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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP049774 Mesoflavibacter sp. HG37 chromosome, complete genome 2 crisprs DEDDh,cas3,PrimPol 0 1 1 0

Results visualization

1. NZ_CP049774
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049774_1 1281910-1282101 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049774_2 2565337-2565707 Orphan NA
6 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP039706 Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence 754530-754560 6 0.806
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP033246 Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence 503540-503570 6 0.806
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP033248 Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence 503589-503619 6 0.806
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_AP019717 Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence 3441-3471 6 0.806
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP039703 Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence 750422-750452 6 0.806
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP013238 Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence 88418-88448 6 0.806
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 KJ018212 Shewanella sp. phage 1/41, complete genome 8131-8161 6 0.806
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 AP013757 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C27-MedDCM-OCT-S33-C188, *** SEQUENCING IN PROGRESS *** 2578-2608 6 0.806
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 MN694367 Marine virus AFVG_250M957, complete genome 4789-4819 7 0.774
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 MN693806 Marine virus AFVG_250M575, complete genome 21630-21660 7 0.774
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP009118 Borreliella valaisiana Tom4006 plasmid cp26, complete sequence 3313-3343 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP039728 Bacillus sp. S3 plasmid unnamed, complete sequence 6684-6714 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_LR214999 Mycoplasma conjunctivae strain NCTC10147 plasmid 3 32017-32047 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 LR214965 Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11 21608-21638 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 AP013712 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S31-C208, *** SEQUENCING IN PROGRESS *** 1054-1084 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP014851 Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence 49748-49778 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 NZ_CP053316 Bacillus circulans strain GN03 plasmid unnamed, complete sequence 95861-95891 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 MT773555 Myoviridae sp. isolate BML_3 genomic sequence 34080-34110 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 KC821622 Cellulophaga phage phi46:3, complete genome 16638-16668 8 0.742
NZ_CP049774_2 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder 2565417-2565447 31 KM873719 Flavobacterium phage FCL-2, complete genome 19084-19114 9 0.71

1. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 6, identity: 0.806

tgcatctaattctttttttgcaattacttct	CRISPR spacer
atcatctaattctttttttgaacttacattt	Protospacer
  ****************** * **** *.*

2. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 6, identity: 0.806

tgcatctaattctttttttgcaattacttct	CRISPR spacer
atcatctaattctttttttgaacttacattt	Protospacer
  ****************** * **** *.*

3. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 6, identity: 0.806

tgcatctaattctttttttgcaattacttct	CRISPR spacer
atcatctaattctttttttgaacttacattt	Protospacer
  ****************** * **** *.*

4. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 6, identity: 0.806

tgcatctaattctttttttgcaattacttct	CRISPR spacer
atcatctaattctttttttgaacttacattt	Protospacer
  ****************** * **** *.*

5. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 6, identity: 0.806

tgcatctaattctttttttgcaattacttct	CRISPR spacer
atcatctaattctttttttgaacttacattt	Protospacer
  ****************** * **** *.*

6. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 6, identity: 0.806

tgcatctaattctttttttgcaattacttct	CRISPR spacer
atcatctaattctttttttgaacttacattt	Protospacer
  ****************** * **** *.*

7. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to KJ018212 (Shewanella sp. phage 1/41, complete genome) position: , mismatch: 6, identity: 0.806

tgcatctaattctttttttgcaattacttct	CRISPR spacer
tggggttaattcttcttttgccattacttct	Protospacer
** . .********.****** *********

8. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to AP013757 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C27-MedDCM-OCT-S33-C188, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.806

tgcatctaattctttttttgcaattacttct	CRISPR spacer
tgcatctaaatctttttttgcattatgtact	Protospacer
********* ************ *   * **

9. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to MN694367 (Marine virus AFVG_250M957, complete genome) position: , mismatch: 7, identity: 0.774

tgcatctaattctttttttgcaattacttct	CRISPR spacer
agcatctgattctttttttgctatttgttta	Protospacer
 ******.************* ***  **. 

10. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to MN693806 (Marine virus AFVG_250M575, complete genome) position: , mismatch: 7, identity: 0.774

tgcatctaattctttttttgcaattacttct	CRISPR spacer
agcatctaattctctttttggaatacctcca	Protospacer
 ************.****** ***  **.* 

11. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP009118 (Borreliella valaisiana Tom4006 plasmid cp26, complete sequence) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
agaatctaaatgtttttttgcaattacaatc	Protospacer
 * ****** * ***************  ..

12. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP039728 (Bacillus sp. S3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
cttcttcatttcttttttagcaattacttct	Protospacer
. . *..* ********* ************

13. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
agttgctaattctttttttgccattccttgg	Protospacer
 *.  **************** *** ***  

14. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
agttgctaattctttttttgccattccttgg	Protospacer
 *.  **************** *** ***  

15. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to AP013712 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S31-C208, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
tgtatctaattctttgtttgcaaacgcaatt	Protospacer
**.************ ******* ..*  .*

16. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP014851 (Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
tgcatctaatgcttttttagcaacaaaaatt	Protospacer
********** ******* ****. *   .*

17. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to NZ_CP053316 (Bacillus circulans strain GN03 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
tgcttctaattcttttttggcaacatttaat	Protospacer
*** ************** ****.  .*  *

18. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
ttgtgctaattcttttgttgcaaatactcca	Protospacer
*    *********** ****** ****.* 

19. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to KC821622 (Cellulophaga phage phi46:3, complete genome) position: , mismatch: 8, identity: 0.742

tgcatctaattctttttttgcaattacttct	CRISPR spacer
tttctttaattctattttcgcaattacttaa	Protospacer
* . *.******* ****.**********  

20. spacer 2.2|2565417|31|NZ_CP049774|CRISPRCasFinder matches to KM873719 (Flavobacterium phage FCL-2, complete genome) position: , mismatch: 9, identity: 0.71

tgcatctaattctttttttgcaattacttct	CRISPR spacer
tgcttctaattcttcttttgcaaccccaata	Protospacer
*** **********.********.. *  . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1162101 : 1171690 11 Enterobacteria_phage(37.5%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage