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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP027308 Escherichia coli strain 2015C-3108 plasmid unnamed1 0 crisprs NA 0 0 0 0
NZ_CP027307 Escherichia coli strain 2015C-3108 chromosome, complete genome 6 crisprs cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,cas14i 0 6 335 0
NZ_CP027309 Escherichia coli strain 2015C-3108 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP027307
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027307_1 39725-40119 Unclear I-E
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027307_2 65821-66093 TypeI-E I-E
4 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027307_3 1322917-1323040 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027307_4 2179507-2179598 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027307_5 2569567-2569711 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027307_6 4956556-4956673 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP027307_4 4.1|2179533|40|NZ_CP027307|CRISPRCasFinder 2179533-2179572 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_CP027307_3 3.1|1322960|38|NZ_CP027307|CRISPRCasFinder 1322960-1322997 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP027307_2 2.4|66033|32|NZ_CP027307|PILER-CR,CRISPRCasFinder,CRT 66033-66064 32 NZ_CP050442 Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence 41503-41534 6 0.812
NZ_CP027307_1 1.6|40059|32|NZ_CP027307|CRISPRCasFinder,CRT 40059-40090 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
NZ_CP027307_2 2.2|65911|32|NZ_CP027307|PILER-CR,CRISPRCasFinder,CRT 65911-65942 32 NC_010553 Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence 292180-292211 9 0.719
NZ_CP027307_2 2.2|65911|32|NZ_CP027307|PILER-CR,CRISPRCasFinder,CRT 65911-65942 32 NZ_CP020740 [Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence 20747-20778 9 0.719
NZ_CP027307_2 2.3|65972|32|NZ_CP027307|PILER-CR,CRISPRCasFinder,CRT 65972-66003 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 32377-32408 9 0.719

1. spacer 4.1|2179533|40|NZ_CP027307|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 3.1|1322960|38|NZ_CP027307|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 2.4|66033|32|NZ_CP027307|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050442 (Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

cggctatggaatttatggagaagtttggtttt	CRISPR spacer
ctcctatggaatttatgcagaagtttagtaat	Protospacer
*  ************** ********.**  *

4. spacer 1.6|40059|32|NZ_CP027307|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **  

5. spacer 2.2|65911|32|NZ_CP027307|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaggccgcagaacgccgtgatattgcgttc	CRISPR spacer
gcggcgccgaaaaacgccgtgatattgccgat	Protospacer
 **. **** *.****************   .

6. spacer 2.2|65911|32|NZ_CP027307|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaggccgcagaacgccgtgatattgcgttc	CRISPR spacer
gcggcgccgaagaacgccgtgatgttgccggt	Protospacer
 **. **** *************.****   .

7. spacer 2.3|65972|32|NZ_CP027307|PILER-CR,CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

atcaggtaatcgagacacctgtcagcactctc	CRISPR spacer
ccaaggtaatcgagagacctgccagcaaagcc	Protospacer
 . ************ *****.*****   .*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 13078 12 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_2 17936 : 18785 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_3 26319 : 29076 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_4 34465 : 39385 5 Only_Syngen_Nebraska_virus(33.33%) NA NA
DBSCAN-SWA_5 43857 : 44643 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_6 68373 : 70406 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_7 73518 : 77234 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_8 82442 : 89582 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_9 109049 : 110063 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_10 117636 : 118602 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_11 124068 : 129628 5 Pseudomonas_phage(25.0%) tRNA NA
DBSCAN-SWA_12 142444 : 147740 5 Bacillus_virus(20.0%) NA NA
DBSCAN-SWA_13 151675 : 155800 4 Clostridium_phage(50.0%) NA NA
DBSCAN-SWA_14 161110 : 249027 90 Enterobacteria_phage(72.41%) protease,portal,transposase,tRNA,tail,terminase NA
DBSCAN-SWA_15 253928 : 257671 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_16 261129 : 261390 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_17 265509 : 276817 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_18 282575 : 284087 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_19 299380 : 305837 8 Faustovirus(20.0%) NA NA
DBSCAN-SWA_20 315722 : 316154 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_21 324983 : 331280 6 Escherichia_phage(60.0%) NA NA
DBSCAN-SWA_22 337714 : 341716 4 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_23 362979 : 363693 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_24 381740 : 382691 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_25 401245 : 406184 6 Deep-sea_thermophilic_phage(33.33%) NA NA
DBSCAN-SWA_26 409662 : 425032 15 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_27 455257 : 456178 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_28 459869 : 467446 4 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_29 474099 : 475533 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_30 478572 : 479505 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_31 497380 : 498466 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_32 507021 : 508158 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_33 514634 : 516152 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_34 520363 : 522224 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_35 532783 : 536011 3 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_36 574326 : 577348 3 Cronobacter_phage(33.33%) NA NA
DBSCAN-SWA_37 580500 : 642069 47 Enterobacteria_phage(20.0%) holin,protease,integrase,lysis,transposase attL 597750:597785|attR 629635:629670
DBSCAN-SWA_38 648336 : 648954 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_39 658675 : 677817 22 Vibrio_phage(33.33%) capsid,integrase,terminase attL 658383:658408|attR 667674:667699
DBSCAN-SWA_40 683571 : 687872 4 Clostridioides_phage(50.0%) NA NA
DBSCAN-SWA_41 702353 : 703211 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_42 707280 : 711066 3 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_43 714760 : 716281 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_44 736614 : 746053 9 Enterobacteria_phage(83.33%) NA NA
DBSCAN-SWA_45 758619 : 760653 1 Indivirus(100.0%) tRNA NA
DBSCAN-SWA_46 771301 : 774858 4 Paenibacillus_phage(50.0%) NA NA
DBSCAN-SWA_47 784080 : 790954 8 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_48 804379 : 805732 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_49 810457 : 821319 8 Catovirus(20.0%) NA NA
DBSCAN-SWA_50 826992 : 844904 15 Bacillus_phage(20.0%) transposase NA
DBSCAN-SWA_51 853545 : 854445 1 Cellulophaga_phage(100.0%) NA NA
DBSCAN-SWA_52 862090 : 863257 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_53 867595 : 869760 4 Klebsiella_phage(33.33%) NA NA
DBSCAN-SWA_54 887526 : 946782 73 Escherichia_phage(36.21%) head,holin,integrase,portal,transposase,tail,terminase,capsid attL 887485:887544|attR 918845:920154
DBSCAN-SWA_55 950326 : 962798 12 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_56 980004 : 1033857 71 Enterobacteria_phage(72.73%) head,plate,holin,integrase,transposase,tail,terminase,capsid attL 999685:999744|attR 1033964:1034087
DBSCAN-SWA_57 1040763 : 1042278 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_58 1052365 : 1058012 5 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_59 1063264 : 1064998 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_60 1071614 : 1073665 3 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_61 1077683 : 1084747 9 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_62 1092210 : 1093338 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_63 1106916 : 1108392 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_64 1116448 : 1120918 7 Klebsiella_phage(33.33%) NA NA
DBSCAN-SWA_65 1128414 : 1130463 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_66 1135793 : 1136003 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_67 1141643 : 1143200 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_68 1147062 : 1155169 8 Pandoravirus(33.33%) tRNA NA
DBSCAN-SWA_69 1163542 : 1167210 3 Escherichia_phage(66.67%) transposase NA
DBSCAN-SWA_70 1172985 : 1177562 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_71 1180880 : 1181735 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_72 1184978 : 1185620 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_73 1190546 : 1192508 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_74 1198108 : 1198762 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_75 1205526 : 1206747 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_76 1214223 : 1215051 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_77 1221390 : 1223652 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_78 1234949 : 1284746 56 Enterobacteria_phage(77.5%) head,plate,holin,portal,transposase,tRNA,tail,terminase,capsid NA
DBSCAN-SWA_79 1305093 : 1310177 5 Lake_Baikal_phage(33.33%) NA NA
DBSCAN-SWA_80 1318467 : 1320735 3 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_81 1326239 : 1335043 9 Orpheovirus(20.0%) NA NA
DBSCAN-SWA_82 1343846 : 1345345 2 Indivirus(50.0%) NA NA
DBSCAN-SWA_83 1352256 : 1353531 1 Cronobacter_phage(100.0%) tRNA NA
DBSCAN-SWA_84 1373405 : 1375217 1 Vaccinia_virus(100.0%) NA NA
DBSCAN-SWA_85 1385112 : 1386414 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_86 1396514 : 1461676 72 Stx2-converting_phage(35.29%) head,holin,protease,integrase,lysis,transposase,tail,terminase,capsid attL 1401269:1401285|attR 1440518:1440534
DBSCAN-SWA_87 1466636 : 1467626 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_88 1498899 : 1502802 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_89 1506604 : 1507553 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_90 1519354 : 1529522 10 Escherichia_phage(20.0%) transposase NA
DBSCAN-SWA_91 1532903 : 1533713 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_92 1537978 : 1540081 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_93 1544987 : 1551372 2 Ralstonia_phage(50.0%) NA NA
DBSCAN-SWA_94 1557778 : 1559323 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_95 1566208 : 1566499 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_96 1572511 : 1573953 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_97 1577227 : 1579133 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_98 1583449 : 1587256 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_99 1592535 : 1599471 3 Powai_lake_megavirus(50.0%) NA NA
DBSCAN-SWA_100 1620162 : 1621375 1 Shigella_phage(100.0%) transposase NA
DBSCAN-SWA_101 1634730 : 1636149 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_102 1643894 : 1646024 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_103 1653528 : 1654419 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_104 1659785 : 1685577 33 Escherichia_phage(42.86%) integrase,tail,transposase attL 1666243:1666256|attR 1686500:1686513
DBSCAN-SWA_105 1692915 : 1702709 8 Escherichia_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_106 1709035 : 1709551 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_107 1727731 : 1728814 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_108 1742817 : 1744083 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_109 1756998 : 1833531 84 Enterobacteria_phage(40.74%) holin,protease,portal,transposase,tail,terminase NA
DBSCAN-SWA_110 1838422 : 1840437 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_111 1849847 : 1860036 10 Citrobacter_phage(25.0%) NA NA
DBSCAN-SWA_112 1866020 : 1872832 6 Escherichia_phage(50.0%) transposase NA
DBSCAN-SWA_113 1875933 : 1879941 5 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_114 1883077 : 1885829 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_115 1913856 : 1914276 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_116 1930982 : 2000757 77 Stx2-converting_phage(37.74%) head,holin,integrase,transposase,tRNA,tail,terminase,capsid attL 1944351:1944365|attR 2000859:2000873
DBSCAN-SWA_117 2004203 : 2007926 4 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_118 2015215 : 2015473 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_119 2027796 : 2029439 2 Streptococcus_virus(50.0%) NA NA
DBSCAN-SWA_120 2032711 : 2033893 2 Ralstonia_phage(50.0%) NA NA
DBSCAN-SWA_121 2046250 : 2047192 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_122 2063037 : 2063283 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_123 2067944 : 2068865 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_124 2078173 : 2078707 1 Red_sea_bream_iridovirus(100.0%) NA NA
DBSCAN-SWA_125 2082841 : 2083675 1 Pelagibacter_phage(100.0%) NA NA
DBSCAN-SWA_126 2089692 : 2162649 65 Escherichia_phage(19.05%) protease,integrase,transposase attL 2086947:2086961|attR 2160175:2160189
DBSCAN-SWA_127 2177549 : 2307307 151 Escherichia_phage(72.64%) bacteriocin,holin,protease,portal,integrase,lysis,transposase,tail,terminase,capsid attL 2215082:2215108|attR 2287930:2287956
DBSCAN-SWA_128 2311540 : 2313595 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_129 2326194 : 2328102 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_130 2344024 : 2355157 8 Bacillus_virus(20.0%) tRNA NA
DBSCAN-SWA_131 2369862 : 2374403 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_132 2379489 : 2380578 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_133 2384676 : 2387891 2 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_134 2394199 : 2417996 16 Escherichia_phage(16.67%) protease,tRNA NA
DBSCAN-SWA_135 2427293 : 2429012 1 Yellowstone_lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_136 2432599 : 2435337 4 Roseobacter_phage(50.0%) NA NA
DBSCAN-SWA_137 2438675 : 2447825 11 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_138 2456391 : 2457594 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_139 2468938 : 2470810 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_140 2474025 : 2482363 6 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_141 2487360 : 2492585 7 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_142 2496125 : 2510938 13 Erwinia_phage(14.29%) NA NA
DBSCAN-SWA_143 2521535 : 2522444 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_144 2528925 : 2530215 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_145 2534014 : 2568083 43 Enterobacteria_phage(55.26%) head,holin,integrase,transposase,tail,capsid attL 2541684:2541700|attR 2573475:2573491
DBSCAN-SWA_146 2577885 : 2584458 7 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_147 2588813 : 2589866 1 Klebsiella_phage(100.0%) NA NA
DBSCAN-SWA_148 2627734 : 2628526 1 Kaumoebavirus(100.0%) NA NA
DBSCAN-SWA_149 2631904 : 2634846 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_150 2638929 : 2647714 5 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_151 2650969 : 2651647 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_152 2658302 : 2659067 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_153 2663217 : 2667031 2 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_154 2671657 : 2673322 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_155 2677418 : 2678498 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_156 2686394 : 2689927 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_157 2696865 : 2699448 1 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_158 2706458 : 2708898 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_159 2713713 : 2714360 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_160 2729785 : 2731900 2 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_161 2735009 : 2736230 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_162 2751371 : 2757414 3 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_163 2768843 : 2771987 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_164 2775257 : 2868132 79 Escherichia_phage(33.33%) head,protease,transposase,tRNA,tail,capsid NA
DBSCAN-SWA_165 2874761 : 2886976 12 Acanthamoeba_polyphaga_moumouvirus(20.0%) transposase NA
DBSCAN-SWA_166 2892871 : 2896021 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_167 2904856 : 2908403 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_168 2911726 : 2912422 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_169 2915550 : 2920597 4 Bacillus_phage(25.0%) protease NA
DBSCAN-SWA_170 2944428 : 2953409 10 uncultured_Mediterranean_phage(60.0%) tRNA NA
DBSCAN-SWA_171 2960361 : 2970334 7 Bacillus_phage(60.0%) NA NA
DBSCAN-SWA_172 2974623 : 2975739 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_173 2983154 : 2987702 4 uncultured_Caudovirales_phage(50.0%) transposase NA
DBSCAN-SWA_174 2991818 : 2992586 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_175 2997882 : 2998992 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_176 3002169 : 3004130 2 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_177 3009540 : 3013820 2 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_178 3017660 : 3023357 4 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_179 3031733 : 3036271 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_180 3048265 : 3058741 5 Escherichia_phage(33.33%) holin NA
DBSCAN-SWA_181 3064316 : 3067242 3 Erysipelothrix_phage(50.0%) transposase NA
DBSCAN-SWA_182 3081047 : 3090850 8 Enterobacteria_phage(28.57%) integrase,transposase attL 3083717:3083730|attR 3097246:3097259
DBSCAN-SWA_183 3095527 : 3096694 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_184 3119977 : 3122935 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_185 3136803 : 3140722 6 Clostridioides_phage(50.0%) NA NA
DBSCAN-SWA_186 3148079 : 3154535 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_187 3165498 : 3168318 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_188 3178747 : 3186600 9 Bradyrhizobium_phage(25.0%) NA NA
DBSCAN-SWA_189 3193259 : 3194291 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_190 3207251 : 3211367 2 Saccharomonospora_phage(50.0%) NA NA
DBSCAN-SWA_191 3220195 : 3220954 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_192 3233552 : 3234977 1 uncultured_Mediterranean_phage(100.0%) protease NA
DBSCAN-SWA_193 3238906 : 3239251 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_194 3245162 : 3245960 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_195 3251139 : 3257945 6 Acanthamoeba_polyphaga_mimivirus(50.0%) tRNA NA
DBSCAN-SWA_196 3267851 : 3268754 1 Sodalis_phage(100.0%) NA NA
DBSCAN-SWA_197 3272016 : 3278484 5 Anomala_cuprea_entomopoxvirus(33.33%) NA NA
DBSCAN-SWA_198 3286229 : 3287654 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_199 3296281 : 3296833 1 Sphingobium_phage(100.0%) NA NA
DBSCAN-SWA_200 3301078 : 3302122 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_201 3328096 : 3329821 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_202 3342522 : 3343221 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_203 3349553 : 3354976 2 Yellowstone_lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_204 3362720 : 3365474 5 Microcystis_phage(50.0%) NA NA
DBSCAN-SWA_205 3373369 : 3379030 4 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_206 3384500 : 3385649 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_207 3390055 : 3392872 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_208 3399913 : 3408967 9 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_209 3417228 : 3536234 144 Shigella_phage(27.27%) head,plate,holin,protease,integrase,lysis,transposase,tRNA,tail,terminase,capsid attL 3411614:3411637|attR 3539357:3539380
DBSCAN-SWA_210 3544424 : 3545704 2 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_211 3548931 : 3554296 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_212 3571302 : 3572516 1 Escherichia_phage(100.0%) transposase NA
DBSCAN-SWA_213 3575529 : 3576486 1 Sodalis_phage(100.0%) transposase NA
DBSCAN-SWA_214 3583987 : 3584542 1 Clostridioides_phage(100.0%) NA NA
DBSCAN-SWA_215 3591109 : 3592570 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_216 3597922 : 3599135 1 Escherichia_phage(100.0%) transposase NA
DBSCAN-SWA_217 3604157 : 3605834 2 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_218 3609196 : 3610177 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_219 3631018 : 3642371 8 Enterobacteria_phage(20.0%) integrase,tRNA attL 3614993:3615007|attR 3637114:3637128
DBSCAN-SWA_220 3650649 : 3656746 6 Paramecium_bursaria_Chlorella_virus(66.67%) NA NA
DBSCAN-SWA_221 3660384 : 3663146 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_222 3667461 : 3673940 6 Klosneuvirus(33.33%) NA NA
DBSCAN-SWA_223 3695941 : 3759799 59 Morganella_phage(12.5%) protease,integrase,tRNA,transposase attL 3692546:3692575|attR 3718037:3718066
DBSCAN-SWA_224 3771367 : 3771982 1 Helicobacter_phage(100.0%) transposase NA
DBSCAN-SWA_225 3776007 : 3776997 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_226 3790118 : 3791331 1 Escherichia_phage(100.0%) transposase NA
DBSCAN-SWA_227 3813316 : 3814819 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_228 3819659 : 3820448 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_229 3826052 : 3827602 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_230 3831587 : 3833573 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_231 3838818 : 3840966 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_232 3850248 : 3852207 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_233 3857792 : 3859142 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_234 3862959 : 3866572 2 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_235 3870779 : 3921159 52 Stx2-converting_phage(32.61%) head,holin,transposase,tRNA,tail,terminase,capsid NA
DBSCAN-SWA_236 3925350 : 3925959 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_237 3935174 : 3936290 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_238 3952295 : 3953087 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_239 3964971 : 3968655 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_240 3984028 : 3985618 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_241 3990986 : 3992750 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_242 4001964 : 4010293 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_243 4014409 : 4017462 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_244 4025969 : 4027814 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_245 4044849 : 4052096 5 Serratia_phage(33.33%) NA NA
DBSCAN-SWA_246 4065087 : 4069272 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_247 4074909 : 4079412 5 Erwinia_phage(50.0%) NA NA
DBSCAN-SWA_248 4090985 : 4095846 5 Feldmannia_irregularis_virus(33.33%) NA NA
DBSCAN-SWA_249 4111669 : 4114720 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_250 4123594 : 4126374 3 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_251 4142741 : 4145212 2 Ectocarpus_siliculosus_virus(50.0%) NA NA
DBSCAN-SWA_252 4149290 : 4152077 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_253 4165756 : 4166371 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_254 4175161 : 4178448 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_255 4190860 : 4192690 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_256 4200172 : 4204031 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_257 4207067 : 4209868 2 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_258 4226177 : 4232321 6 Enterobacteria_phage(40.0%) NA NA
DBSCAN-SWA_259 4236363 : 4241775 4 Indivirus(33.33%) NA NA
DBSCAN-SWA_260 4250248 : 4251895 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_261 4265288 : 4271141 5 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_262 4274309 : 4275302 1 Heterosigma_akashiwo_virus(100.0%) NA NA
DBSCAN-SWA_263 4289081 : 4292443 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_264 4297972 : 4301813 4 Cyanophage(50.0%) NA NA
DBSCAN-SWA_265 4312799 : 4314137 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_266 4324335 : 4331704 8 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_267 4336411 : 4337560 1 Oenococcus_phage(100.0%) NA NA
DBSCAN-SWA_268 4341986 : 4342940 2 Cyanophage(50.0%) NA NA
DBSCAN-SWA_269 4349293 : 4358455 10 Aeromonas_phage(25.0%) NA NA
DBSCAN-SWA_270 4365593 : 4366928 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_271 4379045 : 4380437 1 environmental_Halophage(100.0%) NA NA
DBSCAN-SWA_272 4385558 : 4392309 6 Bordetella_phage(25.0%) NA NA
DBSCAN-SWA_273 4395682 : 4400246 6 Xanthomonas_phage(33.33%) NA NA
DBSCAN-SWA_274 4412177 : 4422918 10 Synechococcus_phage(16.67%) NA NA
DBSCAN-SWA_275 4445062 : 4455221 6 uncultured_Caudovirales_phage(66.67%) tRNA NA
DBSCAN-SWA_276 4479400 : 4480942 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_277 4486260 : 4487256 1 Escherichia_coli_O157_typing_phage(100.0%) NA NA
DBSCAN-SWA_278 4491480 : 4491693 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_279 4495347 : 4497681 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_280 4513599 : 4515584 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_281 4562081 : 4562729 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_282 4565963 : 4571055 6 uncultured_Caudovirales_phage(75.0%) transposase NA
DBSCAN-SWA_283 4574169 : 4576212 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_284 4589817 : 4592553 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_285 4595928 : 4601580 3 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_286 4609473 : 4613605 4 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_287 4616611 : 4619430 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_288 4625163 : 4626646 2 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_289 4630187 : 4631998 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_290 4652007 : 4654455 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_291 4663684 : 4664911 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_292 4669290 : 4671684 1 Iris_mild_mosaic_virus(100.0%) NA NA
DBSCAN-SWA_293 4677653 : 4678532 1 Sodalis_phage(100.0%) NA NA
DBSCAN-SWA_294 4685095 : 4688862 3 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_295 4705835 : 4706672 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_296 4730899 : 4740440 9 Acinetobacter_phage(25.0%) NA NA
DBSCAN-SWA_297 4745973 : 4751547 7 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_298 4771424 : 4772896 2 Prochlorococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_299 4783377 : 4787531 4 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_300 4794035 : 4794920 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_301 4800257 : 4804771 4 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_302 4814813 : 4815857 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_303 4832353 : 4834878 2 uncultured_archaeal_virus(50.0%) protease NA
DBSCAN-SWA_304 4838844 : 4839342 1 Pseudomonas_phage(100.0%) protease NA
DBSCAN-SWA_305 4843047 : 4844538 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_306 4854464 : 4869259 17 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_307 4873327 : 4874804 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_308 4881432 : 4884305 2 Micromonas_pusilla_virus(50.0%) protease NA
DBSCAN-SWA_309 4887824 : 4896324 5 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_310 4901805 : 4903695 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_311 4909522 : 4917315 10 Diadromus_pulchellus_ascovirus(25.0%) NA NA
DBSCAN-SWA_312 4940324 : 4941470 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_313 4949457 : 4951752 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_314 4977768 : 4978734 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_315 4991155 : 5007340 12 Herpes_simplex_virus(16.67%) tRNA NA
DBSCAN-SWA_316 5013716 : 5014955 1 Sinorhizobium_phage(100.0%) tRNA NA
DBSCAN-SWA_317 5020092 : 5021526 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_318 5031040 : 5042002 12 Staphylococcus_phage(20.0%) NA NA
DBSCAN-SWA_319 5045829 : 5056652 9 Stx_converting_phage(25.0%) NA NA
DBSCAN-SWA_320 5062728 : 5063613 1 Diadromus_pulchellus_ascovirus(100.0%) NA NA
DBSCAN-SWA_321 5085828 : 5087001 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_322 5119407 : 5123869 4 Shigella_phage(50.0%) transposase NA
DBSCAN-SWA_323 5133153 : 5134692 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_324 5157381 : 5158543 1 Acinetobacter_phage(100.0%) transposase NA
DBSCAN-SWA_325 5168084 : 5171001 2 Escherichia_phage(50.0%) integrase,transposase attL 5160470:5160485|attR 5177548:5177563
DBSCAN-SWA_326 5196834 : 5197989 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_327 5218990 : 5219668 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_328 5237676 : 5238909 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_329 5247438 : 5252806 3 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_330 5256730 : 5272122 14 Brevibacillus_phage(14.29%) tRNA NA
DBSCAN-SWA_331 5296401 : 5297157 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_332 5319996 : 5322491 2 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_333 5332122 : 5338895 6 Moraxella_phage(33.33%) NA NA
DBSCAN-SWA_334 5344372 : 5355500 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_335 5359358 : 5363539 4 Tetraselmis_virus(33.33%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP027309
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 9897 : 92362 99 Escherichia_phage(92.55%) transposase,tRNA,head,plate,tail,terminase,portal,protease,holin,integrase attL 11811:11829|attR 39565:39583
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage