CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	9 crisprs	cas3,DEDDh,WYL,RT,DinG,csa3	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027804_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_1

514980-515093

Orphan

Consensus_repeat	Method
GGAGAGGGAGAAGTGCAGACTGGCCAGCAGAGTCATGATGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_1

>merge|NZ_CP027804|1|514980-515093|CRISPRCasFinder
GGAGAGGGAGAAGTGCAGACTGGCCAGCAGAGTCATGATGGATCTCCTGTGCGATAGACGGGGCCCGTGACGGAGAGGGAGAAGTGCAGACTGGCCAACAGAGTCATGATGGAT

>NZ_CP027804|1|1|514980-515093|CRISPRCasFinder
GGAGAGGGAGAAGTGCAGACTGGCCAGCAGAGTCATGATGGAT	CTCCTGTGCGATAGACGGGGCCCGTGAC
GGAGAGGGAGAAGTGCAGACTGGCCAACAGAGTCATGATGGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_106551676.1\|513781_513976_-\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|238219
NZ_CP027804.1\|WP_073351915.1\|506338_506650_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|370819
NZ_CP027804.1\|WP_106551674.1\|511364_512498_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223604
NZ_CP027804.1\|WP_011707522.1\|524036_524852_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP027804.1\|WP_016352131.1\|522087_522420_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106551675.1\|512590_513649_-\|L-asparaginase-2	unknown	unknown	gnl\|CDD\|182958
NZ_CP027804.1\|WP_011707537.1\|507136_507616_+\|bacterioferritin	unknown	unknown	gnl\|CDD\|153099
NZ_CP027804.1\|WP_106551672.1\|504275_506342_-\|tRNA(Met)-cytidine-acetyltransferase	unknown	unknown	gnl\|CDD\|224361
NZ_CP027804.1\|WP_102987898.1\|519599_520205_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP027804.1\|WP_106551673.1\|507818_509924_+\|DUF885-domain-containing-protein	unknown	unknown	gnl\|CDD\|377577
NZ_CP027804.1\|WP_106551678.1\|517934_519596_+\|alpha,alpha-phosphotrehalase	unknown	unknown	gnl\|CDD\|182849
NZ_CP027804.1\|WP_106551680.1\|520876_521752_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|182525
NZ_CP027804.1\|WP_010635988.1\|510531_511119_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379492
NZ_CP027804.1\|WP_106551682.1\|524962_525931_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP027804.1\|WP_080708612.1\|516345_517866_+\|PTS-trehalose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|182896
NZ_CP027804.1\|WP_106553713.1\|515296_516244_+\|HTH-type-transcriptional-regulator-TreR	unknown	unknown	gnl\|CDD\|181905
NZ_CP027804.1\|WP_106551681.1\|522576_524007_-\|gamma-aminobutyraldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237391
NZ_CP027804.1\|WP_011707535.1\|509907_510471_+\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|179969
NZ_CP027804.1\|WP_011707538.1\|506691_506994_+\|bacterioferritin-associated-ferredoxin	unknown	unknown	gnl\|CDD\|381078
NZ_CP027804.1\|WP_106551679.1\|520323_520782_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_106551676.1\|513781_513976_-\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|238219	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.	4.63568e-12
NZ_CP027804.1\|WP_073351915.1\|506338_506650_-\|transcriptional-regulator	gnl\|CDD\|370819	pfam10115, HlyU, Transcriptional activator HlyU. This domain, found in various hypothetical prokaryotic proteins, has no known function. One of the sequences in this family corresponds to the transcriptional activator HlyU, indicating a possible similar role in other members.	3.29678e-46
NZ_CP027804.1\|WP_106551674.1\|511364_512498_+\|hypothetical-protein	gnl\|CDD\|223604	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism].	1.83328e-28
NZ_CP027804.1\|WP_011707522.1\|524036_524852_-\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	8.70942e-76
NZ_CP027804.1\|WP_106551675.1\|512590_513649_-\|L-asparaginase-2	gnl\|CDD\|182958	PRK11096, ansB, L-asparaginase II; Provisional.	0
NZ_CP027804.1\|WP_011707537.1\|507136_507616_+\|bacterioferritin	gnl\|CDD\|153099	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain. Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) bestowing ferroxidase activity.	1.84902e-87
NZ_CP027804.1\|WP_106551672.1\|504275_506342_-\|tRNA(Met)-cytidine-acetyltransferase	gnl\|CDD\|224361	COG1444, COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only].	2.22517e-139
NZ_CP027804.1\|WP_102987898.1\|519599_520205_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	1.26224e-100
NZ_CP027804.1\|WP_106551673.1\|507818_509924_+\|DUF885-domain-containing-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	3.42391e-104
NZ_CP027804.1\|WP_106551678.1\|517934_519596_+\|alpha,alpha-phosphotrehalase	gnl\|CDD\|182849	PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional.	0
NZ_CP027804.1\|WP_106551680.1\|520876_521752_+\|EamA-family-transporter	gnl\|CDD\|182525	PRK10532, PRK10532, threonine and homoserine efflux system; Provisional.	6.79397e-85
NZ_CP027804.1\|WP_010635988.1\|510531_511119_-\|hypothetical-protein	gnl\|CDD\|379492	pfam14163, SieB, Super-infection exclusion protein B. This family includes superinfection exclusion proteins. These proteins prevent the growth of superinfecting phage which are insensitive to repression. It aborts lytic development of superinfecting phage.	3.05652e-44
NZ_CP027804.1\|WP_106551682.1\|524962_525931_-\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	2.18797e-69
NZ_CP027804.1\|WP_080708612.1\|516345_517866_+\|PTS-trehalose-transporter-subunit-IIBC	gnl\|CDD\|182896	PRK11007, PRK11007, PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional.	0
NZ_CP027804.1\|WP_106553713.1\|515296_516244_+\|HTH-type-transcriptional-regulator-TreR	gnl\|CDD\|181905	PRK09492, treR, HTH-type transcriptional regulator TreR.	0
NZ_CP027804.1\|WP_106551681.1\|522576_524007_-\|gamma-aminobutyraldehyde-dehydrogenase	gnl\|CDD\|237391	PRK13473, PRK13473, aminobutyraldehyde dehydrogenase.	0
NZ_CP027804.1\|WP_011707535.1\|509907_510471_+\|methylglyoxal-synthase	gnl\|CDD\|179969	PRK05234, mgsA, methylglyoxal synthase; Validated.	6.11751e-89
NZ_CP027804.1\|WP_011707538.1\|506691_506994_+\|bacterioferritin-associated-ferredoxin	gnl\|CDD\|381078	cd19945, Fer2_BFD, bacterioferritin-associated ferredoxin (BFD) [2Fe-2S]-binding domain. This family includes Escherichia coli and Pseudomonas aeruginosa bacterioferritin-associated ferredoxin BFD which binds an [2Fe-2S] cluster and appears to interact with bacterioferritin (E. coli BFR/YheA and P. aeruginosa BfrB), a dynamic regulator of intracellular iron levels. It has been suggested that BFD and bacterioferritin form an electron transfer complex which may participate in the iron storage or iron immobilization functions of bacterioferritin. For Pseudomonas aeruginosa, it has been shown that mobilization of Fe3+ stored in BfrB requires interaction with BFD, which transfers electrons to reduce Fe3+ in the internal cavity of BfrB for subsequent release of Fe2+. The stability of BFD may be aided by an anion-binding site found within this domain. In addition to BFD, the BFD-like [2Fe-2S]-binding domain is found in a variety of proteins such as the large subunit of NADH-dependent nitrite reductase and the Cu+ chaperone CopZ. It comprises a helix-turn-helix fold, and binds an [2Fe-2S] cluster via 4 highly-conserved Cys residues, found in loops between the alpha-helices. For the class of proteins having a BFD-like [2Fe-2S]-binding domain, the Cys residues are organized in a unique C-X2-C-X31-35-C-X2-9-C-arrangement. [2Fe-2S] clusters are sulfide-linked diiron centers, a primary role for which is electron transport.	4.57953e-21
NZ_CP027804.1\|WP_106551679.1\|520323_520782_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	4.93552e-37

>NZ_CP027804.1|WP_106551676.1|513781_513976_-|heavy-metal-associated-domain-containing-protein
MTIELTVSGMSCGGCAASLQKALLAQPAVSTASVDFASSKAVIESELSKAELIALIEGKGFSAS
>NZ_CP027804.1|WP_106551675.1|512590_513649_-|L-asparaginase-2
MTLPIRKTLLAAVLGLTLSPMAMALPNVHILATGGTIAGAGQSATQSNYEAGKVAIETLIAAVPEMKNVADVQGEQVVKIGSQDMNDEVWLKLAKRVNELLAKDDVDGIVITHGTDTMEETAYFLNLTVKSDKPVVLVGAMRPSTAMSADGPMNLYNAVVTASDPSSKGRGVMVAMNDTVLDARDVTKTNTTGVQTFASPNFGPLGYIHNGKIDYQRSPARLHTSKTPFDVSKLDKLPQVGIVYSYANATDLPAKAMVDAKFDGIVSAGVGNGNLYHTLFDTLAKASKDGIRVVRSARVPTGSTTLDAEIDDAKYGFVAAETLNPQKARILLMLSLTQSKDPAQIQRWFQQF
>NZ_CP027804.1|WP_106551674.1|511364_512498_+|hypothetical-protein
MSTFLDPQIHGMGGDGIHRSARPLASICKPAGRAVSGPLVVLLAWRLLIMLITLLLFLLSAVTIYLACEYFVNGIEWTGHHFKFSQSATGSLLAALGTALPECIVTLTALLMGNAPAQQQIGIGAALGGPLVLSTIGYAAVGVTLLLCMSREHRAIDGEVQREIGRDQAWFVGIFLVAVALGMVAFTGKTWLAPLFVLVYLVYVRRELKQTDSHEVELPEPLKLDPGAEIPALGKVLLQTLVALVVVALAAQLFVHQLESMGELFGLSPVLAALLLSPVATEMPELMNVLIWVRQGKHRLALANISGAMMIQGTIPKAFCLLFTPWLLDSTMMVSSLVTLLAVVLLWWGFSRERMTAGRLAWVGLIYLGFCGWLMAH
>NZ_CP027804.1|WP_010635988.1|510531_511119_-|hypothetical-protein
MKRWIQHFYQLNRLNWLMVWLLLCCSIILLFPAGLMKGAVSQWAATHAAWLGVGMLIAISYFCSQGFLIAWEWACDEWQSRRQQDQLAQMISFLDFNEKAVLREFVLQRKSVINLPITEPAVKNLMDAGVLTYAYGKPVREKEDENQIRALMIALPARPLLTYKVLGLSRGKMSDEQVEQIMNARPKFAQKSFQR
>NZ_CP027804.1|WP_011707535.1|509907_510471_+|methylglyoxal-synthase
MNSRSDHSYGARQGNGRRFRLGYGSIQTTLLRMMSMEQIAREMAAHKRVALVAHDNMKTPLLNWVMRRKEELKLHHLYATGTTGTMLGKQAQLPITCLFSGPMGGDQQLGALIAEGKIDVLIFFWDPLNAVPHDPDVKALLRLAAVWNIPVATNEATADFIMDSPHMRQAFSVQIPDYAGYLKARTQ
>NZ_CP027804.1|WP_106551673.1|507818_509924_+|DUF885-domain-containing-protein
MHFLPNKLALACAIALSLAACNDNSSNAPADPAATKASLMQTMDEALREGQALDPYGFAIDAASIAKRKALDSSLLKRLDALDSSVLGERDRLFYDMIRWDLQINLAGYDLPQSQIPIHHFRNRVVDLADEVGAAPASGKAARTVERGFDYFEQSSAERVAPGDAAWRRDLDRPAAAPVPVSKARAATAPLAWYQEHLTWLKAYDGYLAEVKHQFELGSAQGNTLPDELVDRLLAQLNSKLDGEAIAGAYLGWQQLPGEADEALRSEYKGVLDSINGRYLALRDYLDYQHGGAYAVRLGNGECDDGFCGMTNGRDWYRWLLKKHTTTDMTPEQVHALGLSEVERIFGAMVKVCHTVGKCDSDDVAQSKQSGQIYAFFRYLNEPAFFYQNPLAVWSAGLNPDNAAGATLSGPQQQALAEHERALQEYNAFKSKAALVLPDFFDAERTIPKLDYEVVPVSYADAPYGGVAWYQDGNPQTGRKGQFFLNTYYPYGLQSWNISTLLAHEAAPGHHFQITIAQELAAKDPDFPQYVANASYTAYAEGWALYTEYLADHDMGLYQGRGLYDPAVGDVKVEGSSAFNNQLQYFGRLNEEMLRAMRLVVDTGIHWYGWSHDQAVNYMKENSALGAGDISSEVPRYMAYTGQATSYKAGQLALIRMRESAEQALGTGFDLKAFHHHVLEYGMLPISVLEQKNKQWIEQSK
>NZ_CP027804.1|WP_011707537.1|507136_507616_+|bacterioferritin
MKGDPKIIAHLNKVLANELIAINQYFLHARIYDDWGLKALGHKEYHESIDEMKHADELVKRVLFLEGLPNLQDLGKLRIGETVEEMLRCDLSLEMDAIPDLKVAIAYAESVQDYISRDLFQEILEDEEEHVDWLETQLDLIDRIGLENYQQSQLHHGGS
>NZ_CP027804.1|WP_011707538.1|506691_506994_+|bacterioferritin-associated-ferredoxin
MAGKRGILLPIVICTTNHSHLDFMAIQHEVNTMYVCLCRGITDSQIRKAVQAGKTEFRQLKQSLEVGAQCGKCVRMTMEIIAAELDKAELEQAPLYYEVA
>NZ_CP027804.1|WP_073351915.1|506338_506650_-|transcriptional-regulator
MLKKLFTALFGGQPAAVAEVTPTEYAGYLIYPEPMAEGGQYRLAGRITKELDGVLQTHRFIRSDLFANPADAEHFMVQKAHTFIDQMGDRMFEPRKPADSTAS
>NZ_CP027804.1|WP_106551672.1|504275_506342_-|tRNA(Met)-cytidine-acetyltransferase
MMPAALDELRQALARTGERRLIWLEGDEADCIARADTLLSGVSYWLGDGPSEHHPQPAAKALQRLGQECDTLVFNAFSGFHPDAFGALAGTLRAGGLLLLLTPPRAQWPAWPDPDRVRLVAQPEDMVLAGHGFLARLVRLLAGDPALELTPPATPTPWQPVGPARPLSCDQARALPAIHKVLHGHRRRPLVLSADRGRGKSSLLGLAAAELLRQQPDLQIVVTAPSQATVATLFAHAANTLEDAPQLLARLSYCSPDRLVHEPLQPDLLLVDEAAAIPTPLLEVMLARHGRIVFATTEHGYEGTGRGFHLRFKRVLDRETPGWQEIHLAEPIRWSSRDPLEPLVFRLLGLNAEVETPPAPTQPGWRRLKQDALAADEGLLHRVFGLLVLAHYQTTPSDLRYLLESPALDIHLLEQGPHLLGVALVAREGEIADELAEAIWAGRRRPRGHLLPQSLLAHAGFKTAGARSYARVMRIAIHPTLHRHGLGSLLLAHLEQHYQAAGLDYLGSAFSASADLLPFWRKAGLRVLRIGLQRDAASGSHAALLLKALQPSCAAELADWHRRFVHQLPTLLAGELKNLESELVWQCLQDGEASSSGLDEFDQDELACFAHHHKPFELCQPSLQRWLAGNLTKLAQLDPAERQLLIATIWQYADWGALAARLQLAGKPAVIKALRSLLARRLPPATTR
>NZ_CP027804.1|WP_106553713.1|515296_516244_+|HTH-type-transcriptional-regulator-TreR
MDKKLTILDIARLSGVGKSTVSRVLNQDPKVKQATRDRVEQIIAEHGFVPSKSARAMRSQSQQVVGIIVSRLDSSSENQAVRGMLETLYLRGYDAVLMESKFSPAKVQEHLAVLERRGVDGIILFAFNDLDYAAMAPLRDKLVLVARDHPGFSSVCFDDAGAVRTMLDQLAARGIQDIAYLGVDTSDLTTGQRRLDAYLDYCAGQGLAARSALGDLSLQSGYRLAGELLTPTTGALVCASDTLAIGAAKYLQEQGRSEVLVTGLGNNPMLSFLFPNALSLDLGYKGAGEQAARQLLGQIEQDLPPLATIAPSHPL
>NZ_CP027804.1|WP_080708612.1|516345_517866_+|PTS-trehalose-transporter-subunit-IIBC
MGTIPKTLGPTDWPKRATQTNINGVTEGRLMSKINAQHLATLIDKIGGKENIATVSHCLTRLRFVLNDPAKADSKAIETIPAVKGSFTQGGQFQVVIGNEVEQWYKALTEEIGVSGGSKEAAKQAARQNMNPLERGISHLAEIFVPLLPAIITGGLILGFRNVIGDIKMFDDGTHSLTEISQFWAQVHAFLWLLGEAIFHFLPVGVCWSAVKKMGGSEILGIVLGITLVSPQLMNAYGIGQQTPEVWDFGLFVIQKVGYQAQVIPALLAGVFLAWVETNLKRIIPAYLYLVIVPFISLLLAVIVAHAFIGPFGRWLGDGVGFAAKAAMTGSFAPIGAALFGFLYAPLVITGIHHTTNAVDLQLMQSMGGTPIWPLIALSNIAQASAVVGIILISRKENEREISVPAAISAYLGVTEPAMYGINLKYKFPMLCAMVGSSLAALICGFAGVMANGIGVGGLPGILSIQPQYWAVYSLAMLVAIVVPVVLTLLVYKRQQAAGKLAQASA
>NZ_CP027804.1|WP_106551678.1|517934_519596_+|alpha,alpha-phosphotrehalase
MSQTPWWQSAVIYQIYPKSFQDSAARGTGDLKGIMARLDYLKTLGVDALWLTPVYVSPQVDNGYDIADYLAIDPAYGTMADFEALLAAAHARDIRIVMDIVVNHTSTEHAWFKSALGDKNSPYRDYYIWRDPVDGGVPNNWQSKFGGSAWELDPATGQYYLHLFAREQADLNWENPAVRAEVKNIIHFWAKKGVDGFRLDVINLISKDQAFPNDEIGDGRRFYTDGPRIHEFLQDVSREVFAPVGAMTVGEMSSTSLEHCQRYGALDGSELSMVFNFHHLKVDYPNGDKWTKAPFDFLELKRIFNHWQSGMHGKGWSALFWCNHDQPRIVSRFGDEGEHRVVAAKMLASTLHGLQGTPYIYQGEEIGMTNPGYQRIDDYQDVESRNIFAIKQAEGMSEAEILAILGAKSRDNSRTPMQWSAAPNAGFTSGTPWLKPAANYPVINAEAALADQHSVFWHYRDLIRLRKAHPIFTQGDYQELLAGHPQIWAYARRANGQTLLVVSNFYGEPATFALPDELATGKGRLLLGNYPDSPARPQSCMLRPYESLIWLVE
>NZ_CP027804.1|WP_102987898.1|519599_520205_+|sugar-O-acetyltransferase
MNEVMTKTAVRGAEWQKMVAGEPYDAGDPELKAARERCRRLYHTFNTSWQEKPARDALLHELLGGRGKACAINPPFFCDYGANIFVGENFYANVGCTILDVCEVHIGDNVLLAPGVQIYTAAHPVAVAPRIKGVEFGKPVRIGHNVWIGGSVVICPGVTIGDNSVIGAGSVVTKDVPAGVVAAGNPCKVLRPMTAEELAAV
>NZ_CP027804.1|WP_106551679.1|520323_520782_-|Lrp/AsnC-family-transcriptional-regulator
MTDKFDLLILAELQQDARLPIPELAHRVGLSAPACYRRVRALREAELIEREVALVAPATMGWPITMLVLVTLERDHGRIIDEMIASLQGEPEVMDLWYVTGEQDFVLQVAARDMQSYDLFTRRVLHAREQVRSFKTLVVMKQHKRCGALLPA
>NZ_CP027804.1|WP_106551680.1|520876_521752_+|EamA-family-transporter
MNKMPPNTTAFSSLLAVILAMLSITLGASLAKSLFPLIGAAGTTLFRLGCAALLLSLVFRIWRMPFDRRTLLGAIPYGLSLGAMNLLFYLAIERIPLGVALAIEFIGPLTVALLGSRHRADFLWLVLAIVGLLLLLPLRAAEQTLDPLGAALALGAGVFWGLYMLTGKRAGALLGAQAPALGMWVGALLVLPFGLGGASEATFTLPVVLTIVGVGLLSSAIPYSLEMFALRRLPLKSYGILTSGEPAMGALMGLLLLGEQLPPAQWLGIAAIIVASMGTTWQGGRRRTEPA
>NZ_CP027804.1|WP_016352131.1|522087_522420_+|hypothetical-protein
MNMKNVIKMLAVAGLMTAGFAQASVPADFNAAPGVLFVNWHATAAVEGKANPMLEVRDESGDVVASVHANLMGTQQVQIPSRTQGNLTVSLGDQSSDYRIPFGIGSGKQR
>NZ_CP027804.1|WP_106551681.1|522576_524007_-|gamma-aminobutyraldehyde-dehydrogenase
MKLSTQLLIDGQFVTGDGQAEPILNPATGELIASVPEASFEQVNRAVNGAQRAFAHWSRTTPAQRSNLLLRLADAIERHAEEFAALESLNCGKPYLAVLNDELPAVVDCFRFFAGAARCLQGPLAGEYIEGHTSMIRRDPIGVVGSIAPWNYPLMMAAWKMAPVLAAGNTVVLKPSEQTPLTALRLAELASELFPRGVINIVCGRGESVGAPLVEHPLVRMVSLTGDIATGQKILQSAARTMKRTHLELGGKAPVIIFDDADLEAVVAGIRTFGFYNAGQDCTAACRIYAQGKIYDKFVAAMTEAVASIKVGGPREEGVEMGPLISDRQRNRVASFVERAQSSGHVEVTAGGKIRPGNGFFFEPTLIAHARQEDEIVRREVFGPVVSVTRFSDAEQVVQWANDSDYGLASSVWTKDLSLASKVASHLQYGCTWINTHFMLTSEMPHGGMKMSGYGKDLSLYALEDYTVPRHIMLKL
>NZ_CP027804.1|WP_011707522.1|524036_524852_-|ABC-transporter-permease
MKRDHGNQPSGLLKYAAIGGLLFLHFPILFIFLYAFTSESKSYQFPPPGLTLKWFEVTLNRPDVWRAIQLSLEVAGLATLAAMVLGTLAAGAIARSRFFGQEVVSLLLVLPIALPGIVTGIALRSAYGVMEIPFSFWTIVIGHATFCVVVVYNNALARFRRTNQSLIEASMDLGADGFQTLRYVILPNLATALLAGGMLAFALSFDEVIVTTFTAGQQTTLPIWMYQELIRPRDRPVTNVVALIIVAFTTIPILLAYYLTRDGQDVAGSGK
>NZ_CP027804.1|WP_106551682.1|524962_525931_-|ABC-transporter-permease
MSAPHSASLAMSQPTAPLSYRPLRRLSTLLYGRPGLLLAILLGPPLLWLGIIYVGSLLMLLSNAFFGLDEFSGQIRHELGLQNFVALLRAENLDVILRTVGMSLLVTLACALLGFPVAYYMARYTSGKTRALFYVGIMLPLWSSYLVRVYAWKLILAKEGVISWLADTLGLDWLLDAILSLPVVGGPSLSFSRIGTFIVFVYVWLPFMILPIQAAVERIPRSLLEASGDLGATPAQTFRTLILPLALPGVVAGSIFTFSLTLGDYIIPGIIGNSTMYIGQVVYMQQGTAGNLPFAAAFSLVPILIIAIYLTIAKRLGAFDAL

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Crispr_ID: NZ_CP027804_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_2

806899-807015

Orphan

Consensus_repeat	Method
GCTCACGCCTAACCAAATGAAAAACCGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_2

>merge|NZ_CP027804|2|806899-807015|CRISPRCasFinder
GCTCACGCCTAACCAAATGAAAAACCGTGACGGCAATTGATCTCGTTTGAGAGGGCGCGGTCGGGAAAAATAGCGGTCTATTCCCATCGCTCACGCCTAACCAAATGAAAAACCGTG

>NZ_CP027804|2|2|806899-807015|CRISPRCasFinder
GCTCACGCCTAACCAAATGAAAAACCGTG	ACGGCAATTGATCTCGTTTGAGAGGGCGCGGTCGGGAAAAATAGCGGTCTATTCCCATC
GCTCACGCCTAACCAAATGAAAAACCGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_011707270.1\|816477_817359_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP027804.1\|WP_011707281.1\|804066_804861_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_CP027804.1\|WP_043168093.1\|801682_801943_+\|DUF3343-domain-containing-protein	unknown	unknown	gnl\|CDD\|378728
NZ_CP027804.1\|WP_106553724.1\|807110_808013_-\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	unknown	unknown	gnl\|CDD\|274810
NZ_CP027804.1\|WP_106551814.1\|801987_802428_+\|methylamine-utilization-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_011707272.1\|815557_815878_-\|multidrug-transporter	unknown	unknown	gnl\|CDD\|182618
NZ_CP027804.1\|WP_029302255.1\|804857_805367_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|223872
NZ_CP027804.1\|WP_005304459.1\|808132_808582_-\|RNA-polymerase-binding-protein-DksA	unknown	unknown	gnl\|CDD\|182722
NZ_CP027804.1\|WP_106551816.1\|808701_809445_-\|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl\|CDD\|234733
NZ_CP027804.1\|WP_106551813.1\|800903_801686_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129344
NZ_CP027804.1\|WP_005304632.1\|798734_799508_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|237896
NZ_CP027804.1\|WP_106551812.1\|799742_800894_+\|2-hydroxyacyl-CoA-dehydratase-subunit-D	unknown	unknown	gnl\|CDD\|224689
NZ_CP027804.1\|WP_039214507.1\|802429_802957_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP027804.1\|WP_106551819.1\|815865_816321_-\|multidrug-transporter	unknown	unknown	gnl\|CDD\|182471
NZ_CP027804.1\|WP_017411017.1\|805378_806878_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|236939
NZ_CP027804.1\|WP_041218374.1\|815056_815458_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319940
NZ_CP027804.1\|WP_106551818.1\|810171_812619_+\|ATP-dependent-helicase-HrpB	unknown	unknown	gnl\|CDD\|236950
NZ_CP027804.1\|WP_106551817.1\|809487_810027_-\|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl\|CDD\|274058
NZ_CP027804.1\|WP_016351880.1\|812692_815014_+\|penicillin-binding-protein-1B	unknown	unknown	gnl\|CDD\|273952
NZ_CP027804.1\|WP_106551815.1\|803021_803879_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|234741

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_011707270.1\|816477_817359_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.10905e-36
NZ_CP027804.1\|WP_011707281.1\|804066_804861_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	1.14416e-163
NZ_CP027804.1\|WP_043168093.1\|801682_801943_+\|DUF3343-domain-containing-protein	gnl\|CDD\|378728	pfam11823, DUF3343, Protein of unknown function (DUF3343). This family of proteins are functionally uncharacterized. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.	1.59713e-09
NZ_CP027804.1\|WP_106553724.1\|807110_808013_-\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	gnl\|CDD\|274810	TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase. This protein resembles a shortened glutamyl-tRNA ligase, but its purpose is to modify tRNA(Asp) at a queuosine position in the anticodon rather than to charge a tRNA with its cognate amino acid. [Protein synthesis, tRNA and rRNA base modification].	3.14213e-156
NZ_CP027804.1\|WP_011707272.1\|815557_815878_-\|multidrug-transporter	gnl\|CDD\|182618	PRK10650, PRK10650, multidrug/spermidine efflux SMR transporter subunit MdtI.	3.60149e-18
NZ_CP027804.1\|WP_029302255.1\|804857_805367_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	1.35015e-66
NZ_CP027804.1\|WP_005304632.1\|798734_799508_+\|ABC-transporter-permease	gnl\|CDD\|237896	PRK15066, PRK15066, inner membrane transport permease; Provisional.	1.55024e-172
NZ_CP027804.1\|WP_106551816.1\|808701_809445_-\|DNA/RNA-nuclease-SfsA	gnl\|CDD\|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	9.17391e-133
NZ_CP027804.1\|WP_106551813.1\|800903_801686_+\|hypothetical-protein	gnl\|CDD\|129344	TIGR00241, Uncharacterized_protein_MJ0004, CoA-substrate-specific enzyme activase, putative. This domain is found in a set of closely related proteins including the (R)-2-hydroxyglutaryl-CoA dehydratase activase of Acidaminococcus fermentans, in longer proteins from M. jannaschii and M. thermoautotrophicum that share an additional N-terminal domain, in a protein described as a subunit of the benzoyl-CoA reductase of Rhodopseudomonas palustris, and in two repeats of an uncharacterized protein of Aquifex aeolicus.This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.	2.40909e-96
NZ_CP027804.1\|WP_005304459.1\|808132_808582_-\|RNA-polymerase-binding-protein-DksA	gnl\|CDD\|182722	PRK10778, dksA, RNA polymerase-binding protein DksA.	7.33054e-78
NZ_CP027804.1\|WP_106551812.1\|799742_800894_+\|2-hydroxyacyl-CoA-dehydratase-subunit-D	gnl\|CDD\|224689	COG1775, HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB [Amino acid transport and metabolism].	3.24642e-141
NZ_CP027804.1\|WP_039214507.1\|802429_802957_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	2.24184e-16
NZ_CP027804.1\|WP_106551819.1\|815865_816321_-\|multidrug-transporter	gnl\|CDD\|182471	PRK10452, PRK10452, multidrug/spermidine efflux SMR transporter subunit MdtJ.	6.96322e-21
NZ_CP027804.1\|WP_017411017.1\|805378_806878_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|236939	PRK11623, pcnB, poly(A) polymerase I; Provisional.	0
NZ_CP027804.1\|WP_041218374.1\|815056_815458_+\|VOC-family-protein	gnl\|CDD\|319940	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein Bacillus subtilis YwkD and similar proteins. uncharacterized subfamily of vicinal oxygen chelate (VOC) family contains Bacillus subtilis YwkD and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.1173e-72
NZ_CP027804.1\|WP_106551818.1\|810171_812619_+\|ATP-dependent-helicase-HrpB	gnl\|CDD\|236950	PRK11664, PRK11664, ATP-dependent RNA helicase HrpB; Provisional.	0
NZ_CP027804.1\|WP_106551817.1\|809487_810027_-\|RNA-2',3'-cyclic-phosphodiesterase	gnl\|CDD\|274058	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase. This protein family consists of bacterial and archaeal proteins with two tandem copies of Pfam domain pfam02834. Members for which activity has been measured perform a reversible, ATP-independent 2'-5'-ligation of what is presumably a non-phyiological substrate: half-tRNA splice intermediates from an intron-containing yeast tRNA. The physiological substrate(s) in prokaryotes may include small 2'-5'-link-containing oligonucleotides, perhaps with regulatory or biosynthetic roles. [Transcription, RNA processing].	1.90755e-34
NZ_CP027804.1\|WP_016351880.1\|812692_815014_+\|penicillin-binding-protein-1B	gnl\|CDD\|273952	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP027804.1\|WP_106551815.1\|803021_803879_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|234741	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed.	2.26278e-164

>NZ_CP027804.1|WP_017411017.1|805378_806878_-|polynucleotide-adenylyltransferase-PcnB
MASRQFEVITRCTIFSQIANFCRKVLGKEDGEQSAESPIPARVAGQRRTLSRDQHPISRKEISENALKVLYRLNKGGYEAYLVGGGVRDLLLGKTPKDFDIATDATPEQIKSLFSNCRLIGRRFRLAHIVFGRDVIEVATFRGHHHQVNTSKHVSAQSDEGMLLRDNVYGTIEEDAERRDFTVNALYYSAKDFTLHDFEGGLEDLAERKLELIGDPETRYREDPVRMLRAVRFAAKLDMTISPRTAAPIKELAPLLQDIPAARLFEETLKLFLAGDGLATYKLLREYGLFQQLFPQVAALFTPHGNSPYEQFIEQALIDTDTRVREDKRVTPAFLYATLLWGCVEARGRVLENESGLPWYDAFMLAINEVLDNQVRIIAVPRRFTTDVRDIWALQQRLTRRQGRHPERAMEHPKFRAAFDFLLLRNRVERGLGELASWWERYVESNPDVRPQLQREATRRPASGERGQAGEARSNDGEKRSSNSRNRRRPRRRKPKAAE
>NZ_CP027804.1|WP_029302255.1|804857_805367_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MTEVFVAIGSNLSDPLGQARRAVAALARLPGSVLVQASSFYSSRPMGPADQPDYVNAVARLNTRLTPLALLDQLQSIELEQGRVRKDERWGPRTLDLDLLLFGDQIIRHERLIVPHYGMKEREFVLLPLAEIAPALVLPCGTPLAELVARCPHNDLAIIAPGADEQEPL
>NZ_CP027804.1|WP_011707281.1|804066_804861_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MSKITTTNLLKMKQEGQRITAITAYDATFAKLFDDEGAHVLLIGDSLGMVLQGGQDTLGVSMDEMVYHTRCVVRGTTNALVVTDMPFMSYATPEQTYQNAARLMAAGARMVKMEGGDWLCDSIRHLTRNGVPVCGHLGLTPQSVHVFGGFKVQGRDEFQAQEIYRQALELQAAGIQLLVLECVPTSLAERISKALRIPVIGIGAGPATDGQILVMHDAFGITSGYVPKFTKNFLAETGDMRAAIRLYVKQVSEGTFPGPEHCFN
>NZ_CP027804.1|WP_106551815.1|803021_803879_-|pantoate--beta-alanine-ligase
MLVVNNPAALREQIGQWRREGLTIAFVPTMGNLHQGHLTLVKEAHHHADKVVASIFINPMQFDKAEDLANYPRTLEQDCAALETAGVDMVFTPTPEIMYPQGLASHTFVEVPGLSGLLEGALRPGHFRGVSTVVTKLFNLVQPDVACFGQKDFQQLALIRKMVADMAMPIQIVGVPTVRAEDGLALSSRNGYLTAAERALAPELARTMNWIAVQIEAGDHHLPSLVAQASQRLDKAGFRTDAIDIVDAATLEAATDQSEQLVILMAAYLGKARLIDNRVVTLARP
>NZ_CP027804.1|WP_039214507.1|802429_802957_+|rhodanese-like-domain-containing-protein
MMRLQSRTLMASLIAASFALGGCGDNQFEQETKLEQAAVQLSQETQQGGYQLLTVAELKTRMDKGEALVIIDTMPFEDSYKKEHIQGAKNFAFVKEAKSGDDWSQIVEGSGTPEQLLALLGDDKTRPVVFYCGFVKCGRSHNGAAWAVTQGYQQVYRVPGGIFAWKGAGYPVTAE
>NZ_CP027804.1|WP_106551814.1|801987_802428_+|methylamine-utilization-protein
MIKSYPMAVYLRVLARLALGGFFVASAGFKLAAPELFAEQIGAFGLLWSPFIPLAVWGLVGLEFCAGLAVIGNRRWGLWLVVALLALFIPVLGYGIAIGLDISCGCLGRADLSSLPQALLRDLLLLTLAGALLRHSRPVFTVPKEQ
>NZ_CP027804.1|WP_043168093.1|801682_801943_+|DUF3343-domain-containing-protein
MNAEFLYLFHSTLGTLRLRKRLEQQPHPFRVCDVPRRLSAGCGLAIRLHCPPEEWQQWCQCGETAAVFRCDEDGEYCELARYPAAG
>NZ_CP027804.1|WP_106551813.1|800903_801686_+|hypothetical-protein
MSLTIGIDSGSTATKGILFDHRDGGRIVRRFLVPTPFRPLAAIEQGWETLSAALPERPHLTLTGYGRDLASFADRRVTEISCHGLGARLLCPSVHTVIDIGGQDSKVIQLDGEGNLTDFLMNDKCAAGTGRFLEVITRTLGARVEQLDELLQGADPHDISSMCTVFAESEAISLRSAGIPAESILAGIVRSMARRSANFIGRLGARPTVLFTGGVSHCATFRHYLAQGVGCDVATHPDAQFAGALGAALFGARARSGGKS
>NZ_CP027804.1|WP_106551812.1|799742_800894_+|2-hydroxyacyl-CoA-dehydratase-subunit-D
MSLITELPAIFDSFSDARRQGFLAVMALKERQIPLVGTYCTFMPQEVAMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNRADDEASRTLWRSEIVRFKELLEQQFGNPISEQALRDAIALKNRERRALADFYRLGQLNPPALSGTDILKVVYGATFRFDKEQLISELQEMTRRIKAEYAEGKRLDARPRILITGCPIGGAADKVVRLIEEHGGWVVGYENCTGAKATEQCVSEEGDLFDALTDKYLAIGCSCISPNHQRMKLLSQMVEEYQADGVIDVILQACHTYAVESLAIKRHVRDRHGIPYMAVETDYSSADKGQLATRLAAFIEML
>NZ_CP027804.1|WP_005304632.1|798734_799508_+|ABC-transporter-permease
MNLTTYYIAFKSILAKEISRFTRIWIQTLVPPAITMSLYFVIFGNLIGGRIGDMGGFSYMEFIVPGLIMMSVITNSYSNVASSFFSAKFQRNVEELLVAPVPNYVIIAGYVGGGVARGLCVGLIVTLVSLFFVPLQIHHLFSVCFTVLLTAILFSLGGLINAVFAKTFDDISIIPTFVLTPLTYLGGVFYSISLLPPFWQGVSQVNPIIYMVNAFRYGFLGISDVPLGTAYLIIIGFIVALYGLAWWLISRGTGLRH
>NZ_CP027804.1|WP_106553724.1|807110_808013_-|tRNA-glutamyl-Q(34)-synthetase-GluQRS
MNTIPSSQTRPYIGRFAPSPSGPLHFGSLIAALGSFLQARARQGRWLVRIEDIDPPREMAGAAPLILQTLEAHGLQWDGEVMYQSRRHGRYDEIIDQLYRAGDLYWCRCTRREIMASGGFYNGHCRTLGLTAEGSAARVRQHHPVYDFEDGLQGRIAVPAALAEEDFIVRRRDGLYSYNLAVVVDDMDCGITEIVRGADLLEPTVRQIALYQTLGAPVPAWVHLPLAVQADGNKLSKQNHAPALAQDEVRPALWQALHFLGQCPPPELMASRVDEIIDWGIAHWQLARVPASEKIQLADY
>NZ_CP027804.1|WP_005304459.1|808132_808582_-|RNA-polymerase-binding-protein-DksA
MPTGENRKSLGPLAIAGVAPYQEKPGEEYMNDQQKAHFRKILGAWRNQLMQEVDRTVDHMKDEAANFPDPVDRAAQEEEFALELRTRDRERKLIKKIEKTLLLLEDDDFGYCEHCGIEIGIRRLEARPTADLCVDCKTLAEIKEKQMAG
>NZ_CP027804.1|WP_106551816.1|808701_809445_-|DNA/RNA-nuclease-SfsA
MIFDPPLQSGQLISRYKRFLTDVQLDNGEVITIHCANTGAMTGCAEPGTRVWYSTSSNPKRKLPHSWEIAESPAGHFICVNTARANQLARELIEQDALAPLRGYARLRTEVKYGEENSRIDLLLEDDHLPACYIEVKSVTLLDEREQAGMGYFPDAVTTRGAKHLRELMAMKAAGHRAVLLFMVLHSGIVRMRPAAHIDPHYSLLIEQAITAGVEILCYRPHVGVQSMVAQDFIPFESCHLLPEGSE
>NZ_CP027804.1|WP_106551817.1|809487_810027_-|RNA-2',3'-cyclic-phosphodiesterase
MLTRMAKLFFALPAEALAPNLVAWRDQLPWPGQPVPAANLHLTLAFLGEADQLTTTRLMAAVERQHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGYRPHVTLSRKASEPPALLPAPDFVLQADRFCLYQSLSTPDGVRYEPLACWPLRAREKMAS
>NZ_CP027804.1|WP_106551818.1|810171_812619_+|ATP-dependent-helicase-HrpB
MSSLPIVSVLPALFAAIDNHASVILQAPPGAGKSTLLPLELVRQNRLPGRIIMLEPRRLAARNIATFLARQLGEKVGERIGLRVRGESRTSAATRLEIVTEGVLTRMLQQDPELTCVSLVIFDEFHERSLHADTALAFAIESQQGLRDDLKLLVMSATLDGMALERLLPEAPVVRSEGRGFPIDYHYRPANRQQWLEPQVGAVVLEALAAHAGSLLVFLPGQGEIERLAQWLEGRLPDEVTLAPLYGRLDMAAQQAAIEPAPAGRRKLVLTTNVAETSLTIEGISVVVDSGLERRASFDIKSGVTRLETRPIAKASATQRAGRAGRLGPGICYRLWSSEVQERLAEQSPPDILTQELTGLLLDAAQWGAKVEELPLLDMPPAAAVASAQRLLVSLGAMKPEGEQQLTPAGRAMAAFGTHPRLARMLLRARELEAEGLTGIVADAAFLVALLEEDLRGSERLSVLFHRRQGALRQSAARWFERLGARPASAQGQWLGLLCALAWPDRIGKLRSGSRYQLSGGVSCDLVEGHPCQGLGAIIAIEMGQNERGSRIFIAEPVELDELVRQLPELVGERQWFDWDEREERVRAERQQVLGELVLSQRPLTDLSDEQKGRCLLQGIRRKGLHVLPWDDASEGLLARLRCARDWLPDEGWPAMDEASLLADLELWLLPAVSGMTRLEQLKKLDMSDILRQSLPWPLPKRLDEALPGHFTAPTGSRVRIRYQPGQAPVIPVRIQEMFGQAATPCVADGRVALVVELLSPAQRPLQITADLAAFWAGSYELVKKEMKGRYPRHYWPDNPLEAMPTRVTKKKMGL
>NZ_CP027804.1|WP_016351880.1|812692_815014_+|penicillin-binding-protein-1B
MATQRRKRTPKKAAPKRTIWRTLFWLGFKLSLVGAAFMVVFGIYLDTKVRERFDGEKWQLPVMVYSRPLELYPSQRLSQAQMLRELNMLSYKQVRQPHTPGEYAVSGNRIELIRRPFEFHDGADAARGLRLTFNGARLEGIQSLENQRQLGYAQMDPVLLDRLNTEDREDRLLVRIAEVPDSLLITLLTTEDRDFYQHGGVSPVAIMRAMAANLLAGRTVQGGSTLTQQLAKNFFLTRERSLWRKAQEAYMAVLIDYRYSKDEILEAYLNEVYLGQNFSQGVYGFGLASYFYFGIPVNELDIDQVALLVGMVKGPSYYDPWRFPERAKARRDLVLKLLMDHGSLQPAEYELASKQPLGIITRGQMSYGRTPAFMGLLKREIQSRFGPDLLKQSGLKIFTSLDPIAQHAAEQAVESGLAQIEKLRGKKKLEAAMVVSDWHKGEVVAMVGGRDPRYAGFNRALDARRQIGSLVKPAVYLTGLSNGLTLGTPLKDQPIRIRGKDGQIWTPQNYDRKFRQSVPLMDALASSLNVPTVNLGLQVGLDKVVDTLHKLGVEQEIQPYPSLVLGAVALSPMEVNQMYLPIANQGLTQPLSAIRAVVNSDGSKLYQHDEAAKRVTDEQASWLTLFAMTKTVSQGTARALGAKFPGATMAAKTGTTNELRDSWFTGLDNNELVSIWVGRDDNTPAGLTGASGALQLFSGYMSQRGVNSLAMNMPQGVSWASFSRASGTRVTSDCPGSLQVPAKLAGLAEPMGCASPVSSPANALDNWFNGFFN
>NZ_CP027804.1|WP_041218374.1|815056_815458_+|VOC-family-protein
MSHPLFDAIHHVAIIASDYARSRHFYHQVLGLPIIAETLREERQSWKLDLALPDGSQLELFSFPAPPPRPSRPEACGLRHLAFRVAELDRVIAHLQGHGVEVEPVRVDELTGKRFTFFADPDGLPLELYEAGR
>NZ_CP027804.1|WP_011707272.1|815557_815878_-|multidrug-transporter
MHPLIIVLGAALLDIGANMAINRSVGFRHKGWGFLGILLVLCAFTLLSEAVSTGKIDLAVAYATWGAIGILGTALGGLLLFGERLKPIGWVGMLVMAVAVTLLTTA
>NZ_CP027804.1|WP_106551819.1|815865_816321_-|multidrug-transporter
MLFNRMLLARIFLTGAILTEVAGTSSMAMIPENEAGWLNYLPMWLLISFSYLLLAKAAKTISIGIAFALWEGLGIALITVVSVLFLDYHLNAQELIGLALAIVGIVLVTMGETHDEPTAGTGSIRSLGAAHDKPAAGTRSLGAAKEAVCTR
>NZ_CP027804.1|WP_011707270.1|816477_817359_+|LysR-family-transcriptional-regulator
MKLYQIQLFVESASSGSIANTARRLGKSRSAVSTAIAALEVELGVELFERGANQSRLTEIGEQVLDDCKRLLQAANSLKLKCEHYASGAEVALRVARDDAIPEAVWREMLGALRHQFPGTSISLVLASPPELPALVEEGFVDAAFGLITEEQERSGLNIEVLNPIRTLMVVAPSHPLASLKRVLQQDLTGHTQVTLSYVDEFSVKSLLPIGGHHIGLSSFELMRDAVLDGLGWAVLPSPLIQSQLRQGELLTLKHKFSLQWRDYGVYLSENAYHGKVLAWLRKAIQAYLEPFE

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP027804_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_3

976275-976366

Orphan

Consensus_repeat	Method
CACGGCGGTTGCTGCGGTGGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_3

>merge|NZ_CP027804|3|976275-976366|CRISPRCasFinder
CACGGCGGTTGCTGCGGTGGTGGTCATCACGGCCACGATCACGGTCATGACCACGGTGACGACCACGGTCACGGCGGCTGCTGCGGTGGTGG

>NZ_CP027804|3|3|976275-976366|CRISPRCasFinder
CACGGCGGTTGCTGCGGTGGTGG	TCATCACGGCCACGATCACGGTCATGACCACGGTGACGACCACGGT
CACGGCGGCTGCTGCGGTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_106551901.1\|981214_981550_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106551894.1\|966961_967942_-\|undecaprenyl-phosphate-4-deoxy-4-formamido-L-arabinose-transferase	unknown	unknown	gnl\|CDD\|182669
NZ_CP027804.1\|WP_011704938.1\|977779_978586_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|236791
NZ_CP027804.1\|WP_106551893.1\|964973_966965_-\|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA	unknown	unknown	gnl\|CDD\|236156
NZ_CP027804.1\|WP_039215447.1\|967948_969085_-\|UDP-4-amino-4-deoxy-L-arabinose-aminotransferase	unknown	unknown	gnl\|CDD\|183263
NZ_CP027804.1\|WP_016349725.1\|981676_982018_-\|DUF2956-domain-containing-protein	unknown	unknown	gnl\|CDD\|378579
NZ_CP027804.1\|WP_011704944.1\|985895_986750_-\|Tim44-domain-containing-protein	unknown	unknown	gnl\|CDD\|226830
NZ_CP027804.1\|WP_011704942.1\|982104_983943_-\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|211667
NZ_CP027804.1\|WP_106551902.1\|984175_985717_-\|cyclic-diguanylate-phosphodiesterase	unknown	unknown	gnl\|CDD\|238923
NZ_CP027804.1\|WP_106551896.1\|974679_975366_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106551895.1\|972547_973630_-\|hydrolase	unknown	unknown	gnl\|CDD\|182883
NZ_CP027804.1\|WP_106551898.1\|976691_977660_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP027804.1\|WP_106551899.1\|978736_980143_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP027804.1\|WP_011704934.1\|975405_975612_+\|YheV-family-putative-metal-binding-protein	unknown	unknown	gnl\|CDD\|226060
NZ_CP027804.1\|WP_011704932.1\|973598_974498_-\|chemotaxis-protein-CheV	unknown	unknown	gnl\|CDD\|223905
NZ_CP027804.1\|WP_011704929.1\|971079_971322_-\|YheU-family-protein	unknown	unknown	gnl\|CDD\|179903
NZ_CP027804.1\|WP_045790506.1\|969305_970652_+\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223936
NZ_CP027804.1\|WP_106553730.1\|971411_972566_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|375032
NZ_CP027804.1\|WP_106551900.1\|980231_981101_-\|tetratricopeptide-repeat-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_011704936.1\|976461_976677_-\|SlyX-family-protein	unknown	unknown	gnl\|CDD\|377222

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_106551894.1\|966961_967942_-\|undecaprenyl-phosphate-4-deoxy-4-formamido-L-arabinose-transferase	gnl\|CDD\|182669	PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional.	0
NZ_CP027804.1\|WP_011704938.1\|977779_978586_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|236791	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	5.62168e-81
NZ_CP027804.1\|WP_106551893.1\|964973_966965_-\|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA	gnl\|CDD\|236156	PRK08125, PRK08125, bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA.	0
NZ_CP027804.1\|WP_039215447.1\|967948_969085_-\|UDP-4-amino-4-deoxy-L-arabinose-aminotransferase	gnl\|CDD\|183263	PRK11658, PRK11658, UDP-4-amino-4-deoxy-L-arabinose aminotransferase.	0
NZ_CP027804.1\|WP_016349725.1\|981676_982018_-\|DUF2956-domain-containing-protein	gnl\|CDD\|378579	pfam11169, DUF2956, Protein of unknown function (DUF2956). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	1.44117e-46
NZ_CP027804.1\|WP_011704944.1\|985895_986750_-\|Tim44-domain-containing-protein	gnl\|CDD\|226830	COG4395, COG4395, Uncharacterized protein conserved in bacteria [Function unknown].	1.48811e-38
NZ_CP027804.1\|WP_106551902.1\|984175_985717_-\|cyclic-diguanylate-phosphodiesterase	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.80663e-91
NZ_CP027804.1\|WP_106551895.1\|972547_973630_-\|hydrolase	gnl\|CDD\|182883	PRK10985, PRK10985, putative hydrolase; Provisional.	3.25428e-137
NZ_CP027804.1\|WP_011704942.1\|982104_983943_-\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|211667	TIGR01530, Probable_5'-nucleotidase, NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. [Transport and binding proteins, Other, Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides].	6.72369e-91
NZ_CP027804.1\|WP_106551898.1\|976691_977660_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.39735e-26
NZ_CP027804.1\|WP_106551899.1\|978736_980143_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP027804.1\|WP_011704934.1\|975405_975612_+\|YheV-family-putative-metal-binding-protein	gnl\|CDD\|226060	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only].	9.76312e-19
NZ_CP027804.1\|WP_011704932.1\|973598_974498_-\|chemotaxis-protein-CheV	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	4.04636e-39
NZ_CP027804.1\|WP_011704929.1\|971079_971322_-\|YheU-family-protein	gnl\|CDD\|179903	PRK04966, PRK04966, hypothetical protein; Provisional.	1.47816e-37
NZ_CP027804.1\|WP_045790506.1\|969305_970652_+\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl\|CDD\|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NZ_CP027804.1\|WP_106553730.1\|971411_972566_+\|diguanylate-cyclase	gnl\|CDD\|375032	pfam17178, MASE5, Membrane-associated sensor. MASE5 is a family of bacterial membrane-associated sensor domains. It is an integral membrane sensor domain found in various GGDEF domain proteins, including a diguanylate cyclase DgcY (EcSMS35_1716) from multidrug-resistant environmental isolate Escherichia coli SMS-3-5 (Hengge R. et al. (2015) [A systematic naming system for GGDEF- and EAL-containing c-di-GMP turnover proteins in Escherichia coli K-12]. J.Bacteriol., in preparation).	3.74267e-65
NZ_CP027804.1\|WP_011704936.1\|976461_976677_-\|SlyX-family-protein	gnl\|CDD\|377222	pfam04102, SlyX, SlyX. The SlyX protein has no known function. It is short less than 80 amino acids and is found close to the slyD gene. The SlyX protein has a conserved PPH(Y/W) motif at its C-terminus. The protein may be a coiled-coil structure.	7.3566e-22

>NZ_CP027804.1|WP_011704934.1|975405_975612_+|YheV-family-putative-metal-binding-protein
METRRKKRFIAGAVCPACGKMDTMMLYMEHGVEKVTCVECGDTQVQTQAEVDKVTRETEQVIGVFRPE
>NZ_CP027804.1|WP_106551896.1|974679_975366_-|hypothetical-protein
MHHAIEYQHFSTSHLQVGARKRVPVGQLLRITRGAALLRLGAHEWLMPTGSHFWLCADALAAFTPLAGCQHDLLTCSVRVEQPERAGWLQPTPLLAALLDGLTQWQRPRDWQGAYGHRLQVILDELPACPIASQPDNALQTAWLALANGQEGSDAAWQQCLAQRGLSDPALAGDALRAQWQLLQAVRLLKSGSQRAQVVSKLGYGDEAALAQASQQWLGTPLEALQAR
>NZ_CP027804.1|WP_011704932.1|973598_974498_-|chemotaxis-protein-CheV
MKSKANQSQGMLLFHLSAKQSFAIGTLKVKEIVPYTQLTAMPHSHPTVLGAASMRGTTIPVIDMAMAVGYRPISKEEMPHCFIIITDCRRTLVGFLVRGIDKITECNWRDIEPPPATLGHNVFVTGVTRVNDQLIQLLDVELILSRVYPDDPSHLYPVLTDVQRERIKPMRILLVDDSSVARRQLMAALDYINIPYEVCTNGKDALTLMQTRASQKTPIDILVSDIEMPGLDGYELAFEVQSDAKLAGAYIILHTSLSSEISVERAHQVGAHEALTKFEANELIQAMLRGAEHHDSLPA
>NZ_CP027804.1|WP_106551895.1|972547_973630_-|hydrolase
MPSTTTACRPDPDGEKPGFSPLPFLSLSPRGPSMLIESHFHAPWWARNPHLQTILPKWLRRQPARFVAERFELADGDFVDLAWSGEISRDERPLIVLFHGLEGSIHSHYAKGLFAHMQRQGNEAVLMHFRGCSGEPNRLLQAYHSGAIEDAQALIAELGRRFPGKPLIAIGYSLGGNMLVNLLARACPSELTGAVVISAPLRLDSCADRVNQGFSRVYQSYLLRTMHHNLQQKIQRQTAAGARWQPQQVRAIATLRDFDEQVTAPLHGFDSADHYYQRCSGLGMLARIPIPTLVIHAADDPFMTEAVIPQAEQLSPMVRYELSRQGGHVGFLHGTPWRPRFWLEERISQWLREQTQGASR
>NZ_CP027804.1|WP_106553730.1|971411_972566_+|diguanylate-cyclase
MLSDEQRRLSSHLEHHLYESRRHALSKGLRWFWAVNQLAILFLLARFYVYQDAHLVVARVLPWSYEVQLVLMTLACLSFPLFWHWLSRQPPAIWQPCLRAGALLWGTGWALLGYAIALVELRGGFSLAFDLIGMLLMTALVALYCEVRLFYSFSTPPLLFLLLEALLVKVPFPAVHWMAVGCLIIMLETGRRMLNGWFELAVSREHENLTLARQLDAMAKRDPLTGLANRRHFDNVGEQILQEAREHHGEFAILLLDVDFFKRFNDHYGHLQGDNCLIAVADCLREAIRQPADVVARYGGEEFVLLLPGADALAASAIAKRIAAALAGRGILHAQSEVSDRVTVSQGIALWHGGQDGIADMLVRADEALYQVKEAGRNGYRLAP
>NZ_CP027804.1|WP_011704929.1|971079_971322_-|YheU-family-protein
MIIPWQELDADTLNNLLEHFVLQEGTEYGEHDVSLADKVADVRTQLQQGLAVIVYSELHESVNIVPKATLDRAQVDDIPE
>NZ_CP027804.1|WP_045790506.1|969305_970652_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MNITVFGSGYVGLVQATVLADVGHQVICVDVDEQKVAALMDGQVPIYEPGLESLLQRNIKSGSLVFTTDAVLAVKHGDVQFLAVGTPPGEDGSADLSHVLTVAETIAQYRDRPVIIVNKSTVPVGTADKVTARVNAILQQRDQSFSFDVVSNPEFLKEGSAIQDCLRPDRIVVGTANEASRQLMRELYEPFNRNHDRILFMDVRSAELTKYAANCMLATKISFINEMAGLAERVGADIEMVRQGIGSDQRIGYQFIYPGCGYGGSCFPKDVKALLATAQELEYDTPLIRAVERVNELQKSRLFQLLSAFFCAEGESLAGKTIALWGLAFKPNTDDMREAPSRALMEALWQAGATVQAYDPEAMQEAQQIYGNCDKLRLMGTKEAALFGADALVICTEWNHFKAPNFAAIKQALRYPLIVDGRNLFDPGRMRDHGFHYYAIGRGESVMK
>NZ_CP027804.1|WP_039215447.1|967948_969085_-|UDP-4-amino-4-deoxy-L-arabinose-aminotransferase
MQDFLPFSRPAIGDAEISAVCDVLKSGWITTGPKNHELEQQFCDTFGCQHAVALCSATAGMHVTLLALGIGPGDEVITPSQTWVSTINIITLLGAEPVFVDVDPDTLMANAELIAPLITARTKAIIPVHYAGAPVDLDPILALAGQHGIPVIEDAAHAVGTRYRERWIGASGTAIFSFHAIKNLTCAEGGMLVTDDKALADKVRMLKFHGLGVDAFDRMSLGRKPQAEVITPGFKYNLADINAAIALVQLARLPELNAKRAELVARYQERLAGLPLAPLAVPGYPHLHAWHLFMVRVDPDRCGLDRDQLMQALQERGIGTGLHFRAAHTQKYYRERYPTLSLPHTEWNSSRLCTLPLFPDMTLADVDRVVAALIDILE
>NZ_CP027804.1|WP_106551894.1|966961_967942_-|undecaprenyl-phosphate-4-deoxy-4-formamido-L-arabinose-transferase
MNNTDIKLVSVVIPVYNEEASLPALLSRVTAACDQLSQDYEVILIDDGSHDGSTELIRDAAAGEGSKLVGVLLNRNYGQHAAIMAGFETAKGDLVITLDADLQNPPEEIPRLVEAAMQGYDVVGTMRRNRQDSWFRKTASKLINKSVQKATGVYMSDYGCMLRAYRRHIIDAMLCCQERSTFIPILANSFARRTIELEVGHAERAHGESKYGLMHLINLMYDLVTCMTTTPLRLLSIVGSVVAGIGFTFSILLILMRLILGADWAADGVFTLFAILFTFVGVQLLGMGLLGEYIGRMYTDVRARPRYFIHQIVRSATTPSQQEAEQ
>NZ_CP027804.1|WP_106551893.1|964973_966965_-|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA
MKVVVFAYHDIGCTGIEALLEAGYEIQAVFTHADDPGENRFFGSVAQLCAEHNLPVYSPEDVNHPLWIERIRELAPQALFSFYYRNMLKQAILDIPTVGAFNLHGSLLPAYRGRAPINWCLVNGEAETGITLHQMTAKPDAGAIVAQQAVTIADDDTALTLHGKVRLAARALLEQELPKLLAGDIRLTPQDESKASYYGRRTPADGELHWHRPARELHNLVRAVTQPYPGAFSFAGDRKLTVWKSHWLTQQSDKQPGTILSQEPLRIACGEGVLEILAGQAEGGLYVRGAQLARELGLVEGMKIGAKASNTLRKARLTRVLILGVNGFIGNHLTERLLQDGGYEVYGLDIGSSAVDRFIGHPNFHFVEGDISIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYHKRIIFPSTSEVYGMCDDHSFDEDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRIIENKENRCDGQIINIGNPDNEASIQQMAEILLAKFEAHPLRDQFPPFAGFKLVESKSFYGDGYQDVSHRRPSIANARRLLDWEPTIEMEETIGNTLDFFLQGAVTTGVEHD
>NZ_CP027804.1|WP_011704936.1|976461_976677_-|SlyX-family-protein
MSQQLNDRLETLESRLAFAEYTVEQLNDEVTTQGRELDRLKHQIQLLVDKLQSVQPSQIASMAEETPPPHY
>NZ_CP027804.1|WP_106551898.1|976691_977660_-|PQQ-binding-like-beta-propeller-repeat-protein
MIKSAIYLVAICLILTGCEQSSSPDRQLTLANQGLLSADLASDGKQAIVSSLSQGTVVWDLEQGKERWRWRQSDNPDNFIIITRFSADDSHAVTATPDSFGIWRLQDGQSQGYYSLPESRLRDIALSADGRQVLIGREDGKAEVVDTRTGRRLQFLGHTEQVNTVDLSPNGRYALTGGNDYSAYLWDTRSGQVVWRFNHAGRVVLARLDPSGRLAFTADSRQASIWDLTTGKELSRLQFDHRFEVYTAARFANDGKWLITGAPSRQLSLWQVSDGSLLQSWRVSPHPKVKPPSAVVYGVALRDNSHLVSASSSGLAEIWTIK
>NZ_CP027804.1|WP_011704938.1|977779_978586_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MNNFLKVSLLAAAVAVSLTACQKDEKTAANTAEVKAEASKPAEAPKAEAKSFEEQSGYAIGLSMGRYIANTLERQQELGIKLDNSVILKGVTDGLGKEAKMTDEEIQKVLQQYDAKINELTKAKADKDAVENQKKGEEYLAANAKKEGVKSTESGLQYQVEKMGTGAKPKATDIVKVHYTGTLTDGTKFDSSVDRGEPATFPLNQVIPGWTEGVQLMPVGSKFKFFLPSKLAYGEHGAGSIPANAVLVFDVELLAIEKPAADGDNAKK
>NZ_CP027804.1|WP_106551899.1|978736_980143_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MAESKPRVLLVEDTRSLAVVYEQYLAQDGYEVLRADCGQQALAQLMSSPPPVVLLDLELPDMSGMDILQQITEQQLPCSVVVITAHGSVDVAVEAMRLGAFDFLTKPFDGKRLCATARNALKHQQLSSLVAQYRENFERSSFAGFIGASMPMQAVYRIIESAAPSKATVFITGESGTGKEVCAEAIHQCSPRREQPFIALNCAAIPHDLMESEIFGHVKGSFTGAQGDRKGAASLADGGTLFLDEICEMDLDLQSKLLRFIQTGTLQRVGSGKLETVDVRFVCATNRDPLLEVKAGRFREDLYYRLHVIPLSLPPLRERGEDILLLARTLLQSYAKEENKRFKDFDAEAARVLLDYPWPGNVRELQNVVRNIVVLNDRELVSPDILPPPLNGSRASLLAAIPSATATGSGAVVATNAPIRPLWLVEKETIEQAIASCDGNIPKAATLLEISPSTIYRKKQGWEEASLA
>NZ_CP027804.1|WP_106551900.1|980231_981101_-|tetratricopeptide-repeat-protein
MDNPPDFMAQWDYRDPAASALRFHALLPEARAAADLQYELELLTQIARTHSLQRQFAQAHQLLDEIEPRLTDATPRARLRALLERGRTFNSAGDKASAKTLFEQAWQLGLKHKELYLAIDAAHMIAIAAPLEEQSRWHQLAMELAERSTDQKVRGWLATLYNNQGWTLFELGRIDEARGFQQKCLAWHEQHNNQAKAFIARWSLARLLRAQGQHEQALADLMQLKGDMAAAGVAEDGYLFEELGENALVLDEPAAAEYFSRAWFLLSQDRWLKANEAERLARLKLLAKL
>NZ_CP027804.1|WP_106551901.1|981214_981550_-|hypothetical-protein
MNPAPLYLLAPLVLFIVTLLLYRISPLRAVAAGSARWFILPAFTLFILLIIINGAADPSLRNPAFHWLMPGLGFALSLFPALPKALVPRLAIKEGAFAALGLMLMSLGMVY
>NZ_CP027804.1|WP_016349725.1|981676_982018_-|DUF2956-domain-containing-protein
MAKYDKISPETQQEAMKIARANQKPGQTKEQTQLIAQGIQKGIDEYKKQMKVRAREASRQKKLQAKAKQSHAAPQDEEPDDIVELVEVSRQHPLPWLLLAISWLGFAAWFWLR
>NZ_CP027804.1|WP_011704942.1|982104_983943_-|bifunctional-metallophosphatase/5'-nucleotidase
MKKTLLAVTVSITLFGLTACNSENSSKEHIPLDLTIAHINDTHAHLDPTENALAIQPTGQELFKFNAKLGGYPRLKFKLDELRSQAANEGRNFMVLNGGDAFQGTLYFTQFKGEEESRLLSDMGIDAMVLGNHEFDLGNQAIKDFVSRVNFPVLASNMVKSSSATLKDSENIHEYVIKEVNGESVGIFGLVLENMHDISSPDTDTKFLPMIETAQKMVDTLKSKGANKIIMVTHIGLQNDQAVAKAVNGIDLIVGGHSQTFLGDITELNSIGYTAHNQNPADDNTYAQIVSNPDGGKTCIVQAGEWAKGYGLVNVSLSKEGQLTKCEGRNTLMTGDDFTKEVAKKKVPLSGTEQTNVVDFINKSPVIEIVPENTAMRDVIDTEYKPAVAELEAKIIADVPTKLTHVRVPTTPDGAGLIDPLVAESLYWKLNKLNTKVDFTIQNAGGVRADVNAGPLSVGYVMGTLLPFGNKIAAFNLKGKDVRATLEYAVDYSIGLETGIAASSGAFPYVGHLSYTYDGKLAKGSRITKLELLDANGQWQPLDDEKVYRVGANTYIASGKDGYNGLLKREELPNKGDYVDSGVGENEMFMEYAESQGTLNPLPYATVTYYKP
>NZ_CP027804.1|WP_106551902.1|984175_985717_-|cyclic-diguanylate-phosphodiesterase
MALPFLRRSNMPRLLASLLCCATLILISLVTLYWQTWSMTRQQAQTAAERAMTQIDSALHHSTLAARAALPLASRPCREVARELRVLVATSPYVRSVNLSRNGRLYCSSIFDEIDLKDRLQNSQHELLRLEAVTQLGRKPSLLFYHLSEGDHAVVVAINPYHLSKPLQWHLAGPHSWVQIGEQWLDLQGKVHDGQPPSLRGFNYRLDSTTFGYSLNQGFPLSAVLAMTLQKQGSMVLLILALGGLAGLATYRWWSHISTPTQELRRAIIKQEFVPYLQPIVVSQSGQLHGCEVLMRWQHHRQGLIRPDLFIPLAEESGLIILMTQTLMQQVRLQFAPHAAALPPRFHFSFNICARHCQQLSLLDDCRSFLAAFTANPITLVLELTERELITPNHLTERLFEELRQMGVRIGLDDFGTGHSSLTYLQQFHVDYLKIDQSFVAMIGTNALSRHILDSTISLATRLGLQTIAEGVETQEQADFLVERQVDYLQGYLYGRPLTPQQFLQQLSPTPVP
>NZ_CP027804.1|WP_011704944.1|985895_986750_-|Tim44-domain-containing-protein
MKKMLTLFAVILAIGLGAPIAEAKKFGGGKSFGKSYKTAPAQPAAKPVDTKNPTVGAQAPKKGGMMGGLLGGLLAGGLFAYLLGSGAFEGLQGMDFLLIALLALGAVFLIRTLRKGKMAAPQQQTAYAGYQPPQSAAPQQFEQNHSAPQATGFADSDVPFRLPPGFDMNGFLAGARDHYRTLQEAWNKNDLEKVREYVSPELFEQLKAERAELTGEQHTEVMYVDTQLVRADYGSDWAQVSVRFSGRYMDRQEQVEEDIKEVWHLERNLAKDNAPWHIVGIEQL

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Crispr_ID: NZ_CP027804_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_4

1422076-1422180

Orphan

Consensus_repeat	Method
CTTGGAATTTGTCGCTCATATCTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_4

>merge|NZ_CP027804|4|1422076-1422180|CRISPRCasFinder
CTTGGAATTTGTCGCTCATATCTTCGCGGCCTTGTTCTGTTCATTCACTGGCAGATATCCGCTGCAGGCCATGATCCGGCCTTGGAATTTGTCGCTCATATCTTC

>NZ_CP027804|4|4|1422076-1422180|CRISPRCasFinder
CTTGGAATTTGTCGCTCATATCTTC	GCGGCCTTGTTCTGTTCATTCACTGGCAGATATCCGCTGCAGGCCATGATCCGGC
CTTGGAATTTGTCGCTCATATCTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_024943890.1\|1414656_1414980_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106552105.1\|1412626_1414660_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372638
NZ_CP027804.1\|WP_043159854.1\|1426572_1427979_-\|hexose-6-phosphate:phosphate-antiporter	unknown	unknown	gnl\|CDD\|236564
NZ_CP027804.1\|WP_106552108.1\|1424214_1425156_-\|pseudouridine-synthase	unknown	unknown	gnl\|CDD\|211334
NZ_CP027804.1\|WP_039215278.1\|1418685_1419816_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225406
NZ_CP027804.1\|WP_010673955.1\|1410831_1411176_+\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|182759
NZ_CP027804.1\|WP_106552106.1\|1416452_1418072_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP027804.1\|WP_041217718.1\|1423651_1424119_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239647
NZ_CP027804.1\|WP_011705313.1\|1418104_1418626_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP027804.1\|WP_024943889.1\|1415161_1415800_+\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|235555
NZ_CP027804.1\|WP_011705316.1\|1422386_1423493_-\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP027804.1\|WP_106552109.1\|1425233_1426001_-\|PTS-transporter-subunit-EIIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP027804.1\|WP_106552112.1\|1430504_1432412_-\|PTS-transporter-subunit-EIIA	unknown	unknown	gnl\|CDD\|182066
NZ_CP027804.1\|WP_076361245.1\|1425994_1426306_-\|PTS-fructose-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|224362
NZ_CP027804.1\|WP_106552111.1\|1428889_1430311_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370244
NZ_CP027804.1\|WP_073349496.1\|1411253_1412567_-\|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223222
NZ_CP027804.1\|WP_158704821.1\|1428467_1428881_-\|CesT-family-type-III-secretion-system-chaperone	unknown	unknown	gnl\|CDD\|341113
NZ_CP027804.1\|WP_106552113.1\|1433043_1433559_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181235
NZ_CP027804.1\|WP_106552107.1\|1419981_1421352_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_CP027804.1\|WP_045529555.1\|1415838_1416453_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_041217718.1\|1423651_1424119_-\|NUDIX-hydrolase	gnl\|CDD\|239647	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	5.23621e-68
NZ_CP027804.1\|WP_106552105.1\|1412626_1414660_+\|hypothetical-protein	gnl\|CDD\|372638	pfam13582, Reprolysin_3, Metallo-peptidase family M12B Reprolysin-like. This zinc-binding metallo-peptidase has the characteristic binding motif HExxGHxxGxxH of Reprolysin-like peptidases of family M12B.	2.91991e-34
NZ_CP027804.1\|WP_043159854.1\|1426572_1427979_-\|hexose-6-phosphate:phosphate-antiporter	gnl\|CDD\|236564	PRK09556, uhpT, hexose-6-phosphate:phosphate antiporter.	0
NZ_CP027804.1\|WP_106552108.1\|1424214_1425156_-\|pseudouridine-synthase	gnl\|CDD\|211334	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE. This group is comprised of bacterial proteins similar to E. coli RluE. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. Escherichia coli RluE makes psi2457 in 23S RNA. psi2457 is not universally conserved.	5.30038e-88
NZ_CP027804.1\|WP_039215278.1\|1418685_1419816_-\|cupin-domain-containing-protein	gnl\|CDD\|225406	COG2850, COG2850, Uncharacterized conserved protein [Function unknown].	3.09075e-120
NZ_CP027804.1\|WP_010673955.1\|1410831_1411176_+\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|182759	PRK10824, PRK10824, Grx4 family monothiol glutaredoxin.	6.34922e-73
NZ_CP027804.1\|WP_106552106.1\|1416452_1418072_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.05772e-28
NZ_CP027804.1\|WP_011705313.1\|1418104_1418626_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	1.90965e-50
NZ_CP027804.1\|WP_024943889.1\|1415161_1415800_+\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|235555	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase.	5.09672e-125
NZ_CP027804.1\|WP_011705316.1\|1422386_1423493_-\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_CP027804.1\|WP_106552109.1\|1425233_1426001_-\|PTS-transporter-subunit-EIIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	4.91696e-21
NZ_CP027804.1\|WP_106552112.1\|1430504_1432412_-\|PTS-transporter-subunit-EIIA	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	3.99423e-130
NZ_CP027804.1\|WP_076361245.1\|1425994_1426306_-\|PTS-fructose-transporter-subunit-IIB	gnl\|CDD\|224362	COG1445, FrwB, Phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism].	4.41141e-40
NZ_CP027804.1\|WP_106552111.1\|1428889_1430311_-\|hypothetical-protein	gnl\|CDD\|370244	pfam09013, YopH_N, YopH, N-terminal. The N-terminal domain of YopH is a compact structure composed of four alpha-helices and two beta-hairpins. Helices alpha-1 and alpha-3 are parallel to each other and antiparallel to helices alpha-2 and alpha-4. This domain targets YopH for secretion from the bacterium and translocation into eukaryotic cells, and has phosphotyrosyl peptide-binding activity, allowing for recognition of p130Cas and paxillin.	1.83784e-21
NZ_CP027804.1\|WP_073349496.1\|1411253_1412567_-\|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	gnl\|CDD\|223222	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].	2.57258e-81
NZ_CP027804.1\|WP_158704821.1\|1428467_1428881_-\|CesT-family-type-III-secretion-system-chaperone	gnl\|CDD\|341113	cd17030, T3SC_IA_SycH-like, Class IA type III secretion system chaperone protein, similar to Yersinia pestis SycH. This family includes type III secretion system (T3SS) chaperone proteins similar to Yersinia pestis SycH and similar proteins. In Yersinia pestis, the causative agent of bubonic and pneumonic plague, the T3SS allows injection of effector proteins, termed Yersinia outer proteins (Yops) into macrophages and other immune cells, forming pores in the host cell membrane and have been linked to cytolysis. The secretion of Yops is regulated by the activity of the YopN/SycN/YscB/TyeA complex. SycH is the chaperone for YopH, a potent eukaryotic-like protein tyrosine phosphatase that is essential for virulence. SycH also binds two negative regulators of type III secretion, YscM1 and YscM2, both sharing significant sequence homology with the chaperone-binding domain of YopH.	1.1759e-47
NZ_CP027804.1\|WP_106552113.1\|1433043_1433559_-\|AAA-family-ATPase	gnl\|CDD\|181235	PRK08118, PRK08118, DNA topology modulation protein.	7.49771e-20
NZ_CP027804.1\|WP_106552107.1\|1419981_1421352_-\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP027804.1\|WP_045529555.1\|1415838_1416453_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	6.07315e-45

>NZ_CP027804.1|WP_106552107.1|1419981_1421352_-|adenylosuccinate-lyase
MELSALTAVSPIDGRYGDKADALRPIFSEFGLLRFRVEVEVRWLQKLASHAGIPEVPALSAAASALLDGIVSNFNEQDAARIKQIERTTNHDVKAVEYFLKEKVEVNPELAAIAEFIHFACTSEDINNNSHGLMLKTAREEVIKPYCEKLISELKRLAVEYRDMPLLSRTHGQPATPSTMGKEMANVAYRLERQYKQIMAVEILGKINGAVGNYNAHISAYPDVDWHQFSEEFVTSLGLSWNPYTTQIEPHDYIAELFDAMARFNTILIDFDRDVWGYISLGHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVFQHLASKLPISRWQRDLTDSTVLRNLGVAVGYSLIAYQATLKGISKLEANDAAMAADLDANWEVLAEPIQTVMRRYGIEKPYEKLKELTRGRRVDAEGMRTFIDTLALPEAVKVELKKLTPANYIGDAQRLVDLLK
>NZ_CP027804.1|WP_039215278.1|1418685_1419816_-|cupin-domain-containing-protein
MYQLNLDIAHFLEHYWQKRPLLIKGGFTDFQDPISPDELAGLAMEEVIESRLVTRFNNKWEAAHGPFESYDHLGEENWTVLVQACNHWAPEVNELALPFQFIPGWRFDDVMVSFSTPHGGVGPHIDNYDVFITQGQGKRHWRVGDAKPLNEFAAHAALLHCEPFEAIIDVIMEPGDILYIPPGFPHEGYAIEPSLNFSVGFRAPDAKALISSFADHLIDNEVRTERYGDADLKPRARHGEIQPHELHRLRELMQQALDDETLFKEWFGTMISEAKHDLDVNPVEPDYSAEEVADLLTQGEPAIKVPGLRTVWFSGESQQCYIDGEAWTLPSEDAAAISLLCDKDMVTQADMVELADQAGFLQLLTRLVNRGYWFFS
>NZ_CP027804.1|WP_011705313.1|1418104_1418626_+|N-acetyltransferase
MLRTERPGDMLPVYDLVSAAFGRSDEAELVNRLRECGAAVVTMVEEEEYEFMGHLMLSPITINGMEGPWLGLAPVAVHPDWQGQGIGSDLVREGLDTALEMDWKAVVVLGDPTYYSRFGFRPASEFGLHCIYEVPADCFMAMELQEGGLTGMQGEVLYHPLFDELPDEAPLEA
>NZ_CP027804.1|WP_106552106.1|1416452_1418072_+|GNAT-family-N-acetyltransferase
MELLIERALWQPHWAPVLQAWQRQGGRWLLLQSKADEGLPSDTGGLWSCCPPDGVRSASSLLAAWLDGDLTAQPARDPSCQILISGSASLLTLAREEGLLTLGPQGADLTLTAQDDLGAVLNRLLARRLTVPVLAEPVLQSGPALQLRPLLACDEADVVRYCSDAALARYTLNIPHPYPPEAARDWLAGCWRKAALGLGWSWALTLPGGEGQAPLVGVISLHWNGELAWWVGVPWQNRGLATRAARLVKAFAFDRLQLPVLTARYMPGNLASGRVMAKLDMRYCGRRELSGQPPCEVSYWQLERSQTLAAPLARQLAPLLADERVVAAILQAGAEEGEPRRLALFLAQSGEPGSGLAVELLSEQEDNGPLAVEYHDQAVLAQAEPDQLYLYRGLLLKDHDEQGLAYLQQLASLQRQGPAPLTLAERRQRLGWLGTLARRASGENTQGNGVSRRYHQLWLLVELPALIDELAGRWHRGPDQTLSWLAQTDAELFAAYRAAIATLQPSDLQTLLRLLAVRFPESTLPFLDKGAQGGGQFVE
>NZ_CP027804.1|WP_045529555.1|1415838_1416453_+|glutathione-S-transferase-family-protein
MRLYGDLKSGNCYKPWLLARWLELPLEWVPVDVLAGETRTPDFLAINPNGKIPVLELAQGDTLAESNAILFYLAQGSSLWPTEPRQQAEVLKWLFFEQYSHEPYIAVARFIVHYLGRPESQEARLDGLKAGGEKALAVLEQQLKQSPYLCGDSPTIADIGLYAYTHVAEEGIFSLQGWPAIRDWIARIEAHPRHLSLPAACQAG
>NZ_CP027804.1|WP_024943889.1|1415161_1415800_+|pyridoxamine-5'-phosphate-oxidase
MMDVADLRREYTRGGLHRADLPTEPLALFEKWLAQACEAKLTDPTAMVVGTVDADGQPWQRTVLLKHYDAEGMVFYTNMGSRKAHQLEGNPRISLLFPWHTLDRQVHVTGRVEKMSTFEVMKYFHSRPKDSQIAAWVSQQSTRISARGVLEAKFLELKQKFANGEVPLPSFWGGFRVRIDTVEFWQGGEHRLHDRFYYTREGEGWHIERLAP
>NZ_CP027804.1|WP_024943890.1|1414656_1414980_+|hypothetical-protein
MRAGWLVLVSLLGGCQADADTLEQAVSASLAKQDYRLIVRAGRGEVAPGIAPEQQASAKARCGVRYLDGLGDVIKPGQEEAQAKLAAYAADYNRRMLAHCPAASGKQ
>NZ_CP027804.1|WP_106552105.1|1412626_1414660_+|hypothetical-protein
MMPVAVWVSAFKRTKKMQLMKFSPLALVVASLMSSGGLSAKEWDTVAARASAADGYEVRANQFRVAKVPIDYFAGLQAGVRSLILPLPDGGEVTFTLQAYDLLPADQAAKFPEILTFKGHNPAAPVESGRFDLGPLGFHAMFTHQGKTVFVDPLRNADGYAVYYQQDAYSRLEEDADKVIGSEASRALAHKVQVDGNVRKRYVIAISAAGEYTQFHGGSKVLATAAIATLLNRVNEVYQRDVGAEFQLASGNDNIIFTDPASDPFTNGDADVDINSVVQANAQTLPSAPLGQFDIGHVVNTGGGGLANLGALCTATRSQGMTGSATPVGDAFFIDYVAHEIGHQFGADHTFNGTTNSCGSGNREATQAWEPGSGTSIMAYAGICGDENIQPHSDPYFHSKSIEQMRAHMATVPACGTTLNLVNNAPQAAAGASRIIPANTPFVLKGAGADLDGDPLTYTWEQIDLGTESSSPATMVDDGSRPLFRFVSPTSSAERILPSLPSLLSGMLAKGEAWPTTNRDLNFRLTVRDGKGGVASDDMKVQVVNTGSAFRLTAPLGVALTPGASQAVSWDVAGTTLAPISCSKVDLFITQNEGASWSNLAVSQPNSGAATVTLPADLASAARLKVACSDNIFFAISPAKLPVVQSGGSSGGGGGGGGALGLWTLALALLGWQRRRG
>NZ_CP027804.1|WP_073349496.1|1411253_1412567_-|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase
MHQPCLAPIIARIYQFLSRVTMTTVRLYLTKVNLMLKSPLLPRFGDLVVAIVDDVLGQGLTLDRAYARHFSGIELKPQEQARIALVTGDLLRRLSLYCALTGIQVRQAEKNVWPLLHSWHAFHKIAQPNHPTLDRFNEEAFRRRLTEAKKNPVLMDGCPTWLEKLGSEQLGEAWPAERAALAWMPKRYLRVNSLKCTREELQAALAKEQVTTIPVEGVDSALQVTSDAALFRTKAFADGWFEQQDAGSQQVAAALEVSPGMRVIDACAGAGGKTLHLAAMMEGKGRLLAMDVEEWKLENLKQRARRAGAHNVETRVITSSKTVKRLKESADRVLLDVPCSGLGVLKRNPDAKWRDTAERLPVLVALQAEILQRYSQMVKVGGLLVYATCSILPEENRQQVDKFLAANENYRLRDDHTVSPAATGFDGFYMARIERIA
>NZ_CP027804.1|WP_010673955.1|1410831_1411176_+|Grx4-family-monothiol-glutaredoxin
METIEKIKQQLAENPIILYMKGSPKLPSCGFSAQASQALMSCGEPFAYVDILQNPDIRAELPKFANWPTFPQLWVEGELVGGCDIMIEMFQAGELQTLIKETAAKHKQDDAAAE
>NZ_CP027804.1|WP_011705316.1|1422386_1423493_-|tRNA-2-thiouridine(34)-synthase-MnmA
MTDNSQIKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDTDEYCSAAQDLADAKAVCDKLGMKLHTINFAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEELGATYIATGHYVRRDDSTGRPRLLRGLDTNKDQSYFLYTLSEAQVGQSLFPVGDLEKPEVRRIAEQLDLITAKKKDSTGICFIGERKFKDFLAKFLPAQPGPIETVDGKVIGEHQGLMYHTLGQRKGLGIGGRKDATEEAWYVVDKEVERNTLVVAQGEHPRLYSDGLIASQLHWVDRTPIRAPRRCTVKTRYRQEDIPCLIQPIDDETIRVIFDEKQAAVTPGQSAVFYDGEVCLGGGIIEQRFSHPV
>NZ_CP027804.1|WP_041217718.1|1423651_1424119_-|NUDIX-hydrolase
MSDHPPLPTRLTVAALVHWQGRFLLVEEEIKGQRRFNQPAGHVEPGEDLIQAACRELKEETGLTAAPTAWLGVYLYKPADSEATFVRTAVIFDLEKAPGQHHPEDPDGDVLACHWLTLAEIAECKPALRSPLVWQCIQDYLAGTRLPLSALKAFI
>NZ_CP027804.1|WP_106552108.1|1424214_1425156_-|pseudouridine-synthase
MHAMKSARPRLSLSARPDAGRTAKGPATARPSQRRKAQHVMRDKEGERKPAPTPADRKLLLLNKPYMVLCQFTDEAGRETLKDYITEPDIYAAGRLDRDSEGLLLLTNDGKLQARLTQPGEKTPKTYWVQVEGVPSEEKLAALRTGVELNDGMTLPAGARIMEEPAVWPRNPPIRMRKEIPTCWLEIKIVEGRNRQVRRMTAHIGHPTLRLIRYAIGEWTLDGLAPGESRALPAPELAPAPRPTATQGKARTSAKPQGTGSHSAPRAARRPQHQGQEQAPGQGRGNREAEPRPGHRSGGRGTARRPARSKPSE
>NZ_CP027804.1|WP_106552109.1|1425233_1426001_-|PTS-transporter-subunit-EIIA
MLIREISFHCRLGLTITQAKQLSRLAGLFKSHIQFINVTRRQAVEATNQLSLLTLATQPGDLCLLLIEGLDAELAHMAFTCWCVELGQPLGRPGSAALAEQRLGQALPDYCFTLAQLGHATAPLDKAQALAVLVDLLPAALISDRPALEQAIAAREQLAATIIRPGLAMPHVICPAIRRPALSLLSSSEPIEWGSALGPVQTLILLAVPTGLAPEQLRPLTRLARALMDEQVGTALLHASSPPARQAIVIDGLLG
>NZ_CP027804.1|WP_076361245.1|1425994_1426306_-|PTS-fructose-transporter-subunit-IIB
MKILAVTACPTGIAHTYMAAEALQKAADKLGLKIKVETQGAMGLENILTARDIAGADLVLIASDIEIEQKDRFLGCPIHQVALEAVLLDAVAVLKTAAPASEC
>NZ_CP027804.1|WP_043159854.1|1426572_1427979_-|hexose-6-phosphate:phosphate-antiporter
MFKLLEQVRVPTLNLPVEARRKLWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMIQEYGLSMTELGMIGLGFSITYGVGKTIVSYYADGKNTKQFLPLMLILSSLCMLGFSASMGGTGFSLYLMIFFYAASGFFQSCGGSCSYSTITKWTPRNKRGTYLGMWNLSHNVGGAGAAGVALFGANYLFDGNVLGMFIFPSIIALIVGFIGLRFGSDSPEAYGLGKVEELFDEVASEEDIATEEQQLTKWQIFVKYVLMNKVIWLLCFANIFLYVVRIGIDQWSTVYAHQELGFSKEVAIQGFTFFEVGALVGTLMWGYLSDLANGRRGLVACVALALIIATLGLYQHATTQFMFLGSLFLLGFLVFGPQLLIGVAAVGFVPKQGISVADGVKGTFAYLIGDSFAKLGLGMIADGTPIFGLTGWTGTFAALDMAAAACLVLMACVAVAEERKIRRIKRELKAATLATQSV
>NZ_CP027804.1|WP_158704821.1|1428467_1428881_-|CesT-family-type-III-secretion-system-chaperone
MNLYTTRLGELAAHLDIGAIEQDETGHACLTLDKLWAIHLAPLGEESMVMFLRAGTLAGEVQARALLRGNLFSAEHTIIRVALGQDDHLILWCQQRLESTNAEQLHQALGQLVARAVALTGEMDAPSSASIPPSLRV
>NZ_CP027804.1|WP_106552111.1|1428889_1430311_-|hypothetical-protein
MQIHALQSLVNQQINQLGHADQAGRLGNQGHTNTGAGISSQERTFAQTVLEQVRNISLNQQEVAGLLPHIANFKLQQETGGNAVLAGLRSDQLSLADAKLLLDAAARQLPPPVPDRAAKPAPAIPARPQNNTVDLCHHFAGQDVQVLANKPAPGTNTAAIWPSASKPGQFGIFLPGEGMKHAPTLADAKSQLSAYNASQLTKQLEARWGGAVSVLAEKPAASFDRPAIWPSASKPGSYGIHLPGKSAMRAEDLAKADSLFAKNGVAVRLSDGQHIKVNGTNLPEAARVSLERQHQIAITPITINGKEIAYLFSGQQQLNRNVLFSSHGSGVNEGTFTKPEGIEFDFASTRNNVLVSNTMAFAEKLKDGLVAFKEESQIYDTLSREATNYRLDGGIRTQPEQAAELIGRMNRNGADQPFDFVLLNREAKGVHFADLLQGFKDTLGWLPDQLVCHFCRPQDENKGRFNVSNNYLG
>NZ_CP027804.1|WP_106552112.1|1430504_1432412_-|PTS-transporter-subunit-EIIA
MITTLINEQLIALDLKATSKEEVFTEMTRLLAAQGKVSDEQQFIKDLWAREELDNTGFEEGVALPHAKSAAVSTPAVAIGISRAGIEYGAEDGKPSRLFFMIASPAGGANHHIEVLAELSAKLIEEGFIDALLAAKTPTDALALLLEKKEPPVAAPAANKGLIIGVTGCPAGIAHTYLAAESLERAAKELGYEVKVETNGSIGVKNSPTAAEIARASAIVVACDKQVDMARFNGKPLIKTGVKAPIKDGKGLIEQALKAPAYVADKDERKSEEKSSGSSSDLYRYLMNGVSHMIPFVVTGGLLIALALAIGGDPTPSGMQIPAGSMWNQILNVGVAAFTLMIPILAGYIAYAIGDRPALAPGFIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYLVRWIATRHYHKMVQPLVPILIAPIVGSLFIAAVFIFIIGAPIADMMTGLNAMLLSMSGGSLVLLGIVLGGMAGFDMGGPVNKVAFLFSVGMIASGQTQFMGAMACAIPAAPLGMSLATVLGRKLGIFDATEIEAGKAAGAMGLVGISEGAIPFAARDPLAVIPANVLGSMTAAVMAFLFGITNSVAHGGPIVALLGAVNKPLLALLCMICGAIVTGVVAVALKKLRVKKSDEVTLAKAA
>NZ_CP027804.1|WP_106552113.1|1433043_1433559_-|AAA-family-ATPase
MKRILIIGNSGSGKSGLTARLAERLTIREVNLDTIVWQPGGFNQKRPQHEIDQAIQTLAQEPSWVVEGVFGTLAEQLLDAADTLLFLDLDWSVCRDSLLSRGSQSARQRDAMAAEKNFQQLLVWASEYGQRASKSSRQSHRELFDRFPNAKHRFTTRAEVNSYLTQLTTHS

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Crispr_ID: NZ_CP027804_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_5

1436060-1436172

Orphan

Consensus_repeat	Method
GGTTTGCTGGTGAGCGGTGACGATATGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_5

>merge|NZ_CP027804|5|1436060-1436172|CRISPRCasFinder
GGTTTGCTGGTGAGCGGTGACGATATGGCGGGTGGGGGCAAGCTCGGGCTTGCCCAGCCAACTCAAGCCGACGCCCGCTTCTGTGGTTTGCAGGTGAGCGGTGACGATATGGC

>NZ_CP027804|5|5|1436060-1436172|CRISPRCasFinder
GGTTTGCTGGTGAGCGGTGACGATATGGC	GGGTGGGGGCAAGCTCGGGCTTGCCCAGCCAACTCAAGCCGACGCCCGCTTCTGT
GGTTTGCAGGTGAGCGGTGACGATATGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_106552115.1\|1435086_1435563_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP027804.1\|WP_106552109.1\|1425233_1426001_-\|PTS-transporter-subunit-EIIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP027804.1\|WP_106552120.1\|1441291_1441579_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_011705336.1\|1446685_1447576_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP027804.1\|WP_043159854.1\|1426572_1427979_-\|hexose-6-phosphate:phosphate-antiporter	unknown	unknown	gnl\|CDD\|236564
NZ_CP027804.1\|WP_106552111.1\|1428889_1430311_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370244
NZ_CP027804.1\|WP_158704821.1\|1428467_1428881_-\|CesT-family-type-III-secretion-system-chaperone	unknown	unknown	gnl\|CDD\|341113
NZ_CP027804.1\|WP_106552112.1\|1430504_1432412_-\|PTS-transporter-subunit-EIIA	unknown	unknown	gnl\|CDD\|182066
NZ_CP027804.1\|WP_106552122.1\|1444625_1445324_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106553747.1\|1433643_1434657_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225232
NZ_CP027804.1\|WP_106552119.1\|1440411_1441200_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106552121.1\|1441779_1443666_-\|PTS-fructose-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|182490
NZ_CP027804.1\|WP_106552116.1\|1436209_1437247_-\|Mal-regulon-transcriptional-regulator-MalI	unknown	unknown	gnl\|CDD\|182193
NZ_CP027804.1\|WP_011705333.1\|1444401_1444551_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106552117.1\|1437520_1439107_+\|PTS-maltose-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|182245
NZ_CP027804.1\|WP_019839597.1\|1435617_1435881_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106552113.1\|1433043_1433559_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181235
NZ_CP027804.1\|WP_076361245.1\|1425994_1426306_-\|PTS-fructose-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|224362
NZ_CP027804.1\|WP_106552123.1\|1445371_1446571_-\|mannose-6-phosphate-isomerase,-class-I	unknown	unknown	gnl\|CDD\|185085
NZ_CP027804.1\|WP_106552118.1\|1439181_1440384_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|224090

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_106552115.1\|1435086_1435563_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.86886e-10
NZ_CP027804.1\|WP_106552109.1\|1425233_1426001_-\|PTS-transporter-subunit-EIIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	4.91696e-21
NZ_CP027804.1\|WP_011705336.1\|1446685_1447576_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	6.25965e-28
NZ_CP027804.1\|WP_043159854.1\|1426572_1427979_-\|hexose-6-phosphate:phosphate-antiporter	gnl\|CDD\|236564	PRK09556, uhpT, hexose-6-phosphate:phosphate antiporter.	0
NZ_CP027804.1\|WP_106552111.1\|1428889_1430311_-\|hypothetical-protein	gnl\|CDD\|370244	pfam09013, YopH_N, YopH, N-terminal. The N-terminal domain of YopH is a compact structure composed of four alpha-helices and two beta-hairpins. Helices alpha-1 and alpha-3 are parallel to each other and antiparallel to helices alpha-2 and alpha-4. This domain targets YopH for secretion from the bacterium and translocation into eukaryotic cells, and has phosphotyrosyl peptide-binding activity, allowing for recognition of p130Cas and paxillin.	1.83784e-21
NZ_CP027804.1\|WP_158704821.1\|1428467_1428881_-\|CesT-family-type-III-secretion-system-chaperone	gnl\|CDD\|341113	cd17030, T3SC_IA_SycH-like, Class IA type III secretion system chaperone protein, similar to Yersinia pestis SycH. This family includes type III secretion system (T3SS) chaperone proteins similar to Yersinia pestis SycH and similar proteins. In Yersinia pestis, the causative agent of bubonic and pneumonic plague, the T3SS allows injection of effector proteins, termed Yersinia outer proteins (Yops) into macrophages and other immune cells, forming pores in the host cell membrane and have been linked to cytolysis. The secretion of Yops is regulated by the activity of the YopN/SycN/YscB/TyeA complex. SycH is the chaperone for YopH, a potent eukaryotic-like protein tyrosine phosphatase that is essential for virulence. SycH also binds two negative regulators of type III secretion, YscM1 and YscM2, both sharing significant sequence homology with the chaperone-binding domain of YopH.	1.1759e-47
NZ_CP027804.1\|WP_106552112.1\|1430504_1432412_-\|PTS-transporter-subunit-EIIA	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	3.99423e-130
NZ_CP027804.1\|WP_106553747.1\|1433643_1434657_-\|hypothetical-protein	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	2.48898e-23
NZ_CP027804.1\|WP_106552121.1\|1441779_1443666_-\|PTS-fructose-transporter-subunit-EIIC	gnl\|CDD\|182490	PRK10478, PRK10478, PTS fructose transporter subunit EIIC.	3.92951e-146
NZ_CP027804.1\|WP_106552116.1\|1436209_1437247_-\|Mal-regulon-transcriptional-regulator-MalI	gnl\|CDD\|182193	PRK10014, PRK10014, DNA-binding transcriptional repressor MalI; Provisional.	0
NZ_CP027804.1\|WP_106552117.1\|1437520_1439107_+\|PTS-maltose-transporter-subunit-IICB	gnl\|CDD\|182245	PRK10110, PRK10110, PTS maltose transporter subunit IICB.	0
NZ_CP027804.1\|WP_106552113.1\|1433043_1433559_-\|AAA-family-ATPase	gnl\|CDD\|181235	PRK08118, PRK08118, DNA topology modulation protein.	7.49771e-20
NZ_CP027804.1\|WP_076361245.1\|1425994_1426306_-\|PTS-fructose-transporter-subunit-IIB	gnl\|CDD\|224362	COG1445, FrwB, Phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism].	4.41141e-40
NZ_CP027804.1\|WP_106552123.1\|1445371_1446571_-\|mannose-6-phosphate-isomerase,-class-I	gnl\|CDD\|185085	PRK15131, PRK15131, mannose-6-phosphate isomerase; Provisional.	2.05588e-163
NZ_CP027804.1\|WP_106552118.1\|1439181_1440384_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	3.20309e-154

>NZ_CP027804.1|WP_019839597.1|1435617_1435881_-|hypothetical-protein
MSNPHDQNPPSEIHRCDKCRERTRHIVVLVPRDHSQDIMPKDPRKAFWQAFRSSSLTNAVFGQTLAYQATHVKHLICERCGEKFLEY
>NZ_CP027804.1|WP_106552115.1|1435086_1435563_-|GNAT-family-N-acetyltransferase
MMFVEMTPGQLPLALLLEADPAEQRIAAYLPGAWGFAALVGNEVVGACVAGLMGEQTAEIFNIAVAPNRQQQGIGSGLLRFVLTSLAGKGVCRVELGTGSFGYQLTYYQRHGFRVDAIIKDHFLTHYTEPLMEHGIQHRDMLRLSLVLEPNPPLHSGQ
>NZ_CP027804.1|WP_106553747.1|1433643_1434657_-|hypothetical-protein
MIWNDNPKHIRKFHENKQMYSIMCDEVKFILTKSILSANIEVASITARTKTEASFCEKIHRKNYKDPFHEITDFSGARIVFLYASDRGKLETIIENEFKVIEKADKVQGSDVDQFGYGALHYLVKLKSDYLKARYPELENLLCEIQVRTILQDAWAVVAHHLSYKQESDIPQHLRRKLNALSGLFETADDQFETIRELRSKYQKSVSEKIENNQEESLESEIELDNLKAYLSWKFPNRKKSDSSTMSEAIHELKSFGYTTLKQLDEIIEQALEAAEAYEEKYPPYDPDEHEDTSYTQIGIVRVSLEFVDHKYLERAEISNSWQEKKLEFSHLVKRQS
>NZ_CP027804.1|WP_106552113.1|1433043_1433559_-|AAA-family-ATPase
MKRILIIGNSGSGKSGLTARLAERLTIREVNLDTIVWQPGGFNQKRPQHEIDQAIQTLAQEPSWVVEGVFGTLAEQLLDAADTLLFLDLDWSVCRDSLLSRGSQSARQRDAMAAEKNFQQLLVWASEYGQRASKSSRQSHRELFDRFPNAKHRFTTRAEVNSYLTQLTTHS
>NZ_CP027804.1|WP_106552112.1|1430504_1432412_-|PTS-transporter-subunit-EIIA
MITTLINEQLIALDLKATSKEEVFTEMTRLLAAQGKVSDEQQFIKDLWAREELDNTGFEEGVALPHAKSAAVSTPAVAIGISRAGIEYGAEDGKPSRLFFMIASPAGGANHHIEVLAELSAKLIEEGFIDALLAAKTPTDALALLLEKKEPPVAAPAANKGLIIGVTGCPAGIAHTYLAAESLERAAKELGYEVKVETNGSIGVKNSPTAAEIARASAIVVACDKQVDMARFNGKPLIKTGVKAPIKDGKGLIEQALKAPAYVADKDERKSEEKSSGSSSDLYRYLMNGVSHMIPFVVTGGLLIALALAIGGDPTPSGMQIPAGSMWNQILNVGVAAFTLMIPILAGYIAYAIGDRPALAPGFIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYLVRWIATRHYHKMVQPLVPILIAPIVGSLFIAAVFIFIIGAPIADMMTGLNAMLLSMSGGSLVLLGIVLGGMAGFDMGGPVNKVAFLFSVGMIASGQTQFMGAMACAIPAAPLGMSLATVLGRKLGIFDATEIEAGKAAGAMGLVGISEGAIPFAARDPLAVIPANVLGSMTAAVMAFLFGITNSVAHGGPIVALLGAVNKPLLALLCMICGAIVTGVVAVALKKLRVKKSDEVTLAKAA
>NZ_CP027804.1|WP_106552111.1|1428889_1430311_-|hypothetical-protein
MQIHALQSLVNQQINQLGHADQAGRLGNQGHTNTGAGISSQERTFAQTVLEQVRNISLNQQEVAGLLPHIANFKLQQETGGNAVLAGLRSDQLSLADAKLLLDAAARQLPPPVPDRAAKPAPAIPARPQNNTVDLCHHFAGQDVQVLANKPAPGTNTAAIWPSASKPGQFGIFLPGEGMKHAPTLADAKSQLSAYNASQLTKQLEARWGGAVSVLAEKPAASFDRPAIWPSASKPGSYGIHLPGKSAMRAEDLAKADSLFAKNGVAVRLSDGQHIKVNGTNLPEAARVSLERQHQIAITPITINGKEIAYLFSGQQQLNRNVLFSSHGSGVNEGTFTKPEGIEFDFASTRNNVLVSNTMAFAEKLKDGLVAFKEESQIYDTLSREATNYRLDGGIRTQPEQAAELIGRMNRNGADQPFDFVLLNREAKGVHFADLLQGFKDTLGWLPDQLVCHFCRPQDENKGRFNVSNNYLG
>NZ_CP027804.1|WP_158704821.1|1428467_1428881_-|CesT-family-type-III-secretion-system-chaperone
MNLYTTRLGELAAHLDIGAIEQDETGHACLTLDKLWAIHLAPLGEESMVMFLRAGTLAGEVQARALLRGNLFSAEHTIIRVALGQDDHLILWCQQRLESTNAEQLHQALGQLVARAVALTGEMDAPSSASIPPSLRV
>NZ_CP027804.1|WP_043159854.1|1426572_1427979_-|hexose-6-phosphate:phosphate-antiporter
MFKLLEQVRVPTLNLPVEARRKLWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMIQEYGLSMTELGMIGLGFSITYGVGKTIVSYYADGKNTKQFLPLMLILSSLCMLGFSASMGGTGFSLYLMIFFYAASGFFQSCGGSCSYSTITKWTPRNKRGTYLGMWNLSHNVGGAGAAGVALFGANYLFDGNVLGMFIFPSIIALIVGFIGLRFGSDSPEAYGLGKVEELFDEVASEEDIATEEQQLTKWQIFVKYVLMNKVIWLLCFANIFLYVVRIGIDQWSTVYAHQELGFSKEVAIQGFTFFEVGALVGTLMWGYLSDLANGRRGLVACVALALIIATLGLYQHATTQFMFLGSLFLLGFLVFGPQLLIGVAAVGFVPKQGISVADGVKGTFAYLIGDSFAKLGLGMIADGTPIFGLTGWTGTFAALDMAAAACLVLMACVAVAEERKIRRIKRELKAATLATQSV
>NZ_CP027804.1|WP_076361245.1|1425994_1426306_-|PTS-fructose-transporter-subunit-IIB
MKILAVTACPTGIAHTYMAAEALQKAADKLGLKIKVETQGAMGLENILTARDIAGADLVLIASDIEIEQKDRFLGCPIHQVALEAVLLDAVAVLKTAAPASEC
>NZ_CP027804.1|WP_106552109.1|1425233_1426001_-|PTS-transporter-subunit-EIIA
MLIREISFHCRLGLTITQAKQLSRLAGLFKSHIQFINVTRRQAVEATNQLSLLTLATQPGDLCLLLIEGLDAELAHMAFTCWCVELGQPLGRPGSAALAEQRLGQALPDYCFTLAQLGHATAPLDKAQALAVLVDLLPAALISDRPALEQAIAAREQLAATIIRPGLAMPHVICPAIRRPALSLLSSSEPIEWGSALGPVQTLILLAVPTGLAPEQLRPLTRLARALMDEQVGTALLHASSPPARQAIVIDGLLG
>NZ_CP027804.1|WP_106552116.1|1436209_1437247_-|Mal-regulon-transcriptional-regulator-MalI
MSPKSLSAKTTKITDVAQWAGVSVTTVSMVLNGKGRISPATAERVQQAIRALDYVPNSAAANLRSQQSNLVGLILRDITDPFYTEVTAGVSEVLEQQGYLLFLTQCGHSPERLQQSIQSLSRQGVAGIIFNPVRGAAAKPLEHLLDSALPLVCAARSYYRDDVDFIGPDNTHAAQQATTYLIEQGHRHIAYVGGRADSLTRAERIGGYCASLLQYGLPFKPEWVLECERTQRSAADTIAQLLHQHPKVTAVLCHYPEVALGGIYGVEASGRSVGKDNYIGQQVALLGFDDVAEAELTSPALTFVSSPAREIGRQAALRLLTRMQQPELAPTRHIITPSLQKRASA
>NZ_CP027804.1|WP_106552117.1|1437520_1439107_+|PTS-maltose-transporter-subunit-IICB
MAKSPAKSTIWEFLQSLGKTFMLPVALLAFSGILLGVGSSLTSDAVKQSMPFLDNTVLQLLFLWMTKVGLVAFIYLPVMFAVAIPLGLAREEKGVAAFAGFVGYAALNLSINFYLTVANVIGDAAAEKTYGVKAILGISSIDTGILGAIIVGVIVAKLHARFYTYQMPDALAFFGGARFVPIITAIVLGVVGLVVPLVWPWFAAGINGIGTLISHAGPFGPFLFGTGERLLLPLGLHHILVALIRFTEAGGTSLVCGNEVSGALNIFYAELSCADTTQFSVSATSFLSQGKMPAFLGGLPGAALAMYHCTRPENRGKIKALLVSGVVACVIGGITEPLEFLFLFVAPVLYVIHAILTGLGFMTMGLLGVTIGNTDGNLIDFLVFGVLQGTATKWYLVPVAAAIWFAIYYGVFRFAIVRFNLKTPGREKESREIEASEAAQPAGKKAGNSGYNGEVILNALGGADNILALDNCITRLRMSVQDMSRVDDKVLKANGAIGVIKLDEHNLQVVIGPQVHLVKNQLQSLMGV
>NZ_CP027804.1|WP_106552118.1|1439181_1440384_+|pyridoxal-phosphate-dependent-aminotransferase
MANTDSFDFDRVVDRHGTYCTQWDYVADRFGHADLLPFTISDMDFETAPCIRAALAKRLEHGVFGYSRWNHDDFKGAVSDWFASRYGAQLDPDTLVYGPSVIYIIAQLVSLWSAPGEGVLVHTPAYDAFGNMLAANDRVLLPCPLKKTEGGYQVDWTCFEQQAARPDCRILLLCSPHNPTGRVWTRDELCRMAAICQRHGVKVISDDIHMDVSFARYLPWSKVALDDHWALVSSGSKSFNIPALGGAYAFIANAEARAGYLQRLKAAHGLSSPPILGVLAHISAYRDGAVWLDALKRYLHGNLTQMAARLNTAFPAIDYRVPEGTYLAWIDLRGLGIDSTERMDALQTLLVEKYRVAIMRGDTYGPEGTGYLRLNVGCPRSKVDKGLDALISALQELLAR
>NZ_CP027804.1|WP_106552119.1|1440411_1441200_-|hypothetical-protein
MTPNLDLNTLRRRWLKKHLQELRAAKDEEKEKGGILGFIGILCALIPLLTAAVYFVGMRYYQGYLGQFRLDSTEFSPPADNTLFTGFYLLIQLLLPYVVPVIAALGTLFLTLFAMLFTVRWRLTLSWWVIRFFVLTPLVLKGGKIANNYPAPLTFNIMLWLKSSIFKLAIFIVPPLLVIIASEHLKPMGEELAQKQIDQLEQDKWPQTEAHSQSLLLGDKPHIRIACNASHCAYRLKGGDTLILRFDQIEETRYRPAKAASK
>NZ_CP027804.1|WP_106552120.1|1441291_1441579_-|hypothetical-protein
MELTDVLLSLAGLVTAGIILKNRAVTQPDWDKLPTLPEYLARHPECATDDSENASCCACGSHKVLFQPLTGAGDYRLRHTCLACGKVLFRSRAIL
>NZ_CP027804.1|WP_106552121.1|1441779_1443666_-|PTS-fructose-transporter-subunit-EIIC
MLTTLIDEGLICLDLAARDKQALFVELAARLKASGKIASQDQFVRDLWAREELDNTGFEQGVALPHAKSEAVREPAIVVGISRQGIDYGAEDGEPSKLFFMIASPAGGANHHIEVLAELSTKLLEPGFITSMQAATSRAEVLALLAAPGPSAAPVAPQAQPAQPAEPQERGIKAQLNTLKQHLLFGTSHMIPFIVAGGVLLSLSVMISGKGAVPEAGVLKDMADMGIAGLTLFTAVLGGYIAYSMADKPGLAPGMIGSWIAVQQFHTGFLGAILVGFIAGLIVNQLKRIKLPDSMSSLGSIFIYPLIGTFLVCGIVMWVIGAPIAAMMEGMNHWLSGMAGSGKVMLGAILGGMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAICVPPLGMALATLMSPKRYKKEEREAGKAAAIMGMIGISEGAIPFAAADPVRVIPAIVAGGIVGNITGFMMHSINHAPWGGWIVLPVVEGKMGYILGTLLGALTTALIVNLLKKPVSDTEESNERQEEYQIIEAEGEAEVLAITACPSGVAHTFLAAKSLQKAAAKAGIKLKVETQGANGIINRITPKDVANARCVIFAHDVAIKNKERFAHIEVIDVKTREAIHNPEGLLARTQPGRQVA
>NZ_CP027804.1|WP_011705333.1|1444401_1444551_+|hypothetical-protein
MEKLVQEIDTMREEFKQQERKQAHDKWQARVEELQQIRAEEPQPEAVEE
>NZ_CP027804.1|WP_106552122.1|1444625_1445324_-|hypothetical-protein
MFFDGLSHYAALPSADKFLDVRHKFIRSCCRPLPGWLSCPSGYHCALTLAGATTVIRHQFRKNIMKGYCGLSVLLLALLGSPVHAACDKGVALRLAKAFWSEHKDFYYADPAPLKALLTPDFFAVLSSEAACNADGEVCAIDADPWINAQDGEVSEPVSFTLANAQEQGVTVRMKYLFALSDSQKEPQTVSLHFQKSGDNRCYLMDDFIPPGDGSLKQRLRQWQSHNAIEPQ
>NZ_CP027804.1|WP_106552123.1|1445371_1446571_-|mannose-6-phosphate-isomerase,-class-I
MSSRDLPSFLSMQNPIQGYDWGSHDALTTLFGIPNPAGKPQAELWMGAHPNGCSEVVLAGQAQKLSTLIKSAPAAVLGEATQTRFGNLPFLFKVLCAEKALSIQVHPSKAQAEAGFAKEEAAGIPPTAANRNYKDPNHKPELVFALTPYQAMNGFRAIPAILALFERVKLPALAELVAALAASQNEAGLQHFFHQLLVLEGARKEEALAGLLAFAAAHQDEETFALVTSLAAQYPGDVGLFSPLLLNVVTLQPGQAMYLDACTPHAYVRGTGLEIMANSDNVLRAGLTPKYIDVAELLACTRCLPKPDHQILLAPRMEGAVQHFEVPVPDFTFSVYPAGEHQLTTTSAEILFAIDEAVILKRGDDTLRLEKGLSAFIPAATGRYQLLAEGRVARAGNRC
>NZ_CP027804.1|WP_011705336.1|1446685_1447576_+|helix-turn-helix-transcriptional-regulator
MIRISMSLVFSQLLDGALHEQAPFDQIWFAQDQGVPPGFSYQVNFPRLELVFSGEYRNQIWDREQGCQEICIAPGQALYIPPNGWNKPLWTTDCSVLSLLFGKRQLGFSLVSKRREDPDFFDVQKHSIMARAGHVNEHILAALNVLTEDPARSPTDNHLLQALLTSVRQLLAESTFERPRGAELFHGICIYIQENFHRPISRDSIAHRFNVSASHLSHLFREQGHMRLADYISWVRIDRAKFMLKKYRFRLEEVASRCGYSDVNYFCRVFKQKTGLTPSQYRALSQPQGQAEGLAG

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Crispr_ID: NZ_CP027804_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_6

1954113-1954252

Orphan

Consensus_repeat	Method
GCCACGCTCTGGGTCTCGATCACGGTGTTTTCGTTGCGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_6

>merge|NZ_CP027804|6|1954113-1954252|CRISPRCasFinder
GCCACGCTCTGGGTCTCGATCACGGTGTTTTCGTTGCGATGGTTAAAAATGGCGTGACGTCTGTCCACTCCGTCGATCACCACATTCAGGTGCCATCAGGCCACGCTCTGGGTCTCGATCACGGTGTTTTCGTTGCGATG

>NZ_CP027804|6|6|1954113-1954252|CRISPRCasFinder
GCCACGCTCTGGGTCTCGATCACGGTGTTTTCGTTGCGATG	GTTAAAAATGGCGTGACGTCTGTCCACTCCGTCGATCACCACATTCAGGTGCCATCAG
GCCACGCTCTGGGTCTCGATCACGGTGTTTTCGTTGCGATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_016351032.1\|1950874_1952062_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182964
NZ_CP027804.1\|WP_106552342.1\|1945874_1946939_-\|carotenoid-1,2-hydratase	unknown	unknown	gnl\|CDD\|227908
NZ_CP027804.1\|WP_106553765.1\|1956545_1959449_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271332
NZ_CP027804.1\|WP_106552345.1\|1952113_1953397_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370749
NZ_CP027804.1\|WP_158704828.1\|1969072_1969810_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_158704825.1\|1961063_1964864_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_158704826.1\|1966615_1967680_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214687
NZ_CP027804.1\|WP_106552340.1\|1940301_1943094_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP027804.1\|WP_106552348.1\|1959531_1959981_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106552343.1\|1946935_1949383_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|225669
NZ_CP027804.1\|WP_158704824.1\|1944334_1945432_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_011706367.1\|1955727_1956546_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|272930
NZ_CP027804.1\|WP_106552344.1\|1949404_1950085_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP027804.1\|WP_016351033.1\|1950282_1950750_+\|DUF4357-domain-containing-protein	unknown	unknown	gnl\|CDD\|379529
NZ_CP027804.1\|WP_106552346.1\|1953503_1954076_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106552341.1\|1943228_1943789_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_158704827.1\|1967666_1968101_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183873
NZ_CP027804.1\|WP_106552349.1\|1965077_1966619_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_011706364.1\|1960098_1960584_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179964
NZ_CP027804.1\|WP_106553766.1\|1969797_1970304_-\|TM2-domain-containing-protein	unknown	unknown	gnl\|CDD\|377473

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_016351032.1\|1950874_1952062_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182964	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter.	5.1879e-151
NZ_CP027804.1\|WP_106552342.1\|1945874_1946939_-\|carotenoid-1,2-hydratase	gnl\|CDD\|227908	COG5621, COG5621, Predicted secreted hydrolase [General function prediction only].	1.44604e-85
NZ_CP027804.1\|WP_106553765.1\|1956545_1959449_-\|hypothetical-protein	gnl\|CDD\|271332	cd14962, NHL_like_6, Uncharacterized NHL-repeat domain in bacterial proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	0.000369
NZ_CP027804.1\|WP_106552345.1\|1952113_1953397_-\|hypothetical-protein	gnl\|CDD\|370749	pfam09913, DUF2142, Predicted membrane protein (DUF2142). This domain, found in various hypothetical prokaryotic proteins, has no known function.	0.00582615
NZ_CP027804.1\|WP_158704826.1\|1966615_1967680_-\|hypothetical-protein	gnl\|CDD\|214687	smart00482, POLAc, DNA polymerase A domain.	4.04632e-18
NZ_CP027804.1\|WP_106552340.1\|1940301_1943094_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	4.28342e-81
NZ_CP027804.1\|WP_106552343.1\|1946935_1949383_-\|FtsX-like-permease-family-protein	gnl\|CDD\|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	3.72575e-20
NZ_CP027804.1\|WP_011706367.1\|1955727_1956546_-\|hypothetical-protein	gnl\|CDD\|272930	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species. [Unknown function, General].	2.77078e-38
NZ_CP027804.1\|WP_106552344.1\|1949404_1950085_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	1.1e-86
NZ_CP027804.1\|WP_016351033.1\|1950282_1950750_+\|DUF4357-domain-containing-protein	gnl\|CDD\|379529	pfam14267, DUF4357, Domain of unknown function (DUF4357). This domain family is found in bacteria and archaea, and is approximately 60 amino acids in length. There are two completely conserved residues (G and W) that may be functionally important.	9.1827e-18
NZ_CP027804.1\|WP_158704827.1\|1967666_1968101_-\|hypothetical-protein	gnl\|CDD\|183873	PRK13159, PRK13159, cytochrome c-type biogenesis protein CcmE; Reviewed.	0.0046557
NZ_CP027804.1\|WP_011706364.1\|1960098_1960584_-\|hypothetical-protein	gnl\|CDD\|179964	PRK05208, PRK05208, hypothetical protein; Provisional.	7.57262e-25
NZ_CP027804.1\|WP_106553766.1\|1969797_1970304_-\|TM2-domain-containing-protein	gnl\|CDD\|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	1.61276e-10

>NZ_CP027804.1|WP_106552346.1|1953503_1954076_-|hypothetical-protein
MTIRPGLLALALLTGPLLTNIGQVEAYSYAAAGKEPLIDAREALLGAATDGKDASATLSEIAEELTYLEQHHKVELQAPLAAAIKTKDAAATAALLNRAYKAEIERRLEGASQNLGDYQTAKVLVVKSKRFLDLILPSLSEMDRKAAEQALAKVLDAIGNPGVFGVGAKPADAAAFAEAEKALMAVLAPL
>NZ_CP027804.1|WP_106552345.1|1952113_1953397_-|hypothetical-protein
MLALLQLAWLGWLLAFPVALDSDDALNFAHGVVRFSVLEFSPHFPGYPAFIWQARLINLVVAEPARAVQWASLLGSSLLAPLAASLAVRLWQRPSLLAPVWLLVLALPLTPTLALSGLSDGPALAAWLGALLTLQQRKIALAGLLLGLMLALRPSYFVLALLPLWLGLAQKGTRVRFVLPIALVGLACLLFVWQADGWAYFSEGRRFTDGHFTLWGNTAAAHGDRLLSWARTFNDQLTPLWPLLMGALLVLPLWQRSKDHNPAPPVLWTLYWLVLLLWTLFGQNPDNPRHLAPITLLGLVLLAGWLPRRGELPAMLGSLLLLLCTLTPPAAPAMTRAARLAEQACPALVTQWGVRLLRETTALPVTDGWYQGDARLALAQGACRLSRRPLGPEDLPAGGQRVWFAPRFHAEPGLWLGIQDHPRHQNW
>NZ_CP027804.1|WP_016351032.1|1950874_1952062_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MPHAPLSPRFLFILLGALAGLTPLAVDMYLPAIPAIARDLATSIDGAQLTISAFLGGFAIGQLFYGPLADSYGRKPVILAGLVMFAIASVGCAMADSLPELLAYRMLQAAGGAAGSVVVNALLRDLFEKEAFSRAMSFVILVMTLAPLVAPVVGGYISAHSDWRVIFWLLVGISLLICLMMQWKIQETLKPEHKQPLNLGQILKNYWGVLSHRGAMGYVLCGSLSSSGMFAFLSASPYVYIEYFKVPTEHYGWLFGLNILLMMVVTFVNSRLVKGVGAERMLQYGLLVLPCAGALLIYNAWSQTGGLWGIVIPVVLFVGHISLVGANAMTGLMGHFPQSAGTASALAGTLRFGIGAVVGILVNLNPPESPLPMAIAIAGCGFGSTLSYWLLTGKK
>NZ_CP027804.1|WP_016351033.1|1950282_1950750_+|DUF4357-domain-containing-protein
MLHKQVSFIIDSKGNKQAAVVPIEIYNELMTLQKALSDNKPGERELYHFNGKGAEAHGYPVGKRQNPGFMVLAGSTANGEDAASLREAVIELRQELLGKGILAPRSEGGFVFTADQLFNSPSLAASLVAGNNRSGLDAWQNSAGYTLKRSGFGKK
>NZ_CP027804.1|WP_106552344.1|1949404_1950085_-|ABC-transporter-ATP-binding-protein
MLTLHNLGKSFDNGSERLPLFHHLDLTLAAGEITLLLGQSGCGKSTLLNLIAGLIAPDEGEIWLRETRIDTLSPDQRARLRGRHFGIVYQDFNLLPTLTVAENLALPLAINALPPDEARIDQLLQRLDMSHKRHAWPEQLSGGQRQRVALARALIHQPQWLLADEPTGSLDEHNAEQVMALMMTAVRGTGAGLLLVSHNPAYGALADRVLRLEGGQLVELKGRRHD
>NZ_CP027804.1|WP_106552343.1|1946935_1949383_-|FtsX-like-permease-family-protein
MLPLPLKALLRLYRAHPWLLLMSLVGLTLGVSLVVAIELLNHSARTNFVAARSQLAGEANYRLAPDGGLDEQLYVTLVRSQPNLDAMPQLHGWLQDEQGRSFQLLGMDLFNPGPLRRLFGAAPDNKPTFSLTRADSVWLAAPEAKRLGWQTGQIRRFVLGGGEGAPRRPLTLTLAGTFEPGAVPMERLLVTDIGLAQPLLGKEGRLDRIVFKLSEDEANTLQRALQAALQSYAPHQPLWLEPISPALDASQLGDALALNLTALSLLAMAVGLFLVFNAQRFVQSVRRPQLAQLIILGMPPRRLLRWLTLEILILASIGTLLGLLLGSLLALALMGQLTQALADLYGPNPIDLLRLSPASLGKALVIGLLGTLAANLPGWWQLLRQSPLELREGNSRPPAHPWQRRGLAIAILLLCALCLWRPETGLGGALFVAGGWLLAMALALPDVLRAVLGRLRRRERGSLSARLGVAETLYHLDRTAIAVMALQLAIAAAIGIGVMVSSFRSSVEIWLGQRLAADLYVTAPKGVAGSKGTLSEQTLNTILAQPDVRAASRRSVHPARWQGQPIEWAQMDFIPELKAAYPLLAGRWPATPDEVLASEPLTVRLGVKVGQRLEVSGEQGPRTFTVTGVYQDYGSDKGQILHAFEGGKVQSLALFSQHVDRLADRLRAQFGERVNLLPAPAIHAAALRVFDQTFVVTELLKLLILGIAFVGIGSAFMVLGLARRGELQTLQSLGLSPRHCRRLLVWQGAGLGLLTALLALPVGYGLAWVLIEVVNPRAFGWRLAFEAAPLHAVTALLLAPVCGALASWYAARRVV
>NZ_CP027804.1|WP_106552342.1|1945874_1946939_-|carotenoid-1,2-hydratase
MKAIIWPLALICTLYGTGISANDLGAILGGGNDHFKKALPGQSIHLPADHGAHPDYRSEWWYLTGNLKDEQGRGYGMQWTLFRQGIEQEITSENPWLTPQLWLAQFAITDLSKGSHQQDERTSRQGPGLTGASGGQYWLKEWVLTSQGESLFPATLKVQSKAGDLDLKVSAAKPAVLQGKQGYSEKSPGNASFYYSYPRLTISGTLTLDGETRNVSGEGWFDHEWSSSVLAQWQSGWDWFSLQFEDGRELMLFRLRTKAGRSEPENRYGILIERDGSSRVLDPAQIRLTPGKTWRGPKGQAYPIEWQLAAGDMRLTIQARQPDQAMTGRFDYWEGAVSVSGDAKGVGYLEMTGY
>NZ_CP027804.1|WP_158704824.1|1944334_1945432_-|hypothetical-protein
MSATDIRREIDEYYIYLNFAHDLMGIKGKDNRVDYGLKIVSEFIKTATSRELRIQGKQIASQLKDAVKNHATLLPRRKPSRQIARDFKVLSEEIDVKRFGIPYGWLAERFESAGLKQPTDLPPHARIGIGVHAGFASVEEAFLLEDTYLLLAHAEAENERMKQSAKKLNEMQIRALSEDEYKNISAINGNVCTFSRLCVVSAAAFIESFVNSVGYAESVRRNDLDDNIKEELRGMKKNRYLSLDVKLEKYPRILRPDGRSPIVLSDIQQREEPFTSFILDTKALRDSSMHYAPNKVDIWRTPQEWLASANRATENAIQVAEKFWTACFPDRASPEYLDHLCHERFLMRAIDKVRYSDGNESANSG
>NZ_CP027804.1|WP_106552341.1|1943228_1943789_+|hypothetical-protein
MTPLNHYLPAYHFCEEHARDIAADPRTVIQAAANYRPEADPAFRHLIGLREVPMRLGHLLGHPQSASPPPFGLHRFVPLDSQDDNTLLYGLVGRFWRPDFGLVTMADSQAYLDFAAPGVAKLALGFSASRQPNGTTRLTTQTRVFCPDLACRLKFAPYWYLIRPVSGLIRRRILFAIKAESEGGLL
>NZ_CP027804.1|WP_106552340.1|1940301_1943094_+|FAD-binding-oxidoreductase
MLWNEFDATVLSRIPPERLVSDPDLRLAHGTDASFYRLVPERIVRLDSLDEVRFVLGVCRELGLPCTFRAAGTSLSGQALSDSVLITLTDSWRGHRILDEGARIALQPGVIGADANRYLAPLGRKIGPDPASINGCKLGGIAANNASGMCCGTAHNSYHTLHAMTLLLADGTVLDSGDPHSRAALANKRPELLTGLVALRAEVLANAELAAKIRHKYRLKNTTGYAINALLDHEDPIDILTHLMIGSEGTLGFIAEVVLDTVPEYPHKASALLVFRDAEQACLATSRLKAAPVAAVELMDGRSLRSVAGKPGLPDFIKALDLAACALLVEVHGESKEELVDRCEQVTAMAAEFAQVASVPFTGDSAGLWAIRKGLFPAVGAVRTTGTTVIIEDVAFPIERLAEGVAGLQALFDRFEYGEAIIFGHALEGNLHFVFTQGFDDPAQVARYGAFMDAVAELVAVRFGGSLKAEHGTGRNMAPYVELEWGPEGMALMRRIKALLDPDGLLNPGVIINDDPKAHLAHLKPMPASDAIVDPCIECGFCEAVCPSRTLSLSPRQRIVLYRELARRNRADEPSNQLSRLFDYQGIDTCAATGLCADRCPVGINTGALIKKLRTDKYQRFVPIARWSADHFAGVTRTARGALGLKRIAGKLLGDKALAGLVNGVRHLSGQRTPAWLPTLPGPSRYQWPQGEGSNDGSRERSVVYLPSCASRVFGQQEEAPSLPDVVLSLLNKAGCRVIVPQGIEGLCCGMPYDSKGMVEVATAKRTELAAALWQASEQGRWPVLLDTSPCVQRLLSGALGKGLRVFEPATFVLEHLLPHLELTPIDETVMLHITCSSRRMGLGDKMLALARACAREVIVPEHIQCCGFAGDKGLMTPELNAAALASLPAQVPRDCRQGFSNSRTCEMGLSQHAGIPYHSILYLVDQAAR
>NZ_CP027804.1|WP_011706367.1|1955727_1956546_-|hypothetical-protein
MFASFLITLREGLEAFLLVGICLSYLAKLGASRYNKFVYLGVGLGLLASLVVAFLFQVVVSQFESERYNHLLMAGILIFATLVLTYMAVWMQKQAKSQVGAMTARIDAAIDGGNLFGLVLLAFLAVMREGFETVLFFSALVYSGQGVDLHEGLMGALGGLLLSVVLVWGLLRSTRKVALAPFFRWTGLLIIIIAAGLLSSAVNMLQAAGLITFWTTPVFNISHILDDQGVFGTFLRALFGYNASPAGLQLLTWASYLVIFVTVWHRNYRPQR
>NZ_CP027804.1|WP_106553765.1|1956545_1959449_-|hypothetical-protein
MIAYDEGNAPRLVTANQSAGSVTLLERDSGKRLKEMQLGGDLRQLARADDGTLLVSDYRGDRLLLLDDDLDLDKAIPTGHRPYGVIFDSKRQWFWVTLFESARLQAYDTAGNLQLDVATAETPRGLALTDDDRLLLTHAMTGQLAIYDLAKLEKDAKSAVLPKPRLITLAETHSDTPSDSQGLPRLLDGITLSPDGSEAWLPHVLWSFDHPFQFQSTVFPAVSIIDLDEESERITERVDERKQLFLQINLPSVGNRSQIVSNPFAARFAADGKRVYLTLAGSEDLLVFDLSRSGKQNSNRHRRKKFQGGAKATQLLRHLPGQNPRDLFVDGDHILVHNVMGQDLTRLNTGGSGPFARVTVDVPHFAKLVETDPRPEALQRGERLFNLGNTAANSRFPMAGDNWMSCNSCHLDGFNFTNRYLMAAHRQQSGDNAINGHANLANMVAGDFIGEYLRMTQQTQGGMGHDTRDGAEPVDPAKPQSEVKAMMEELHAFVTADDNLPYLANWLRLDAPRTDPAKAPTTHPREWLNSASCQNCHQQAFQDWSESNHRLMGNSHPYYKVVQALARETEGEAFGQWCQGCHMPQQVMTGQLDLPKGSHMFEQGGASLIAAHQKGEPVVEEGTGCVLCHRITRLEDAGGNSAFTVNLKDRESYVFEDAAGGSLQHWLAERQINARPAMHKASYQKDFYRDAALCKSCHNEFAPGTGANIVNTWDEWENSSFAKANDPAKRRTCIDCHMSPEPGNGGAPVAGQSTENGTVKERLYRHNFTGAQHQLVGLRSATLEQESLALLRSSATLSARIEQGAASPQLVVRVANTGAGHALPTGVADFRELWLELTVTDANGKRVLASGQPVDGAVPDDARLFRKVFGDTEGKPVGLKFWRYAKLLEDTRIPADGWRDEAWPLPADAQGPFKADIKLNFRTYPKWVNDAVRAAEPSLPEPPIVLLNRLQLTLPPLPVTPATEPQS
>NZ_CP027804.1|WP_106552348.1|1959531_1959981_-|hypothetical-protein
MTSLSLSPRHCWQWLAYHHQAAEGSLYLMFFSGLLLWEPLTPLWSLARWNLFLHVALSLTLFPLLFGAFWLSHRSLLRKSRKPFLRTTGRIIEALLLICLASGLLLVLHGTPGDSMGNLASWAHWLSALALTPLVLRHAWRWTILKWRT
>NZ_CP027804.1|WP_011706364.1|1960098_1960584_-|hypothetical-protein
MRRFNFMLNGSRLMMFPFYVCILVCVALLMVKFAMLLYALCIDIVGIHYMDLITGVLTLVDFVLVAQMLILVSICGYVQFIQTQEQREALGNNWLSKINFASLKLIVINSLVTIAGIEVLKAFLDDGVGNEVEMKWSVIVFLAFSTAALIYAVTERLADHK
>NZ_CP027804.1|WP_158704825.1|1961063_1964864_+|hypothetical-protein
MSQRCSENWMLLKSILSGYENTRRFDFQSYEEHTRAQALSIFLVHAELATPKLDRETIEDILTGQKIWPNTGGDSIFAGGEITLSWLEDNGIISFYANWCSLHCWPVFDSEKIDPSMKQLTQAIEHINDIICGKNGYIRPHYAIAEEKLVKLLTPIFGNKPIIELLPALILEGGYFKLISGHNYVNSLVSTYLWFSLLQELEPKEAFERWMLCNRIYANWPCPVNFGHQQHSELTAFTNELISYICADKTLGVGMSVYWKQLINERDFIGVISPTRIHVNTTIDSLEDIKSTCESAPAEYMPTIHTLHNCYNVYEVDCVNDIRFMHELRHLKHYEFYRNPISFYKILLSDVIGRCIRIEGRVLESYHNEQLEKLIELSKLRPLLRYILFVILPMDDNSSYLLWLLSRSITCDIALFHLSEHSPTRHQHNREKTILLLDKAYQQVVCHEYLESIQGIADVGERLFQVVNFMGIRCYLDQDDFQSGFHYEFLMQFINCLNDNQIFILGQKFVTSANSPDNLSNNLHQRNHMYLIGFKLIERIESEGVDLLGELKRAMGETIINYYSSDLYDNLEGRQSNLEPTLFFASLPWYKIVSSSGANPIIALSINIDEWQKQLLYTNENSHKVASALRHYLLVLMCIGKHIGVEKDKNAISDLIEEISRRYGFNDRETAISLFDAAFYYNDFDLWLSFCSYCNNFTDSLYDKFIYRCGSKIPLDRVFVMLEQSTIVDRNTKLEDLIASRISPDDEYMGLSGIEQAFISACGVGYFELAAKLVTSAKDILSQEHIVNSQNHHWVKVRKAWLSYEYKQQLLELLQSNTLSPEKFVIEISKKNIPHELTDSTYQYINESNWKECDFFRQYISAAAYCDKEPEKCVRIMEHLCSETNHNDHAFMLFKGYIALHKKNGGQTDLQSALSKFLCSIKSVTPENMRNVWIASILDVYRQLNDSINIDKFWMKLSVNQQNRRDILHPYCRALISRGEPLRAQSIIDRYLAFNNQTLEGLGLNELIDELGRALKFEHPMTKLVNIVNEGSQRTSIQLAKHYHQIVSKDFPDYVEIVSPGKQPHEYLKDIIHEIASELLLRKGNLQQHKKSKSIERKESIRITKEDLINDWFTSLFDKRMAEARVGLRDQKRGGTSSSGNGPGEIDGYIIDSRNRRIAIFEAFRLFSVDTTVISEHLNKIAGYDNECLDAIFILAYCDVSDFSGLTRGYESFIATENYTGFTCVHGLENKLATLNSQDNLWFGMESRQRGDKRINIYHLLLDMKL
>NZ_CP027804.1|WP_106552349.1|1965077_1966619_-|hypothetical-protein
MMSKQKFDAVVFSEAFKATVQLYQGPFVVFPDQPGICHQLRSERLHLSLRSFARGRGERLNENRIKDVLDELDAFAFEDGLPVVAHYRVAPYLAGYIYNLGGGRFLQVTRGELEHIKTLPAGVYFTETSTMLAAPELAQQTDLKALLGWFNCTVDQKLLLLAWLTYTVATPKAAQLPYPILVVRAPAGSGKTFMCSKVIRQLVDPCRVASQTMPRAIKDVAISAQNSHALIYDNLRFIRHELSDGLCQVATGGSTVGRKLYTDGQEFSMDLRCALVLNGIHTFLTESDLVSRCVNINLAPIGSEQRLSEAELSAKFDEQLPSLIYTLHVLAAKVLAAKDSVEITFKSRMADFSVWVAGLETVLKLPQDQLQDAYRKNVEQAKVAGVVDDSLFVALCNFATRYPKTSSWHGTPHELLSALEAQTAVSLGSDMPKNAAAMSRRLPMLQDALASNGVYVYRGKASVRYYDVWFEPKANQSRGECDDVADPSVTPTQPSREDQSCEENDGVAESLLG
>NZ_CP027804.1|WP_158704826.1|1966615_1967680_-|hypothetical-protein
MTSSEEEFNLKFKEKLFENTILSRNITPAIIPRYSPSGEPQIPSISSKTPFIYATINYHCHQKGVEIRPDIHPSLISNAQGGLAELDALERIMEFHSMTKNSTSLKHVSKAFAASTGRSVIYGPSLTSLKKKFWPFILDPDPRFRYVLVDYSQQEPCIAAWFANDRELLAAYHQGDLYLHIGRHPWLTGLDRDTLKKLILPYSYGQQAAAYAKLHGIPLETAQHYWQALREVFNRVDAALNSRSQVAFRDGFVRCLDWGAHVTPLSNPRAVRNWPVQAAGADIMRRSVIGLAEAGIDLRLTVHDSFLIRVPIAEQEQQVAKAITVLKQASASVLGGFELNVQVDGVFDGQAGVK
>NZ_CP027804.1|WP_158704827.1|1967666_1968101_-|hypothetical-protein
MVKLYAFIPFRSEIGAVGMMQVNLQSKDSYSTTKRQILEAATSTYSVTRLADSYAFSKSEDNLGIAPIADREYNSILELVFSESIIASREHPIFRKLATPVLPNNDENEENEDKSNKGSNTVSLPPASDVLSIDIDLEHINDLL
>NZ_CP027804.1|WP_158704828.1|1969072_1969810_-|hypothetical-protein
MGMVRVKRLVLAASVSLLMAPAAQAGLLSKWDELTVKGGELESCPGVTLEQQADSFFKDPEWTAGKATDGRKLVNVSGTFTYMERPVRGMLQMWVQGEEFSVEALEVNGQPQPDVMIDALLDKMCEAAKEEAAPQTALRGKQPLPFIGKRSFNFAGGSGTERYITIKQSGQTVIESCGASLIDDNGNFQEPSCSVDWKGPFATPLKTSSAMYRVEKDRIYQIEPDGSPARDCMASREDCSVSLYE
>NZ_CP027804.1|WP_106553766.1|1969797_1970304_-|TM2-domain-containing-protein
MLEASWKYGINPFGLRVTVHFTSPEEGIVELSLTGSFVDAIDTWGTAKKKAKAIAEVLPLPIDAAAWPIREQASVPASTQPAPAGGTVHHRGKRKVLMALLVFFGGGIGLHKFYAGNWGWGLIYLAACTTGIPVLLSLVEFIKVLCLSQEEFDKRYNYQAVRAFQWVW

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Crispr_ID: NZ_CP027804_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_7

3830350-3830454

Orphan

Consensus_repeat	Method
CCATGCCGTTGCCTACCACCAGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_7

>merge|NZ_CP027804|7|3830350-3830454|CRISPRCasFinder
CCATGCCGTTGCCTACCACCAGCAACCGCTGTTTCTCCATCCTCTCGGACGACTCGACGCAGTGATGGTCCATCTCATCATCCATGCCGTTGCCCACCACCAGCA

>NZ_CP027804|7|7|3830350-3830454|CRISPRCasFinder
CCATGCCGTTGCCTACCACCAGCA	ACCGCTGTTTCTCCATCCTCTCGGACGACTCGACGCAGTGATGGTCCATCTCATCAT
CCATGCCGTTGCCCACCACCAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_106553252.1\|3834903_3835662_-\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|381169
NZ_CP027804.1\|WP_106553250.1\|3832383_3833883_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|372585
NZ_CP027804.1\|WP_106553242.1\|3820680_3821757_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|366359
NZ_CP027804.1\|WP_106553251.1\|3834179_3834764_-\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP027804.1\|WP_106553241.1\|3820197_3820662_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181843
NZ_CP027804.1\|WP_106553244.1\|3824489_3825215_+\|carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|239398
NZ_CP027804.1\|WP_106553254.1\|3838624_3839131_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349971
NZ_CP027804.1\|WP_106553248.1\|3830498_3831320_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP027804.1\|WP_106553255.1\|3839138_3839237_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349971
NZ_CP027804.1\|WP_106553256.1\|3839226_3839343_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349971
NZ_CP027804.1\|WP_106553246.1\|3827429_3827891_-\|nitrite-reductase-small-subunit-NirD	unknown	unknown	gnl\|CDD\|379380
NZ_CP027804.1\|WP_043161981.1\|3826192_3827284_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182165
NZ_CP027804.1\|WP_011707167.1\|3822064_3822820_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|366523
NZ_CP027804.1\|WP_106553245.1\|3825290_3826199_-\|pseudouridine-5'-phosphate-glycosidase	unknown	unknown	gnl\|CDD\|377251
NZ_CP027804.1\|WP_106553253.1\|3835658_3838322_-\|nitrate-reductase	unknown	unknown	gnl\|CDD\|239155
NZ_CP027804.1\|WP_106553257.1\|3839490_3840231_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106553249.1\|3831424_3832369_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP027804.1\|WP_106553243.1\|3823062_3824040_-\|cytochrome-c-peroxidase	unknown	unknown	gnl\|CDD\|224771
NZ_CP027804.1\|WP_029299224.1\|3821804_3822020_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106553240.1\|3819307_3820021_-\|beta-ketoacyl-synthase-chain-length-factor	unknown	unknown	gnl\|CDD\|379349

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_106553252.1\|3834903_3835662_-\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|381169	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT). SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.	1.28466e-102
NZ_CP027804.1\|WP_106553242.1\|3820680_3821757_+\|SAM-dependent-methyltransferase	gnl\|CDD\|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	2.87837e-08
NZ_CP027804.1\|WP_106553251.1\|3834179_3834764_-\|ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	8.81459e-15
NZ_CP027804.1\|WP_106553241.1\|3820197_3820662_+\|hypothetical-protein	gnl\|CDD\|181843	PRK09423, gldA, glycerol dehydrogenase; Provisional.	0.0023085
NZ_CP027804.1\|WP_106553244.1\|3824489_3825215_+\|carbonic-anhydrase-family-protein	gnl\|CDD\|239398	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidines. This sub-family includes bacterial carbonic anhydrase alpha, as well as plant enzymes such as tobacco nectarin III and yam dioscorin and, carbonic anhydrases from molluscs, such as nacrein, which are part of the organic matrix layer in shells. Other members of this family may be involved in maintaining pH balance, in facilitating transport of carbon dioxide or carbonic acid, or in sensing carbon dioxide levels in the environment. Dioscorin is the major storage protein of yam tubers and may play a role as an antioxidant. Tobacco Nectarin may play a role in the maintenace of pH and oxidative balance in nectar. Mollusc nacrein may participate in calcium carbonate crystal formation of the nacreous layer. This subfamily also includes three alpha carbonic anhydrases from Chlamydomonas reinhardtii (CAH 1-3). CAHs1-2 are localized in the periplasmic space. CAH1 faciliates the movement of carbon dioxide across the plasma membrane when the medium is alkaline. CAH3 is localized to the thylakoid lumen and provides CO2 to Rubisco.	2.55109e-103
NZ_CP027804.1\|WP_106553254.1\|3838624_3839131_+\|RNA-methyltransferase	gnl\|CDD\|349971	cd18098, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.38233e-56
NZ_CP027804.1\|WP_106553248.1\|3830498_3831320_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	6.57738e-120
NZ_CP027804.1\|WP_106553245.1\|3825290_3826199_-\|pseudouridine-5'-phosphate-glycosidase	gnl\|CDD\|377251	pfam04227, Indigoidine_A, Indigoidine synthase A like protein. Indigoidine is a blue pigment synthesized by Erwinia chrysanthemi implicated in pathogenicity and protection from oxidative stress. IdgA is involved in indigoidine biosynthesis, but its specific function is unknown. The recommended name for this protein is now pseudouridine-5'-phosphate glycosidase.	0
NZ_CP027804.1\|WP_106553255.1\|3839138_3839237_+\|RNA-methyltransferase	gnl\|CDD\|349971	cd18098, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	0.000327874
NZ_CP027804.1\|WP_106553246.1\|3827429_3827891_-\|nitrite-reductase-small-subunit-NirD	gnl\|CDD\|379380	pfam13806, Rieske_2, Rieske-like [2Fe-2S] domain.	2.72736e-41
NZ_CP027804.1\|WP_043161981.1\|3826192_3827284_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|182165	PRK09954, PRK09954, sugar kinase.	1.05514e-97
NZ_CP027804.1\|WP_011707167.1\|3822064_3822820_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|366523	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease.	1.43464e-58
NZ_CP027804.1\|WP_106553249.1\|3831424_3832369_-\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.28178e-49
NZ_CP027804.1\|WP_106553253.1\|3835658_3838322_-\|nitrate-reductase	gnl\|CDD\|239155	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. Members of the MopB_Nitrate-R-NapA CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP027804.1\|WP_106553250.1\|3832383_3833883_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|372585	pfam13379, NMT1_2, NMT1-like family. This family is closely related to the pfam09084 family.	2.03066e-108
NZ_CP027804.1\|WP_106553243.1\|3823062_3824040_-\|cytochrome-c-peroxidase	gnl\|CDD\|224771	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism].	1.97801e-118
NZ_CP027804.1\|WP_106553256.1\|3839226_3839343_+\|RNA-methyltransferase	gnl\|CDD\|349971	cd18098, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	0.000208924
NZ_CP027804.1\|WP_106553240.1\|3819307_3820021_-\|beta-ketoacyl-synthase-chain-length-factor	gnl\|CDD\|379349	pfam13723, Ketoacyl-synt_2, Beta-ketoacyl synthase, N-terminal domain.	7.22178e-85

>NZ_CP027804.1|WP_106553246.1|3827429_3827891_-|nitrite-reductase-small-subunit-NirD
MNGVSGLHTSHRHQGEGMNGSCELGSSHKEQEVEMNRLKDDMLPSEHGEWLRACELAALPEQAGRSAWLGGRALALFRLGERVYALDAVDPLTGVAVLGRGLVGDCDGEPVVASPLYKQRYALADGRCLDDPALRVACWPVMHSAGEVWVLLG
>NZ_CP027804.1|WP_043161981.1|3826192_3827284_-|winged-helix-turn-helix-transcriptional-regulator
MTEREQEILALLRQDPMIAQQELADRLGISRSALASHISSLMRQGYVQGRGYVLREGPYAVVIGGANMDICGCSHDNLRIGDSNPGKVRTSAGGVGRNIAENLARLGTDTRLLSAVGNDQYGHHLLDVTQRAGVDVRQVLMLDGQATSCYLSLHDGSGEMSCAVNDMAIIDQLTPARLTPLSGFLGAARLWVLDTNLATHTLDWLFERQGEHIIFVDTVSVAKVEKIRPWLHRIHTLKPNRSEAEQLCGFTIAGPDTWPMAAAWFHRAGVQRLFLSLGDQGIFYSDGECQGHLPVLGSPVVNVTGGGDAFMAGLAHAWLQEQGIMETTRFALGCAALTVNCSDTVFSGLSKAAVERMLEEYPC
>NZ_CP027804.1|WP_106553245.1|3825290_3826199_-|pseudouridine-5'-phosphate-glycosidase
MLNAYLDIQPVVAEALAAGKPVVALESTIISHGMPYPQNVETARQVEQVVRDNGAVPATIAIIDGRLKVGLDEGALEALGRAGHAATKCSRRDIPFVLANKGLGATTVASTMIIAAMAGIRVFATGGIGGVHRGAQETFDISADLQEFAQTPVAVVCAGAKSILDIGLTLEYLETQGVPVIGYQTEELPAFYTRESGFKVDYRLESPAAIAEALRLKWELGLAGGAVVANPIPTEFAMPKADIDAAIKQALEEADEQGVKGKESTPFLLARVCELTGGNSLAANIQLVLNNAALGARIAASL
>NZ_CP027804.1|WP_106553244.1|3824489_3825215_+|carbonic-anhydrase-family-protein
MRKSLLAAALLLCPAAFAATPHWEYSGEAGPAQWARLTPEFGQCAGSNQSPVNLDGLVEAELAPLQFHYLAGGRSVTNNGHTVQVDYAPGSSLELDGMRFELKQFHFHAPSENLIKGHSYPLEGHLVHANAKGELAVVAVMFEPGQANAALSQAWQVLPAKAGESHAFKEPVSAEQLLPAKRDYYRFSGSLTTPPCSEGVRWLVMKQPVQVSQAQIDAFKAVMHHPNNRPVQPLHGRLVLQ
>NZ_CP027804.1|WP_106553243.1|3823062_3824040_-|cytochrome-c-peroxidase
MNKYCLLLALGLPGMGWANEPIQPVEAAKVSAPEKVELGKMLFFEPRLSKSNAISCNSCHNLATGGVDNQVSSLGHKWKEGPINSPTVLNSSLNFVQFWDGRAKDLQAQAAGPIENPLEMAFTHKLAVETLHTLPEYRTRFSAVYGKADFGIDEVTDAIAAFEETLVTPNAPFDRWLKGDAKALTAQQLKGYQLFKEKGCTACHNGVAIGGNSYQKMGLVKPFKTDNPAQGRGGVTGEKQFIGWFKVPTLRNIELTYPYFHDGSVWDLKEAVQIMADIQLGQTLSEQEADDMTAYLKSLTGEQPQIVLPILPPSQPDTPRPQVKS
>NZ_CP027804.1|WP_011707167.1|3822064_3822820_-|DNA/RNA-non-specific-endonuclease
MNNINKLVLAIGFTLTTFPSLAAGFQCKDHVKLGVPSQSSQLLCRDGYAAGYNYDTKVSDWVSYRMTAASAQGQVPRKDAFAEDKEVPVQFRATLADYKGSGYDRGHQAPAADMRSTATTMKQSFLLTNMTPQLPALNQGAWRILEEKTRQWAIAYQDVYVITGPIFTNSDASIGNGVTVPHAYYRVVMDVANKEAIAFILPQQNVSASKLADYIVTVDAVEEQTGLDFFAELPDEQEEAMESQLMAMWGN
>NZ_CP027804.1|WP_029299224.1|3821804_3822020_+|hypothetical-protein
MRHDCMTLMALGLTLGSLLGGCADIKEAGRTVGHTTRNVTREIGHTTRDVTREIGHGTRDTVKKVGDELSK
>NZ_CP027804.1|WP_106553242.1|3820680_3821757_+|SAM-dependent-methyltransferase
MNHYQADPYNALEAISEAQKIAFGPMLFQASWCLRETGVLAYLETRGSQGAALADIAQACQLSEYGAGVLLDMGLGGGLCYLSEEHYVLGRVGKYLLHDAMSRVNLDFTQHVCYQPLAHLLDAIRDGTPAGLQEFGPWQTLYPHLSELPEPARRSWFAFDHFYSDWAFQQAQDKVFGYEPRHLYDLGGNTGKWAIACARRDPALHVTILDLPEQLALARCNIEEAGLAARVHGHPVDLLQAGPLPGEADIWWMSQFLDCFSHAQIVAILNRVRLAMKPDARVCILELFWDRQSFEAASFSLNATSLYFTCLANGNSRFYHSKQLYQCLREAHFHVEAEHEIPGPGHTLLVARPLHTRP
>NZ_CP027804.1|WP_106553241.1|3820197_3820662_+|hypothetical-protein
MKINYLCCLIATPKLMNILPKENIMKLINKISVLLACALLAACSTSQPIRNMAANPVPFNLTEEQVANAIITAGISKSWVMRQEQPGLIRGQVNVRQHQAVINIPYSARDYSINYVSSVNLDDKGKGSIHRSYNRWVLGLNQAIQAELARTQSR
>NZ_CP027804.1|WP_106553240.1|3819307_3820021_-|beta-ketoacyl-synthase-chain-length-factor
MLSFSLLDSQALSPGLADEAAWQAWAQQGRWPVDPPFPATPLLPMMMARRLSQGARLAVQVGLSLLARHQIDSAVFVSRHGELARSMTLLQALADGQALSPTDFSMSVHNTAAGLCSIQGKAAIPMTSLAAGENSLMAGLTEAVCALQAGARRVLLVAFEGPVPEFHRPWLAEEAPPHALGLVLTAGEEWHCAGAHRTVESVARPLPQSLACWRALLRGEPTLLLADDRQEWRWQRC
>NZ_CP027804.1|WP_106553248.1|3830498_3831320_-|ABC-transporter-ATP-binding-protein
MKSYLQLSDVGISFETEQGRFEALSRVNLRIERGEFVSLIGHSGCGKSTVLNLVAGLLEPTTGGIILDGREVAGPGPERAMVFQNHALLPWLSVRQNVALAVGQVEPNRRAVAERVDYYLSLVQMEHASQKMPHELSGGMKQRVGIARALSLSPKVLLMDEPFGALDALTRAHLQDALMAIQAELGNTVIMITHDVDEAVLLSDRIVMMTNGPAATVGEILTVDLPRPRNRVALADDGHYHKLRQQVLRFLYEKQRKVTPLKVAEPVRSQRRA
>NZ_CP027804.1|WP_106553249.1|3831424_3832369_-|ABC-transporter-permease
MKRHQWKIMDWKNLVQPLLGVLLFLGLWQWGASQVQTSLGTLPGPLATASQLWSLGLDHLAEREKASAFLERQRVRNAERLAADPAAEVKLRPYTGRPTFFDQIGTSLLTVLCGFGLATLIAIPCGVLLGMNQGLYRAANPVIQLLKPVSPLAWLPLITLVVSALYASPTPWLAKSFLTSALTVTLCSLWPTLINTAVGVAGLDRDLHNVSRVLRLSFVTHVRRIVLPGALPMIFTGLRLSLGVAWMVLIAAEMLAQNPGLGKFVWDEFQSGGSASLARIMVAVITIGLIGCALDRGMLALQQWLSWDKRQVLR
>NZ_CP027804.1|WP_106553250.1|3832383_3833883_-|ABC-transporter-substrate-binding-protein
MVRPQGFTGNRAKKPHRSRIGGAFFWSSSCNEAGGRQPGTGTERGNCMNRRQGCAGMLLAVLSLPALAAVGAPEQEEIKLGFIKLTDMAPLAVAYERGYFEDEGLYVTLEAQANWKVLLDRVIDGELDGAQMLAGQPLAAHIGIGTQAELVTAFAMDLNGNAITVAKPVWAAMAAQLPKPVAGKVPAPVSAAALKPVVEQYRQAGKPFNMGMVFPVSPHNYELRYWLAAGGLNPGFYAPKLGDNSGQRQADVLLSVTPPPQMPATLEAGTIAGYSVGEPWNQQALAKGIGVPVITDQEIWRNNPEKVFGVTRQWAERHPNAHVRLVKALLRAAWWLDAEQNGNRREAARLLAKPEYVGADEAVIASSMTGTFEYGKGDKRQLPDFNVFFRHHATYPYYSDAIWYLTQMRRWGQIPEAKPDAWFEQVAKAVYQPEVYRQAAEALIAEGKLKAQDFPDFASEQGYRGPQDGFIDGFIYDGRHPNAYLQQFAIGLKGDERVQ
>NZ_CP027804.1|WP_106553251.1|3834179_3834764_-|ANTAR-domain-containing-protein
MTILTSGGPAGPVSRLLIHADEPGQANRLALLVSQYGHQPRILDTRQLLSPDGQGDALLVSSRRFDAETRLGLSLWPDMPRLLFCERLGGEAQQALLQQGVLLVPHPCGEKEPVEQWLRLARSQLAMVQALAQTESELRRQLVERRLIEQAKGRLMRHQGLDEEQAYRLMRSTAMSRHLSLGELARQLLLALPA
>NZ_CP027804.1|WP_106553252.1|3834903_3835662_-|uroporphyrinogen-III-C-methyltransferase
MSQISLVGAGPGPLELLTLRALQRIEAAEVVVYDRLVGEAILARIPQGAARFDVGKRCGEPSPSQAQINALLLALARTGKRVVRLKGGDPLVFGRGGEEALHLARHGIAAELVPGITAALGCAASSLIPLTHRGLARSLTLVTGHLMDEGDYQGWQGLTRAGHTLVFYMGLERAAEIRQGLLAAGASPDLPVALVVAGCSARQQVHENTLDGLAQAAGALLGQSPVLMIMGEVVRLRAELQGLLGLALDRVA
>NZ_CP027804.1|WP_106553253.1|3835658_3838322_-|nitrate-reductase
MNTTCAYCGVGCGIRLSREGDDWQLQGDEQHPANAGALCVKGASLLESLDFPDRLLYPRWLGQRIGWEQALDTLAERFAAILAESGPQAIGIYLSGQLTTEDYYVANKLMKGYLGSANVDTNSRLCMSSAVAAHQRAFGEDLVPACYEDLELADLVVITGANTAWTHPVLFRRLQQARARRPELRLVVLDPRRTMTAEQGDLHLALRPGSDVALWNGLCRYLLDHDGWDKDYVARHVSDFEALAAALDDPAWQLEAVAQRCDLAPGDLLGFYRLFARTPKTVSLFCQGINQSNQGVDKANAIINAHLLCGRIGKPGAAPFSMTGQPNAMGGREVGGLATQLAAHMGFGEAERDRVQRFWQSPTMVSGPGHKAVELFEAVHRGEIRALWVLGTNPAVSLPDGNRVREALARCELLVVSEVTANTDTARLAHLLLPAAAWGEKSGTVTNSERTISRQRAFLPLPGEAKPDWWALTELARRLGFGEGFAYEHEHDIFCEHAALSGFENEGQRQFDISGLARLSRAEFEALAPLSWPVNARWPQGRARLFEDGRFATPDGRARLLPLAQLFPPEPVAAPEAVQPPAGLSLQLNTGRLRDQWHTMTRTGHVPRLQEAEPWPRVRLGAASLLALGLKEGDLVRLHNELGEARLLVGLDEGLREGEAFLPMHWTDSQCSQGAVNRLIAAVVDPLSGQPMFKQGRVRAEPQPTRWQGLWLGRRDWDEPLDWWARRPLQEGNCTLLASWSETPEALWQRLATQGRWLRLPLASGWLAVALAGDRIDGLLLVGERRPDIKVELLASLLGTPLQAGALSQTLNAALLGESRLICSCLRVSEQRIVDAIVRQGVSELVGLQALLGCGSNCGTCLPEIDKLLIKHVFIASTQELNTRSVR
>NZ_CP027804.1|WP_106553254.1|3838624_3839131_+|RNA-methyltransferase
MRESDHEYLPPQGDESAPHGDTGYCCIGLVNPKSPENVGAVMRAAGCYGADEVYYTGNRFELARRFATDTKQMVDKIPLLGVDDLMEMVPAGCTPVLVDLIEGATSLPDYVHPERAFYIFGPEDGTLDPARFKAVQEVIYVPTQGCMNLAASVNVILYDRLAKQLRAK
>NZ_CP027804.1|WP_106553255.1|3839138_3839237_+|RNA-methyltransferase
MLYVATAKGCMNLAASVNVILYDRLAKQLRAK
>NZ_CP027804.1|WP_106553256.1|3839226_3839343_+|RNA-methyltransferase
MPSKQQVFYVTTPKGCMNLAASVNVILYDRLAKRLRAK
>NZ_CP027804.1|WP_106553257.1|3839490_3840231_-|hypothetical-protein
MIRLLLSLTLLICWPGRADPLYVYCDDWPGFCQPDGRGVYLDIVRAIYQPNGYQVMPRIVPYKRALAVIAQKGGDMAMGVYRDEVSGVLQPRHPASADDLTVLMLKKWRPQWQGEHSLSGQGVVWLRGWAFDKYIPVSMRWHEIDSHDMALQLLAKERYRYYLTAGVLYSADSIPANMQRIFLRWVPTYPIFADTEKGRSLQQLWDQGMVNLVRHGALAEIYRRYQLYDYYRDFIKQQEQRLAPGN

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Crispr_ID: NZ_CP027804_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_8

4105850-4105982

Orphan

Consensus_repeat	Method
CTGGTGTGGCTGAAGGATTTGATGAAGGAGCTGGTGAATCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_8

>merge|NZ_CP027804|8|4105850-4105982|CRISPRCasFinder
CTGGTGTGGCTGAAGGATTTGATGAAGGAGCTGGTGAATCCTGAATAACGGCTGCGTCTGGCATACCAAAGCAGCATGCGCAGCAACCGGCCCTGGTATGGCTGAAGGATTTGATGAAGGAGCTGGTGAATCC

>NZ_CP027804|8|8|4105850-4105982|CRISPRCasFinder
CTGGTGTGGCTGAAGGATTTGATGAAGGAGCTGGTGAATCC	TGAATAACGGCTGCGTCTGGCATACCAAAGCAGCATGCGCAGCAACCGGCC
CTGGTATGGCTGAAGGATTTGATGAAGGAGCTGGTGAATCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_106553360.1\|4094357_4094717_+\|DUF4810-domain-containing-protein	unknown	unknown	gnl\|CDD\|226710
NZ_CP027804.1\|WP_106553375.1\|4117158_4118805_-\|DUF3763-domain-containing-protein	unknown	unknown	gnl\|CDD\|184118
NZ_CP027804.1\|WP_106553374.1\|4115651_4117106_-\|ATPase-RavA-stimulator-ViaA	unknown	unknown	gnl\|CDD\|236815
NZ_CP027804.1\|WP_106553359.1\|4093674_4094346_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224379
NZ_CP027804.1\|WP_106553370.1\|4108121_4109060_+\|bifunctional-helix-turn-helix-transcriptional-regulator/GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP027804.1\|WP_106553362.1\|4096902_4098195_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP027804.1\|WP_106553368.1\|4106124_4106691_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP027804.1\|WP_085946238.1\|4110707_4112297_-\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP027804.1\|WP_106553369.1\|4106795_4107917_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
NZ_CP027804.1\|WP_106553365.1\|4101861_4103565_-\|amidase	unknown	unknown	gnl\|CDD\|180626
NZ_CP027804.1\|WP_158704882.1\|4101001_4101634_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106553364.1\|4099610_4100996_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379050
NZ_CP027804.1\|WP_106553363.1\|4098359_4099124_-\|CphA-family-subclass-B2-metallo-beta-lactamase	unknown	unknown	gnl\|CDD\|293845
NZ_CP027804.1\|WP_106553373.1\|4110199_4110538_-\|steroid-delta-isomerase	unknown	unknown	gnl\|CDD\|226913
NZ_CP027804.1\|WP_043127922.1\|4114637_4115642_+\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP027804.1\|WP_106553361.1\|4095577_4096828_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP027804.1\|WP_106553366.1\|4103691_4104789_-\|agmatine-deiminase	unknown	unknown	gnl\|CDD\|184135
NZ_CP027804.1\|WP_106553371.1\|4109117_4109576_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP027804.1\|WP_106553372.1\|4109638_4110133_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP027804.1\|WP_042065524.1\|4094713_4095364_+\|DUF799-domain-containing-protein	unknown	unknown	gnl\|CDD\|368539

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_106553360.1\|4094357_4094717_+\|DUF4810-domain-containing-protein	gnl\|CDD\|226710	COG4259, COG4259, Uncharacterized protein conserved in bacteria [Function unknown].	4.94288e-42
NZ_CP027804.1\|WP_106553375.1\|4117158_4118805_-\|DUF3763-domain-containing-protein	gnl\|CDD\|184118	PRK13531, PRK13531, regulatory ATPase RavA; Provisional.	0
NZ_CP027804.1\|WP_106553374.1\|4115651_4117106_-\|ATPase-RavA-stimulator-ViaA	gnl\|CDD\|236815	PRK10997, yieM, ATPase RavA stimulator ViaA.	0
NZ_CP027804.1\|WP_106553359.1\|4093674_4094346_+\|hypothetical-protein	gnl\|CDD\|224379	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane].	1.70239e-83
NZ_CP027804.1\|WP_106553370.1\|4108121_4109060_+\|bifunctional-helix-turn-helix-transcriptional-regulator/GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.09528e-15
NZ_CP027804.1\|WP_106553362.1\|4096902_4098195_-\|hypothetical-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.53991e-09
NZ_CP027804.1\|WP_106553368.1\|4106124_4106691_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.48141e-09
NZ_CP027804.1\|WP_085946238.1\|4110707_4112297_-\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP027804.1\|WP_106553369.1\|4106795_4107917_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	3.16978e-173
NZ_CP027804.1\|WP_106553365.1\|4101861_4103565_-\|amidase	gnl\|CDD\|180626	PRK06565, PRK06565, amidase; Validated.	0
NZ_CP027804.1\|WP_106553364.1\|4099610_4100996_+\|ATP-binding-protein	gnl\|CDD\|379050	pfam13175, AAA_15, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	4.76522e-11
NZ_CP027804.1\|WP_106553363.1\|4098359_4099124_-\|CphA-family-subclass-B2-metallo-beta-lactamase	gnl\|CDD\|293845	cd16287, CphS_ImiS-like_MBL-B2, metallo-beta-lactamases, subclass B2; MBL-fold metallo-hydrolase domain. Includes Aeromonas hydrophyla CphA, Aeromonas veronii ImiS, and Serratia fonticola Sfh-I. MBLs (class B of the Ambler beta-lactamase classification) are a diverse group of metallo-enzymes that are capable of catalyzing the hydrolysis of a wide range of beta-lactam antibiotics. MBLs have been divided into three subclasses B1, B2 and B3, based on sequence/structural relationships and substrates, with the B1 and B2 MBLs being most closely related to each other. B2 MBLs have a narrow substrate profile relative to subclass B1 MBLs that includes carbapenems, and they are active with one zinc ion bound in the Asp-Cys-His site, binding of a second zinc ion in the modified 3H site (Asn-His-His) inhibits catalysis.	2.00783e-159
NZ_CP027804.1\|WP_106553373.1\|4110199_4110538_-\|steroid-delta-isomerase	gnl\|CDD\|226913	COG4538, COG4538, Uncharacterized conserved protein [Function unknown].	4.78911e-19
NZ_CP027804.1\|WP_043127922.1\|4114637_4115642_+\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	8.55956e-51
NZ_CP027804.1\|WP_106553361.1\|4095577_4096828_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.15938e-152
NZ_CP027804.1\|WP_106553366.1\|4103691_4104789_-\|agmatine-deiminase	gnl\|CDD\|184135	PRK13551, PRK13551, agmatine deiminase; Provisional.	0
NZ_CP027804.1\|WP_106553371.1\|4109117_4109576_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.59685e-27
NZ_CP027804.1\|WP_106553372.1\|4109638_4110133_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.60154e-17
NZ_CP027804.1\|WP_042065524.1\|4094713_4095364_+\|DUF799-domain-containing-protein	gnl\|CDD\|368539	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.	2.33067e-120

>NZ_CP027804.1|WP_106553366.1|4103691_4104789_-|agmatine-deiminase
MSIKTMNTTPAADGFTMPAEWAHQQAVWMIWPFRPDNWREAGRFAQATFAKVADAIGQATPVFMGVPARFMAQARAIMPAHVTLVEMNSDDCWARDSGPTIVTNAAGECRGVDWGFNAWGGHKGGLYYPWDQDEQVAAQMLAQHGMARYDAPLILEGGSIHVDGEGTCLTTAECLLNENRNPHLSKEQIEAHLRDYLGVTSFIWLDEGVYMDETDGHIDNMCCFVRPGEVALHWTDDQNDPQYARSVAALKVLEAAVDAKGRKLKVWKLPQPGPLYCTQEESAGVESGTGVSREAEGRLAGSYVNFLITNDRIVYPLLDVATDGEAQRILEEIFPEHKVVGVPAREILLGGGNIHCITQQIPSGQ
>NZ_CP027804.1|WP_106553365.1|4101861_4103565_-|amidase
MIEVTEVSIAELRGALESGRTTAVELVKAYLARIEAYNGPETQTRLNALVVPNPDALKEAEASDARRARGETLGPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTVERLRAAGAICLGKTNMPPMANGGMQRGVYGRAESPYNADYLTAPFASGSSNGAGTATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYARTMADLLEVLDVVVADDSDPRGDLWRLQPWVKIPKASEVRPASYLDLAAKPDALKGKRLGVPRMFINKDELAGTSENPGIGGPTGQRIHTRPTVIALWEDARKALEAAGAEVIEVDFPLVSNCEGDRPGAPTVFNRGIVSPEFLNDELWELSGWAFDDFLRANGDPKLNKLADVDGPKIFPHDPGTLPNREGDLAAGMDEYVNMAKRGLKRFDEIASVPDGLRGLEKTRKLDLEDWMDGLKLDAVLFPTVADVAPADADVNPASADIAWSNGIWVANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFAGRAYDDNNLLRFASAFESTGSKRQVPPRTPPLV
>NZ_CP027804.1|WP_158704882.1|4101001_4101634_+|hypothetical-protein
MIETIRKVINPNVKVRHQDKQVVFIEASDDARLKKIIFNLTNFHTIGGGELINAIIVSSDHASELLKQFSHFINPDCADITRKCDYIIFHANENKLNVILCELKSSTMGTAGRCPAQFEFSRKFASYIIEIAKTHGLLHLENFTPDEMTTTFYKVAFLPGPAIAQSPVGADNIVKKTMKKADDGIISIPLAVTSEGSCCIPWRHFIEALV
>NZ_CP027804.1|WP_106553364.1|4099610_4100996_+|ATP-binding-protein
MIKRLIIKNLGPIKEADILFGNLTIICGKNSVGKTYLSYTHYLLTSVFIDSFRSSIKYPELEAWIKNNYTDDFSKFTFTLNVSEIKINTNKIINDLKSTQTAVFLANSLELNSTHLPEIDVEIDNDFLDRVSKSQGGISAIISDTNVSIEKLADENLFRIDITRDESAPSTSNKKTIDDISNVLSYFICKRLLSHSQFAITSERTGISLFYNDLDSSLRKSIIDFGYKNKDQSEPKSTYIKPIEDNIATIRSLSNGRGFFRISNGNKKNLDTIRIMRDLIGGKYKSEEKIIKFIPENRDNVVVSLKSSSGAAKSMLLLDHFVTKLQTMNGLLIIDEPEMNLHLDNQKKMAHLLAALSNNGVRVVVTTHSDHFVREINNLVMLSSTKIDRKSKSELLKKANIKDVSILRPESVSTVVIESGPGKTKAMRISELGIDLTLFNDEIIKSIDIANEISMAIYEGS
>NZ_CP027804.1|WP_106553363.1|4098359_4099124_-|CphA-family-subclass-B2-metallo-beta-lactamase
MMKGWIKCGLAGAVVLMASFWGGSVRAAGMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVSSKPVLEVINTNYHTDRAGGNAYWKSIGAKVVATRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVHEGDFTLQEGKLRAFYVGPAHTPDGIFVYFPDQQVLYGNCILKEKLGNLSFADVKAYPQTLERLKAMKLPIKTVVGGHDSPLHGPELIDHYEALIKAAPQS
>NZ_CP027804.1|WP_106553362.1|4096902_4098195_-|hypothetical-protein
MHAIQDEQPDSLGRLKQAFITGMWASLASIIIGFAFKVWLAQWVAKGDLALFNSVVDLISLSLILMTGFRSSMVVSYSQTKNDRDIINIFRYFLIGMVLLTWGLVIPYIKHGLHIRAEYLQLVGVIFGLGLKVYFTNLVAMYRMYGISNRVTWLEPLANGLLFMACYFGLGMAALPSLFYGLTFSSLGIAGYMYLHRRRAIATRPLAKVELGPEMRSYVKKSFTASLEAGASILMIYITVLLTIRHFSLDELGDFQVVVRPIFTYMTTLFVFPIYRFVLPELAVNLRSGDHRQIRLIRRWIFRLSAIVSLVFFLVMLLAGKPLVSLLFPADYLGAVPVLLHFSLFFIFMMLNGYQLAYIKAHGHFTQSLLIRAVGIVALVAAYYLVARFTTNVVAIIVALGLGYLVMFVLSTLAEQRILRALPPELAAAP
>NZ_CP027804.1|WP_106553361.1|4095577_4096828_+|DEAD/DEAH-box-helicase
MSIASFADLALSPRLQQTLTELGYAAPTPVQASAIPVILAGRDLMAGAQTGTGKTAAFALPLLEQLLQNPTNDAPRPIRALVLVPTRELAVQVHESVTRYAKGTDLTSTLVYGGVSIAAQVDALKAGVDILIATPGRLLDHLRQGALSLAALRHLVFDEADRMLDMGFMDEIKALLKQIPTDRQTLLFSATCDDNLFALSKVLLRDPALIEVAPRNTTAAEVEQRVYTVDSDRKLALVEHMLNVKGWAPALIFSRTRQGADKLAQQLGKAGINALAFHGDLSQGAREKVLLEFRAGTLQALVATDVAARGLDITDLNYVINMEFPFVAEDYVHRIGRTGRAGNKGLAITLFSPEDTPLLEKVEAVLDTRLPQQWFPGFEPDLTRFEPEPRRSSKSAQKQRARKQALAGNKGGKGRR
>NZ_CP027804.1|WP_042065524.1|4094713_4095364_+|DUF799-domain-containing-protein
MKMPALFSLMFATLLLAGCAQRPSYDYTAFKESKPTSILVLPPLNHSPDVKAGASLQSQITLPLAESGYYVLPVAVTNETFRQNGVTEAADIHALPIKKLHEIYGADTALYLDIQNYGTSYLVVSSETVVTASARLVDLRTGKLLWEGKASASSAEQQSNSGGGLIGMLVVAVVNQIANTITDKGHEIAGITSFRLLSADMPNGILYGPHSPKYQK
>NZ_CP027804.1|WP_106553360.1|4094357_4094717_+|DUF4810-domain-containing-protein
MKQFKLFTLLAAAMLLTACAQAPRSLYNWEQYQQVVYQNMEGNETSVEEQISALEKNQQEASAKGQAVPPGFHAHLGMLYAQLGKDTETRQHFETEKRLFPESAPFMNFLMSNKKGATQ
>NZ_CP027804.1|WP_106553359.1|4093674_4094346_+|hypothetical-protein
MKKFVVSCGFILMASLLAGCASESSRSLDVPKVASYQTHYQGTRSPISVGKFDNRSSYMRGIFSDGVDRLGSQAKTVLITHLQQTGRFSVLDRDNMDEIKAEAGIKKQAQALKGADYVVTGDVTEFGRKEVGDHQLFGILGRGKSQIAYAKVNLNIVNVTTSEVVFSAQGAGEYELSNREIIGFGGTASYDSTLNGKVLDLAIREAVNNLVNGIETGAWHPAQ
>NZ_CP027804.1|WP_106553368.1|4106124_4106691_-|TetR/AcrR-family-transcriptional-regulator
MRSAEFNRDDVLRNAMEAFRAKGYAKTTMQELVAATGLHPGSLYAAFGNKRGLLLAAVDHYVQEKSALRRSCFAAASPLAGVQAYLEQVVNDALCGTCLVTRTLMELAEQDEELHLKLKAIYGELDADLAAVLTLALERGELAAGRDIPTLTAFLLINIQGLVTFAQCRPDPALLGGVVTQLMTALRA
>NZ_CP027804.1|WP_106553369.1|4106795_4107917_+|alkene-reductase
MLVQKRLAHKTKNVLNARSRITPSGQTIMNTLFQPYRLNDTLTLANRFMMAPLTRCMAGPGLVPTEQMAAYYARRADIGLIISEATIIRPDGQGYPNTPGLYSAEQIAGWKKVTGAVHANGGKIFAQLWHVGRLSHPFFHHAEVLAPSAVAHEGTVPRMRELVYQVPRALTEGEIAQLVEDYAQAAANAIEAGFDGVEIHGANGYLIDQFLHHASNLRTDNYGGSPENMSRFALEVVDAINARIGADRVGLRLSPGAYVHLEGDARDRAVFDHLLAELNQRNLAYVHLGIFDDSLTFDYLDGRASDYLRARYDGHLVGVGNYSAETAAEAIKADRFDLVAIGRPLIANPDYLAKVKQGDALVPYTDTMLAELV
>NZ_CP027804.1|WP_106553370.1|4108121_4109060_+|bifunctional-helix-turn-helix-transcriptional-regulator/GNAT-family-N-acetyltransferase
MDPRPLRALSRDLVRELGMLSQQCGELALSPLEAHLLIELESGPATNQQLAERLRIDKSNASRPLARLAERELISWHPHPSDGRSKEARLTIAGQAQLLDLHQEMDSAMEETLAQLTLAEREQLWTGLRLYRSALSRARRQQGYRIRPITAADNPHIAAVIRAVSAEYGLTADKGYGVADPNLDRLHETYQGAQSRYWVIEGPDGTILGGGGIAPLAGEEGQVCELQKMYFMPSLRGLGLGRRLVLQALDEARTLGYQRCYLETTAVLREATALYESLGFEHLPGPLGCTGHDACEICMVLALGADDGQRPA
>NZ_CP027804.1|WP_106553371.1|4109117_4109576_-|carboxymuconolactone-decarboxylase-family-protein
MSTRIDYPDFRQLLPAAHDALIAAGKAVDEAGLDKSLSELVKLRASQLNGCSFCLQYHLNIARRSGVGQAKLDQLAAWRDATVFSAPERAALAWTESLTRLPPDGVPDVLYGELREHFSEAQIVQLSVTVATINSWNRLGVALRFVPPAAQL
>NZ_CP027804.1|WP_106553372.1|4109638_4110133_+|MarR-family-transcriptional-regulator
MINKPPLSTELSIPLPAPGEGKRGEAGHLGYLLRQAAAAQRLRMERALADLPITAPQFALLTMLDAYPGSSNAELARLTLLTPQTVSPMVTSLERSGLLARTPHLQHGRIQQLSLSPAGATLLAEAKARVARLEQELAAPLAEEELLLVKRWLANLASGMEGEA
>NZ_CP027804.1|WP_106553373.1|4110199_4110538_-|steroid-delta-isomerase
MSVELPVEAQFNAYNAHDLEAFLACFCEAFKGYRMPTESPSTVGKGALRAFYAEHRFNNPALRAERLSRTVIGNKVFDHELIYGLSPEPLESMAVFEVEAGLIKTAWFYFPT
>NZ_CP027804.1|WP_085946238.1|4110707_4112297_-|peptide-chain-release-factor-3
MMSAEFLSEVSKRRTFAIISHPDAGKTTITEKVLLFGQAIQRAGTVKGRGSGQHAKSDWMEMEKQRGISITTSVMQFPYADCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDREVRDPMEVMDEVERELNIMCAPITWPIGCGKSFKGVYHLYKDETYLYQSGQGHTIQEKRVVKGLNNPELDAAIGEDLAAQLRGELELVQGASPEFDHDAFIAGEMTPVFFGTALGNFGVDHMLDGLTDWAPSPMPRKAESREVAATEEKFSGFVFKIQANMDPKHRDRIAFMRIVSGTYSKGMKMRHVRIGKDVNISDAVTFMAGDREQAEDAFAGDIIGLHNHGTIQIGDTFTQGEDLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFRPLISNDLIVGAVGVLQFDVVVSRLKSEYNVEALYEAVNVSTARWVEGTDVKKFEEFKRKNEVNLALDGGDNLTYIAPTMVNLRLAQERHPDVQFRQTREH
>NZ_CP027804.1|WP_043127922.1|4114637_4115642_+|sensor-domain-containing-diguanylate-cyclase
MTYQELQAAYDKLLQENERLKRVAEDAREKLEAAMDGTGLCIWQNHVPTGKLIIFNRRWGAMLGYQPKELSAHFDVWREHLHPEDRERVLQAFFDHLSGKSPFYQVMHRMIAKDGKTTWVLDRGRVVERDAQGNPIRVMGTHIDITHEKEYEQQLAQLAHRDPLTGLLNRTALQRQFPQEYQAICFIDLDDFKQVNDNLGHRAGDELLIALTRRLRDCCEEGVKIGRLGGDEFVLLLPWTSDDPRTSHLARQCINAISTPFELPNGDASVGLSMGIAAIRPQDDFSTALARADQAMYRVKRSGKRGFYVSQPSGQPLLDQEQVNERGLGHQPRC
>NZ_CP027804.1|WP_106553374.1|4115651_4117106_-|ATPase-RavA-stimulator-ViaA
MLEIGMMDLGLLIGEGELAGEMALLLASTPKISEFIKRSPLQGKLLQKRIRRWSEQLGEEMRHKPVPVALEQEYRLYQAHKGLPLAELMGRLPALLDGLEQYSPFAGEARSLVRQLMAHPTDSQRQLLIEKWRTSLVGSLLQLQQQIAEAEREKQRQEIEDQLLASRTLADALDPNQISAGGLWDLAQGSWHKRSLVLVKQYARMLQREPLLAEIANLLGRSQQDNRANDSPVPPVQVHELEEAQTDDVPDDLVGIHPASDLMRLLPSEAVMLALPELELEFYRRYLERRLLSYQSRGTLPRQRIMLRTPELGGRQLQQRGPFIVCIDTSGSMGGYPEECAKALFLALLKVAMDEKRGCYLMLFSTEVATLEITADTGLDKAERFLSMSFHGGTDLVPCLEKALIKLDDPAFAKADVLVVSDFIAQSLPHSLLERMNRQRKQQTRFHAVAMSRHAKPALLRVFDNSWLLDCGLRGRLLRRWQRS
>NZ_CP027804.1|WP_106553375.1|4117158_4118805_-|DUF3763-domain-containing-protein
MPVPDNPSIGSVPMPPLASQNLRLAPIHERLPRLLSALGEGLYERQDALRLGLLAALCGESVFLLGPPGIAKSLIARRLKLAFFDARHFEYLMTRFSTPEEVFGPLSIQALKEDGKYLRLTAGYLPEAEVVFLDEIWKAGPAILNTLLTAINERQFRNGDSQHPIPMRLLVTASNELPAPDSGLEALYDRMLVRIWMDRVQEKANFQAMLASDGQSHQNLPPSVQIHGEEYLEWQEQIDRIRLPDDCFELIYQLRQQLDSQLAHSCYVSDRRWKKAVRLIKASAFFNGRDEVAPLDLLLFKDCLWHDEASRTALLEMMTEFSRLYGYQQLAMTRQLMGLREQFKQLKQSVAQRLCCKARKRQQWFGRRARGIQIPLANVRPFGKLAHFHLLTPAALDGDDPERLVETLVFDRTLLSHWHPTGEALVGWPLGNPKEGHYELVLDDELRLHVLDLQRQQIPLVLVERNPIPEVVIAPWQAALTGLLAEAGVLAQELKRQRNLFERHQQHLFIGRHWLQQVEDSFFVLNRDLDQLRTDLSHWHDRLPQLDA

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Crispr_ID: NZ_CP027804_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027804_9

4227144-4227256

Orphan

Consensus_repeat	Method
TCGTCTCGCAGCAGGAGGCATCATGGATCTGATCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027804_9

>merge|NZ_CP027804|9|4227144-4227256|CRISPRCasFinder
TCGTCTCGCAGCAGGAGGCATCATGGATCTGATCGCACTGTCGCGATTGCGGGTGAGTGGTCGCCATCCGGCCCGCCTCGTCTCGCAGCAGGAGGCCTCATGGATCTGATCGC

>NZ_CP027804|9|9|4227144-4227256|CRISPRCasFinder
TCGTCTCGCAGCAGGAGGCATCATGGATCTGATCGC	ACTGTCGCGATTGCGGGTGAGTGGTCGCCATCCGGCCCGCC
TCGTCTCGCAGCAGGAGGCCTCATGGATCTGATCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027804.1\|WP_106553414.1\|4233205_4236376_+\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|143478
NZ_CP027804.1\|WP_011704593.1\|4223883_4224294_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350404
NZ_CP027804.1\|WP_011704589.1\|4228208_4228532_-\|DUF1820-family-protein	unknown	unknown	gnl\|CDD\|370154
NZ_CP027804.1\|WP_106553409.1\|4219564_4223602_-\|pullulanase-type-alpha-1,6-glucosidase	unknown	unknown	gnl\|CDD\|273974
NZ_CP027804.1\|WP_029301931.1\|4224357_4225317_-\|CDF-family-Co(II)/Ni(II)-efflux-transporter-DmeF	unknown	unknown	gnl\|CDD\|224151
NZ_CP027804.1\|WP_106553406.1\|4212276_4213770_-\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|277335
NZ_CP027804.1\|WP_029304558.1\|4225833_4227030_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_CP027804.1\|WP_106553415.1\|4236471_4237815_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372673
NZ_CP027804.1\|WP_106553412.1\|4228724_4229576_-\|YjjW-family-glycine-radical-enzyme-activase	unknown	unknown	gnl\|CDD\|274938
NZ_CP027804.1\|WP_016349389.1\|4216240_4216741_-\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP027804.1\|WP_017408985.1\|4232468_4232960_-\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|225577
NZ_CP027804.1\|WP_106553407.1\|4213966_4215187_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP027804.1\|WP_106553418.1\|4238830_4241026_+\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|371457
NZ_CP027804.1\|WP_085734240.1\|4231256_4231598_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377512
NZ_CP027804.1\|WP_106553413.1\|4229613_4231140_-\|YjjI-family-glycine-radical-enzyme	unknown	unknown	gnl\|CDD\|182879
NZ_CP027804.1\|WP_106553416.1\|4237835_4238498_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027804.1\|WP_106553408.1\|4215356_4216178_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366132
NZ_CP027804.1\|WP_106553410.1\|4225388_4225664_+\|metal/formaldehyde-sensitive-transcriptional-repressor	unknown	unknown	gnl\|CDD\|197388
NZ_CP027804.1\|WP_011704586.1\|4231600_4232320_-\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP027804.1\|WP_106553850.1\|4216877_4219373_+\|zinc/cadmium/mercury/lead-transporting-ATPase	unknown	unknown	gnl\|CDD\|236827

Protein	Function_ID	Function_description	E-value
NZ_CP027804.1\|WP_106553414.1\|4233205_4236376_+\|S41-family-peptidase	gnl\|CDD\|143478	cd07562, Peptidase_S41_TRI, Tricorn protease; serine protease family S41. The tricorn protease (TRI), a member of the S41 peptidase family and named for its tricorn-like shape, exists only in some archaea and eubacteria. It has been shown to act as a carboxypeptidase, involved in the degradation of proteasomal products to preferentially yield di- and tripeptides, with subsequent and final degradations to free amino acid residues by tricorn interacting factors, F1, F2 and F3. Tricorn is a hexameric D3-symmetric protease of 720kD, and can self-associate further into a giant icosahedral capsid structure containing twenty copies of the complex. Each tricorn peptidase monomer consists of five structural domains: a six-bladed beta-propeller and a seven-bladed beta-propeller that limit access to the active site, the two domains (C1 and C2) that carry the active site residues, and a PDZ-like domain (proposed to be important for substrate recognition) between the C1 and C2 domains. The active site tetrad residues are distributed between the C1 and C2 domains, with serine and histidine on C1 and serine and glutamate on C2.	1.43744e-60
NZ_CP027804.1\|WP_011704593.1\|4223883_4224294_+\|hypothetical-protein	gnl\|CDD\|350404	cd14556, R-PTPc-typeIIb-2, PTP domain of type IIb (or R2B) subfamily receptor-type tyrosine-protein phosphatases, repeat 2. The type IIb (or R2B) subfamily of receptor protein tyrosine phosphatases (RPTPs) include the prototypical member PTPmu (or PTPRM), PCP-2 (or PTPRU), PTPrho (or PTPRT), and PTPkappa (or PTPRK). They belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Type IIb RPTPs mediate cell-cell adhesion though homophilic interactions; their ligand is an identical molecule on an adjacent cell. No heterophilic interactions between the subfamily members have been observed. They also commonly function as tumor suppressors. They contain an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the second (repeat 2) PTP domain.	0.000483797
NZ_CP027804.1\|WP_011704589.1\|4228208_4228532_-\|DUF1820-family-protein	gnl\|CDD\|370154	pfam08850, DUF1820, Domain of unknown function (DUF1820). This family includes small functionally uncharacterized proteins around 100 amino acids in length.	4.58371e-54
NZ_CP027804.1\|WP_106553409.1\|4219564_4223602_-\|pullulanase-type-alpha-1,6-glucosidase	gnl\|CDD\|273974	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP027804.1\|WP_029301931.1\|4224357_4225317_-\|CDF-family-Co(II)/Ni(II)-efflux-transporter-DmeF	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	9.72781e-74
NZ_CP027804.1\|WP_106553406.1\|4212276_4213770_-\|alkaline-phosphatase-family-protein	gnl\|CDD\|277335	cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.38067e-44
NZ_CP027804.1\|WP_029304558.1\|4225833_4227030_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_CP027804.1\|WP_106553415.1\|4236471_4237815_-\|hypothetical-protein	gnl\|CDD\|372673	pfam13688, Reprolysin_5, Metallo-peptidase family M12.	2.39483e-22
NZ_CP027804.1\|WP_106553412.1\|4228724_4229576_-\|YjjW-family-glycine-radical-enzyme-activase	gnl\|CDD\|274938	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family. Members of this family are radical SAM enzymes, designated YjjW in E. coli, that are paired with and appear to activate a glycyl radical enzyme of unknown function, designated YjjI. This activase and its target are found in Clostridial species as well as E. coli and cousins. Members of this family may be misannotated as pyruvate formate lyase activating enzyme. [Protein fate, Protein modification and repair].	3.3944e-142
NZ_CP027804.1\|WP_016349389.1\|4216240_4216741_-\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	5.56177e-96
NZ_CP027804.1\|WP_017408985.1\|4232468_4232960_-\|L,D-transpeptidase-family-protein	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	3.91401e-35
NZ_CP027804.1\|WP_106553407.1\|4213966_4215187_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.98682e-130
NZ_CP027804.1\|WP_106553418.1\|4238830_4241026_+\|glycoside-hydrolase	gnl\|CDD\|371457	pfam11308, Glyco_hydro_129, Glycosyl hydrolases related to GH101 family, GH129. This family of bacterial and lower eukaryote glycosyl hydrolases is related to CAZy family GH129,and distantly to GH101, and is made up of sub-families GHL1-GHL3.	5.56369e-176
NZ_CP027804.1\|WP_085734240.1\|4231256_4231598_-\|hypothetical-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	1.58499e-11
NZ_CP027804.1\|WP_106553413.1\|4229613_4231140_-\|YjjI-family-glycine-radical-enzyme	gnl\|CDD\|182879	PRK10977, PRK10977, hypothetical protein; Provisional.	0
NZ_CP027804.1\|WP_106553408.1\|4215356_4216178_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|366132	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3.	3.05601e-05
NZ_CP027804.1\|WP_106553410.1\|4225388_4225664_+\|metal/formaldehyde-sensitive-transcriptional-repressor	gnl\|CDD\|197388	cd10153, RcnR-FrmR-like_DUF156, Transcriptional regulators RcnR and FrmR, and related domains; this domain family was previously known as part of DUF156. This domain family includes various transcriptional regulators that respond to different stressors. It includes Escherichia coli RncR (formally known as YohL, nickel and cobalt-sensitive), and E. coli FrmR (formally known as YaiN, formaldehyde sensitive). Escherichia coli RncR represses expression of the gene encoding the nickel and cobalt-efflux protein RcnA; RcnA may act through modulating NikR, to repress the NIkABCDE nickel transporter. In vitro, purified RncR binds to the rncA promoter DNA fragment in the absence of Ni2+ or Co2+, and the affinity of RncR for this promoter is reduced in the presence of excess nickel. Escherichia coli FrmR regulates the formaldehyde degradation frmRAB operon. This family belongs to a larger superfamily that includes CsoRs (copper-sensitive operon repressors). CsoRs form homotetramers (dimer of dimers). In Mycobacterium tuberculosis CsoR, within each dimer, two Cys residues on opposite subunits, along with a His residue, bind the Cu(I) ion (forming a triagonal S2N coordination complex, C-H-C). These residues are conserved in the majority of members of this superfamily. In this family, however, not all these residues are conserved; in E.coli RcnR and FrmR there is a His or a Thr instead of the second Cys (C-H-H or C-H-T) respectively. For E. coli FrmR, an N-terminal His residue, not conserved in all members of this family, is also involved in metal binding (H-C-H-H). A conserved Tyr and a Glu residue that facilitate allosteric regulation of DNA binding for CsoRs are poorly conserved in this family.	2.19403e-38
NZ_CP027804.1\|WP_011704586.1\|4231600_4232320_-\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	6.03332e-48
NZ_CP027804.1\|WP_106553850.1\|4216877_4219373_+\|zinc/cadmium/mercury/lead-transporting-ATPase	gnl\|CDD\|236827	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional.	0

>NZ_CP027804.1|WP_029304558.1|4225833_4227030_+|aspartate/tyrosine/aromatic-aminotransferase
MFEHVDAYAGDPILTLVETFHKDTREQKVNLGIGLYYDEQGRIPLLASVQQAEAQRAAAPAPRPYQPMEGAANYRTAVQHLLFGADHEAVKAGRIATIQTIGGSGALKIGADLLKRYFPTSEVWVSNPTWDNHKAMFEGAGIKVHDYPYYDAATGGVQFDAMIDCLSSLPAKSIVLLHPCCHNPTGVDLSRAQWDQVIALVVEKNLIPFMDIAYQGFGDGLEEDAYAIRAMVAAGVSFFVSNSFSKNLSFYGERCGGLSVICQDAEEASRVLGQMKATVRRNYSSPPTHGGQITAAVMNDASLHAMWVGEVTEMRTRIKAMREKLFEVLSAKVPGRDFGYFINQRGMFSYTGFTPEQVDRLREEFAVYLVRSGRMCVAGLNSRNVDYVADAMAAVLKG
>NZ_CP027804.1|WP_106553410.1|4225388_4225664_+|metal/formaldehyde-sensitive-transcriptional-repressor
MSHTIHGKKKLLARVRRIKGQAGALESALEQESDCAAILQQIAAIRGAVNGLMLEVLEGHMREHLGAEEATHAERLEDLDQVVRVLRSYLK
>NZ_CP027804.1|WP_029301931.1|4224357_4225317_-|CDF-family-Co(II)/Ni(II)-efflux-transporter-DmeF
MSSLASSHCHQPVVHEGNPLAEQKTRWAVLLTVIMMVAEIGGGWFYNSMALLADGWHMSSHALALGLSVLAYRAARHFARDHRFSFGTWKIEVLGGFTSALLLVGVAGMMLFESVFRLLDPSPIHYQQAIVIAIVGLLVNLACAWLLKDDHGHHHGHGHDHHHDHHDHAHPHDHGQHHGHQDLNLRAAYIHVLADAATSVLAILALVGGMLWGADWLDPLMGIVGAGLVAVWAWGLLRDSGRVLLDAEMDAPLVEEIREVIAELPDAEVRDLHVWRVGQQQYACVLSLLMAAPVSASEIRARLAIHEELVHVTIEVSAA
>NZ_CP027804.1|WP_011704593.1|4223883_4224294_+|hypothetical-protein
MKRIEEQARRLDQEYQEIAQLFDQFCQQAGTLAEQYHFFNWPDYEDTPPLARAFTLLGEPRELRLRCQPGERGSLSGLIQVCGEEGTIHASLGFRADGHLLLESGRLLDNPPELLLKLLLGAIWQHKPEDVQGQPH
>NZ_CP027804.1|WP_106553409.1|4219564_4223602_-|pullulanase-type-alpha-1,6-glucosidase
MDMKKTKVALVTASLLALLSGCNDNSSSPSTPDPTDGPVARLPNVQPPAEQLVAGPDQAVIALVDTQTSAARGVTGPFANYSLHLWNNDACSATAESGLNAGWDDKVNTPAATDGFGPSWVVPLSKLEGCINFIARNGDLANLTGSDMKVVFSDHPDRTVAIVAGKNEIFGSRAEAFTAAFGVAGASAHLIDGNTLIWQGGKDKPHVRLYYTESGTIKANAEGVFDFPYITLAPTSLTAEQQAKYPHLKDAAAFALPAGKDLKPLLKGELVAIGTDADGILQGATLVQSAGALDALYSEAATKLTYGAVVEGGNVTFRLWAPTARSVKLALFDGQHKPLGERTMTLDEASGSWSVQGGSELVGKFYRYDIQVYHPVSRKLESYQVTDPYSLSLAMNSEFSQVVDLNDPALKPEGWDSLKAPHSQQNPADITIYEAHVRDLTGNDDSTPAEHRGKFLGLTDTDTAPVKHLQALAKSGVSHLHLLPVFDIATVNEDPAKVANISDDFGKLCQVNPEVQNSKFAGYCSSGQTIEAVLGDLQGSDSKENPQVQELYGYLRGVDSFNWGYDPYHYTTPEGSYATNAEGSQRILEFREMVKAIKQNIGMNVVMDVVYNHTNEAGLGPKSVLDKIVPWYYQRLNPETGSVENSTCCSNTAPEHAMFAKLMDDSLVTWARDYKIDAFRFDLMGHHPKDQMVQALAAVKKVNPEMYFYGEGWNFGEVQDDKRFVQATQKHLAGTGIGSFSDRLRDAVRGGSPFDGGDTIRKTQGFGNGALVDANEMDGVDRATALHQADLVRLGMAGNLKDFILTDKDGMPKKGSDIDYNGQPAGYAQDPTEIQNYVDKHDNQTLFDNLIYKAPQGADLVRMQGVSLATAMLGQGIPFTHAGVELLRSKSMERDSYDSGDWYNRVDYTLADNNFNKGLPRKDKDGDNYPLIEKVLGKHVKPSGADMATMVGFYQELAELRQSSRLLRLGSGAEVIKRVDFRNTGPDQEPGLIVMTVDDGINAGADLDPAIDGLVVMINATNAPQSISDFRDGNDQPIDLTSLQLSPAHHGGESIARDAAVNGGTLTLGAWSAAVFVKPQSGAQGTGLPVGKKTDLSTVPPFGDTAVYLKGFLNEWGNTNQMTFSSNFMYEFTTEVSSDKLGTTNVKIADASWGPLNYGSCNAGDKLVVGTPLTLCKGGDTGNIGLDLAKAGSYKFVFTAMNKDKPTLSVSFTEPVQSCKVLDTVAGNPLGYNLFVKGELSGWAAQPQYQLSYKGMDGDLAIYQAAFNYTGSTEFKVANEDWSKEYLLNGGGAVTAETGYAIGFSQPGSANNSITLPQGLWSVLVKVDPAGTKAGTAVIQECSAK
>NZ_CP027804.1|WP_106553850.1|4216877_4219373_+|zinc/cadmium/mercury/lead-transporting-ATPase
MDLTPRFTLGSVIEDLAPAGSIQEGLIMSKSCCSHQHAAAPIKAVSKSAAPQAEHQHDSHCCDQAAPVSCCASQAPHDHQDHAASDAPEGEEPPRGGCCATPPPAHNHAHDGEHDHHEHAVAAEPPLDAPEQNSRRHSWQVLGMDCPSCARKIETAVSRVSGVQQARVLFATEKLVVDLAPGLSPDPVTAAVLAAGFQLKGERSGKQEPGRERGPLQTLLAKYWQPLSLAGLMLVAALLPSQIGQPLFTLATLWGLWPISRKAWALTKSGSPFAIETLMTVAAVGALFLGETAEAAMVLLLFMLGEHLEAYAAGRARAGITALMALVPDKALRIRITAEGEVREEVAADQLRPGDIIEIAPGARLAADARLLDALGAFDESALTGESIPVERRQGDKVPAGSLAADRVLRLEVVSEPGNNAIDRILHLIEEAETQRAPIERFIDRFSRWYTPAMMLVALLVVLVPPLAFGQSWDEWVYRGLALLLIGCPCALVISTPAAVTSALAAATRQGALIKGGAALERLAHIDTVAFDKTGTLTLGKPQLTELVSLNGQPEAELLALAAAIEQGSHHPLARAVVTAASERGLSLAAAQELRALPGMGVEGRIDGTLWQLLAPSRVATLDAAMQSRVATLEQQGKTVVVLGQPDAAPAALLALRDQIRPEAAAALQELNQLGLQSIMLTGDNPRAAEAIAGELGMGWRAGLLPEGKVDEIAKLGLSQKVAMIGDGINDAPAMKRASIGIAMGGGTDVALETADAALTHNQLGGVAAMIRLSRAALANIHQNIALALGLKAIFLVTSLLGITGLWIAVLADTGATALVTANALRLLRKR
>NZ_CP027804.1|WP_016349389.1|4216240_4216741_-|thiol-peroxidase
MSNSVTLQGNPVSVAGHFPVAGEQAKPFSLVAKDLSDLTLASFAGQRKILNIFPSVDTPTCATSVRKFNEQASALNNAVVLCISADLPFAQSRFCGAEGLDKVVTLSTLRGAAFLQDYGVAFSSGPLVGLAARAIVVLDEENKVLHSELVAEVADEPNYAAALAVL
>NZ_CP027804.1|WP_106553408.1|4215356_4216178_+|transporter-substrate-binding-domain-containing-protein
MTRHPSLLLLLLLLCLTGLTSLSLSRADTAAAPAAKPVRILNAHLGELPGLINADKTGPFVDLVRAIDDLYPEVSIRITIYPLARAMAGVIAGTADFSLPAIRNLQDADLLPYRFSTRSFGKVTHVLYSNTDHLITPDMAYGIVPTKRDLLIEATPGFLPIPLQRSMSIEQSLRKLARGRIDAFIWAQEEADLMLRQLKLTNIHREHLGDFEDVFIIAKGPAGDEVDRFLGEAIDRLAASGKLAEIYSRLHRPYVEWQPHPEPLPAKDVTKAP
>NZ_CP027804.1|WP_106553407.1|4213966_4215187_-|DEAD/DEAH-box-helicase
MTFDELALAPALLATLPADLKRPTRVQQLAIPAALAGRDLLALARTGSGKTLAFGLPLLQRLDPASDRVQGLVLVPTRELAVQVSEALQGPAAGLGLRLVTLCGGVAQELQQAELALGPQLLVATPGRLRDLLAQQLLGLSQLRHLVLDEADRLLEMGFWPDIQWLLNAMPVERQTLLFSATLPAELDALATGLLTEPVRVEADPRNSVADDIEERLYLVNKSSKVPALISLLKAHEWPQVLVFISARDDADGVARKLAKAGIAVAALHGEKEQAVREQALGDFKAGKVRVLVATDLMARGIHVEALPLVINLDLPASAPVYVHRIGRTARAGRSGLAISLTCHGEADTLAAIRNLTGRELPLTELAGFPVTDQPASGEGKRAPRDKQANRRTQAKRSVKQFKSKG
>NZ_CP027804.1|WP_106553406.1|4212276_4213770_-|alkaline-phosphatase-family-protein
MASLVMGPLLGLEAETQYSICFLVGPECKGAGVRINGSLLAAGKQADTPRGGFWRVSWTATSAEAGSSVEYQILLDGETARDLAGEDRWQFHLPGSAERVRIGYASCNGFSDFKLLTSTPQPYVMWDKLAAEHATHPFSLLLMGGDQVYADSLWTTVPSLKAWNELDMAEKVKRKATRTMEEQLDRFYCDLYCKQWGRPEVARLLARIPSAMMWDDHDIFDGWGSYPQSPENLQGCDVYKAIYAAASRYFRLFQLRSVANVSLLDPVKLGHHSWRLSFRGYQILALDNRANRTRAQVMSPSQWDQINDALAACNAGHLLVLAGVPVVYRDFSFTEAALDATPWEEELTDDLKDHWRAKDHQGERARLIMRLLDNAKLRRQQDAGCKTLILSGDVHVGCLGVIQDKRDGVLNVHQLVSSGIVHPCPTQFQWMGILAMTNDDAEYLDENRLIRAELIKPFGAPVYLRTRNFATLLMGTDNKLWANWHCENGLAASYPLA
>NZ_CP027804.1|WP_011704589.1|4228208_4228532_-|DUF1820-family-protein
MSESNALYRVQFICHNERYEVYVREVSQGQLFGFIEIANFVWDNHTALIVDPSHEKLKSEFADVNRTMIPMHHVLRVDQVRKQGAARITELGNNVSPFPSPIYTKKP
>NZ_CP027804.1|WP_106553412.1|4228724_4229576_-|YjjW-family-glycine-radical-enzyme-activase
MSRWLPFSCVDGPGNRLVLFLQGCNFACPGCHNPHTIGLCDHCGDCVPGCPSGALTLHEGRVSWQAAHCTDCDACLDACPRSASPKTATMTVAEVLALLRRYGPLLTGITVSGGEATTQLPFVIALFTAIKGAPDLAHLGCLLDSNGSLAEAGWQRLLPVLDGAMIDLKGWGDSVHHTLTGYGRERVLASLQLLAQAGKLAEVRLLQVPGQSDYLAADGALEAGLAAFLRALGPVPIRLNGFRHHGVRRAAQGWPEAAREELEQLAAALAVAGLGPVSLPPLL
>NZ_CP027804.1|WP_106553413.1|4229613_4231140_-|YjjI-family-glycine-radical-enzyme
MSFTETCQRIVRDPLLSPAQKSHALALAAENALPYPELPAEVSEAMAKGFVCDMFEGHAPYKPRYVLPDYEKFLRQGSAWLELAPPQDFDEALDALRILYHHVPSVTGMPVWLGRLDHLLLPFVGELDDEALYRKLKGFWIYLDRVLPDAFMHVNIGPDDNRLCRLILRIDGDLKQVAPNLTLFHDPAQTPDSLLLQGVKNIAACSKPHIANYPLHRNTFDERGFGIVSCYNALPQAGGANTLVRLSLKRVAEQAHGIDDFLGCLLPHYCRLASRLIEARAAFLHQESGFFDSFLVQEGLLEEDRFVPMFGIYGMAEAVNLLMDKENLPERYGRDEEANQLGYRISAQLARHVSETPQRHAWGGRALLHSQGGLSVDRGVTPGVRIPYGEEPDPASHVLALAPHHGFYHSGISEILTLDPTIRQNPQALLQLCKGALAIGMREFTANVADSDLVRVTGYMIRKSDVARFATEGSRLQTTCLGAEASELTGIRQRAPRVVGREATLCDY
>NZ_CP027804.1|WP_085734240.1|4231256_4231598_-|hypothetical-protein
MSWLMIGLLAMITFFNRFAFFSRLTRYQPGAEMGAFLSFSAQSVLTAIWLPIVFSYQPGTGLSWDPDYLVATLLVTALTLLRLPTLLVVVVGMGGFFLLRWQGGVAQLLPWPG
>NZ_CP027804.1|WP_011704586.1|4231600_4232320_-|AzlC-family-ABC-transporter-permease
MPSATCSRPVGAESTRALWWRASIDILPLSVSVIPWGILCGALALQVGLSPLQAQLMSLLVYAGAAQLSATTLFGAGTPLLPIMGSTFVITSQHLLYGFTFRRDVLPLSLRWRASLAFFLTDEMFAVALKDRERSGRFDPAYALIAGFVFYLFWNAATLLGIAAGQYIDGLDQMGLDFAIAATFIAMTIPAMKNLPMVAATLVSGAMALLTKPLLAEVYIIISALSGMLVGYVLHRMRR
>NZ_CP027804.1|WP_017408985.1|4232468_4232960_-|L,D-transpeptidase-family-protein
MPRDGMRAVLLCLLGLWPALSFATLSADMVVVKKSSYSLTLMKDGKEVKRYWIALGPAPKGHKQREGDQRTPEGRYILDYKKTNSNYYKAIHINYPNLDDIKAANEMGVRPGGMIMIHGQRNSIGNTRLQPSNWTNGCIAMLNKDLDEVWNAIEPGTPIIIQP
>NZ_CP027804.1|WP_106553414.1|4233205_4236376_+|S41-family-peptidase
MRYRLSLLLLLLCSPLQAAEPLWLREPALSPDGKQLAFTWQGRVYLSAGDGGPAMPLTDGNYLSQRPIWSPDGKLIAFAANLYGNEDVFVVPSRGGEMVRLTRDSRPDLPQAFSADGKQLLLSSQRLTDPDADHFVAEGYQAGNLYWTPVAGGPLTPAQPLPATLARPHGNQLAYQMPGMDQPFRKHQHSFAVSRLWLFDGKQHRQLTEDRVAASDPVWDEQGKQLYYLSERSGDFNVWQRDLASGQDRQLTHFKGHPVRGLSASRQGDLVWSWQGELYRLDAGSDTPRKLVIQPLFAKVPTEQSWQPGPVDEAIARQDGEEVILVSQGDLYAVDTRRERVRQLTRHPSEQSAPRYLDKEQELIYLSEQEGPAALYRLKKGQPDKLFSDPGTLTEEKLLAIPGAAISVPTLSPDGKQLAFVVDGQAVHLLDLASGKQRQLVAAEFNPSRHAVELAFAPDSRHLALTIQPDSAQQEIAVIDTRDAKAKPVNVSLNGYRDGEPAWSQDGGILYWQSTKYGVLGADGEPLGGSLLGLYSSRAAKSDVIAEQAPPKAGYGFEADRLAHREALQLQPEGPILASRIVDDHLIYLVEVMDANGESEIKGYAQDLRKGETKLLFAEQPGPALASLNQDASLATLVREGEIALIDTRSGEASSHPFNLLITASWQDRMSAAFDQITRLTRDEFYRADMNGVDWDGYVAAYRRLLPGISNDRDFGNLLAELAGELNVSHTWGSGPAPSLRMPDDTASLGGYWRERQGAVELDALLAGGPLEQETDLAPGARLLAVNGTELHSLNELDALLNHQAGQRLALTVLPKGAKEPSQLEVTAIDLQQEYQLQLDGWIAKRRSQVEQLSQGRVGYVYLPEMSSAVYEEVVADALGRQRNREALIVDVRFNKGGYLANTLVEFLTGSGSAQGMARSWPRLGKGETDAATRQWTKPSVVLVNAGSYSEGSAFPQYYRTLKVGPIVGEPVPGTGTMVYAHTSRLIPGLAYGIPTLGLRNPDGSLYENQELIPDVQVALTPADMLAGRDPQLAAAVQAALAQLTVNAKPAAKQVD
>NZ_CP027804.1|WP_106553415.1|4236471_4237815_-|hypothetical-protein
MQKTTLGIMIAGLLGATPVLAETIDLMVLHSPGLAARYQGDAQTRIQHMINVTNQIYAASGLDLTVRAVHDQQVNYPDGGTDKSALNAVTYQQDPAFKQVPTLRTRYGADMVVLMRPQTGDHGSCGLAWVGGSATYTDGSKAYADGDVSQDAGSMFSHVTATGCGDVVLAHELGHNMGLNHSRLQDGTGGTYHYALGHGVRGSFATVMAYPSSFGVYSHEYKFSSPDLVCKGQPCGVDYRDQANGADAVRALKVTTPQIAAFYPTMVSEELPDLGELERSLETRRQDLAAAQEHYSQQVAARTALQDRQQTLKGNFDRYQRELNQLNQRNRQTVQEINRLVREHNSYNGSYGPQEYRRIRAIQANLSARIDQLHDENNAIIRQSNEISQRYQAEVNEYNGSWDRYNQLVAAVKSADGKVDEARRELELAEHRYQLALARQPAETQPA
>NZ_CP027804.1|WP_106553416.1|4237835_4238498_-|hypothetical-protein
MKRAKWKPWLGLCALLAGVIGWYLWPQAVAPGQAAAGGEEGVADSGPLAELTPLAAMPAPVLKPAPSGTPAKPDRLREDGSQQLETPWQAAEVDADFPLAEPGDAVEQPQPIALQGSDLEQAQVGDSVALPMPDGSTLQARVTKVELQRGGERNWQGEIRVDGDSYPVNFTVGKQATFGFIGTPQGSYSVETLGGKGWVYKNPPLDLGHGGDDALIPTHQ
>NZ_CP027804.1|WP_106553418.1|4238830_4241026_+|glycoside-hydrolase
MNGLPIRAPALGWLLISLLAAPLAAAPLTLQGETQRYRIDPDTLAISVNQIPVSAGQPARQVDQLQQGEQQASWHWPAQDARVEVKLDGDDLLLTLVSDSPRQLAWFSLPKNQTHLSLAFGEGSRFSVRDSDWLGYVGDELAELNTHYDLKLPLWSQDAGKQTYSWILQTPYDNRLRFSRQGGRLQLSASHEFSSFNQQAPMVVRLSVGDDWLAGARRYRAWLQSEGAWQSLADKVARIPAGRRLIGASHVYLWGDALLDRQDVKVWPALQAKLRQKPEWLQGFNSEEREALAAKAPEPWQQALIMAGLNRLIADQLPLPAQQGPQAQSKVLALRQQWVRSQFGEQLVAQERWGQGLSLPVIEALQQAGLRKLWLGTPQWTAALQQGYALTAAQRQGYLVGSYDSYDTAIAPGSNDSWLTAQLPPEIGKRCAIVEASGKPKPGFGGEGVYLNPGCTLPFAKSRMSELAKASGINSLFLDVDGTAMASNDYNPAHQQGSQAMIADRNARMSWVGERLGLVLGSEDGNALTSKPLLFAHGIQSWGFGWTDAAMRKQAKSPYYLGKWWPDEAPQVFFQPARLKPRYLKTVFNPADRLPLYQAVFHDSVLNSHHWLLDNLKFPGIKEERALLGLLYNTPPLVNLSRSTLASRLPELVRLDSQFGPLHEALWDKALVGFRWRDGVGRVQETRFSDGSRLVANFGHSSIMIDGHKLPGRQLLVALKDKPVSVLKIQG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3114148 : 3144810

Aeromonas_virus(85.19%)

tail,capsid,portal,terminase,integrase,head,holin

attL 3113956:3113986|attR 3148080:3148110

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3113956:3113986	attL	NA	NA	NA	NA
WP_106552899.1\|3114148_3115129_-\|integrase	tyrosine-type recombinase/integrase	A0A0F7LA05	Escherichia_phage	3.2e-94	54.3
WP_106553813.1\|3115213_3115513_-	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	1.9e-29	64.6
WP_082030449.1\|3115632_3115959_+	hypothetical protein	Q1JS60	Enterobacteria_phage	3.0e-20	63.3
WP_106553814.1\|3115964_3116516_+	hypothetical protein	A5X9F7	Aeromonas_virus	5.4e-38	55.0
WP_106552900.1\|3116529_3116955_+	hypothetical protein	NA	NA	NA	NA
WP_017412429.1\|3116994_3117180_+	hypothetical protein	NA	NA	NA	NA
WP_044801236.1\|3117203_3117470_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_106552901.1\|3118183_3118468_+	hypothetical protein	NA	NA	NA	NA
WP_106552902.1\|3118467_3121035_+	replication endonuclease	A5X9G4	Aeromonas_virus	3.9e-123	39.3
WP_106552903.1\|3121390_3123217_+	hypothetical protein	NA	NA	NA	NA
WP_158704875.1\|3123557_3123959_-	hypothetical protein	NA	NA	NA	NA
WP_106552905.1\|3124512_3124830_-	hypothetical protein	NA	NA	NA	NA
WP_106552906.1\|3125022_3125277_-	ogr/Delta-like zinc finger family protein	A5X9H0	Aeromonas_virus	2.4e-25	66.2
WP_139749304.1\|3125335_3126220_-\|portal	phage portal protein	A5X9H1	Aeromonas_virus	6.9e-128	78.0
WP_106552907.1\|3126068_3128198_-\|terminase	terminase	A5X9H3	Aeromonas_virus	5.3e-243	67.1
WP_106552908.1\|3128375_3129293_+\|capsid	capsid protein	A5X9H4	Aeromonas_virus	4.4e-69	48.8
WP_106552909.1\|3129303_3130383_+\|capsid	phage major capsid protein, P2 family	A5X9H5	Aeromonas_virus	2.5e-140	69.9
WP_106552910.1\|3130385_3131111_+\|terminase	terminase	A5X9H6	Aeromonas_virus	9.4e-99	74.1
WP_106553815.1\|3131216_3131678_+\|head	head completion/stabilization protein	A5X9H7	Aeromonas_virus	1.3e-50	69.9
WP_106552911.1\|3131674_3132190_+	hypothetical protein	A5X9H8	Aeromonas_virus	1.0e-54	57.6
WP_106552912.1\|3132215_3133340_+	DUF2586 family protein	A5X9I0	Aeromonas_virus	5.0e-184	85.6
WP_043122804.1\|3133343_3133799_+	DUF2597 family protein	A5X9I1	Aeromonas_virus	1.8e-68	84.7
WP_106552913.1\|3133809_3134019_+	TraR/DksA family transcriptional regulator	A5X9I2	Aeromonas_virus	2.7e-27	82.6
WP_064335229.1\|3134042_3134369_+\|holin	phage holin, lambda family	A5X9I3	Aeromonas_virus	4.0e-25	59.4
WP_106552914.1\|3134355_3134817_+	glycoside hydrolase family 104 protein	A5X9I5	Aeromonas_virus	9.2e-76	86.3
WP_106552915.1\|3134813_3135248_+	hypothetical protein	NA	NA	NA	NA
WP_017412260.1\|3135371_3135635_+	hypothetical protein	A5X9I7	Aeromonas_virus	4.0e-23	64.4
WP_106552916.1\|3135823_3137878_+\|tail	phage tail tape measure protein	A5X9I9	Aeromonas_virus	5.7e-202	59.2
WP_106552917.1\|3137874_3138198_+	DUF2590 family protein	A5X9J0	Aeromonas_virus	3.9e-49	90.7
WP_106552918.1\|3138194_3139376_+	hypothetical protein	A5X9J1	Aeromonas_virus	1.6e-143	65.7
WP_106552919.1\|3139368_3140052_+	hypothetical protein	A5X9J2	Aeromonas_virus	8.7e-38	51.5
WP_106552920.1\|3140036_3140792_+	permease	G0ZT38	Aeromonas_phage	1.6e-69	96.3
WP_106552921.1\|3140788_3141538_+	hypothetical protein	NA	NA	NA	NA
WP_106552922.1\|3141537_3141774_+	hypothetical protein	NA	NA	NA	NA
WP_106553816.1\|3141830_3142652_+	hypothetical protein	A5X9J6	Aeromonas_virus	1.5e-76	56.5
WP_106552923.1\|3142648_3143200_+	hypothetical protein	A5X9J7	Aeromonas_virus	2.2e-63	72.6
WP_106552924.1\|3143196_3144810_+	hypothetical protein	A5X9J8	Aeromonas_virus	6.6e-262	81.8
3148080:3148110	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3745900 : 3753402

Staphylococcus_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081396127.1\|3745900_3746485_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.3e-30	48.7
WP_106553199.1\|3746568_3747780_+\|protease	serine protease	V5LS29	Emiliania_huxleyi_virus	1.0e-09	26.6
WP_106553200.1\|3747843_3748953_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	2.1e-65	39.2
WP_106553201.1\|3749094_3749748_-	riboflavin synthase	A0A2I2L4R9	Orpheovirus	2.7e-20	36.4
WP_106553202.1\|3749802_3750912_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.6e-49	35.2
WP_010675395.1\|3751008_3751458_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_106553203.1\|3751592_3752069_-	hypothetical protein	NA	NA	NA	NA
WP_106553204.1\|3752148_3753402_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	2.3e-100	53.5

DBSCAN-SWA_3

3998558 : 4008494

uncultured_Mediterranean_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_073348937.1\|3998558_4000424_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-34	32.6
WP_106553319.1\|4000637_4002425_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	5.2e-74	41.1
WP_016349543.1\|4002513_4002957_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	1.7e-26	48.6
WP_005309452.1\|4002972_4003188_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_106553320.1\|4003367_4004381_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.0e-107	58.3
WP_011704778.1\|4004465_4005449_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	1.7e-34	34.1
WP_106553321.1\|4005496_4006537_-	peptidoglycan DD-metalloendopeptidase family protein	A0A0A7NU10	Lactobacillus_phage	5.1e-13	36.2
WP_073352336.1\|4006547_4007123_-	DedA family protein	NA	NA	NA	NA
WP_011704775.1\|4007125_4007743_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.0e-34	46.4
WP_017410638.1\|4007747_4008494_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	7.2e-70	54.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027804

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection