CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027664	Pseudomonas stutzeri strain 1W1-1A chromosome, complete genome	1 crisprs	DEDDh,csa3,cas3,WYL,DinG	0	0	3	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027664_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027664_1

2318109-2318207

Orphan

Consensus_repeat	Method
CGAGCGGCTGCTGGTGGTGACCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027664_1

>merge|NZ_CP027664|1|2318109-2318207|CRISPRCasFinder
CGAGCGGCTGCTGGTGGTGACCCGCGCCGACAATGGTCCGCTGCACGACTGGCTTGGCGCCCATGCCGAGGACTGCGAGCGGCTGCTGGTGGAGACCCG

>NZ_CP027664|1|1|2318109-2318207|CRISPRCasFinder
CGAGCGGCTGCTGGTGGTGACCCG	CGCCGACAATGGTCCGCTGCACGACTGGCTTGGCGCCCATGCCGAGGACTG
CGAGCGGCTGCTGGTGGAGACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027664.1\|WP_106442825.1\|2327311_2328439_-\|methyltransferase	unknown	unknown	gnl\|CDD\|225370
NZ_CP027664.1\|WP_106442824.1\|2326937_2327315_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP027664.1\|WP_014595859.1\|2311477_2313631_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|293739
NZ_CP027664.1\|WP_013981815.1\|2307629_2308313_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP027664.1\|WP_049339009.1\|2324138_2325218_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|379138
NZ_CP027664.1\|WP_048328595.1\|2308302_2309571_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP027664.1\|WP_106442818.1\|2313730_2314819_-\|tRNA-(uridine(54)-C5)-methyltransferase-TrmA	unknown	unknown	gnl\|CDD\|235332
NZ_CP027664.1\|WP_106442822.1\|2322756_2323995_-\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP027664.1\|WP_106442821.1\|2320157_2322359_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NZ_CP027664.1\|WP_011912105.1\|2309652_2310330_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP027664.1\|WP_011912111.1\|2316336_2316900_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153229
NZ_CP027664.1\|WP_017245375.1\|2319174_2320161_+\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238
NZ_CP027664.1\|WP_013981831.1\|2326304_2326709_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP027664.1\|WP_014595858.1\|2311041_2311449_+\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|260133
NZ_CP027664.1\|WP_106442820.1\|2318665_2319178_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP027664.1\|WP_014595872.1\|2328532_2329309_+\|ferredoxin--NADP-reductase	unknown	unknown	gnl\|CDD\|99792
NZ_CP027664.1\|WP_045631812.1\|2310332_2311052_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|182136
NZ_CP027664.1\|WP_011912112.1\|2316968_2317943_+\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|224886
NZ_CP027664.1\|WP_011912110.1\|2314910_2316206_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP027664.1\|WP_106442823.1\|2325223_2326270_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|379138

Protein	Function_ID	Function_description	E-value
NZ_CP027664.1\|WP_106442825.1\|2327311_2328439_-\|methyltransferase	gnl\|CDD\|225370	COG2813, RsmC, 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis].	6.26106e-99
NZ_CP027664.1\|WP_106442824.1\|2326937_2327315_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	3.94107e-47
NZ_CP027664.1\|WP_014595859.1\|2311477_2313631_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	5.08725e-78
NZ_CP027664.1\|WP_013981815.1\|2307629_2308313_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.17445e-77
NZ_CP027664.1\|WP_049339009.1\|2324138_2325218_+\|serine-hydrolase	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.00143e-31
NZ_CP027664.1\|WP_048328595.1\|2308302_2309571_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.74153e-46
NZ_CP027664.1\|WP_106442818.1\|2313730_2314819_-\|tRNA-(uridine(54)-C5)-methyltransferase-TrmA	gnl\|CDD\|235332	PRK05031, PRK05031, tRNA (uracil-5-)-methyltransferase; Validated.	0
NZ_CP027664.1\|WP_106442822.1\|2322756_2323995_-\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	3.08778e-22
NZ_CP027664.1\|WP_106442821.1\|2320157_2322359_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NZ_CP027664.1\|WP_011912105.1\|2309652_2310330_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.15786e-15
NZ_CP027664.1\|WP_011912111.1\|2316336_2316900_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153229	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinson's disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly conserved cysteine located at the nucelophile elbow region typical of these domains. This cysteine been proposed to be a site of regulation of DJ-1 activity by oxidation. DJ-1 is a dimeric enzyme.	4.32097e-72
NZ_CP027664.1\|WP_017245375.1\|2319174_2320161_+\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	4.37511e-93
NZ_CP027664.1\|WP_013981831.1\|2326304_2326709_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	4.3967e-22
NZ_CP027664.1\|WP_014595858.1\|2311041_2311449_+\|diacylglycerol-kinase	gnl\|CDD\|260133	cd14264, DAGK_IM, Integral membrane diacylglycerol kinase. This mostly bacterial family of homo-trimeric integral membrane enzymes, the products of the dgkA gene, catalyzes the ATP-dependent phosphorylation of diacylglycerol to phosphatidic acid. Escherichia coli DAGK participates in the membrane-derived oligosaccharide cycle (MDO cycle) by recycling lipids to restore phosphatidylglycerols that were used up in the biosynthesis of MDOs. DAGK also recycles diacylglycerols that are produced during the biosynthesis of lipopolysaccharides (LPS) back to phospholipids. DAGK is not the main source of phosphatidic acid in de-novo biosynthesis of glycerophospholipids. Escherichia coli DAGK has low activity as an undecaprenol kinase.	3.92651e-45
NZ_CP027664.1\|WP_106442820.1\|2318665_2319178_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	5.91602e-82
NZ_CP027664.1\|WP_014595872.1\|2328532_2329309_+\|ferredoxin--NADP-reductase	gnl\|CDD\|99792	cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	2.95674e-123
NZ_CP027664.1\|WP_045631812.1\|2310332_2311052_+\|phosphotransferase	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.33118e-57
NZ_CP027664.1\|WP_011912112.1\|2316968_2317943_+\|XdhC-family-protein	gnl\|CDD\|224886	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones].	1.06681e-57
NZ_CP027664.1\|WP_011912110.1\|2314910_2316206_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.18727e-171
NZ_CP027664.1\|WP_106442823.1\|2325223_2326270_+\|serine-hydrolase	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	2.43987e-46

>NZ_CP027664.1|WP_011912112.1|2316968_2317943_+|XdhC-family-protein
MDSVDLAVLRRARDWLRDGHAVVLYTVIETWGSAPRPVGSLLALRGDGRVEGSVSGGCVEDDLLARVMADEPPSTCQLITYGVSKEESARFGLPCGGTLRLLQEPLRDAGWIDELLSRCAAHERLLRRLDMASGAVVLQPAGREAVLQFDGHTLRAPFGPAWRLLMIGAGQLSRYVADLAHGLGFEVLICDPREGYAHDWNPAAVRFVPGMPDDAVLAIEPDAHTAIVALTHDPRLDDMALLTALQSEAFYVGALGSRVNSEKRKARLLSLGLGERQVQRLHGPIGLPIGSRTPAEIALSLMAEVVALKNGALAPSLSAQQRCA
>NZ_CP027664.1|WP_011912111.1|2316336_2316900_+|DJ-1/PfpI-family-protein
MSKRVLIPIADGSEDLEAVTLIDVLRRAEFDVVVASAEERRMLTCARGTRITADTMLLDVLAQDFDLIVLPGGMPGAKTLGELEPLAERVRQQARAGLDYAAICAAPAVALHPYGVLKGRQVTCYPGMSDNLTGTHFLDQPVVVDGNCITSQGPATALEFALTLVERLAGRGKRREVADAMLVPATN
>NZ_CP027664.1|WP_011912110.1|2314910_2316206_-|NCS2-family-permease
MLEKLFQLKAHNTTLRTEILAGITTFLTMAYILFVNPSILAETGMDHGAVFVATCLAAAIGSAIMGLVANYPIALAPGMGLNAFFTYTVVLTMGYTWQTALGAVFLSGLIFFGLSIFKIREWIIHSIPLALRAGIAAGIGLFLAIIALKNAGIVVDNPATLVGLGDLSAGGPLLACLGFFLIAALAYRKVTGAVMIGILVVTGLSILLGLSQLNGVVSMPPSLAPTFMQLDIMGALDIGLISVIFAFLFVDLFDTSGTLIGVAQKAELLDKDGKMPRLGRALLADSTATMAGAALGTSTTTSYIESAAGTAAGGRTGLTACVVALLFLLSLFFAPLAGAVPAYATAPALLFVAVLMMSSLAGIDWDDLTVAAPVAIAALAMPLTFSIANGIAFGFIAWTAIKLLAGRWRELSPAMWVLSALFVVKLGWFTG
>NZ_CP027664.1|WP_106442818.1|2313730_2314819_-|tRNA-(uridine(54)-C5)-methyltransferase-TrmA
MPLPQLDPAQYDAQLAEKAARLEELLAPFDAPAAEVFDSPREHYRLRAEFRLWREDGQHHYAMFEQGDKHKAILIDDFPIASRRINELMPQLKAAWQASEVLSFKLFQVEFLTTLSGDALVTLAYHRPLDEAWQAEAEQLAADLGVSLVGRSKGKRIVIGRDYVEEQLVVAGRSFRYRQPEGAFTQPNGEVCQKMLNWAYEALGERDDDLLELYCGNGNFTLPLATRVRRVLATEISKTSVNAALANIEDNGIDNIELVRLSAEELTQALNEVRPFRRLAGIDLKSYDFGSVFVDPPRAGMDPDTCELTRRFERILYISCNPETLAQNIAQLADTHRIERCALFDQFPYTHHMEAGVLLVRR
>NZ_CP027664.1|WP_014595859.1|2311477_2313631_+|sulfatase-like-hydrolase/transferase
MTDATARAQAVQPGLRHHLLFMAGSALALLTLLALLRLALLLFNRELLGDASLATLLEGFGNGLRFDLRVLVYIFVPLSLAVLSPHAVAARRLQRIWLTTCASLAILLGVIELNFYQEFHQRLNALVFQYLGEDPATVLSMLWHGFPVVTLLSVWGGLTLVWALLLRWLDGRCRPRGVSQMRRSPARPPLAWHWRGATLLVLVLISVVAARGTLRQGPPLRWGDAFTTDSVFINQLGLNPALTLYEAAKNRYSDHRDNAWEAVLPEDEALAVTRELLLTGNDQLADPELAAVRRDYRAPEVGRLPVRNVVVILMESFAGRYVGALGSRDGITPHFDRLAGEGLLFERFFANGTHTHQGMFASMACFPNLPGFEYLMQSPEGGNRFSGLPQLLSARAFNDVYVYNGDFAWDNQAGFFGNQGMTRFVGRNDYVDPVVADPTWGVSDQDMFDRAVQELGALAPDEPFYALLQTLSNHTPYALPDPLPVPAVTGHGSQDAHLTAMRYSDWALGRFFEQAKRQPWYKDTLFVVVGDHGFGAPEQLTEMDLFRFHVPLLLIAPGVTEQFGSRREVVGTQVDVVPTIMGRLGGEVRHQCWGRDLLALDERDPGFGIIKPSGSDQTVAMIRGEQILVQPKDLEPRLYRYRLGADASAQRIEDADNAASMLRQLQAYLQVATGSLLANTAGDRERKETATGETLARAAADGEPPIAPKGQRGPREG
>NZ_CP027664.1|WP_014595858.1|2311041_2311449_+|diacylglycerol-kinase
MSHECSSESGSTVADGAALKGRSGLMRLWLAGGYSLAGLRAAYRSEAAFRQVVLLCLLLIPLAFLLEVSRVERAVLIAVVLLAPIVELLNSAIEATVDRISLELHPLSKRAKDMGSAAQLLTMLLIALIWAVILL
>NZ_CP027664.1|WP_045631812.1|2310332_2311052_+|phosphotransferase
MSRAFVLPAREARTSTFQRWWDMRGEWVEEPNRRRAGESGVQRIRPRDLQQPLLYCKRQIGHLYRSPLHPFGRPTVLRECHALQALRDLGVRVPELIYCGTRQQAGQWQALLVTAELQGFVSLEDWYDEGMPGYYGSVVQARMLDAVGRTLGRLHHARWQHGCCYPKHIFLRVHGQDDGAQVEVALLDLEKSRRRLRRHAAARHDLRQLRRHCTAMSEPDWQRLLTAHAGYREVRCDVA
>NZ_CP027664.1|WP_011912105.1|2309652_2310330_+|class-I-SAM-dependent-methyltransferase
MPTSSPIELEFSRKYDRQHAYEYLHKHQDGLARRLSHWRDEQMARRALKIAGEPDLVLDLPCGAGRFWPLLAEHPSRMIFAADNSADMLAIAEAAQPLEVVKRVETFQTSAFAIDMGDNAVDSIFCMRLLHHIADPAHRLAMLREFHRVTRDTLIVSLWVDGNYKAWKRRRLERRRPAKDNQNRFVVARSVIEAEFAEAGFDILDRSDFLPGYAMWRVYVLRKRG
>NZ_CP027664.1|WP_048328595.1|2308302_2309571_+|HAMP-domain-containing-histidine-kinase
MLTKQPFARRIVIAFTLMTLVVSGVFSLGIVAVVYFVESQLVTEELSRELDIVLHEDLPSGRPPRLDAQTRFFSTALPDYPLPEGFATLPEGFTEVVRGDEAYYVYVRDLDGERYVLMEDQNEFEERENALFKTVLAGFLLSVLGAWLLGRLMAHKVMAPVSRLANQVRHRDQLHPLAPPLALQYVDDEVGHLAAAFDSTLGQLRQTLERERLFTADVSHELRTPLMVVLGACELLLAGDLPERSRRQAERIQRAAEEMQALVDTFLLLARARPDQQEVFGGSAGLADVAREQSERWGPPMREKGLAFEVVREGDDQQTYNHTLLGTVMSNLLRNALHYTEHGQVRLVLEHGGFRVEDTGVGIPVDQQERMFQPFVRGAEGRGEGLGLGLSLVRRICAHQGWTVEVHGREPCGSCFAVRLAS
>NZ_CP027664.1|WP_013981815.1|2307629_2308313_+|response-regulator-transcription-factor
MRILVIEDNRDILANVLDYLELKGYLVDCAQDGLSGLHLAATQEYDLIVLDIMLPGIDGYQVCKRLREDARRDTPIIMLTARDALPDRIKGLEAGADDYLIKPFALSELVARIEAVLRRSQGSRRRQLQVGDLVYDLDTLAVSRGGVPIRLNPIGHKLLAILMQRSPAVVRREALEEALWGDNVPDSDSLRSHIHQLRQALDKPFDRPLLHTVHGVGFRLAEDGDAH
>NZ_CP027664.1|WP_106442820.1|2318665_2319178_+|(2Fe-2S)-binding-protein
MSEHSSAAGQTCTISLELNGERRELQVQPWTTLLDLLRDQIGLTGTKKGCDHGQCGACTVLLDGRRINSCLTLAVMHDGARLTTIEGLASTEALHPLQAAFVKHDAFQCGYCTPGQICSAAGLAAEHRASSRDEIREHMSGNLCRCGAYPNILAAIEEALPVLRGQEGAQ
>NZ_CP027664.1|WP_017245375.1|2319174_2320161_+|xanthine-dehydrogenase-family-protein-subunit-M
MTPFSYQRPERIDQAIALHGPDSRYIAGGTNLLDLMKENVLHPGQLIDINGLPLREIEQTAEGGLRIGALVSNADLAWHPQIEQRYPLLSKAILAGASPQLRNMASTGGNLLQRTRCYYFYDTATPCNKREPGSGCGARDGRNRIHAILGASEACVAVHPSDMCVALAALDARVHIEGPHGQRRVDLVDFHRLPGDQPQLDNVLTEGELITAVELPVEGFASHCAYLKVRDRASYAFALVSVAAALEVDGDVIRRARIALGGVAHKPWRLEEAEDLLSGQRAEPARFAAAADRLLQGAQPLADNAFKIDLAHRAIVRALTEAAGGTVR
>NZ_CP027664.1|WP_106442821.1|2320157_2322359_+|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MNSANSPLGKPLDRVDGPLKVTGKACYAAEAEVPGLLYGAVVSSSIARGRVTRIDAAAAEALPGVRLVLTHQNRPPVASYDKPYEDDDAAEGSPFRPLYNDRVLYSGQPLALVVAETQALARHAASLVRVEYEVEAYQTDLQAVLDQAHDAPAELPEPRGDFDSAFAAAANRIDREYETPVEHHNPMEPHASIVQYLPGGELLIHDKTQGVQNCQRYLEQVFDMEGKIRVLSPFVGGAFGSGLRPQYQLPLAVMAALKLKAAVRVELTRQQMFTFGYRPRTVQQLKLAADGEGRLQAIEHRAIGQTSRFEDFTEHEVEWSGMLYACDNVRLGYRLAPLDVYTPLDMRAPGATIGVYALECAMDELAYEIGIDPLDLRLRNYTETNGNEGKRYSSKELRACYQQGAERFGWSRRAAQPRSLRDGHQLVGMGMATGVWEAMQMPASARACLDADGRLLVTSATADIGTGTYTAMTQIAADAMGLPMSEVEFRLGDSSLPQAPLEGGSATVSSVGSAVQRACAGLRQKLLDAVQQSPASPFTGASLDAVEFVDGQLRLKTGEHAVALRDIVQVSGALDAEASVKPDEKRDAWATATHSAVFVEVRVDEDLGTIKVSRVVSAIAAGRIVNPKTAGNQIVGGVVWGIGQALHEETLIDHRLGRYMNHNLAEYHIPVNADIPEVEVIFVEEHDEVVNELGSKGVGEIGIVGVAAAVANAIYNATGRRVRDLPITLDKLL
>NZ_CP027664.1|WP_106442822.1|2322756_2323995_-|acyltransferase
MARTEHFIGLEWLRFLLAIYVVLFHTVHAYVEDEPTWLSELAGVGFFATSSFFVLSGFLLAHVYCRQGELREPARHFLGKRLANLYPLHLFSLLLTAIVLTIIAKLGIPPDDAKASLRYVVYDTNEELSGEARAALEYFMNNRELAFNFILQLLMLHAWNPLYLTFNPPLWSISTLFFFYLCFPLLAPRLMRLRHKGWWLLAIAALYLLPPLWAIQQDAYGIPVTGMLHRMPLLRLPEFLAGILLCGLFREWRAAGGQLGIAARLALGAFVLASFLTTVWLLKGERYWYFLLHNGLLLPAQLALVWLCALIATPRSAAVVGWSQRLGAASLPLFVLHVPVFILFSRSEKLLGAVSAECLEDWADCVAQAGELALTPAFYPLYLGLCIVVCVLAQERAVVPVRQFLLRRVLKV
>NZ_CP027664.1|WP_049339009.1|2324138_2325218_+|serine-hydrolase
MLLPAQLRSPFAALCLLLITLSLAQRAVAQDSIEWSGPFLARLAQVDRQTPGQLGVYVKDMQTGISVSYHGEDAWYLASTVKVPIAIAVMRRVEQDDLTLDSPVTLLASDYVDGAGPTNSHAPGKALSVRYLLDQMLIHSDNTASDMLIRLVGIEQVNAITRELVPEGFGPITTLADVRRLIYGELHPAARTLSGKDFLALKRQPNDAGRLALLPRLIGVERSALVPISLGEAYERYYATPFNSGTLKAYGDLLSALDAGTALGPASTEYLLSVMRRVETGGRRIKAGLPSGTGFAHKTGTQRARICDAGLVDQPGAADSTSQRLIIVACVRGVASTTQAERALRGTGEAVAAAGLIRR
>NZ_CP027664.1|WP_106442823.1|2325223_2326270_+|serine-hydrolase
MIALGALLLPLAGLTACTEQAEATWKDGLEQELRRVDEASPGKLGVYIKHLGEDAELRYDAERFWYLGSAVKVPIALAVLQGVDDGEFRLDQRLTLEAEDKVDGSGDLVWQDNGVDYSLRDLLKEMLIESDNTAANMLIRLVGEDALNQRTRKSMGGDFEAITSFTQVRRDVYGEVHPDAARLDNMQLVELASAPFSKPRYEALARVLNLQQDELKAASMEQAYERYYARQLNSSSLVAYGTMLEKLVRGELLSAESRDLLYGFMKLDTYDNYRLEAGLPEDVPFIQKTGTQLERACHVGVIEPEDERRAIVVVACAEGLDEGKEAGSLFEQVGQAISKALLSEAPPN
>NZ_CP027664.1|WP_013981831.1|2326304_2326709_-|carboxymuconolactone-decarboxylase-family-protein
MSASTRYTNGLAKLEEIDGEAGRKVIDSLQAIAPDLARYVIEFPFGDIYQRPGLDLPQRELATVAALTALGHCQPQLAVHVHGALNVGCTPEQIVEVVIQMAVYAGFPAALNGMHTVKTVFAERGLLPTGNANE
>NZ_CP027664.1|WP_106442824.1|2326937_2327315_-|MerR-family-transcriptional-regulator
MNEVPVRLSIRQFAARTGLSADTLRYYEKIGLLRQVARDASGFRVYGPRDLEWIGFILRLKDTGMALVDIIRYAELRECGATTLAARQALLEEHATRLQERIQRDHDHLDALRAKIALYRQQTSA
>NZ_CP027664.1|WP_106442825.1|2327311_2328439_-|methyltransferase
MPILDTPYASLDLIRQPEQPNEPLQAFDAADEYVLATLHEQRLPAATRVLILNDSFGALACALAAHVEVTSSGDSHLAHLALQKNLARNDLPAERVRFVPASEVAEGPFDRVLIRVPKTLALLEEQLIRLHGQLAPGAQVIAAAMIKHLPRAAGDLLEQYIGPVQASLAVKKARLLSATPSAKPVPRSPYPTRYQLEQPKLELLNHANLFCREGLDIGTRAFLPHLPKALGALRVADLGCGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQAILGERPADIRAGDGLAEQPPGSLDLVLCNPPFHQQQVVGDFLAWRMFTQAKAALTKGGELWIVGNRHLGYHLKLKRLFGNAEQVAATPKFVVLRSIKA
>NZ_CP027664.1|WP_014595872.1|2328532_2329309_+|ferredoxin--NADP-reductase
MTASEEKFTRQRLLEVQTLTPNLFTLRTSRDPGFRFTAGQFARLGVRKPSGCIVWRAYSMVSAPHDEFLDFFSIVVPDGEFTSELSRLEVGDELLVDKQAFGFLTLDRFPDGRDLWLLATGTGIAPFLSILQDFEAWQRFERIILVYSVREARELAYQQLIAELPQRDYLEGLGEKLLYLPVVTRERVPGALHGRITTLIENGELERAADLQLTPEHSRIMLCGNPQMIEDTRAVLKARDLNLAMTRRPGQVAVENYW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1495875 : 1507187

Bacillus_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011911301.1\|1495875_1496265_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-15	40.3
WP_017245989.1\|1496261_1499138_-	response regulator	W8CYF6	Bacillus_phage	4.5e-27	33.5
WP_049325706.1\|1499265_1500906_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	9.1e-17	35.8
WP_003282388.1\|1500898_1501288_-	response regulator	W8CYM9	Bacillus_phage	2.0e-07	31.6
WP_013981223.1\|1501284_1503696_-	PAS domain S-box protein	W8CYF6	Bacillus_phage	2.9e-27	35.1
WP_011911305.1\|1503772_1504159_-	response regulator	W8CYM9	Bacillus_phage	1.2e-12	35.0
WP_037002964.1\|1504208_1507187_-	PAS domain S-box protein	W8CYF6	Bacillus_phage	1.6e-27	34.3

DBSCAN-SWA_2

3681526 : 3720833

Bacillus_virus(10.0%)

protease,tRNA,integrase,transposase

attL 3688727:3688745|attR 3726267:3726285

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014596663.1\|3681526_3682807_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.1e-137	57.6
WP_013982753.1\|3682904_3683543_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	5.4e-58	57.5
WP_011913197.1\|3683632_3684943_-	trigger factor	NA	NA	NA	NA
WP_011913196.1\|3685115_3685877_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_011913195.1\|3685885_3686593_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_011913194.1\|3687441_3688296_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.6e-26	31.1
WP_068507194.1\|3688353_3689739_-\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	1.3e-45	33.6
3688727:3688745	attL	NA	NA	NA	NA
WP_061373579.1\|3689738_3691406_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	2.7e-202	61.9
WP_013982747.1\|3691679_3692174_+	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	1.4e-13	32.9
WP_061373578.1\|3692180_3692903_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_011913189.1\|3692899_3693505_-\|tRNA	tRNA-(ms[2]io[6]A)-hydroxylase	NA	NA	NA	NA
WP_011913188.1\|3693681_3694542_+	universal stress protein	NA	NA	NA	NA
WP_014596654.1\|3694580_3695057_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_011913186.1\|3695464_3698074_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_106443240.1\|3698374_3701389_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.3e-69	24.8
WP_106443241.1\|3701385_3701754_+\|transposase	transposase	NA	NA	NA	NA
WP_045665935.1\|3702300_3703029_+	phosphonate metabolism transcriptional regulator PhnF	NA	NA	NA	NA
WP_106443242.1\|3703079_3704024_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_106443243.1\|3704166_3704961_+	phosphonate ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	5.6e-12	27.0
WP_106443244.1\|3704968_3705994_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_106443245.1\|3706066_3706546_+	phosphonate C-P lyase system protein PhnG	NA	NA	NA	NA
WP_106443246.1\|3706538_3707120_+	phosphonate C-P lyase system protein PhnH	NA	NA	NA	NA
WP_106443247.1\|3707119_3708232_+	carbon-phosphorus lyase complex subunit PhnI	NA	NA	NA	NA
WP_106443248.1\|3708228_3709131_+	alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ	NA	NA	NA	NA
WP_045665942.1\|3709127_3709958_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.9e-10	27.4
WP_106443249.1\|3709968_3710688_+	phosphonate C-P lyase system protein PhnL	A0A285PWH2	Cedratvirus	1.2e-13	28.9
WP_106443250.1\|3710687_3711842_+	alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase	NA	NA	NA	NA
WP_106443251.1\|3711849_3712416_+	phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN	NA	NA	NA	NA
WP_106443252.1\|3712406_3713171_+	phosphonate metabolism protein PhnP	NA	NA	NA	NA
WP_106443253.1\|3713167_3714019_+	EamA family transporter	NA	NA	NA	NA
WP_109727384.1\|3714195_3715143_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_106443255.1\|3715318_3716125_-	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_106443577.1\|3716269_3716836_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_104099078.1\|3716983_3717652_-	cupin	NA	NA	NA	NA
WP_043218978.1\|3717706_3718327_-	glutathione S-transferase	NA	NA	NA	NA
WP_106443256.1\|3718592_3719630_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_106443257.1\|3719861_3720833_-\|integrase	site-specific integrase	NA	NA	NA	NA
3726267:3726285	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3792348 : 3806118

uncultured_Caudovirales_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011913132.1\|3792348_3793017_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	7.6e-87	76.7
WP_106443294.1\|3793116_3794385_-	MFS transporter	NA	NA	NA	NA
WP_106443581.1\|3794613_3795006_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.2e-47	72.9
WP_014596615.1\|3795005_3795365_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	6.8e-34	63.3
WP_019406273.1\|3795364_3795667_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	3.5e-23	57.0
WP_014596613.1\|3795663_3795996_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	7.7e-40	73.4
WP_106443295.1\|3795992_3796976_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	2.4e-142	74.9
WP_106443296.1\|3797060_3798065_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_011913125.1\|3798095_3800735_-	PAS domain-containing protein	A0A2K9L5I4	Tupanvirus	2.6e-13	28.6
WP_013982686.1\|3800664_3801828_-	hypothetical protein	NA	NA	NA	NA
WP_013982685.1\|3802141_3803329_-	porin	NA	NA	NA	NA
WP_106443297.1\|3803586_3806118_-	pyrroloquinoline quinone biosynthesis protein PqqF	A0A1V0SJA4	Klosneuvirus	3.5e-15	29.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage