGLDSIIQTGGRCNREGKQRTEDSTVYIYDLPKPMNRIPAFVRRPIEITQMVAKDHADIASAESIKAYFDQLHYTLGEDQLDSKDVLKRLEVNKPAFTEIAKDFKLIEEDSRTVFIPIDDDLDNQKILAQLRSGVCSRSILRKANQYMVGVYENQFRKLEEMNKLDALEFGLYVLTDPAAYDPDTGLVVNMEDGIGIFL
>NZ_CP027569.1|WP_027895261.1|1993747_1994551_+|sel1-repeat-family-protein
MDEKERKAFEGDAFAQCAMGDDYFFEAFDADIEYKDVLYKKALYWYHRAAQKGHAASQYNLAYQYEHGLGTDADMEQAVYWYRRAANQGYGTAENNLGHLYETGNGLPQDYGLALHWYGRAARHDDADGQCNTAIMYQFGYAGPRDYDKAAYWYAQAAKKGNAIAQNNLGYLYETGRGVPQDWELAAHWYYEAAMAGDGPAQNNLGVLYRDGHGVRHDLCQAVYWFARSAASGYKEGMKNYAHALEKGEGVEKDTVEAAYWRQKGKE
>NZ_CP027569.1|WP_014016936.1|1990977_1993566_-|ATP-dependent-chaperone-ClpB
MGNEKYTQKVIEAFQSAQQIAALHYNQELSSVHMLMGLTKEPEGLLNTIFSECHTDVPMLQARLEQLLKKIPSVKGSSQLSMSTEMVRVIGKAQQLADSMHDEYISTEHILMGIVSESDDEVQQLCREFGLTQDKIMSTIKANRKANVNSDNPEENYKALEKYGRDLTAAARQNKLDPVIGRDDEIRRTIEILSRRRKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKNKTLYSLDMGSLIAGAKYRGEFEERLKSVLNEIAKSDGQILLFIDEIHTVVGAGASEGSMDAGNILKPMLARGDLRCIGATTLNEYQKYIEKDAALERRFQPVMVDQPSVEDTITILRGLKERYEVHHGVRIRDKALVAAAVLSDRYISDRFLPDKAIDLVDEAAAKLRTEIESMPTPIDELRHKIMQLEIEEQSLNKETDDASKERLAKITETKNELKEKESKLKAQWDKEKQSILRTQGLKKEIDAVKSDMAQAERNYDLAKASELKYGKLPELQKQLKEQEAYLAEHQDSQLLKEEVGEEDIAQVVSRWTGIPVTKMMTGEREKLLHLDETLHKRVVGQDDAVRVVSDAIIRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAEALFDDERNIIRIDMSEYMEKHTVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHPDIFNVLLQILDDGRLTDGKGRVVNFKNTIIIMTSNLGSHEILESKDYDEANAKVRELLKQYFRPEFLNRVDDIVVFKALQKDQVRNIAAILLERLGKRLEKQVKIHLTWTDEALQELADKGFDPQFGARPLRRLITHTVETALSRDIIAGTIREGDTVTIGYDGNNFTFTPMRVHAA
>NZ_CP027569.1|WP_022498155.1|1990317_1990821_-|hypothetical-protein
MNNTLGKHVLIDFYNCKATFTEAEDLQPLVERAFDLVDAPVEGITFFHIDDELTCIAVSGNAHICIHAYPTLSYVAVDIYSFNIDLKTSQIMSALKVNLRSDRIKATSIRRGDFGSIRDMRPKRKSKITTARRMKNTGARIKKTSVKMFNILRHPQKVRRSHRTTNK
>NZ_CP027569.1|WP_014016938.1|1989684_1990287_-|HD-domain-containing-protein
MYMVSLKQAAGIAREEMTSLDAITAELLNFIQLKSQRLYMHSLQVANYSVSVAAKLTLPKSEIEQVKYAALLHDVGLLFVSNTLLAKMPYLNRSEKAQYKRHAAGGGNMLENIPCCQDIVPYIRYHHEHWDGSGFPKHLRGANIPLGARIIAVADYYDMIINPSAEFWAKTKKQAVRELFSASGLLFDPEVVKAFIETLG
>NZ_CP027569.1|WP_014016939.1|1989401_1989587_+|hypothetical-protein
MNKSKILFVVWIIGVILLLLGMKYDMRNIFSLITGMIIGGGAVTFLYFKACHEKTTVWIKV
>NZ_CP027569.1|WP_036204050.1|2002814_2004071_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MYLTQSNVIRGLSKQDYTMLREMCQCSNNLYNVAVYTIRQHYFDTQQFLRYEKNYPICKKNENYGLLQAGVAQQILKMADRSFRSFFGLLQKVRSGDYGSKDVRLPYYREKGGWFPLVLSTNAINIKKGFLTVPMSREYAKRHNGHRIRIPVPDRLKDKTIQEVRICPMYNGRYFKIQYCYLQDPEPMKTLPDRVLAIDLGLDNLAACVTNTGTSFLMDGRKLKSINQYWNKRKARLQSIAAKQGQKTTNQLCQLAKKRNCRMQDILRKTARYILDFCISHQIGTIVCGYNRDFKRGLKLGKVTNQHFTQINLSYLRNTLKHLCERYGITYLEQEESYTSQASCLDLDDIPVYQPDAPYTGTFSGKRVRRGLYRFADGRMANADINGAANILRKSKQNLDFEGLCKGLLDSPLRIRLS
>NZ_CP027569.1|WP_014016928.1|2004749_2005532_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNIVVLVKQVPAISDIEIAKDNNLVRVGAPSMLNPVDKHAIEAAVAVKEAVGGTVTLLTMGNALAGEMMRDGIAVGADKGVLVSDERMAGSDTLATGLVLAKAIEKLGGADLVFTGKRSTDGDTGQIPPAIAQRLGMALISYANSVSVEGTTITATRLNHDGIETVQAQVPAVVSVTEKSNTPRSPKIRGKMAAKKAVFDVWKVEDLGLDAASVGTSGSATKVTELFAPEPNPVGVMIEGATPADAAANLVKDLTAKNLL
>NZ_CP027569.1|WP_027895689.1|2005545_2006547_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MELKQNICVYIEIAGGALSPLSIELLGKARQLADAKGKKVVAFVAGADTAKASQEAISYGADAVAAVEDGALAAYDSVLYTKAIVALAEKYEPSVILIGGSPDGRDLGGRLSAQLGVGLVADCTDVRFEGDDDTLTWIRPAYTGKLFVKIQTTTRPQLATISDKIFHGTPADPSRTGEIVKESVDFTGVAPSVTVTGFEPVEKEAEELTITTADIVVGAGRGVQTEDGMKAVQAFAQRIGAAFGVSKPLVDKEWAPYEWQIGITGKKIAPKIYIALGISGAIQHKLGIQDAGIIIAVNKDPDAPIFKFAHYGIVGDLFEVMPELEKQIKKIRG
>NZ_CP027569.1|WP_027895688.1|2006719_2008006_+|tetratricopeptide-repeat-protein
MDSFAARQACRDGRYDEVLAMYGKAAPDGSWSCWDYYYYAYALRKTKQYRKGREIARAGMIAFPDFTNLHGIYCWCLYYLYIQKFDERTHSPADFRRAVDAILKYSRQEAYSPYALAVWRMVDVLKNKPGQANLMGAYLSRLDPDQLPDQEKTVTLKGRERVIASDRERWYSLMSRILVKEEKYDDCITLCQQALNYFPQLHHDNDIWFSYRIALCQLRQGQVAEGRQRLENLLKYKQHWILYRGLFFASQAEGDSAAMRRYGASAFLAGGEFKGKVNFLVQFAQALENMGGYEKMAYYHYLLARDVRQDQHWKVKAELIAKVDSYAFPEPNRRDLMDGLHQFWMAGKHAGQTCHKGRIERILPGGKAGFLKDREGSQYYFRTSSLYRVRPQEGERVTFYVEDFFETGKEKPAHRAVDIEPVLLYHKS
>NZ_CP027569.1|WP_014016925.1|2008033_2008561_+|dCTP-deaminase
MILSGKEIVKHLGKEIIIEPFHPERVNPNSYNLSLHNELMVYDHNELDMAKPNPASTIYIPKSGYVLQPNKLYLGRTNEYTRTDGYIPMLEGRSSVGRLGVFIHVTAGFGDVGFAGYWTLEIFCVQPIRIYPNVEICQIYYHDIDGEYDTYKHGKYQNNTGIQPSMLWKDFEKMK
>NZ_CP027569.1|WP_027895687.1|2008575_2009556_+|P1-family-peptidase
MKEIEIMDMARTNGFRLGNAQDRQGGTGCTVLVFPDSAPCAVDVRGGGPASRESELLSPMAAASGIHAILLSGGSAFGLNASTGVMQYLEEQHIGFDTRICKVPLVVESCIYDLGCGDNVRPDAAMGYAACQAAEKGDFREGCYGAGTGATVGKLCGPDYMMKSGLGAYAVQVGDLQVGAVVAVNAVGDVLDEQGQILAGMRSRDGQGFADTRRVMLEEAGQTPTLFSQRAVGTTTNTTIGAVVTNGRFDKAQLKKIAALGSNGIVRAIRPVNTTADGDSLYAASVGSVSAELSLTGTIAAYVVEKAIRRAVCQAESLYGVPGCLM
>NZ_CP027569.1|WP_027895686.1|2009689_2010805_+|UDP-galactopyranose-mutase
MYDYVIVGSGLFGCVFAHEMHKAGRQCLVLERRDQVGGNVYCEEKDGIHIHRYGAHIFHTSDLRVWEYVNQFAKFNHFINTPVANYKGELYNLPFNMNTFAKMWGIITPEQAAAKIEGQRRAAGITEPENLEEQAISLIGTDVYAKLIKGYTEKQWGRSCKELPAFIIKRLPVRYTFDNNYFDDEYQGIPKGGYNVLIDALLDGIEVRTGVDYNRERASYLDVARKVVYTGPIDEYFGYRLGHLAYRGLHFETERYNEVNHQGVAVMNYTDRETPYTRTIEHKHFEFGRQPVTYVTKEYPAEWQAGQEAYYPVNDEANQELYRKYAALARHEYNVIFGGRLAEYKYYDMDDVIASALAAVEREGYHAETNS
>NZ_CP027569.1|WP_027895685.1|2010785_2011658_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MQKQIRKAVIPAAGYGTRFLPVTKAIPKEMIPIVDKPVIQYIVEEALQSGIEEILIITGHGKRAIEDHFDTNIDLELQLRQQGKDQLLHLVQDISSINVHYIRQKHMRGLGDAIRCAESFIDNEPFAVLLGDDVIYNPEKPALKQMMEAFSRLGATMLGCQEVPQELVSRYGIVQGQPTDDDRIVKLIDMVEKPAVDEAPSRLAALGRYILTPDIFEILRRVQPGKGGEIQLTDALRLMADREAVYAYTFSGRSYDTGNKLGFLKATVEYALRREDLGDAFREYLRTSLP
>NZ_CP027569.1|WP_027895684.1|2012830_2013286_-|nucleoside-deaminase
MTKDEFYMGKALAEAKTAYAVGEIPIGAVIVYEKKVVARAYNLRESLPCATAHAELLAIEKACRALNRWRLTGCTLYVTVEPCPMCAGAIVNSRLDRVVYGCDDPKAGAVRSLFHLVDNDRLNHRTEVTAGVRAEECAALMKDFFRQRRKK
>NZ_CP027569.1|WP_014016920.1|2013352_2014015_+|trimeric-intracellular-cation-channel-family-protein
MDAIWWQIFDLLGTTAFAVSGVFAAISRRMDLFGIFVLSAATAVGGGIIRDILIGNIPPAAFKNSIYLWIILGSMAVITIIVRYFNIRMWRRVVGKLSIWYLVCDAIGLGSFTVTGTLLGCFYYPDYWILDITLGVLTAVGGGVIRDVLAGRIPGVLRKEVYATASLLGSIFLYGAVIPFEVPLEVGAIVSFSVTVAIRLVAIRLHLNIPRIRRVRHRRA

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Crispr_ID: NZ_CP027569_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_10

2035701-2035793

Orphan

Consensus_repeat	Method
CGGGATTCCCACAAACGGGCCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027569_10

>merge|NZ_CP027569|10|2035701-2035793|CRISPRCasFinder
CGGGATTCCCACAAACGGGCCGCCCTTTGGGACGGCCCCTACGAGCTACGAACCACGAGTCACGAACCACGGGATTCCCACAACGGGCCGCCT

>NZ_CP027569|10|10|2035701-2035793|CRISPRCasFinder
CGGGATTCCCACAAACGGGCCGCC	CTTTGGGACGGCCCCTACGAGCTACGAACCACGAGTCACGAACCA
CGGGATTCCCACAACGGGCCGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_036220744.1\|2017675_2018905_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP027569.1\|WP_022497980.1\|2045427_2047065_+\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	unknown	unknown	gnl\|CDD\|236050
NZ_CP027569.1\|WP_027895674.1\|2033481_2035617_+\|DNA-topoisomerase-III	unknown	unknown	gnl\|CDD\|236078
NZ_CP027569.1\|WP_014016859.1\|2041366_2041813_+\|GatB/YqeY-domain-containing-protein	unknown	unknown	gnl\|CDD\|370480
NZ_CP027569.1\|WP_027895669.1\|2041976_2043878_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP027569.1\|WP_027895676.1\|2028021_2031420_+\|4-alpha-glucanotransferase	unknown	unknown	gnl\|CDD\|237739
NZ_CP027569.1\|WP_027895679.1\|2019496_2020657_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179997
NZ_CP027569.1\|WP_027895675.1\|2031532_2033194_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|173776
NZ_CP027569.1\|WP_051524997.1\|2020671_2021781_+\|glucose-1-phosphate-adenylyltransferase-subunit-GlgD	unknown	unknown	gnl\|CDD\|273966
NZ_CP027569.1\|WP_014016910.1\|2026401_2027838_+\|glycogen-synthase-GlgA	unknown	unknown	gnl\|CDD\|234809
NZ_CP027569.1\|WP_027895671.1\|2038138_2039941_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP027569.1\|WP_027895667.1\|2044493_2045249_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197321
NZ_CP027569.1\|WP_036220741.1\|2024261_2026370_+\|1,4-alpha-glucan-branching-protein-GlgB	unknown	unknown	gnl\|CDD\|235445
NZ_CP027569.1\|WP_027895668.1\|2043962_2044466_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027569.1\|WP_027895677.1\|2021809_2024239_+\|glycogen/starch/alpha-glucan-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_CP027569.1\|WP_014016915.1\|2018897_2019140_+\|DUF4911-domain-containing-protein	unknown	unknown	gnl\|CDD\|379806
NZ_CP027569.1\|WP_027895670.1\|2039937_2041062_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|236309
NZ_CP027569.1\|WP_020311403.1\|2041160_2041340_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP027569.1\|WP_036220738.1\|2037040_2038120_+\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP027569.1\|WP_027895673.1\|2035895_2037044_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_036220744.1\|2017675_2018905_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	1.41787e-143
NZ_CP027569.1\|WP_022497980.1\|2045427_2047065_+\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	gnl\|CDD\|236050	PRK07564, PRK07564, phosphoglucomutase; Validated.	0
NZ_CP027569.1\|WP_027895674.1\|2033481_2035617_+\|DNA-topoisomerase-III	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP027569.1\|WP_014016859.1\|2041366_2041813_+\|GatB/YqeY-domain-containing-protein	gnl\|CDD\|370480	pfam09424, YqeY, Yqey-like protein. The function of this domain found in the YqeY protein is uncertain.	1.33615e-49
NZ_CP027569.1\|WP_027895669.1\|2041976_2043878_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.13878e-41
NZ_CP027569.1\|WP_027895676.1\|2028021_2031420_+\|4-alpha-glucanotransferase	gnl\|CDD\|237739	PRK14510, PRK14510, bifunctional glycogen debranching protein GlgX/4-alpha-glucanotransferase.	0
NZ_CP027569.1\|WP_027895679.1\|2019496_2020657_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP027569.1\|WP_027895675.1\|2031532_2033194_+\|AAA-family-ATPase	gnl\|CDD\|173776	cd01026, TOPRIM_OLD, TOPRIM_OLD: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in bacterial and archaeal nucleases of the OLD (overcome lysogenization defect) family. The bacteriophage P2 OLD protein, which has DNase as well as RNase activity, consists of an N-terminal ABC-type ATPase domain and a C-terminal Toprim domain; the nuclease activity of OLD is stimulated by ATP, though the ATPase activity is not DNA-dependent. Functional details on OLD are scant and further experimentation is required to define the relationship between the ATPase and Toprim nuclease domains. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general acid in strand cleavage by nucleases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.	2.53398e-15
NZ_CP027569.1\|WP_051524997.1\|2020671_2021781_+\|glucose-1-phosphate-adenylyltransferase-subunit-GlgD	gnl\|CDD\|273966	TIGR02092, Glycogen_biosynthesis_protein_GlgD, glucose-1-phosphate adenylyltransferase, GlgD subunit. This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, TIGR02091) in a subset of bacteria that use GlgC for glycogen biosynthesis. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	2.76521e-113
NZ_CP027569.1\|WP_014016910.1\|2026401_2027838_+\|glycogen-synthase-GlgA	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
NZ_CP027569.1\|WP_027895671.1\|2038138_2039941_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP027569.1\|WP_027895667.1\|2044493_2045249_-\|exodeoxyribonuclease-III	gnl\|CDD\|197321	cd09087, Ape1-like_AP-endo, Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases. This subfamily includes human Ape1 (also known as Apex, Hap1, or Ref-1) and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Ape1 and Ape2 in humans. Ape1 is found in this subfamily, it exhibits strong AP-endonuclease activity but shows weak 3'-5' exonuclease and 3'-phosphodiesterase activities. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes exonuclease III (ExoIII) and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	4.75853e-159
NZ_CP027569.1\|WP_036220741.1\|2024261_2026370_+\|1,4-alpha-glucan-branching-protein-GlgB	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
NZ_CP027569.1\|WP_027895677.1\|2021809_2024239_+\|glycogen/starch/alpha-glucan-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_CP027569.1\|WP_014016915.1\|2018897_2019140_+\|DUF4911-domain-containing-protein	gnl\|CDD\|379806	pfam16256, DUF4911, Domain of unknown function (DUF4911). This family consists of uncharacterized proteins around 75 residues in length and is mainly found in various Thermotogav species. The function of this family is unknown.	7.32691e-18
NZ_CP027569.1\|WP_027895670.1\|2039937_2041062_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	7.41972e-129
NZ_CP027569.1\|WP_020311403.1\|2041160_2041340_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.20181e-13
NZ_CP027569.1\|WP_036220738.1\|2037040_2038120_+\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_CP027569.1\|WP_027895673.1\|2035895_2037044_+\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	1.93312e-178

>NZ_CP027569.1|WP_027895674.1|2033481_2035617_+|DNA-topoisomerase-III
MKLFIAEKPSMARELAKCLPEPHQRGNGCIRTGGGIVTWAYGHVLQQAEPQDYDPKYKRWNADDLPIIPKKWKLLVSPASKDQFKVITDLIASPDVDTIVNAGDPDREGQLLIDEILDYVGNKKPVERILLNALDEKSIHESLDDLRSNGDFVHLKESALARSRADWLIGMNLSRAYTLAARRQGHRVVFPIGRVKTPTLALVVRRQRELDNFVPVTYYVVKADFLHKNGVIRAQWQPRDTQGGLDPEGRCVDEKTAQSILERLQDRPDGTIVENKKTKKKEAQRLPLSLSSLQVLAGKRYGYTPQQVLDTAQELYERKLTTYPRSDCEYLPVNQRKDVPRILQNIGALEAGKLAEWAAGADGKIRSRAWNDSKITAHHAIIPTTVACPFDKLTSMQQHIYYLVAQAYLAQFYPIHEYDQTRMVIEAADETFIAHGKTVTVPGWKVLYQSDKHDEEDEEKGTLPAVRKGDGVHYQNGQVDKKATKPPPRFTPSTLLAAMKEIYKYVKDESLKKKLKEVQGIGTEATRATIIQELIQRKFLTTEGKKKYLKPTDDAYLLVDSLPDEMLYPDETAVWEERLYQMSLGKDDLNHFLHDQLSFLDTLVTAARKVVMHLAGIKVCPVCGSAMVKRHGKYGDFYGCSNYPSCRHTEPVEGEKKRPDAKPSPYPCPRCHKGTFQKRTGPYGPFWVCSQEGCNTKCADVDGVPSYYARH
>NZ_CP027569.1|WP_027895675.1|2031532_2033194_+|AAA-family-ATPase
MYLTYMRIQNYRNLQDVEMTFHEKANYIVGENAIGKSGLLRLISYMSDGRNVEEDDYADVTRPIVITMDLHLLQSEREHFADTPDERRQSVRVRMEMRVSDMYPHLYDDNSGEELPLELIRRLRYVSYSAAVPEEQRVPPRIYRALEQKLSNWGEAHWDGLSDEAKAFIHHEVAVGTMDSSYFINIFLLSRLLCRMDRPRADNMKFISLAALCIITQVYLMSISRAVPLEHNVIVDEAGKRYLPLVISIDEPEMHLHPYMQRSVLHYYQQLLNNEDPQFCTLLKDLFGLDGLRGQLFIVTHSTDSLIDDYRHIIRLYRNKQGLVKAACGAGFHFSEEIEKHLIMHFPEVKEALYSRSVLIVEGETEYGCFQHFGKTLDLPFDYYGICLINARGESSISKIKKLLEYFKIPVVALYDADVKGSHKSERGVYFTNEICFEMDLAKTMIDHGQRRDLDRIINTACGEHARATTDMIKKACRKLDVNFHDYPARLLWHVNPRNKKALYIYYFAWLYSNKGVILGRLIGQSLKKEDIPPSFVRAIEAAGQLAKVTKAV
>NZ_CP027569.1|WP_027895676.1|2028021_2031420_+|4-alpha-glucanotransferase
MDLRLYHNSHEFYYRSSFGAVPSGSRLILRLRAGGSDARNCRARIRLWQSNVGESFVPMTYQDGIFTGCVTMPPKGCLVWYYFIVDDGHETVYYGNNYDRLGGEGAKYPEVPPAYQVTVYDKDAHTPDWFKHAIVYQIFPDRFRHGTHTTGRLYGKKGAVIHSDWDDVPYYCKREGQGDIVYYDFFGGNLAGIREKLPYLKELGITAIYLNPIFESSSNHRYGTADYFRVDPMLGTNEEFAAFCQAAKEAGIHIILDGVFSHTGADSIYFNRFGNYPGVGAYQSKESPYYEWYRFKQYPDDYESWWGVSDLPDVEETTPSYMDFIIDSEDSVLKYWLNEGISGWRLDVIDELPVPFLRQFYHTLKEEKPDAILIGEVWEDASNKVSYSEQREYLCGYDIDSAMNYAQRAIMLDFMTGAKDARRMNAELTRLIENYPPENFYAMLNLISSHDIERILTVLTQAGGTDVATAEETGKKRLKLLTAWQMTMPGAPCIYYGDEVGVTGGKDPDNRRTYPWGHEDLDLLSWTKALTRLRTAHDALQTGRFIPLYADGDVFAFARVIEGGRDVFGKPAEDGFFIIAMNRNPSALRTISIYTDGLAYGKLTNALHPRMTPVTTVNSRLTLTLPPLKVVILQGKEAGTKRAGVLLHPTSLPAACGNGVLGPAAYRFVDFLKAAGQRVWQILPLTPPLMGDSPYLSESAFAGNEALISLEVLRDWGWLRQEALDDFLAQGQKTASWHSLAAYKAKILWDMSHDPDLTIPWEPFRAFCEKNAYWLDDYALFRAVRDFFGGRCWTEWPEDIRHHSREALAQYGRELAGAVSHVKFMQYIFSRQWHDVRAYAAKNGVSVLGDVPMFVAHNSVDCWAHQDQFDLDEMGNPSSVAGVPPDYFSADGQLWGNPLYDYQAMAADNYQWWTDRFRRMMDLVDEVRVDHFRGFAAYWAVPAGSETAKSGAWKEGPGLDLFRAVYQKIGRLRLVAEDLGVITDDVCTLKDALHLPGMKVIQFHLKDRADGRLAFDTEPDCIAYTGTHDNNTIRGWYEDDLTPSQQLHVRQMLGLSDEAAPQEIVGALIAYTCRRRAETVIIPMQDLLALPSSGRMNTPGVAEGNWHWQLKDGQLTFDIARWLAKVCRESGR
>NZ_CP027569.1|WP_014016910.1|2026401_2027838_+|glycogen-synthase-GlgA
MNVLFVASEAVPFIKTGGLADVMGALPKALAKKGMDVRLVIPKYSRIAEEAKKQMKEVTTGIVNLAWRQLYYGVEEIKQDGVTVYFIDNEWYFKRDGLYGYGDDDERFAYFCRAVLTMLPKIGFKPDIIHCNDWHTGLMGVFLKEDFWHDDFYKGIKVIYTIHNLKYQGIYPPSIMRDIIGLPQELFDKGNLECDGCVNYMKSGMVYADHITTVSPSYAQEITYPYFGEGLDGYIRDNGEKVTGIINGLDVDVYNPETDPYIKRQYSVANARAGKRENKDALRAELGLRIKRGVPLIAMVTRLVEDKGLDLVTRIMDELVDDDVQLVLVGTGDAGYENAFRELARRHPTKVSANITFNEALAHKVYAAADMFLMPSRYEPCGLSQLIALRYGAIPIVRETGGLKDTVHPFDKYSKQGNGLTFPNFNAHELLFTTKRAMGYYEDTALWDILVRNAMTSDYSWDRSAEAYLNLYKKVLQQ
>NZ_CP027569.1|WP_036220741.1|2024261_2026370_+|1,4-alpha-glucan-branching-protein-GlgB
MKLSAIDEYSTFLYHQGTNYASYRLFGAHFTVLRRKPCVRFAVWAPHAQQVSVVGDFNHWDADANPMERSSCGNGIWVTHIAGLQEGDIYKYAITTASGERILKSDPYAFWSEVRPNTASKLTKLHYAWRDKKWMDSRSAYDSYRKPMLTYEVHLGSWRRDEDGEMLSYRAIAPQLVDYVKQMNYTHIELMPLCEYPFDGSWGYQGTGYFSATSRYGKPEDLMYLVDLCHRNGIGVILDWVPGHFCRDAHGLRHFDGEPCYESGNPMLAENKEWDTMNFDYGRTEVQSFLISSALFWLSQFHIDGLRIDAVANMLYLDYGHADGDWQPNKYGGRENLEAIDFLRHLNTAVFKEYPQALMIAEESSAWPLVTKPVDVGGLGFNYKWNMGWMNDMLRYMSLDPLFRKDNHNLITFSLCYAFSENFILPLSHDEVVHGKHSLLDKMPGDYWQKFAGLRAFYGYWMSHPGKKLLFMGSEFGQFIEWKYDDSLDWHLLKYPMHQAMHDYVRSLNTYYVDHPELWEEDCDWSGFSWISCDDCDNSVIAFYRTGKDESDMTVVVCNFTPVVRHSYRFGVPRKGTYVEVFNSDATAFGGSNVLNEGEFEAQDVPMHGMDQSLELTLPPLATIYLQLTGSAKKKAVTKRRRRRTVKTDKAADGTVKKTAKAPGKKATTRGKGKAKTAASEKKTAATRKRRPGRPAKKEADV
>NZ_CP027569.1|WP_027895677.1|2021809_2024239_+|glycogen/starch/alpha-glucan-phosphorylase
MKKWQDKEEFKKLFTEKAHILWEKDLRDMTLNEVYQTIAYMIRDLVSEDWIRTNEIYAEQKVKQVYYFSIEFLIGRLLESNLLGIDMDDICRQGLEDLGWDLDKVIPAERDPGLGNGGLGRLAACFIDSLAALQLPGHGNSIRYQYGLFNQRIVDNQQVELPDNWLVNGYPWEVKKVDKAVYVRFGGNAYMRPDEDGSLECVHEKYSSVRAVPYDVPIIGYHNNTVNTLRLWRAEYSREQLYQELSLGDRRRAFRYKDSVQQISRFLYPDDSNEDGRRLRLMQEYFFVSAGLQSIVRHYKKKYHESIYKFDRYVAIHINDTHPALVIPELMRILMDEEGVSWDAAWNITVRTVAYTNHTILPEAMEKWSIPMFKELLPRIYLIVEEINNRWLKEVRSLYPGDESRARDVAVLWDGQVHMAHLAVLGSHSVNGVAEIHSQILKDSTLHQFYTCFPHRFSNKTNGISHRRWLIEANPQLASLIDEAIGDGWRRTPSKLQDLMPFADDPSFQEQLTRVKKERKDILARYIRDRYDTDVRTDSIFDIQIKRIHLYKRQTLNILHILHLYYLLKDNPKLKITPRTFLFGGKAAAGYGEAKETIRLINVVAHMVNSDRRISKQMKVLFLENYNVSLGQLLFPAADVSEQISTAGKEASGTGNMKFMMNGAITLGTLDGANVEIHQKVGDENCVIFGLRADEVMNYYIHGGYSSWQMYSGDADIRRLMDALVDGSISGEHFGMLYSSFLDKNDEYFVLKDFKSYCQAQQEIAKRYGNHPQWCHSSVVNIAQSGYFSSDRTIQQYADDIWRIKPVKH
>NZ_CP027569.1|WP_051524997.1|2020671_2021781_+|glucose-1-phosphate-adenylyltransferase-subunit-GlgD
MIGLINMREDHPLQEINDTRPLSTLPIGGKYRLIDFTLSNMVNAGIENVGLLLSSQSRSVLDHIRSGKEWGLAHKGDGLFYLPEERADIEHPVEGDIAAYYKNLVFVKRANKRYVLLSGCDMVQNIDYDEVLHFHRHHNADVTLIYQQQKYDFDREGYILTIDDVCKDRVLSIEAKPEVKAGDNLYQRGILIDCDVFQHCIRRAYAQGYTHFITDVLQRNVDRLRIFGYNYQGYAKRIDSVHSYFQVNMDLRDSRIWHELLLKDKDHRIYTKIKDEAPAKYMEESHVTNSLVANGCIIEGRVENSILFRRVKVGKNAVIRNSIIMQHSVVGDDAQLDYVVCDKNTIIQPEAVLSGSHDNPLCIGKRSVR
>NZ_CP027569.1|WP_027895679.1|2019496_2020657_+|glucose-1-phosphate-adenylyltransferase
MKKSNCLAMILAGGKGSRLGVLTKDQAKPGLLFGGKYRIIDFPLSNCRNSGIDTVGILTQYQPLELNWYIGNGSSWNLDSTKGGTYVLPPYQSDGGSNWYRGTADAIYQNLNFVEMVGDDYVLILSGDHIYSMDYDKMLNFHKKHHAKATIGTIRVPWDEASRFGIMVADENMRITKFQEKPAKPESNLASMGIYIFDRDVLESYLKADAKDEKSEHDFGKNVIPAMLGDKIPLYAYPFEGYWKDVGTIDSLWQANMDLIADEPPIDLRDSHWRIYSGNQSFPPHLIGPKGSAKSSLIAEGSEIFGTVSNSVIFYGVTIKEGAKVTNSVIMPGTVVEENAVIDKAILGERCHIYPGAVLHNEDGSVAVLGRKGELKPEKVTAKGEH
>NZ_CP027569.1|WP_014016915.1|2018897_2019140_+|DUF4911-domain-containing-protein
MFDEDWVYFQAPPAEMTFINRIIEGCDYLGVVTALDGRKGLGFVRTTKDTAGETKEVLQSLPIPVRILSRQEALAAAGQQ
>NZ_CP027569.1|WP_036220744.1|2017675_2018905_+|U32-family-peptidase
MELLAPAGSMDKMKMAFLYGADAVYLGGKSFGLRAFSDNFSNEELKEAVDYAHARGKHIHVTVNIFPHNDDLKALPDYLVYLRDIGVDAILIADPGIFAMARQLVPDLPIHVSTQANTTNWASTKFWHDNGASRVVMAREVSLRDVKEIHAKVPDVELEGFIHGAMCISYSGRCLLSNYFTQGDRDSNRGECVQCCRFKYNVVEEKRPGQYFPVVEDERGTYIFNSKDLCLLPYLPDLYDAGLSSLKIEGRMKSIHYVATVTKVYRQAFDAYEADPEHFTVRQEWLDELEKISHRPYTRGFSVSRPTAADQVYSQSSNTQTHEFIGLVKSYDEEKGLAWVEQRNHFKLGQTVEFLQPKGQLVRYTIDRIVDEDGQALDAARHAQQLVGLAVPQRLEPYSMMRRQVKSHV
>NZ_CP027569.1|WP_027895673.1|2035895_2037044_+|cysteine-desulfurase
MKRIYLDNAAATPMDPRVLDVMMPYLTTAYGNPSSLHYFGQQARAAVQTARSQVAHCLGVKGEDLVFTSGGTEADNLAILGFLRANFPDGGHLITTAVEHHAVLRTFQALEQKGYDVTYVPVEADGRVTAEAVAQALRDDTVLISVMYANNETGMVQPVDAIGALARQKGIAFHVDAVQAFGYVPIRPLEQGIDMLTVCSHKIYGPKGVGALYIRHGLQVAAEAYGGPQEHRLRAGTENVAAIAGFGKAAELLEAERNDRVLAARRLTDTVYDRLIKGDARFHLNGRRNHVLPNIIDFSVDGVDSAILLIALDLQGLAVSAGSACEAGAVEASHVLQAMGIEEKWLRSSIRLSVGKENTLDEIKRAVAIIGDAVRKSRGESL
>NZ_CP027569.1|WP_036220738.1|2037040_2038120_+|tRNA-2-thiouridine(34)-synthase-MnmA
MKRVAVAMSGGVDSSVTAGLLKQQGYDVIGITLRLWEEDPACTIDNVHACCSLSSVDDAKAVASVLGIPHYTLDFRDIFRRDVIDYFVDAYVHGKTPNPCIACNKFIKFGLLWEKARQFGADFLATGHYARIEKNEATGIYSLLRGTDRRKDQSYVLYQLTQDLLPHILFPMADLEKVHTRELAKEWGLPVFNKPESQDICFIPDNDYKGFLQHERKGIFKPGDFVDKEGHVIGRHKGIAAYTIGQRRGLNLGGPGGPYYVTALDVAHNKVIVGSERDLFSKTVHASEATWVEQTPDAPFRALGKIRYAAREAACTVYPDGDSLRVEFDDAQRAVTAGQALVLYDAGTGERVLGGGVIQ
>NZ_CP027569.1|WP_027895671.1|2038138_2039941_+|elongation-factor-4
MSTDHIRNFSIIAHIDHGKSTLADRMLEMTGTVPKREMEDQLLDTMDLERERGITIKAQSARLIYDAQDGKQYTLNLIDTPGHVDFNYEVSRSLAACEGALLIVDATQGVEAQTLANVYLALEHDLEIIPIINKVDLPSADPDRVCKEIEDVIGLDASDAIMISAKTGYGVDKVLEAIVQRIPAPADEGDKPLRALIFDSHFDAYKGAIANIRIMEGSIKPGQRIRMMASGKEFEVIETGVFLPQMHPVPSLECGSVGYLAASMKNVRDCRVGDTVTLADNPAKEALPGYRKAVPMVYCGLYPVETNDYDNLRDALEKLHLNDAALLFEPETSSALGFGFRCGFLGLLHMDVVRERLEREYNLSLITTAPSVIYHVYCTDGTMVEVDNPSQMPDMTKIDHIEEPLVKTTIIIPKDMVGTVMEISQNRRGQYVTMDYLDDTRVSLVYNLPLCEILYDYFDVLKSATRGYASLDYELNGYQASPMVKMDILINGDVVDALSVIVHKDFAARRGRALVEKLRSLIPRQLFQIPIQAAVGNKIIARENVAALRKDVLAKCYGGDISRKRKLLEKQKEGKKRMKQFGTVEIPQEAFMAVLKVDEE
>NZ_CP027569.1|WP_027895670.1|2039937_2041062_+|radical-SAM-family-heme-chaperone-HemW
MRLGLYVHIPFCRHKCLYCDFPSYAGLERYRDGYVQALCRDIAASPYAGEEADTIYIGGGTPSLLAAGDIDCILKALRQTFRMTSHAEITVEANPDSLDYDKAAALADSGVNRLSLGVQSFSDAMLSFLGRVHTAAQGERAIQAAYDAGIHNLSLDLMYGLPGQTLADVRRDVERLSQLPVVHASIYSLIVEDGTQLKAGLDKGEWQLPPDEATESMARTVHEAMHGYGFHHYEISSYAKGPFESRHNSKYWTYEPYIGFGVSAHSFDGKMRWANVANIPAYIQKAGKGSVVAESVAIDAERAVEDYCFLALRRRAGIDYGDYARRFGKAIEDDFGPVIDQLVRQGLLERTAQGCCLSEEGLGYGNYVFSKFIR
>NZ_CP027569.1|WP_020311403.1|2041160_2041340_+|30S-ribosomal-protein-S21
MAEIRVGKNETLDSALRRFKRSCQKAGVLSEVRKREHYEKPSVRRKKKSEAARKRKYRA
>NZ_CP027569.1|WP_014016859.1|2041366_2041813_+|GatB/YqeY-domain-containing-protein
MSLKEELLQDMKAAMKAKEAGKTALSVIRMVRSAIRNTEIDGKCELDDAGVGAVIAKEMKQRKESLAEFEKAGRSDLVEETKAEMAVLEKYMPKQLTADEIRQIVNDAVAGQSGLKMGDVMKLVMPKVKGKADGKLVSQIVREILQNN
>NZ_CP027569.1|WP_027895669.1|2041976_2043878_+|glutamine-synthetase
MTKDDLVYVIPAGQYGKEGVLALLEQHPEIKFVSLVGIDLAGNDTDEKIPISVFFDEYDKFFNATAFQTDGSSVVLPGIATLSNARVDIKADPSVNWFIDYNDGNIDPETGKPVGTLRIPSFLRHATGFIDSRSILRNTCDYVGDQILALVKKYGIKGTSINPDDIEKIVFTTATELEFWVKTPSQDVATRLLSASQKMQEQYWQRTHGVVRTALEQTVERLEKYGFAPEMGHKEVGGVKAQIDDSGKLTFVLEQLEVDWKYTNDPVQTADNEIAARIIVREVFRENGLEVTFQAKPIHGVAGSGEHTHFGIGAIMKNGKFVNLFNPDDMKSEFLSALGYGAIMGILKHYEVINPFVSSTTDSLNRLKPGFEAPVCIVTALGGETPDVPTRNRSVLAGLIRDIASPAATRFELRAPNPFTNTFIAIAMCYLGALDGIKYALSSGKSTAELLAELSKKPGEDADYLEKDRAYRSEVDVFENFNDEERNAMFGKAPRTVWENFKALSTYPEKLDDLACDAFQKRIMESFKLGALSRWALELQYRIIPENLSKVIAAEQLHADGDSNALEVERWTKINALRTELGRDTEKSLSIFSKIKQALAADDYDTASNLMVEMSDKMDQLTDMYYEYSHNAF
>NZ_CP027569.1|WP_027895668.1|2043962_2044466_-|hypothetical-protein
MLKKLTTALLACTAFALPQAFALSVLPEAGVSLGVGTKEQYAEAKVLPRTTIGYKRADRDQYGNQNDIYAKYNVIGSKVQLLGGWRNNIDEQSSSTSFYGGIGIAAPHILGLQPYATYVKGSHFAETQAGLNYNIAFGWGLNINYHNYMPEDGDNEHGVGAGVTFHF
>NZ_CP027569.1|WP_027895667.1|2044493_2045249_-|exodeoxyribonuclease-III
MTKFISWNVNGLRAVMKKGFLDIFQALDADVFCLQETKLQAGQIDLDLPGYEQYWNYADRKGYSGTAIFTRLAPLSVRYGMGIDEHDHEGRLITLEFPDYYFVTCYTPNSQSELARLPYRMKWEDDFRQYLLDLHQEKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERQKMTDLLAAGFTDTWRYFYPDVTGVYSWWSYRFKARQNNAGWRIDYFLTTKDLDSRLAKASIYTDITGSDHCPVGLELK
>NZ_CP027569.1|WP_022497980.1|2045427_2047065_+|alpha-D-glucose-phosphate-specific-phosphoglucomutase
MAVHELAGTKVRKEDYIDLNAIAAAYHSTHPDVTDPHQQVRFGTSGHRGQAGNGSFTEDHVAAITQAVCNFRKQFGAEGPLFVGEDTHYLSKLAYETVLSVLAANGVTAYVDSEGDFVPTPSVSRAILRYNRRREERLADGLIITPSHNPPEHGGIKYNPITGGPAGSDITKAIETEANRLLAGHNQDVRMMAYDQAKDSAFVVPYDYKGLYVAELESIIDMDAIRDAKLRILVNALGGSGMNYWHQISDVYRLDLDFVNDTYDPQFTFMNYDHDGKVRMDCSSAYVMSAVTGQAADYNLILANDPDYDRFGIVSGAEGMISANAFLTVAAHYLMTHRNFEGLGIAKTVVTTDMLARAAKLLDIPLYEVPVGFKYFGPLYTEGKIAFSGEESAGGSFIAKDRSVWTTDKDGMIMCLLAAEIRAVTGKSPIEYYNDLCEKLGRPYTMRSDAPATLEEKDKISALTEDDVTEKTLCGSPITAVLSKSPYGDFAIGGVKITTDDGWVAARPSGTEDLYKLYAESFVSPDQAGKLLEEGKALISKALNK

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Crispr_ID: NZ_CP027569_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027569_11

2452257-2453635

TypeV

I-C

Consensus_repeat	Method
GTCGCACCCTTCATGGGTGCGTGGATTGAAAT	PILER-CR
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CRISPRCasFinder
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CRT

20 spacers

cas4,cas1,cas2,cas14j

The CRISPR arrays of NZ_CP027569_11

>merge|NZ_CP027569|11|2452257-2453635|PILER-CR,CRISPRCasFinder,CRT
ATTTCAATCCACGCACCCATGAAGGGTGCGACTTGCGGATTTTTTCGCTACGTTCCATTTTCAGAAGCATTTCAATCCACGCACCCATGAAGGGTGCGACGGGTATTCTACCCCAAAATGCTTTAGACTGGTTTATTTCAATCCACGCACCCATGAAGGGTGCGACGGGCAGTTCCATGTATACCGTATGGACGGCATTATAATTTCAATCCACGCACCCATGAAGGGTGCGACTTTTTGCCCACCATCGCCGAAATCCGGCGAGCCTCGATTTCAATCCACGCACCCATGAAGGGTGCGACGCTGACACAACCGGCACAGATTGGCGATATGCTCATTTCAATCCACGCACCCATGAAGGGTGCGGCCTTTCAGAAAGCCAATGAGTTCCTCATGACTAAAATTTCAATCCACACACCCATGAAGGGTGCGACATGTCGAAAATGGGACGCTGACGCCGTATTACAAGATTTCAATCCACACACCCATGAAGGGTGCGACATTGTCGAGAGAGCAGTTCGTCTTGTCCCCGTCGAGATTTCAATCCACACACCCATGAAGGGTGCGACATTGTCGAGAGAGCAGTTCGTCTTGTCCCCGTCGAGATTTCAATCCACGCACCCATGAAGGGTGCGACATAGTGACGCCGGAACAGGTAGATACAGCGGTACAATTTCAATCCACGCACCCATGAAGGGTGCGACGTCATGAAATGCTGTGACCGGTCGATATTGTTCTTATTTCAATCCACGCACCCATGAAGGGTGCGACGTGCGGTTTTAATCCAAAATCTGGCTATCACCAGCTGATTTCAATCCACGCACCCATGAAGGGTGCGACCGGGAAATTTTCGGTTCGCAAGACCTAGATAAACGGATTTCAATCCACGCACCCATGAAGGGTGCGACTTGGCAATGATCTTGATTAAAGGGGGTAATGCAAAATTTCAATCCACGCACCCATGAAGGGTGCGACAGATATACGCTCCATCTTCTGCCTGCCCATTTCGTATTTCAATCCACGCACCCATGAAGGGTGCGACCTATCAGCCTTCCGTTTGGCTTCCGGGTCGCCATAATTTCAATCCACGCACCCATGAAGGGTGCGACCTCAGTGCTTTTCCTTTGCGCTGGTTTTCCTTGTATTTCAATCCACGCACCCATGAAGGGTGCGACGCGCTGTGACCAGCCCGATGATGACCAAACAATCCGATTTCAATCCACGCACCCATGAAGGGTGCGACGTGATTTCAAACGGCTCATCGCCGCGGATAATATCTCATTTCAATCCACGCACCCATGAAGGGTGCGACTCCATGCATTAAAAACCGTGGACCGTGGCGTGAAAATTTCAATCCACGCACCCATGAAGGGTGCGAC

>NZ_CP027569|11|8|2452257-2453635|PILER-CR
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTGCGGATTTTTTCGCTACGTTCCATTTTCAGAAGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGTATTCTACCCCAAAATGCTTTAGACTGGTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGCAGTTCCATGTATACCGTATGGACGGCATTATA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTTTTGCCCACCATCGCCGAAATCCGGCGAGCCTCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCTGACACAACCGGCACAGATTGGCGATATGCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGGC	CTTTCAGAAAGCCAATGAGTTCCTCATGACTAAA
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATGTCGAAAATGGGACGCTGACGCCGTATTACAAG
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATTGTCGAGAGAGCAGTTCGTCTTGTCCCCGTCGAG
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATTGTCGAGAGAGCAGTTCGTCTTGTCCCCGTCGAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATAGTGACGCCGGAACAGGTAGATACAGCGGTACA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTCATGAAATGCTGTGACCGGTCGATATTGTTCTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTGCGGTTTTAATCCAAAATCTGGCTATCACCAGCTG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CGGGAAATTTTCGGTTCGCAAGACCTAGATAAACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTGGCAATGATCTTGATTAAAGGGGGTAATGCAAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AGATATACGCTCCATCTTCTGCCTGCCCATTTCGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTATCAGCCTTCCGTTTGGCTTCCGGGTCGCCATA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTCAGTGCTTTTCCTTTGCGCTGGTTTTCCTTGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGCTGTGACCAGCCCGATGATGACCAAACAATCCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTGATTTCAAACGGCTCATCGCCGCGGATAATATCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TCCATGCATTAAAAACCGTGGACCGTGGCGTGAAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC

>NZ_CP027569|11|11|2452257-2453635|CRISPRCasFinder
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTGCGGATTTTTTCGCTACGTTCCATTTTCAGAAGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGTATTCTACCCCAAAATGCTTTAGACTGGTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGCAGTTCCATGTATACCGTATGGACGGCATTATA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTTTTGCCCACCATCGCCGAAATCCGGCGAGCCTCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCTGACACAACCGGCACAGATTGGCGATATGCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGGC	CTTTCAGAAAGCCAATGAGTTCCTCATGACTAAA
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATGTCGAAAATGGGACGCTGACGCCGTATTACAAG
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATTGTCGAGAGAGCAGTTCGTCTTGTCCCCGTCGAG
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATTGTCGAGAGAGCAGTTCGTCTTGTCCCCGTCGAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATAGTGACGCCGGAACAGGTAGATACAGCGGTACA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTCATGAAATGCTGTGACCGGTCGATATTGTTCTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTGCGGTTTTAATCCAAAATCTGGCTATCACCAGCTG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CGGGAAATTTTCGGTTCGCAAGACCTAGATAAACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTGGCAATGATCTTGATTAAAGGGGGTAATGCAAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AGATATACGCTCCATCTTCTGCCTGCCCATTTCGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTATCAGCCTTCCGTTTGGCTTCCGGGTCGCCATA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTCAGTGCTTTTCCTTTGCGCTGGTTTTCCTTGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGCTGTGACCAGCCCGATGATGACCAAACAATCCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTGATTTCAAACGGCTCATCGCCGCGGATAATATCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TCCATGCATTAAAAACCGTGGACCGTGGCGTGAAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC

>NZ_CP027569|11|7|2452257-2453635|CRT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTGCGGATTTTTTCGCTACGTTCCATTTTCAGAAGC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGTATTCTACCCCAAAATGCTTTAGACTGGTTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GGGCAGTTCCATGTATACCGTATGGACGGCATTATA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTTTTGCCCACCATCGCCGAAATCCGGCGAGCCTCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCTGACACAACCGGCACAGATTGGCGATATGCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGGC	CTTTCAGAAAGCCAATGAGTTCCTCATGACTAAA
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATGTCGAAAATGGGACGCTGACGCCGTATTACAAG
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATTGTCGAGAGAGCAGTTCGTCTTGTCCCCGTCGAG
ATTTCAATCCACACACCCATGAAGGGTGCGAC	ATTGTCGAGAGAGCAGTTCGTCTTGTCCCCGTCGAG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	ATAGTGACGCCGGAACAGGTAGATACAGCGGTACA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTCATGAAATGCTGTGACCGGTCGATATTGTTCTT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTGCGGTTTTAATCCAAAATCTGGCTATCACCAGCTG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CGGGAAATTTTCGGTTCGCAAGACCTAGATAAACGG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TTGGCAATGATCTTGATTAAAGGGGGTAATGCAAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	AGATATACGCTCCATCTTCTGCCTGCCCATTTCGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTATCAGCCTTCCGTTTGGCTTCCGGGTCGCCATA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	CTCAGTGCTTTTCCTTTGCGCTGGTTTTCCTTGT
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GCGCTGTGACCAGCCCGATGATGACCAAACAATCCG
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	GTGATTTCAAACGGCTCATCGCCGCGGATAATATCTC
ATTTCAATCCACGCACCCATGAAGGGTGCGAC	TCCATGCATTAAAAACCGTGGACCGTGGCGTGAAA
ATTTCAATCCACGCACCCATGAAGGGTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027569.1\|WP_014016548.1\|2448380_2449832_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|223903
NZ_CP027569.1\|WP_027895026.1\|2463629_2464700_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP027569.1\|WP_027895022.1\|2457479_2458781_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|376689
NZ_CP027569.1\|WP_027895025.1\|2462809_2463637_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP027569.1\|WP_014016547.1\|2450062_2450353_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP027569.1\|WP_014016541.1\|2460016_2460889_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
NZ_CP027569.1\|WP_027895179.1\|2450362_2451394_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP027569.1\|WP_027895178.1\|2451390_2452059_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|187768
NZ_CP027569.1\|WP_027895024.1\|2460955_2462020_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270381
NZ_CP027569.1\|WP_014016549.1\|2447902_2448172_-\|chorismate-mutase	unknown	unknown	gnl\|CDD\|376623
NZ_CP027569.1\|WP_027895021.1\|2455964_2457200_+\|membrane-protein	unknown	unknown	gnl\|CDD\|226458
NZ_CP027569.1\|WP_022497430.1\|2442722_2443298_-\|chromate-transporter	unknown	unknown	gnl\|CDD\|376780
NZ_CP027569.1\|WP_022497815.1\|2462030_2462810_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP027569.1\|WP_106669728.1\|2464781_2465540_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
NZ_CP027569.1\|WP_027895023.1\|2459110_2459833_+\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225516
NZ_CP027569.1\|WP_106669715.1\|2454269_2455385_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP027569.1\|WP_027895183.1\|2442140_2442707_-\|chromate-transporter	unknown	unknown	gnl\|CDD\|376780
NZ_CP027569.1\|WP_027895182.1\|2443424_2444297_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP027569.1\|WP_014016550.1\|2445740_2447906_-\|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl\|CDD\|273632
NZ_CP027569.1\|WP_027895181.1\|2445080_2445728_-\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970

Protein	Function_ID	Function_description	E-value
NZ_CP027569.1\|WP_014016548.1\|2448380_2449832_+\|amino-acid-permease	gnl\|CDD\|223903	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism].	0
NZ_CP027569.1\|WP_027895026.1\|2463629_2464700_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	7.60162e-154
NZ_CP027569.1\|WP_027895022.1\|2457479_2458781_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|376689	pfam01964, ThiC_Rad_SAM, Radical SAM ThiC family. ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine biosynthesis. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis. Thic is a member of the radical SAM superfamily.	0
NZ_CP027569.1\|WP_027895025.1\|2462809_2463637_-\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	7.73377e-68
NZ_CP027569.1\|WP_014016547.1\|2450062_2450353_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.27564e-29
NZ_CP027569.1\|WP_014016541.1\|2460016_2460889_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	8.32912e-178
NZ_CP027569.1\|WP_027895179.1\|2450362_2451394_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP027569.1\|WP_027895178.1\|2451390_2452059_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	1.28417e-33
NZ_CP027569.1\|WP_027895024.1\|2460955_2462020_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270381	cd13663, PBP2_PotD_PotF_like_2, The periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold. This group represents the periplasmic substrate-binding domain that serves as a primary polyamine receptor of an uncharacterized ABC-type transport system from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, as well as plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.56805e-162
NZ_CP027569.1\|WP_014016549.1\|2447902_2448172_-\|chorismate-mutase	gnl\|CDD\|376623	pfam01817, CM_2, Chorismate mutase type II. Chorismate mutase EC:5.4.99.5 catalyzes the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine.	4.72484e-22
NZ_CP027569.1\|WP_027895021.1\|2455964_2457200_+\|membrane-protein	gnl\|CDD\|226458	COG3949, COG3949, Uncharacterized membrane protein [Function unknown].	2.8947e-09
NZ_CP027569.1\|WP_022497430.1\|2442722_2443298_-\|chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	1.02276e-35
NZ_CP027569.1\|WP_022497815.1\|2462030_2462810_-\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	6.4153e-77
NZ_CP027569.1\|WP_106669728.1\|2464781_2465540_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	5.36237e-32
NZ_CP027569.1\|WP_027895023.1\|2459110_2459833_+\|SIMPL-domain-containing-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	8.35922e-44
NZ_CP027569.1\|WP_106669715.1\|2454269_2455385_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.80001e-58
NZ_CP027569.1\|WP_027895183.1\|2442140_2442707_-\|chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	6.9308e-37
NZ_CP027569.1\|WP_027895182.1\|2443424_2444297_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.09226e-50
NZ_CP027569.1\|WP_014016550.1\|2445740_2447906_-\|ATP-dependent-RecD-like-DNA-helicase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP027569.1\|WP_027895181.1\|2445080_2445728_-\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	5.56422e-42

>NZ_CP027569.1|WP_027895178.1|2451390_2452059_-|CRISPR-associated-protein-Cas4
MEYDEDDFLMISGIQHFSFCPRQWALIHIDQVWDENMKTMEGNIIHENCHNPDFIEKRGEILISRGIRIASRTLGVTGQCDVVEFHRDDDGGGRLYGHNGLWLPFPIEYKRGKTKDINADRLQLCCQAMCLEEMLGVSIYQGALYYHETHRREPVELTEPLRQEVRKMLEMMHDYFKRGYIPKVRPKKGCPSCSLKEICLPVICKKKSAQPYYEAMLGSDDV
>NZ_CP027569.1|WP_027895179.1|2450362_2451394_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRKLLNTLYVMTPETYLALENDNIIILLDEKVLGKFPLHTLEQIVYFGYKGASPALMGECAKRNIGLYFYRPNGRFLARTVGTTQGNVLLRKEQYRCSDDEIRSCQIAKYFIVGKIFNSRSVLERAKRDHPMSFDIQSLKEISSSLLRLAKEARKCCDLDSLRGYEGEAASLYFSVFDHLILQNKKIFSFKQRMKRPPKDSVNALLSFCYTILANDCASALEAVGLDAYVGFLHRDRPGRISLALDLMEELRSIYADRFVLTLINNRKINASAFERQENGAVLLNDKGRKIFLTDWQNRKKDIIKHPFLDEKIPWGLVPFVQAQLLGKVLRGDLDVYPSFLWK
>NZ_CP027569.1|WP_014016547.1|2450062_2450353_-|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVSTEDDAGKRRLHQVAKQCEKYGQRVQNSVFECLLQPDELMLLKHQLIKIMDENKDSIRFYNLGKKYQSKIEHYGAKNTYDPEDVLIF
>NZ_CP027569.1|WP_014016548.1|2448380_2449832_+|amino-acid-permease
MEETQQQQGLRRSLKARHMNMIAIGGAIGTGLFVAGGETVSSAGPGGALVAYALIGIMVYFLMTGLGEMASYLPVSGSFETYANRYVDKSLGFALGWNYWFNWAITVAAELVAGALIMKYWFPDVPAAIWSGLFLIILFVLNYLSTRSYGESEFIFAGIKVLTVLVFLFAGTLLILGLGPEPSPGFTNWTIGEAPFVGGFTAMLGIFMVAGFSFQGTEMIGIAAGESEDPEKNVPRAVHSIFWRILIFYLGAFTVIGFLIPYTDPNLLNTNIENISISPFTLVFERFGLAAAASIMNAVILTAVLSAGNSGLYVSTRMLYAMAETGQAPKCFLKLNKRGVPSYALFATVVFGLAAFLTSLIGEGKAYDWLVNISGMAGFITWIGIAICHFRFRRAYVAQGKDLKDLPYKATWFPFGPLLALIMCIIVTAGQNYSAFTGAEIDWYGASVAYIGIPVFLAVFFYHKIKHKTHLIPLKEVNLSRDK
>NZ_CP027569.1|WP_014016549.1|2447902_2448172_-|chorismate-mutase
MDLEECRREIDVLDRDLTKILERRMQVVAEVAAYKKEHHMEIYDPRRERQVLDKIANLTVQKELSPYLRRIYQCIMDESKKYEREHMGL
>NZ_CP027569.1|WP_014016550.1|2445740_2447906_-|ATP-dependent-RecD-like-DNA-helicase
MKMEQIVVRGIAERLLFEAPDSDYRVFRLHDEADDATYTVTGHGTKPLVGDRLEIKGHWVQHKRYGRQFAADGWSRIIPESVDGIERFLGSGAVKGLGPALAHRVVAAFGKDTMKILERDPQRLLEVEGIGPKKLAVITESFYEEKQVNDIAYDLEQHGVAGRYAGRLLQKYGDDVHYVLTEEPYRMIAEIDGIGFKTADQMALAYGMDRQDPQRLSAGLTYVLQTMTQNGHVCIPDAELVRRAAFILQADALGLHDILKEAIEVGQLCTADFQGTVYVYTPEAYEEENYIARRIQDMAAMKPLPMKTHVQLFLDRWQDSCHFELADKQREAVEKSLESGMTVITGGPGTGKTTVVQTIIRLAEQEGLRILLCAPTGRAAKRLAETTQRKAKTIHRLLIPDGRQGRIQVFEYNETKLLPADLVIVDEVSMLDMEMMYHLLSALKPQCRCILVGDADQLPSVGAGAVLHDIIASGQVPVVRLDTIFRQQEGGRIVTNAHLINSGRLPVVNEDPEFRFVEIEDEAQGAEKISALYNSELLETGDKFAVQVLSPMYKNPCGVDNLNQLIQGRFNPPAEGKGELKGKNVIFRVGDKVMQKHNDYEKGVFNGDIGEIFAIQKDMVYVRYPEQDVKYEGQEVDEITLAYAITVHKSQGSEYHTVIMVLVNSHAIMLQRNLFYTAVTRAKRKVILVGSKRAVQTAVQNQRTSRRFTLLIPRLQGELIV
>NZ_CP027569.1|WP_027895181.1|2445080_2445728_-|ComF-family-protein
MSLITHLFNLLYPPRCPACGALVARDGDWCPSCLAAVWHPRRINKPAAVRHLAACYCLADYRGAMRHILHDIKYNGKQGKCRACRVLLDRFPWQERFDRIDRVVPVPLAPEKLQRRGFNQAEALFRDWASVRWDWCDALQRLRPTKVQWQLCRDERKENVHDAFAVKETVPVQGKHILLVDDIFTTGATLEACAQALTKKGATSVTGLVIASGAP
>NZ_CP027569.1|WP_027895182.1|2443424_2444297_+|LysR-family-transcriptional-regulator
MDIRQLTYFMVIAEEGQITAAARRLHMAQPPLSQQMKALEEELGVQLLQREPRSVTLTDAGEILYRRARQIVTLTDSTRREIADFKNGLRGTLSIGTVSSSGSVILQPALRQFHDDHRGIRFEIYDGNTFRVLDMLRKGLIEIGIVRTPFKQDAFDCTLLPEEPMVLAYTESLADPNPGQPSMTIEQLQGLPLILYRRFDQLFHDVCEAHNLTPNLLCRNDDARTTLLWAETGLGYAVVPASAISPASRPQLKTKAIDEPRLRTQLAVITPKHRYLSSIARQFIDALTKA
>NZ_CP027569.1|WP_022497430.1|2442722_2443298_-|chromate-transporter
MNEIVTPKRDAHFFWTLFKSTFLISAFTVGGGFVIIPLLKGKYVDEYHWINDKDTLDMVAIAQSMPGVIAVNSAVILGYRMAGVLGTLVALVATVLPCLITLSIISYCYDFFIQNLYIKMILRGMQCGATALIVNVGIDLLIKQGKKRLLLPLAIIVATFIANLCFDVNIMVLIIIDGIIGFAFMRDKKYD
>NZ_CP027569.1|WP_027895183.1|2442140_2442707_-|chromate-transporter
MIYALLFWEFCKVGAFCVGGGYASMPLIQASVVDTFHWLSMSEFVDIFTISQMTPGPIGINAATFVGTKIAGLGGAVAATLGFVTPSFFLGIILARVFLKYGDIGPIRGILNGLRPAVVALICVASLSFILLALWNTETLPDDWSAFSLGGLAILILAIAATRRKIGVIKVLIGSGVLGLVLGIAGLI
>NZ_CP027569.1|WP_106669715.1|2454269_2455385_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MIVNKAYRYRIYPTTAQKIMFAKTFGCVRFIYNKMLSDRIDYYKETGQKLNNTPAQYKEDFPWLKEVDSLALANAQLNLNKAYSHFWNDSQHFGKPRFKSKKNSRASYSTNNQKGSVRIEGHKVKLPKVGWVKLCQHRPLPENSIIKTVTISKTPSGKYYISMLVEYENQVLPVIPKTFLGLDFAMHGLYVASDEEDAKYPDFLRKAEKRLAKAQQKLSKKQKGSHNREKQRLRVAILHEKVANQRRDFLHKKSRYLADRYDAIGIEDISVKAMAKRKKGGKFSFGKSVADNGWNLFTNMLEYKLAWQGKQLIKIDKWYPSSQLCHVCGYRTSETKDLSVREWNCPKCGSHHDRDKNAAINIREEARRISA
>NZ_CP027569.1|WP_027895021.1|2455964_2457200_+|membrane-protein
MANISSIKAASLSMCFSVGAVLFSSHAGGGFATGNQENVYFVSLGWLGPITAIITMLLFTLTIKEAMNMYNSRHLTSYRQLFQNLYSPFKGIEYLFEAFFYIMVLMAVSATISGAASAINAQTGLNYYAGIGIVGTIIFFLTIFGAGLVRRATTYMGMAILAMVIMIFSVGIYMGGSIEGTQFFTAAMAQDFTTNGFSKVPTAILHAFTYSGFQCVVIPTMIVVGTPLVTRKNCATSMWFSFAMNAIALTLAVCMLLGWTGIYGKSPLPTLTSCKAMGMSWLTIAYSAFLLLCLISTGVTTVFGFTARFSETKCLKKISRNTVTRSAIVTLFIISASMTVSVAGLTNIIKYGYGYCGYLAIAIIIVPFLTIGRYKNKRYAADSEYRARIDAMNENPEAAQAFQPTAEAAGH
>NZ_CP027569.1|WP_027895022.1|2457479_2458781_-|phosphomethylpyrimidine-synthase-ThiC
MDYTTQMDAARKGIVTPQMKIVAEKEHMPVEKLMALVASGKVAIPANKVHISLSPEAVGQDCRTKINVNLGVSPEHNNHEEELQKVQNAIDMKAEAIMDLSNFGKTREFRRKLVKMSTAMIGTVPMYDAVGMLEKDLKDITVDEFFSVVEQHAEDGVDFMTIHCGMNRKTAQRIKDNPRLTNVVSRGGSLLFAWMEMNNQENPFYEYYDRLLDICEKYDVTLSLGDACRPGCTHDATDAAQIEELITLGELTKRAWAHNVQVMIEGPGHMVLNEIAANMKIEKRLCHGAPFYVLGPLVTDIAPGYDHITSAIGGAIAASCGADFLCYVTPAEHLRLPTVDDVKEGIIAARIAAHAADLVKGIPGAQEWDDAMSKARVDVDFDKMISLSIDPEKARRYYESSKPECEGTCTMCGKMCPARTMKRILAGEDVSIR
>NZ_CP027569.1|WP_027895023.1|2459110_2459833_+|SIMPL-domain-containing-protein
MKYKPLKGLVVAAMLASSLVLAAPQSLAAGPEPSVVTVTGYAQQEVAPDTAYVTIGTTSTDADAQQARTKNNLAMNEVTNALKAMGIPAENMKTTGFYMSPNYDMKGQKVTSYTVSNNLEVKLTDLTMVSQVINKAGSLGANQINNVRFTNEHADQIKENLIKEAVHNGQRAAQAAAEAAGSQLGAVKEINISGTSPSYNRVYAAGMSLRAVKMEAADSTPVEAGTNTLSQSVNLTYYLQ
>NZ_CP027569.1|WP_014016541.1|2460016_2460889_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MKEYTPFKSGKVREVYDAGDSIIMVATDRISAFDHILKNKITKKGAILTQMSKFWFDMTSDIIPNHMISVDNADMPEFFQQEQFVGNSMKCQKLTMIPMECIVRGYITGSGWESYQKDGTVCGIKLPAGLKESEKLPEPIFTPSTKAELGDHDENVSLEEGAAFIDKTFPGKGKEYAEKIRDYTLALYKKCAEYALSKGIIIADTKFEFGLDDKGNIVLGDEMLTPDSSRFWPLEGYKAGQSQPSYDKQFVRDWLKANPDSDYLLPQDVIDKTIAKYKEAYEMLTGKAFD
>NZ_CP027569.1|WP_027895024.1|2460955_2462020_-|ABC-transporter-substrate-binding-protein
MKYIRLILLGLCCILALSGCGFWESEEDGDNVVYVYNWGDYVDPDTLKQFEEETGIRVVMDEFDTNESMYPLVAAGAERYDVICPSDYMIQKMIHNDLLQPLDYSQLPNARQYVGKQFWTQSESFDPGNRYAVPYCWGTVGIVYNRTMVDEPVDSWSILWKEKYKNDIIMQDSPRDSFMVALKRLGYSLNTTDPQQIQEAREMLIAQKPLVQAYGIDDVKDKLVSGEAAMGVVFSGEALRMILENRDLEYVIPKEGTNLWIDSWVIPKNAEHIENAHKFIDFMSRPDIALKNFEYLTYSTPNTAVPDMEEDEDYKDNPVVFPPEEAYAGQETYKYLGEEGDKRYNDEWIQVKVW
>NZ_CP027569.1|WP_022497815.1|2462030_2462810_-|ABC-transporter-permease
MEKVKKLYVALVVLFLYAPIGVLVAQSFNASRYRGHWTGFTLQWYGELFQNEGILDALQNTVTIGLSSAAIATVLGLITCMALRGMGRKPRSVFLGVASMPLLNADIVTGISLMLLFLGMGLRLGYGSILMAHVVFNLPYVILCIMPQFLSLDRSCYDAARDLGATPFVAFRRVVLPELRPSLLAGFMLAFTMSADDFIITHFTKGAGIDTLPTKIYAELKLGIHPEMYALSTLVFVFVLVFAVLLIVNRKRLTLGRNW
>NZ_CP027569.1|WP_027895025.1|2462809_2463637_-|ABC-transporter-permease
MINSAAIRNLFAAPFLIWAVLFIFCPVVAIAWYGLTDAQGAMTLANISLMTHWEYLKALELSIVLALISTVICLIVAYPLCLILTEKKRGKGSLLFLLFILPMWMNSLLTTMAWQTILEKNGILNQFLRLLSLPDVSLINTPAAIVIGMIYNFLPYMVLPLYVALSKINGNVIAAAHDLGASSWQTFTKVILPLSLPGAISGITMVFIPSLTTFFISGLLGGNKILLIGNIVEQEFTMAYDWHLGSGLSLVLMVFIVINMAVTAYFDRSEGQVKK
>NZ_CP027569.1|WP_027895026.1|2463629_2464700_-|ABC-transporter-ATP-binding-protein
MEKELIHLEHVSKTYDGHKVLDGLDLAISENEFVTLLGPSGCGKTTTLRLIAGFETPDEGRILFEGADITQLPPNRRQVNTVFQNYSLFSHMDVAENIAFGPKIHGKSRDYIRDKIRYALKLVNLDGYEHANIVDLSGGQQQRVAIARAVVNEPRVLLLDEPLSALDRKLRRSMQLELIKIKEELGITFVFVTHDQEEALSMSDTVVVMNQGYIQQIGTPENIYNEPENAFVADFIGDSNIVDGLMVHDKLVRIADYDFDCVDVGFGTNRPVDVQIRPEDMELRPPQDGGFNGVVTKTIFEGMTYNFTIQARGIEWLVKSTKHYQPGDEVSLWVDPFNIQIMNKPESEDERAMEND
>NZ_CP027569.1|WP_106669728.1|2464781_2465540_-|lytic-transglycosylase-domain-containing-protein
MAAFLLAVMALAPVQAITQEEMVYDQVSKYIRGSEAAAIAQDICDASYMYDVDPILVTAVFTTESHFDNSAVSGVGAVGIAQLMPATAASLNVNPYNRRENIFGGVKYLGQMVERYRTWDKPFVYAEAAYNAGPGAVDRARGVPHYTETMNYVQTVEQTRREIWRLAGHEAMAMQPYKRSAMTMQEKEAPIFPSLKEWHEQHSQKAAQVQAKSVGSTKPALVRTKAARVAPERPRPSYWTTSLPWGEGTRRK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027569_11	11.5\|2452559\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	2452559-2452592	34	NZ_AP019010	Serratia marcescens strain AS-1 plasmid pSERAS01, complete sequence	79207-79240	6	0.824
NZ_CP027569_11	11.5\|2452559\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	2452559-2452592	34	NZ_CP041128	Serratia marcescens strain WVU-005 plasmid pWVU-005-2, complete sequence	12518-12551	6	0.824
NZ_CP027569_11	11.5\|2452559\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	2452559-2452592	34	NZ_CP013047	Serratia marcescens strain B3R3 plasmid unnamed1, complete sequence	72997-73030	6	0.824
NZ_CP027569_6	6.18\|1629224\|33\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1629224-1629256	33	MH700630	Sinorhizobium phage phiM6, complete genome	23781-23813	7	0.788
NZ_CP027569_11	11.5\|2452559\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	2452559-2452592	34	NZ_CP018920	Serratia marcescens strain UMH7 plasmid unnamed3, complete sequence	71265-71298	7	0.794
NZ_CP027569_3	3.14\|1600930\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600930-1600963	34	NZ_LR723669	Rhizobium sp. Khangiran2 plasmid 2	70923-70956	8	0.765
NZ_CP027569_3	3.14\|1600930\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600930-1600963	34	LR606151	Rhizobium sp. Q54 genome assembly, plasmid: 8	120891-120924	8	0.765
NZ_CP027569_9	9.21\|2002487\|35\|NZ_CP027569\|CRISPRCasFinder,CRT	2002487-2002521	35	NZ_CP013927	Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence	35411-35445	8	0.771
NZ_CP027569_11	11.16\|2453299\|35\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	2453299-2453333	35	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	417915-417949	8	0.771
NZ_CP027569_3	3.5\|1600276\|35\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600276-1600310	35	MT446415	UNVERIFIED: Escherichia virus TH44, complete genome	50038-50072	9	0.743
NZ_CP027569_3	3.16\|1601073\|32\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1601073-1601104	32	NZ_CP014052	Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence	166692-166723	9	0.719
NZ_CP027569_4	4.8\|1603753\|37\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1603753-1603789	37	NC_019919	Yersinia phage phiR201 complete genome	34972-35008	9	0.757
NZ_CP027569_4	4.17\|1604439\|36\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1604439-1604474	36	MN693492	Marine virus AFVG_25M361, complete genome	4917-4952	10	0.722
NZ_CP027569_6	6.18\|1629224\|33\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1629224-1629256	33	NZ_LT598665	Enterococcus faecium isolate Ef_aus00233 plasmid 3	78263-78295	10	0.697
NZ_CP027569_9	9.10\|2002485\|37\|NZ_CP027569\|PILER-CR	2002485-2002521	37	NZ_CP013927	Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence	35411-35447	10	0.73
NZ_CP027569_11	11.2\|2452357\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	2452357-2452390	34	LC168164	Tenacibaculum phage pT24 DNA, complete genome	3427-3460	10	0.706
NZ_CP027569_3	3.13\|1600861\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600861-1600894	34	NZ_CP014451	Enterococcus faecium strain ATCC 700221 plasmid unnamed2, complete sequence	11516-11549	11	0.676
NZ_CP027569_3	3.13\|1600861\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600861-1600894	34	NZ_LR135299	Enterococcus faecium isolate E7429 plasmid 3	27362-27395	11	0.676
NZ_CP027569_3	3.13\|1600861\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600861-1600894	34	NZ_LR135341	Enterococcus faecium isolate E7356 plasmid 3	45093-45126	11	0.676
NZ_CP027569_3	3.13\|1600861\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600861-1600894	34	NZ_CP041255	Enterococcus faecium strain 515 plasmid p32, complete sequence	39004-39037	11	0.676
NZ_CP027569_3	3.13\|1600861\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600861-1600894	34	NC_011364	Enterococcus faecium plasmid pMG1, complete sequence	42208-42241	11	0.676
NZ_CP027569_3	3.13\|1600861\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600861-1600894	34	NZ_CP014535	Enterococcus faecium strain E745 plasmid pl6, complete sequence	43719-43752	11	0.676
NZ_CP027569_3	3.13\|1600861\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600861-1600894	34	NZ_CP019972	Enterococcus faecium isolate 2014-VREF-114 plasmid p114-2 sequence	53947-53980	11	0.676
NZ_CP027569_3	3.13\|1600861\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1600861-1600894	34	NZ_CP018130	Enterococcus faecium strain A_020709_82 plasmid unnamed2, complete sequence	52653-52686	11	0.676
NZ_CP027569_6	6.1\|1627989\|34\|NZ_CP027569\|PILER-CR,CRISPRCasFinder,CRT	1627989-1628022	34	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	102541-102574	11	0.676

1. spacer 11.5|2452559|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019010 (Serratia marcescens strain AS-1 plasmid pSERAS01, complete sequence) position: , mismatch: 6, identity: 0.824

---gctgacacaaccggcacagattggcgatatgctc	CRISPR spacer
cgggcagac---accggcacagattggcgatttgctg	Protospacer
   ** ***   ******************* ****

2. spacer 11.5|2452559|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041128 (Serratia marcescens strain WVU-005 plasmid pWVU-005-2, complete sequence) position: , mismatch: 6, identity: 0.824

---gctgacacaaccggcacagattggcgatatgctc	CRISPR spacer
cgggcagac---accggcacagattggcgatttgctg	Protospacer
   ** ***   ******************* ****

3. spacer 11.5|2452559|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013047 (Serratia marcescens strain B3R3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

---gctgacacaaccggcacagattggcgatatgctc	CRISPR spacer
cgggcagac---accggcacagattggcgatttgctg	Protospacer
   ** ***   ******************* ****

4. spacer 6.18|1629224|33|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to MH700630 (Sinorhizobium phage phiM6, complete genome) position: , mismatch: 7, identity: 0.788

cctgtac-gaacaggatagaattaaaaaagaaat	CRISPR spacer
-tagtgctgaacaggatagacttaacaaagaaac	Protospacer
 . **.* ************ **** *******.

5. spacer 11.5|2452559|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018920 (Serratia marcescens strain UMH7 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.794

---gctgacacaaccggcacagattggcgatatgctc	CRISPR spacer
cgggcagac---accggcacagatcggcgatctgctg	Protospacer
   ** ***   ************.****** ****

6. spacer 3.14|1600930|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR723669 (Rhizobium sp. Khangiran2 plasmid 2) position: , mismatch: 8, identity: 0.765

aaccgtatcctttatcctgttttccttcccaggc	CRISPR spacer
ctccgcatcctttatcctgttttcctgcggcgcc	Protospacer
  ***.******************** *   * *

7. spacer 3.14|1600930|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to LR606151 (Rhizobium sp. Q54 genome assembly, plasmid: 8) position: , mismatch: 8, identity: 0.765

aaccgtatcctttatcctgttttccttcccaggc	CRISPR spacer
ttccgcatccttcatcctgttttcctgcggagcc	Protospacer
  ***.******.************* *  ** *

8. spacer 9.21|2002487|35|NZ_CP027569|CRISPRCasFinder,CRT matches to NZ_CP013927 (Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence) position: , mismatch: 8, identity: 0.771

gtccataaataagccccccttaaaactgacttgat	CRISPR spacer
ggtatttcataagccccccttaaaattggcttgat	Protospacer
* .  *  *****************.**.******

9. spacer 11.16|2453299|35|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 8, identity: 0.771

ctatcagccttccgtttggcttccgggtcgccata	CRISPR spacer
ctcccacccgtccgtttggcttccgggtctgccca	Protospacer
** .** ** *******************  * .*

10. spacer 3.5|1600276|35|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to MT446415 (UNVERIFIED: Escherichia virus TH44, complete genome) position: , mismatch: 9, identity: 0.743

ttagttactaatgctaacgatgatgaccaggaggg	CRISPR spacer
caacttattaatgcgaacgatgatgaccatttggt	Protospacer
. * ***.****** **************   **

11. spacer 3.16|1601073|32|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014052 (Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

acagattcgagttctttaaacataatagcctc	CRISPR spacer
ttttactcgggttctttaaacatattagccat	Protospacer
 .  *.***.************** ***** .

12. spacer 4.8|1603753|37|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NC_019919 (Yersinia phage phiR201 complete genome) position: , mismatch: 9, identity: 0.757

atcctgttcaaataattcttgttctgtcatgttaatc	CRISPR spacer
cttacgttcatttaattcttgttctgtcatgttgctt	Protospacer
 *. .*****  *********************. *.

13. spacer 4.17|1604439|36|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to MN693492 (Marine virus AFVG_25M361, complete genome) position: , mismatch: 10, identity: 0.722

acctgtgattttaaacatactgatctccttatctcc	CRISPR spacer
tcctgagattttaaacatacttatctcttcagaaga	Protospacer
 **** *************** *****.*.*

14. spacer 6.18|1629224|33|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT598665 (Enterococcus faecium isolate Ef_aus00233 plasmid 3) position: , mismatch: 10, identity: 0.697

cctgtacgaacaggatagaattaaaaaagaaat	CRISPR spacer
taagcgacaactagatagaattaaaaaagaaag	Protospacer
.  *..  *** .*******************

15. spacer 9.10|2002485|37|NZ_CP027569|PILER-CR matches to NZ_CP013927 (Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence) position: , mismatch: 10, identity: 0.73

atgtccataaataagccccccttaaaactgacttgat	CRISPR spacer
gcggtatttcataagccccccttaaaattggcttgat	Protospacer
..* .  *  *****************.**.******

16. spacer 11.2|2452357|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to LC168164 (Tenacibaculum phage pT24 DNA, complete genome) position: , mismatch: 10, identity: 0.706

gggtattctaccccaaaatgctttagactggttt	CRISPR spacer
aggtattctaaccaaaaatgctttataagtataa	Protospacer
.********* ** *********** *   .*

17. spacer 3.13|1600861|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014451 (Enterococcus faecium strain ATCC 700221 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

cttctggcaatttgtagatgatattttcagactt	CRISPR spacer
acttcaaaaatttgtagattatatttccagacaa	Protospacer
 .*.... *********** ******.*****

18. spacer 3.13|1600861|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135299 (Enterococcus faecium isolate E7429 plasmid 3) position: , mismatch: 11, identity: 0.676

cttctggcaatttgtagatgatattttcagactt	CRISPR spacer
acttcaaaaatttgtagattatatttccagacaa	Protospacer
 .*.... *********** ******.*****

19. spacer 3.13|1600861|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135341 (Enterococcus faecium isolate E7356 plasmid 3) position: , mismatch: 11, identity: 0.676

cttctggcaatttgtagatgatattttcagactt	CRISPR spacer
acttcaaaaatttgtagattatatttccagacaa	Protospacer
 .*.... *********** ******.*****

20. spacer 3.13|1600861|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041255 (Enterococcus faecium strain 515 plasmid p32, complete sequence) position: , mismatch: 11, identity: 0.676

cttctggcaatttgtagatgatattttcagactt	CRISPR spacer
acttcaaaaatttgtagattatatttccagacaa	Protospacer
 .*.... *********** ******.*****

21. spacer 3.13|1600861|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NC_011364 (Enterococcus faecium plasmid pMG1, complete sequence) position: , mismatch: 11, identity: 0.676

cttctggcaatttgtagatgatattttcagactt	CRISPR spacer
acttcaaaaatttgtagattatatttccagacaa	Protospacer
 .*.... *********** ******.*****

22. spacer 3.13|1600861|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014535 (Enterococcus faecium strain E745 plasmid pl6, complete sequence) position: , mismatch: 11, identity: 0.676

cttctggcaatttgtagatgatattttcagactt	CRISPR spacer
acttcaaaaatttgtagattatatttccagacaa	Protospacer
 .*.... *********** ******.*****

23. spacer 3.13|1600861|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019972 (Enterococcus faecium isolate 2014-VREF-114 plasmid p114-2 sequence) position: , mismatch: 11, identity: 0.676

cttctggcaatttgtagatgatattttcagactt	CRISPR spacer
acttcaaaaatttgtagattatatttccagacaa	Protospacer
 .*.... *********** ******.*****

24. spacer 3.13|1600861|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018130 (Enterococcus faecium strain A_020709_82 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

cttctggcaatttgtagatgatattttcagactt	CRISPR spacer
acttcaaaaatttgtagattatatttccagacaa	Protospacer
 .*.... *********** ******.*****

25. spacer 6.1|1627989|34|NZ_CP027569|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

tatacccatagtcaaaatcgccatgtgaaaaaga	CRISPR spacer
caaccccatggtcaagatcgccatgtgaccggtc	Protospacer
.*  *****.*****.************  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

221692 : 279561

Bacillus_virus(16.67%)

plate,transposase,tRNA,integrase,holin

attL 222636:222651|attR 285880:285895

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027895324.1\|221692_222949_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	1.5e-56	34.7
222636:222651	attL	NA	NA	NA	NA
WP_027895325.1\|223365_224049_-	DUF2249 domain-containing protein	NA	NA	NA	NA
WP_027895326.1\|224255_225665_-	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_051524976.1\|225774_226596_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_027895328.1\|226783_227335_-	flavin reductase family protein	NA	NA	NA	NA
WP_051524977.1\|227693_228197_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_027895330.1\|228325_228604_+	hypothetical protein	NA	NA	NA	NA
WP_036220577.1\|228714_229185_-	hypothetical protein	NA	NA	NA	NA
WP_051524978.1\|230034_234354_+	EAL domain-containing protein	NA	NA	NA	NA
WP_027895332.1\|234668_234863_-	hypothetical protein	NA	NA	NA	NA
WP_027895333.1\|235191_235557_-	hypothetical protein	NA	NA	NA	NA
WP_027895334.1\|235582_236539_-	AEC family transporter	NA	NA	NA	NA
WP_027895335.1\|236542_237106_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	1.1e-46	52.6
WP_027895336.1\|237123_237729_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_036220582.1\|238008_238278_-	hypothetical protein	NA	NA	NA	NA
WP_014016246.1\|238284_239241_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_027895337.1\|239644_240295_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_027895338.1\|240540_241767_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	3.1e-110	53.7
WP_158698416.1\|241996_242143_+	hypothetical protein	NA	NA	NA	NA
WP_080712304.1\|242525_244514_-	hypothetical protein	NA	NA	NA	NA
WP_027895339.1\|247868_248318_-	DUF296 domain-containing protein	NA	NA	NA	NA
WP_027895340.1\|249348_252222_+	EAL domain-containing protein	NA	NA	NA	NA
WP_027895341.1\|252441_253977_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_022498026.1\|254086_254569_-	CBS domain-containing protein	NA	NA	NA	NA
WP_014016231.1\|254585_255056_-	CBS domain-containing protein	NA	NA	NA	NA
WP_022498027.1\|255245_255632_-	RidA family protein	NA	NA	NA	NA
WP_027895342.1\|255711_257121_-	amino acid permease	NA	NA	NA	NA
WP_027895343.1\|257134_258355_-	threonine ammonia-lyase	NA	NA	NA	NA
WP_036220583.1\|259052_260156_-	MFS transporter	NA	NA	NA	NA
WP_106669691.1\|260282_261509_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	5.1e-113	55.0
WP_155266582.1\|261621_261768_+	hypothetical protein	NA	NA	NA	NA
WP_014016224.1\|261807_263439_-	chaperonin GroEL	A0A240F779	uncultured_virus	4.3e-160	56.8
WP_014016223.1\|263489_263771_-	co-chaperone GroES	A0A221S4A8	uncultured_virus	5.3e-18	43.5
WP_014016222.1\|263907_264498_-	response regulator	NA	NA	NA	NA
WP_022497769.1\|264501_265914_-	ATPase	NA	NA	NA	NA
WP_027895873.1\|265941_266952_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.1e-68	41.5
WP_014016219.1\|266966_267440_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_014016218.1\|267430_268141_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_027895872.1\|268124_268595_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_080712327.1\|268607_269585_-	thiamine-phosphate kinase	NA	NA	NA	NA
WP_014016215.1\|269600_270008_-	hypothetical protein	NA	NA	NA	NA
WP_027895870.1\|270468_271971_-	hypothetical protein	NA	NA	NA	NA
WP_036220914.1\|272420_272603_-	hypothetical protein	NA	NA	NA	NA
WP_027895868.1\|272989_273274_-	hypothetical protein	NA	NA	NA	NA
WP_027895867.1\|273308_273857_-	N-acetylmuramoyl-L-alanine amidase	A0A067ZJB6	Vibrio_phage	4.3e-11	36.5
WP_027895866.1\|273853_274300_-\|holin	phage holin family protein	D2XPZ9	Bacillus_virus	3.7e-21	43.3
WP_027895865.1\|274445_274919_-	hypothetical protein	NA	NA	NA	NA
WP_027895864.1\|274971_276012_+\|integrase	site-specific integrase	A0A0E3Y5J2	Fusobacterium_phage	1.2e-43	32.0
WP_106669692.1\|276868_277855_-	hypothetical protein	NA	NA	NA	NA
WP_051525010.1\|277820_278495_-	DUF2313 domain-containing protein	A0A2H4J717	uncultured_Caudovirales_phage	2.7e-15	34.2
WP_036220894.1\|278487_279561_-\|plate	baseplate J/gp47 family protein	A0A0A7RUN3	Clostridium_phage	1.6e-49	35.5
285880:285895	attR	NA	NA	NA	NA

DBSCAN-SWA_2

282720 : 325638

Clostridium_phage(29.41%)

portal,capsid,terminase,tail,tRNA,head,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027895859.1\|282720_285255_-\|tail	phage tail tape measure protein	A0A2I6PER7	Staphylococcus_phage	2.5e-50	32.4
WP_027895858.1\|285435_285849_-	hypothetical protein	NA	NA	NA	NA
WP_027895857.1\|285863_286298_-\|tail	phage tail tube protein	A0A0A7RVT1	Clostridium_phage	6.8e-28	45.9
WP_027895856.1\|286309_287455_-	hypothetical protein	A0A1V0DZX4	Clostridioides_phage	2.2e-49	33.9
WP_027895855.1\|287485_287950_-	hypothetical protein	NA	NA	NA	NA
WP_036220887.1\|287946_288342_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_036220884.1\|288331_288688_-\|head	phage head closure protein	NA	NA	NA	NA
WP_027895854.1\|288692_288968_-\|head,tail	phage gp6-like head-tail connector protein	H0USW7	Bacillus_phage	6.0e-06	34.4
WP_027895853.1\|288977_290105_-\|capsid	phage major capsid protein	A0A2I7SBY4	Paenibacillus_phage	3.1e-24	30.3
WP_027895852.1\|290101_290851_-\|protease	Clp protease ClpP	A0A0A7RTN2	Clostridium_phage	1.9e-33	42.0
WP_051525013.1\|290847_292065_-\|portal	phage portal protein	A0A0A7S1E7	Clostridium_phage	1.1e-83	45.0
WP_036220880.1\|292079_293825_-\|terminase	terminase large subunit	A0A0A7RVS5	Clostridium_phage	6.9e-156	49.8
WP_027895850.1\|293827_294295_-\|terminase	phage terminase small subunit P27 family	A0A2H4JH50	uncultured_Caudovirales_phage	5.4e-15	32.7
WP_158698418.1\|294372_294627_-	hypothetical protein	NA	NA	NA	NA
WP_027895849.1\|294969_295422_-	hypothetical protein	NA	NA	NA	NA
WP_072023510.1\|295532_295718_-	hypothetical protein	NA	NA	NA	NA
WP_080712325.1\|295718_296009_-	hypothetical protein	A8AU00	Listeria_phage	8.0e-09	47.3
WP_051525006.1\|295998_296895_-	hypothetical protein	Q0SPI6	Clostridium_phage	7.1e-40	39.9
WP_027895848.1\|297061_297466_-	hypothetical protein	NA	NA	NA	NA
WP_027895847.1\|297462_297696_-	hypothetical protein	NA	NA	NA	NA
WP_027895846.1\|297700_298138_-	hypothetical protein	A0A2H4PFU2	Mycobacterium_phage	4.4e-43	57.1
WP_027895845.1\|298265_298562_-	hypothetical protein	NA	NA	NA	NA
WP_155266579.1\|298764_298935_-	hypothetical protein	NA	NA	NA	NA
WP_027895843.1\|299314_299551_-	hypothetical protein	NA	NA	NA	NA
WP_036220901.1\|299563_299860_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_027895841.1\|299920_300151_-	hypothetical protein	NA	NA	NA	NA
WP_027895840.1\|300749_300935_-	hypothetical protein	NA	NA	NA	NA
WP_027895839.1\|301068_301410_-	hypothetical protein	NA	NA	NA	NA
WP_027895838.1\|301514_301709_-	hypothetical protein	NA	NA	NA	NA
WP_106669693.1\|301726_301939_-	hypothetical protein	NA	NA	NA	NA
WP_158698419.1\|302029_302422_+	hypothetical protein	NA	NA	NA	NA
WP_106669695.1\|302669_302882_-	hypothetical protein	NA	NA	NA	NA
WP_106669696.1\|302964_303612_+	hypothetical protein	NA	NA	NA	NA
WP_027895837.1\|303931_304138_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_158698420.1\|304268_304622_+	helix-turn-helix domain-containing protein	A0A139ZPJ2	Marinitoga_camini_virus	1.4e-10	35.7
WP_027895836.1\|304664_305048_+	hypothetical protein	NA	NA	NA	NA
WP_027895835.1\|305173_306172_+	Abi family protein	A0A1Q1PVS3	Staphylococcus_phage	1.2e-30	32.4
WP_072023508.1\|306392_307925_+	recombinase family protein	A0A2K9V2Y5	Faecalibacterium_phage	2.5e-77	36.4
WP_027895550.1\|313721_315059_-	MFS transporter	NA	NA	NA	NA
WP_014016212.1\|315140_315656_-	transcription repressor NadR	NA	NA	NA	NA
WP_022497040.1\|315671_316184_-	hypothetical protein	NA	NA	NA	NA
WP_157868816.1\|316343_317504_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_027895551.1\|317741_318668_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_027895552.1\|318602_319514_-	hypothetical protein	NA	NA	NA	NA
WP_027895553.1\|319517_320102_-	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_027895554.1\|320267_321197_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.8e-36	35.0
WP_036205187.1\|321193_322429_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_027895555.1\|322480_323047_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_027895556.1\|323036_323453_-	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_027895557.1\|323498_324605_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	4.3e-87	46.9
WP_014016201.1\|324618_325638_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA

DBSCAN-SWA_3

1293156 : 1327477

Streptococcus_phage(33.33%)

integrase,protease,transposase

attL 1316542:1316570|attR 1335256:1335284

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027895404.1\|1293156_1295076_+\|protease	ATP-dependent protease, Lon family	A0A0R6PGP8	Moraxella_phage	1.3e-27	27.1
WP_014015701.1\|1295077_1296406_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	2.9e-106	46.2
WP_014015702.1\|1297219_1298407_+	elongation factor Tu	A0A2K9L516	Tupanvirus	1.8e-14	26.5
WP_027895403.1\|1298792_1299689_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_014015704.1\|1299971_1301492_+	L-lactate permease	NA	NA	NA	NA
WP_027895402.1\|1302169_1303723_+	propanoyl-CoA transferase Pct	NA	NA	NA	NA
WP_014015706.1\|1303719_1304634_+	VOC family protein	NA	NA	NA	NA
WP_014015707.1\|1304659_1305436_+	2-hydroxyglutaryl-CoA dehydratase	NA	NA	NA	NA
WP_027895401.1\|1305457_1306744_+	2-hydroxyacyl-CoA dehydratase	NA	NA	NA	NA
WP_027895400.1\|1306743_1307862_+	2-hydroxyacyl-CoA dehydratase	NA	NA	NA	NA
WP_106669705.1\|1308067_1309216_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_054335782.1\|1309493_1309949_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	2.1e-19	40.0
WP_027895699.1\|1310112_1311006_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_106669706.1\|1311156_1312383_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	2.3e-113	55.2
WP_027895698.1\|1312696_1314658_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.5e-100	35.3
WP_027895697.1\|1315150_1316473_+	MFS transporter	NA	NA	NA	NA
1316542:1316570	attL	NA	NA	NA	NA
WP_027895696.1\|1316746_1317187_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_027895695.1\|1317263_1317692_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_027895694.1\|1318000_1318648_+	cupin domain-containing protein	NA	NA	NA	NA
WP_027895693.1\|1318687_1320019_+	anaerobic nitric oxide reductase flavorubredoxin	NA	NA	NA	NA
WP_027895692.1\|1320774_1321251_+	hypothetical protein	NA	NA	NA	NA
WP_036203056.1\|1321403_1322519_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QMQ9	Streptococcus_phage	5.5e-90	48.4
WP_155266567.1\|1322661_1323045_+\|integrase	tyrosine-type recombinase/integrase	A0A0A8WIE1	Clostridium_phage	9.9e-07	34.9
WP_027895371.1\|1323142_1324999_-	APC family permease	NA	NA	NA	NA
WP_027895370.1\|1325806_1327036_+	iron hydrogenase	NA	NA	NA	NA
WP_072014509.1\|1327183_1327477_+\|transposase	transposase	S6AND0	Bacillus_phage	9.2e-21	53.0
1335256:1335284	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1640946 : 1695920

Bacteriophage(20.69%)

plate,portal,transposase,capsid,terminase,tail,integrase,protease

attL 1666915:1666929|attR 1691600:1691614

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_054335782.1\|1640946_1641402_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	2.1e-19	40.0
WP_027895432.1\|1641634_1642201_+	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_155266569.1\|1643709_1644960_+	hypothetical protein	NA	NA	NA	NA
WP_027895435.1\|1645059_1646019_+	WYL domain-containing transcriptional regulator	NA	NA	NA	NA
WP_027895436.1\|1646121_1647792_+	AAA family ATPase	NA	NA	NA	NA
WP_027895437.1\|1647887_1649417_+	methylmalonyl-CoA carboxyltransferase	NA	NA	NA	NA
WP_027895439.1\|1649950_1650358_+	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_027895440.1\|1650734_1651811_-\|integrase	site-specific integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	7.0e-42	32.8
WP_014016479.1\|1651917_1652100_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_027895441.1\|1652150_1652603_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_027895443.1\|1652908_1653946_-	hypothetical protein	A0A1S5SFA1	Streptococcus_phage	1.6e-27	30.4
WP_036220619.1\|1653973_1654186_-	hypothetical protein	NA	NA	NA	NA
WP_051524981.1\|1654206_1655019_-	hypothetical protein	A0A1W6JPJ7	Morganella_phage	7.6e-41	56.1
WP_158698422.1\|1655071_1655863_-	hypothetical protein	NA	NA	NA	NA
WP_155266571.1\|1655808_1655979_-	hypothetical protein	NA	NA	NA	NA
WP_051524982.1\|1656101_1656281_-	hypothetical protein	NA	NA	NA	NA
WP_027895446.1\|1656454_1656844_-	hypothetical protein	NA	NA	NA	NA
WP_155266572.1\|1656892_1657459_-	hypothetical protein	NA	NA	NA	NA
WP_027895448.1\|1657473_1658100_-	helix-turn-helix domain-containing protein	A0A2H4J2S9	uncultured_Caudovirales_phage	1.0e-24	34.1
WP_036220614.1\|1658256_1658442_+	helix-turn-helix transcriptional regulator	A8ASM2	Listeria_phage	1.1e-06	39.7
WP_027895449.1\|1658586_1659030_+	hypothetical protein	NA	NA	NA	NA
WP_027895450.1\|1659048_1659279_+	hypothetical protein	NA	NA	NA	NA
WP_027895451.1\|1659515_1660091_-	hypothetical protein	NA	NA	NA	NA
WP_051524983.1\|1660154_1660640_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_027895452.1\|1660707_1660971_+	hypothetical protein	NA	NA	NA	NA
WP_027895453.1\|1660986_1661268_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_027895455.1\|1661492_1661768_+	hypothetical protein	NA	NA	NA	NA
WP_014016036.1\|1661770_1661992_+	hypothetical protein	NA	NA	NA	NA
WP_027895456.1\|1662145_1662889_+	ParA family protein	H7BUL8	unidentified_phage	1.7e-23	33.8
WP_027895489.1\|1664173_1664722_+	hypothetical protein	NA	NA	NA	NA
WP_027895457.1\|1664733_1665171_+	hypothetical protein	NA	NA	NA	NA
WP_051524984.1\|1665410_1666208_+	hypothetical protein	I2E8X7	Clostridium_phage	1.5e-28	32.5
WP_027895458.1\|1666478_1666670_+	hypothetical protein	NA	NA	NA	NA
WP_027895459.1\|1666679_1666874_+	hypothetical protein	NA	NA	NA	NA
WP_027895460.1\|1666870_1667326_+	hypothetical protein	NA	NA	NA	NA
1666915:1666929	attL	NA	NA	NA	NA
WP_027895461.1\|1667322_1667766_+	hypothetical protein	NA	NA	NA	NA
WP_027895462.1\|1668282_1668801_+	hypothetical protein	A0A0C5AN04	Bacteriophage	1.0e-14	35.9
WP_027895463.1\|1668797_1670708_+\|terminase	terminase	A0A2K9V2Q8	Faecalibacterium_phage	2.1e-137	42.7
WP_014016048.1\|1670716_1670935_+	hypothetical protein	NA	NA	NA	NA
WP_027895464.1\|1670947_1672540_+\|portal	phage portal protein	A0A2K9V452	Faecalibacterium_phage	9.6e-104	40.3
WP_027895465.1\|1672529_1673600_+\|protease	Clp protease ClpP	A0A067ZG37	Vibrio_phage	4.4e-36	35.2
WP_027895466.1\|1673599_1673935_+	hypothetical protein	NA	NA	NA	NA
WP_027895467.1\|1673947_1675000_+\|capsid	phage capsid protein	A0A0K2FHW2	Achromobacter_phage	3.2e-07	25.2
WP_027895468.1\|1675011_1675254_+	hypothetical protein	NA	NA	NA	NA
WP_014016054.1\|1675250_1675577_+	hypothetical protein	A0A0C5AJ53	Bacteriophage	2.0e-08	35.6
WP_014016055.1\|1675585_1676101_+	hypothetical protein	A0A067ZG41	Vibrio_phage	6.2e-12	33.3
WP_014016056.1\|1676105_1676615_+	hypothetical protein	NA	NA	NA	NA
WP_014016057.1\|1676607_1676844_+	hypothetical protein	NA	NA	NA	NA
WP_027895469.1\|1676845_1678291_+\|tail	phage tail protein	A0A059WKP9	Vibrio_phage	4.7e-126	50.4
WP_020309999.1\|1678303_1678834_+\|tail	phage major tail tube protein	A0A2K9V323	Faecalibacterium_phage	6.8e-22	37.0
WP_027895470.1\|1678844_1679171_+	hypothetical protein	NA	NA	NA	NA
WP_155266573.1\|1679191_1679338_+	hypothetical protein	NA	NA	NA	NA
WP_036220628.1\|1679672_1681928_+\|tail	phage tail tape measure protein	D5LGY4	Escherichia_phage	1.8e-100	51.9
WP_027895471.1\|1681920_1682124_+\|tail	tail protein	A0A2K9V482	Faecalibacterium_phage	5.4e-12	51.6
WP_027895472.1\|1682128_1683295_+	phage regulatory protein	A0A0C5AJ59	Bacteriophage	2.1e-44	32.0
WP_027895473.1\|1683284_1683749_+\|plate	baseplate assembly protein	A0A067ZIM2	Vibrio_phage	6.8e-10	27.5
WP_014016065.1\|1683757_1684228_+\|tail	phage tail protein	A0A0C5AN08	Bacteriophage	7.1e-15	32.3
WP_027895474.1\|1684238_1684553_+	hypothetical protein	A0A067ZJ13	Vibrio_phage	8.6e-17	46.1
WP_027895475.1\|1684539_1685655_+\|plate	baseplate J/gp47 family protein	A0A0C5AEG2	Bacteriophage	1.8e-77	43.8
WP_027895476.1\|1685651_1686293_+\|tail	phage tail protein I	A0A2K9V471	Faecalibacterium_phage	1.1e-18	39.6
WP_027895477.1\|1686276_1686837_+	hypothetical protein	A0A0C5AEQ0	Bacteriophage	1.5e-16	40.4
WP_027895478.1\|1686845_1687172_+	hypothetical protein	NA	NA	NA	NA
WP_080712309.1\|1687184_1687997_+	hypothetical protein	J9PUL9	Bacillus_phage	2.9e-08	37.3
WP_051524985.1\|1688016_1688328_+	hypothetical protein	NA	NA	NA	NA
WP_051524986.1\|1688342_1688864_+	hypothetical protein	NA	NA	NA	NA
WP_027895481.1\|1689773_1689980_+	hypothetical protein	NA	NA	NA	NA
WP_027895482.1\|1690171_1691197_-\|integrase	tyrosine-type recombinase/integrase	A0A0E3Y5J2	Fusobacterium_phage	4.8e-40	32.0
WP_027895483.1\|1691235_1691673_+	hypothetical protein	NA	NA	NA	NA
1691600:1691614	attR	NA	NA	NA	NA
WP_155266574.1\|1691685_1691838_+	hypothetical protein	NA	NA	NA	NA
WP_027895484.1\|1691855_1692095_+	hypothetical protein	NA	NA	NA	NA
WP_027895485.1\|1692091_1692457_+	hypothetical protein	NA	NA	NA	NA
WP_027895486.1\|1692440_1693070_+	hypothetical protein	NA	NA	NA	NA
WP_027895487.1\|1693084_1693471_+	hypothetical protein	NA	NA	NA	NA
WP_027895488.1\|1693753_1694260_+	hypothetical protein	NA	NA	NA	NA
WP_051524987.1\|1694391_1694769_+	hypothetical protein	NA	NA	NA	NA
WP_036203056.1\|1694804_1695920_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QMQ9	Streptococcus_phage	5.5e-90	48.4

DBSCAN-SWA_5

1755000 : 1762231

Agrobacterium_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027895124.1\|1755000_1755597_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.1e-55	57.7
WP_014016142.1\|1755614_1756853_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.1e-143	61.5
WP_027895125.1\|1756925_1759259_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.3e-177	43.4
WP_014016144.1\|1759258_1759894_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_022497868.1\|1760111_1760483_+	thioredoxin	A0A2I2L415	Orpheovirus	2.1e-09	30.4
WP_022497869.1\|1760519_1761446_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	5.6e-56	39.7
WP_014016147.1\|1761487_1762231_+	hypothetical protein	A0A1S5SEZ8	Streptococcus_phage	9.5e-22	34.4

DBSCAN-SWA_6

2239300 : 2246078

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027894632.1\|2239300_2239729_-	ImmA/IrrE family metallo-endopeptidase	D2XR38	Bacillus_phage	1.2e-29	44.8
WP_027894631.1\|2239756_2240182_-	helix-turn-helix transcriptional regulator	Q0H244	Geobacillus_phage	3.2e-22	45.9
WP_036220316.1\|2240357_2240588_+	helix-turn-helix transcriptional regulator	A8ATX6	Listeria_phage	1.6e-12	52.4
WP_027894629.1\|2240794_2241175_-	hypothetical protein	NA	NA	NA	NA
WP_072023471.1\|2241451_2241823_-	DUF2513 domain-containing protein	NA	NA	NA	NA
WP_027894627.1\|2241890_2242070_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_027894626.1\|2242082_2242892_+	hypothetical protein	Q38330	Lactococcus_phage	6.8e-66	49.6
WP_027894625.1\|2242906_2243185_+	hypothetical protein	NA	NA	NA	NA
WP_051524930.1\|2243181_2243520_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_027894623.1\|2243605_2243890_+	hypothetical protein	NA	NA	NA	NA
WP_027894622.1\|2243891_2244881_+	DUF1351 domain-containing protein	NA	NA	NA	NA
WP_080712277.1\|2244901_2245528_+	ERF family protein	B6SBX8	Clostridium_virus	1.5e-39	66.9
WP_027894621.1\|2245529_2246078_+	hypothetical protein	F7V9C9	Lactobacillus_virus	5.5e-19	34.0

DBSCAN-SWA_7

2253988 : 2261992

Staphylococcus_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027894607.1\|2253988_2254399_+	hypothetical protein	A0A1W6JPZ1	Staphylococcus_phage	6.9e-06	33.6
WP_027894606.1\|2254401_2254911_+	hypothetical protein	NA	NA	NA	NA
WP_027894605.1\|2255097_2255373_+	hypothetical protein	NA	NA	NA	NA
WP_072023469.1\|2255365_2255848_+	DUF2829 domain-containing protein	H7BV51	unidentified_phage	1.3e-19	54.2
WP_080712270.1\|2255868_2256324_+	HNH endonuclease	A0A0F7IND1	Polaribacter_phage	5.4e-28	55.8
WP_027894603.1\|2256325_2256727_+	hypothetical protein	NA	NA	NA	NA
WP_155266555.1\|2256792_2256933_+	hypothetical protein	NA	NA	NA	NA
WP_051524925.1\|2256939_2257428_+	dCMP deaminase family protein	A0A222YXY3	Mycobacterium_phage	4.8e-22	45.3
WP_027894601.1\|2257399_2257855_+	hypothetical protein	NA	NA	NA	NA
WP_027894600.1\|2257910_2259023_+	hypothetical protein	A0A0A7S0B8	Clostridium_phage	1.5e-34	34.1
WP_027894598.1\|2259547_2259817_+	hypothetical protein	NA	NA	NA	NA
WP_027894597.1\|2259920_2260412_+	hypothetical protein	A5GYP7	Lactococcus_phage	3.8e-43	60.5
WP_027894596.1\|2260453_2261992_+	hypothetical protein	A0A1B1IRS4	uncultured_Mediterranean_phage	2.0e-29	37.1

DBSCAN-SWA_8

2435089 : 2442148

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014016575.1\|2435089_2435695_-	IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.0e-49	53.9
WP_027895185.1\|2435714_2436329_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.7e-24	35.3
WP_022497428.1\|2436321_2437386_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D8KLC2	Synechococcus_phage	9.3e-63	41.3
WP_014016572.1\|2437366_2438794_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.9e-59	34.0
WP_014016571.1\|2438838_2439333_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.5e-27	48.4
WP_036220526.1\|2439616_2442148_+	UvrD-helicase domain-containing protein	S5M596	Bacillus_phage	1.5e-21	23.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027569

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection