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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP027325 Escherichia coli strain 2013C-4830 chromosome, complete genome 7 crisprs cas3,csa3,DEDDh,WYL,DinG,c2c9_V-U4,cas2,cas6e,cas5,cas7,cse2gr11 0 3 320 0
NZ_CP027327 Escherichia coli strain 2013C-4830 plasmid unnamed2, complete sequence 0 crisprs DEDDh 0 0 0 0
NZ_CP027326 Escherichia coli strain 2013C-4830 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 6 0

Results visualization

1. NZ_CP027325
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027325_1 398233-398353 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027325_2 1693004-1693116 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027325_3 1951310-1951425 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027325_4 2820980-2821128 Orphan I-F
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027325_5 3041918-3042009 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027325_6 5089278-5089368 TypeI-E I-E
1 spacers
cas2,cas6e,cas5,cas7,cse2gr11

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027325_7 5114497-5114580 Orphan I-E
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP027325_3 3.1|1951341|54|NZ_CP027325|CRISPRCasFinder 1951341-1951394 54 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 165411-165464 1 0.981
NZ_CP027325_5 5.1|3041944|40|NZ_CP027325|CRISPRCasFinder 3041944-3041983 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP027325_2 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder 1693032-1693088 57 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 15004-15060 11 0.807
NZ_CP027325_3 3.1|1951341|54|NZ_CP027325|CRISPRCasFinder 1951341-1951394 54 NZ_CP048385 Citrobacter freundii strain 62 plasmid p6_C, complete sequence 72431-72484 12 0.778
NZ_CP027325_2 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder 1693032-1693088 57 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12104-12160 13 0.772
NZ_CP027325_2 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder 1693032-1693088 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3364-3420 16 0.719
NZ_CP027325_2 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder 1693032-1693088 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3363-3419 16 0.719
NZ_CP027325_2 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder 1693032-1693088 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3363-3419 16 0.719
NZ_CP027325_2 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder 1693032-1693088 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3363-3419 16 0.719

1. spacer 3.1|1951341|54|NZ_CP027325|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.981

gaatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	CRISPR spacer
caatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	Protospacer
 *****************************************************

2. spacer 5.1|3041944|40|NZ_CP027325|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

acagcacagcggggggaatttcaagaatgacccgcagcgc	CRISPR spacer
acagcacagcgggggtaatttcaagaatgacccgcagcgc	Protospacer
*************** ************************

3. spacer 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.807

-acaataacagcattgcctgatgcgacgctcgcgcgtcttatcaggcctacgagttca	CRISPR spacer
aacaattacca-ggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccg	Protospacer
 ***** ** . . **************** ************* *********..*.

4. spacer 3.1|1951341|54|NZ_CP027325|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 12, identity: 0.778

gaatgccggatgcgctttgcttatccggcctacaaaatcgc-----agcgtgtaggcca	CRISPR spacer
tactgccggatgcgctttgcttatccggcctacaataccgcgaattaatttgta-----	Protospacer
 * ******************************** *.***     *.. ****     

5. spacer 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.772

-----acaataacagcattgcctgatgcgacgctcgcgcgtcttatcaggcctacgagtt	CRISPR spacer
ctccgacgtt-----cggtgcctgatgcgacgctggcgcgtcttatcaggcctacgagtc	Protospacer
     **. *     *. **************** ************************.

6. spacer 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 16, identity: 0.719

acaataacagcat-----tgcctgatgcgacgctcgcgcgtcttatcaggcctacgagtt	CRISPR spacer
-----agttgtacgcaggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcc	Protospacer
     *.. *.*.     **************** ************* *********..

7. spacer 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 16, identity: 0.719

acaataacagcat-----tgcctgatgcgacgctcgcgcgtcttatcaggcctacgagtt	CRISPR spacer
-----agttgtacgcaggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcc	Protospacer
     *.. *.*.     **************** ************* *********..

8. spacer 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 16, identity: 0.719

acaataacagcat-----tgcctgatgcgacgctcgcgcgtcttatcaggcctacgagtt	CRISPR spacer
-----agttgtacgcaggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcc	Protospacer
     *.. *.*.     **************** ************* *********..

9. spacer 2.1|1693032|57|NZ_CP027325|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 16, identity: 0.719

acaataacagcat-----tgcctgatgcgacgctcgcgcgtcttatcaggcctacgagtt	CRISPR spacer
-----agttgtacgcaggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcc	Protospacer
     *.. *.*.     **************** ************* *********..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 6309 4 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_2 17835 : 26689 7 environmental_halophage(25.0%) tRNA NA
DBSCAN-SWA_3 30222 : 33111 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_4 38588 : 45360 5 Geobacillus_virus(33.33%) NA NA
DBSCAN-SWA_5 54991 : 57486 2 Aichi_virus(50.0%) NA NA
DBSCAN-SWA_6 64932 : 68734 4 Shigella_phage(50.0%) transposase NA
DBSCAN-SWA_7 93216 : 108607 14 environmental_Halophage(14.29%) tRNA NA
DBSCAN-SWA_8 115029 : 117903 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_9 126430 : 127663 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_10 145668 : 146346 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_11 158984 : 160139 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_12 187225 : 190443 2 Shigella_phage(50.0%) transposase NA
DBSCAN-SWA_13 213848 : 215387 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_14 226159 : 236941 5 Stx2-converting_phage(25.0%) protease,transposase NA
DBSCAN-SWA_15 287073 : 287958 1 Diadromus_pulchellus_ascovirus(100.0%) NA NA
DBSCAN-SWA_16 294033 : 304855 8 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_17 309812 : 324822 15 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_18 331624 : 333058 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_19 338195 : 339434 1 Sinorhizobium_phage(100.0%) tRNA NA
DBSCAN-SWA_20 345816 : 362000 12 Moraxella_phage(16.67%) tRNA NA
DBSCAN-SWA_21 374645 : 375611 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_22 403156 : 405451 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_23 413426 : 414572 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_24 437581 : 445374 10 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_25 451201 : 453091 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_26 458572 : 465211 4 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_27 468412 : 471285 2 Pandoravirus(50.0%) protease NA
DBSCAN-SWA_28 477912 : 479389 2 Indivirus(50.0%) NA NA
DBSCAN-SWA_29 483457 : 498252 17 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_30 505497 : 572221 59 uncultured_Mediterranean_phage(16.67%) tRNA,protease,transposase NA
DBSCAN-SWA_31 593592 : 595095 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_32 599917 : 600706 1 Cedratvirus(100.0%) NA NA
DBSCAN-SWA_33 606309 : 607925 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_34 611910 : 613896 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_35 619141 : 621289 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_36 630685 : 632644 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_37 638227 : 639577 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_38 643394 : 647007 2 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_39 651196 : 695502 49 Stx2-converting_phage(42.86%) tRNA,terminase,integrase,tail,holin,head,capsid,transposase attL 654460:654476|attR 688236:688252
DBSCAN-SWA_40 699447 : 700056 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_41 709178 : 710294 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_42 735757 : 739441 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_43 755521 : 757111 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_44 762478 : 764242 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_45 773605 : 781934 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_46 786053 : 789106 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_47 797609 : 799454 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_48 820617 : 823792 3 Hokovirus(50.0%) NA NA
DBSCAN-SWA_49 836659 : 838801 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_50 844438 : 848956 5 Erwinia_phage(50.0%) NA NA
DBSCAN-SWA_51 860531 : 865390 4 Feldmannia_irregularis_virus(33.33%) NA NA
DBSCAN-SWA_52 880148 : 883199 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_53 890519 : 893299 3 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_54 909523 : 911994 2 Ectocarpus_siliculosus_virus(50.0%) NA NA
DBSCAN-SWA_55 916072 : 918859 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_56 932453 : 933068 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_57 941858 : 945145 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_58 957557 : 959387 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_59 966863 : 970722 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_60 989163 : 995307 6 Enterobacteria_phage(40.0%) NA NA
DBSCAN-SWA_61 999349 : 999679 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_62 1002732 : 1004754 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_63 1013226 : 1014873 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_64 1018413 : 1019626 1 Enterobacteria_phage(100.0%) transposase NA
DBSCAN-SWA_65 1029668 : 1035520 5 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_66 1038688 : 1039681 1 Heterosigma_akashiwo_virus(100.0%) NA NA
DBSCAN-SWA_67 1051633 : 1054995 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_68 1060525 : 1064365 4 Cyanophage(50.0%) NA NA
DBSCAN-SWA_69 1069806 : 1073699 3 Shigella_phage(50.0%) transposase NA
DBSCAN-SWA_70 1083896 : 1091265 8 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_71 1095970 : 1097119 1 Oenococcus_phage(100.0%) NA NA
DBSCAN-SWA_72 1101546 : 1102500 2 Cyanophage(50.0%) NA NA
DBSCAN-SWA_73 1108845 : 1118006 10 Aeromonas_phage(25.0%) NA NA
DBSCAN-SWA_74 1125311 : 1126646 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_75 1136083 : 1138962 5 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_76 1142045 : 1143215 1 Enterobacteria_phage(100.0%) integrase attL 1133337:1133350|attR 1148007:1148020
DBSCAN-SWA_77 1149377 : 1150769 1 environmental_Halophage(100.0%) NA NA
DBSCAN-SWA_78 1155890 : 1162641 5 Bordetella_phage(33.33%) NA NA
DBSCAN-SWA_79 1166014 : 1170577 7 Xanthomonas_phage(25.0%) NA NA
DBSCAN-SWA_80 1182508 : 1193237 10 Synechococcus_phage(16.67%) NA NA
DBSCAN-SWA_81 1215303 : 1216077 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_82 1221741 : 1223586 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_83 1247771 : 1249313 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_84 1254627 : 1255623 1 Escherichia_coli_O157_typing_phage(100.0%) NA NA
DBSCAN-SWA_85 1259847 : 1260060 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_86 1263714 : 1266048 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_87 1276262 : 1278247 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_88 1325152 : 1325800 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_89 1330682 : 1332817 3 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_90 1336162 : 1338205 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_91 1351617 : 1357514 6 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_92 1365406 : 1369538 4 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_93 1372541 : 1375360 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_94 1381094 : 1382577 2 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_95 1386118 : 1387929 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_96 1407956 : 1410404 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_97 1419626 : 1420853 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_98 1425232 : 1427626 1 Iris_mild_mosaic_virus(100.0%) NA NA
DBSCAN-SWA_99 1433595 : 1434474 1 Sodalis_phage(100.0%) NA NA
DBSCAN-SWA_100 1441036 : 1444803 3 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_101 1461714 : 1462551 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_102 1486769 : 1496309 9 Acinetobacter_phage(25.0%) NA NA
DBSCAN-SWA_103 1501867 : 1507441 7 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_104 1527318 : 1528790 2 Prochlorococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_105 1539124 : 1616770 59 Vibrio_phage(12.5%) tRNA,protease,transposase NA
DBSCAN-SWA_106 1658017 : 1664505 6 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_107 1668742 : 1671503 2 Cronobacter_phage(50.0%) NA NA
DBSCAN-SWA_108 1675141 : 1681238 6 Paramecium_bursaria_Chlorella_virus(66.67%) NA NA
DBSCAN-SWA_109 1689596 : 1694653 3 Klosneuvirus(50.0%) tRNA NA
DBSCAN-SWA_110 1701590 : 1707924 5 Enterobacteria_phage(33.33%) integrase,transposase attL 1692174:1692187|attR 1708635:1708648
DBSCAN-SWA_111 1711427 : 1716441 4 Serratia_phage(50.0%) transposase NA
DBSCAN-SWA_112 1722569 : 1723862 2 Yersinia_phage(50.0%) NA NA
DBSCAN-SWA_113 1728733 : 1729714 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_114 1733075 : 1734752 2 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_115 1745018 : 1746479 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_116 1753001 : 1753556 1 Clostridioides_phage(100.0%) NA NA
DBSCAN-SWA_117 1761061 : 1762018 1 Sodalis_phage(100.0%) transposase NA
DBSCAN-SWA_118 1782077 : 1787441 3 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_119 1790667 : 1791947 2 Shigella_phage(50.0%) NA NA
DBSCAN-SWA_120 1800136 : 1884121 98 Stx2-converting_phage(42.86%) tRNA,head,terminase,integrase,tail,holin,protease,capsid attL 1792763:1792778|attR 1862979:1862994
DBSCAN-SWA_121 1892375 : 1901434 9 Cyanophage(20.0%) NA NA
DBSCAN-SWA_122 1908475 : 1911292 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_123 1915735 : 1916884 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_124 1922354 : 1928015 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_125 1935909 : 1937309 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_126 1945053 : 1950475 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_127 1956794 : 1957493 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_128 1970194 : 1971919 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_129 1997897 : 1998941 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_130 2003186 : 2003738 1 Sphingobium_phage(100.0%) NA NA
DBSCAN-SWA_131 2012365 : 2013790 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_132 2021438 : 2028061 5 Mamastrovirus(33.33%) NA NA
DBSCAN-SWA_133 2031323 : 2032220 1 Sodalis_phage(100.0%) NA NA
DBSCAN-SWA_134 2036301 : 2037575 1 Shigella_phage(100.0%) transposase NA
DBSCAN-SWA_135 2043668 : 2050474 6 unidentified_phage(50.0%) tRNA NA
DBSCAN-SWA_136 2055717 : 2056515 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_137 2062426 : 2062771 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_138 2066700 : 2068125 1 uncultured_Mediterranean_phage(100.0%) protease NA
DBSCAN-SWA_139 2080009 : 2080768 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_140 2089596 : 2093712 2 Emiliania_huxleyi_virus(50.0%) NA NA
DBSCAN-SWA_141 2106669 : 2107701 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_142 2117652 : 2121854 5 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_143 2131021 : 2202487 60 Shigella_phage(14.29%) holin,transposase NA
DBSCAN-SWA_144 2209613 : 2211500 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_145 2214589 : 2215489 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_146 2220028 : 2224308 2 Herpes_simplex_virus(50.0%) NA NA
DBSCAN-SWA_147 2229718 : 2231679 2 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_148 2234869 : 2235979 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_149 2241291 : 2242059 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_150 2245463 : 2246626 1 Acinetobacter_phage(100.0%) transposase NA
DBSCAN-SWA_151 2250261 : 2251419 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_152 2258834 : 2259950 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_153 2264239 : 2274211 7 Bacillus_phage(60.0%) NA NA
DBSCAN-SWA_154 2281163 : 2290144 10 uncultured_Mediterranean_phage(60.0%) tRNA NA
DBSCAN-SWA_155 2313850 : 2318897 4 Agrobacterium_phage(25.0%) protease NA
DBSCAN-SWA_156 2322025 : 2322721 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_157 2326044 : 2329591 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_158 2338427 : 2341577 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_159 2348585 : 2357043 8 Klosneuvirus(25.0%) NA NA
DBSCAN-SWA_160 2365287 : 2368348 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_161 2372887 : 2373565 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_162 2376701 : 2377388 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_163 2389693 : 2391475 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_164 2397625 : 2398771 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_165 2410288 : 2450557 44 Escherichia_phage(41.67%) tRNA,protease,tail,transposase NA
DBSCAN-SWA_166 2465547 : 2470307 3 Ralstonia_phage(33.33%) NA NA
DBSCAN-SWA_167 2473452 : 2476596 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_168 2488038 : 2494080 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_169 2509307 : 2510528 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_170 2513638 : 2515753 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_171 2531178 : 2531825 2 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_172 2536640 : 2539091 2 Stx2-converting_phage(50.0%) NA NA
DBSCAN-SWA_173 2546101 : 2548684 1 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_174 2554867 : 2558400 3 Bathycoccus_sp._RCC1105_virus(50.0%) NA NA
DBSCAN-SWA_175 2566296 : 2567376 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_176 2571471 : 2573136 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_177 2577903 : 2581717 2 Vibrio_phage(50.0%) tRNA NA
DBSCAN-SWA_178 2593283 : 2609494 12 Hokovirus(33.33%) NA NA
DBSCAN-SWA_179 2612872 : 2613664 1 Kaumoebavirus(100.0%) NA NA
DBSCAN-SWA_180 2649511 : 2653031 4 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_181 2657386 : 2663959 7 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_182 2673669 : 2689618 14 Enterobacteria_phage(55.56%) integrase,tail,holin,protease,transposase attL 2673582:2673596|attR 2687689:2687703
DBSCAN-SWA_183 2696099 : 2697008 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_184 2707606 : 2722416 12 Anomala_cuprea_entomopoxvirus(14.29%) NA NA
DBSCAN-SWA_185 2725956 : 2731181 7 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_186 2736177 : 2744519 5 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_187 2747734 : 2749606 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_188 2760941 : 2762144 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_189 2770710 : 2779860 11 Vibrio_phage(25.0%) NA NA
DBSCAN-SWA_190 2783196 : 2785934 4 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_191 2789521 : 2791240 1 Yellowstone_lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_192 2800537 : 2882532 80 Escherichia_phage(35.59%) tRNA,lysis,terminase,portal,integrase,protease,tail,holin,plate,head,capsid,transposase attL 2786811:2786829|attR 2888625:2888643
DBSCAN-SWA_193 2886630 : 2887719 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_194 2892805 : 2897346 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_195 2912051 : 2923184 8 Rhodobacter_phage(20.0%) tRNA NA
DBSCAN-SWA_196 2939105 : 2941013 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_197 2945680 : 3010979 77 Enterobacteria_phage(36.96%) head,terminase,portal,integrase,tail,holin,protease,capsid attL 2960762:2960821|attR 3006242:3006306
DBSCAN-SWA_198 3025304 : 3037560 12 Morganella_phage(20.0%) NA NA
DBSCAN-SWA_199 3041866 : 3043744 3 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_200 3058507 : 3059572 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_201 3064462 : 3065625 1 Acinetobacter_phage(100.0%) transposase NA
DBSCAN-SWA_202 3069015 : 3069849 1 Pelagibacter_phage(100.0%) NA NA
DBSCAN-SWA_203 3073982 : 3074516 1 Red_sea_bream_iridovirus(100.0%) NA NA
DBSCAN-SWA_204 3084022 : 3085578 2 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_205 3091137 : 3092058 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_206 3096719 : 3096965 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_207 3112815 : 3113757 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_208 3126111 : 3127293 2 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_209 3130565 : 3132208 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_210 3144538 : 3144796 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_211 3152085 : 3240631 99 Enterobacteria_phage(35.62%) tRNA,terminase,portal,integrase,tail,holin,protease,transposase attL 3186246:3186262|attR 3240265:3240281
DBSCAN-SWA_212 3247262 : 3248950 2 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_213 3271724 : 3397792 117 Escherichia_phage(25.0%) tRNA,portal,integrase,tail,protease,holin,head,transposase attL 3323066:3323125|attR 3374818:3376128
DBSCAN-SWA_214 3402716 : 3403307 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_215 3411122 : 3506281 100 Escherichia_phage(61.19%) lysis,integrase,tail,holin,transposase attL 3416098:3416114|attR 3494854:3494870
DBSCAN-SWA_216 3521579 : 3528515 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_217 3533793 : 3537600 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_218 3541917 : 3543823 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_219 3548261 : 3548546 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_220 3554558 : 3554849 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_221 3561661 : 3563206 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_222 3569518 : 3573736 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_223 3578594 : 3580703 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_224 3585609 : 3587712 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_225 3591977 : 3592787 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_226 3596168 : 3600713 5 Mycoplasma_phage(33.33%) NA NA
DBSCAN-SWA_227 3605133 : 3715867 107 Escherichia_phage(39.06%) tRNA,terminase,portal,integrase,tail,holin,protease,transposase attL 3661768:3661793|attR 3707121:3707146
DBSCAN-SWA_228 3728938 : 3795344 52 Escherichia_phage(34.78%) protease,integrase,holin,transposase attL 3787388:3787403|attR 3798887:3798902
DBSCAN-SWA_229 3813105 : 3814407 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_230 3824302 : 3826114 1 Vaccinia_virus(100.0%) NA NA
DBSCAN-SWA_231 3845995 : 3847270 1 Cronobacter_phage(100.0%) tRNA NA
DBSCAN-SWA_232 3854181 : 3856644 2 Salmonella_phage(50.0%) transposase NA
DBSCAN-SWA_233 3865813 : 3874604 9 Streptomyces_phage(20.0%) NA NA
DBSCAN-SWA_234 3880108 : 3882375 3 Edwardsiella_phage(50.0%) NA NA
DBSCAN-SWA_235 3890673 : 3895757 5 environmental_halophage(33.33%) NA NA
DBSCAN-SWA_236 3919606 : 3933741 16 Tupanvirus(28.57%) tRNA NA
DBSCAN-SWA_237 3942424 : 3944686 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_238 3951029 : 3951857 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_239 3959333 : 3960554 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_240 3967309 : 3967963 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_241 3973562 : 3975524 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_242 3980450 : 3984536 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_243 3993336 : 3994191 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_244 3997509 : 4002086 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_245 4016836 : 4024941 7 Staphylococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_246 4028801 : 4030352 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_247 4035992 : 4036202 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_248 4041519 : 4043568 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_249 4051063 : 4055533 7 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_250 4063589 : 4065065 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_251 4069064 : 4076131 9 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_252 4080149 : 4085246 4 Escherichia_coli_phage(33.33%) NA NA
DBSCAN-SWA_253 4092736 : 4168481 84 Enterobacteria_phage(69.39%) tRNA,terminase,portal,integrase,tail,holin,plate,head,capsid,transposase attL 4129357:4129416|attR 4169420:4169543
DBSCAN-SWA_254 4174733 : 4175486 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_255 4187148 : 4187817 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_256 4201831 : 4281872 56 Enterobacteria_phage(33.33%) lysis,terminase,integrase,tail,holin,head,capsid,transposase attL 4209158:4209174|attR 4286714:4286730
DBSCAN-SWA_257 4296728 : 4297538 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_258 4315031 : 4316198 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_259 4323842 : 4324742 1 Cellulophaga_phage(100.0%) NA NA
DBSCAN-SWA_260 4332096 : 4333263 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_261 4341921 : 4343325 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_262 4351612 : 4357304 5 uncultured_Mediterranean_phage(20.0%) NA NA
DBSCAN-SWA_263 4363096 : 4369890 6 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_264 4374133 : 4384786 8 uncultured_marine_virus(20.0%) NA NA
DBSCAN-SWA_265 4389449 : 4390802 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_266 4404651 : 4411535 7 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_267 4415430 : 4416704 1 Shigella_phage(100.0%) transposase NA
DBSCAN-SWA_268 4422086 : 4425643 4 Serratia_phage(50.0%) NA NA
DBSCAN-SWA_269 4436288 : 4438322 1 Indivirus(100.0%) tRNA NA
DBSCAN-SWA_270 4449955 : 4463339 12 Enterobacteria_phage(63.64%) tail,transposase NA
DBSCAN-SWA_271 4467036 : 4473440 9 Enterobacteria_phage(28.57%) NA NA
DBSCAN-SWA_272 4493774 : 4495295 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_273 4498989 : 4499658 1 Cellulophaga_phage(100.0%) NA NA
DBSCAN-SWA_274 4511072 : 4511930 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_275 4526357 : 4530658 4 Ostreococcus_tauri_virus(50.0%) NA NA
DBSCAN-SWA_276 4536412 : 4544060 7 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_277 4557083 : 4557701 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_278 4566468 : 4572246 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_279 4576409 : 4579259 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_280 4588957 : 4591585 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_281 4597000 : 4602979 5 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_282 4608872 : 4613188 4 Sodalis_phage(50.0%) transposase NA
DBSCAN-SWA_283 4616791 : 4621794 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_284 4656215 : 4659443 3 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_285 4670002 : 4671863 2 Sodalis_phage(50.0%) NA NA
DBSCAN-SWA_286 4676074 : 4677592 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_287 4684068 : 4685205 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_288 4693761 : 4694847 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_289 4712930 : 4713863 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_290 4717254 : 4718688 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_291 4725328 : 4732905 4 Hokovirus(50.0%) NA NA
DBSCAN-SWA_292 4736596 : 4739420 4 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_293 4742648 : 4743383 1 Clostridioides_phage(100.0%) NA NA
DBSCAN-SWA_294 4764908 : 4776602 11 Streptococcus_phage(40.0%) NA NA
DBSCAN-SWA_295 4783745 : 4788683 6 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_296 4807435 : 4808386 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_297 4826413 : 4827127 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_298 4848367 : 4852368 4 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_299 4858802 : 4866425 6 Escherichia_phage(60.0%) NA NA
DBSCAN-SWA_300 4875254 : 4875686 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_301 4885571 : 4892028 8 Mycoplasma_phage(20.0%) NA NA
DBSCAN-SWA_302 4914589 : 4925897 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_303 4930016 : 4930277 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_304 4933736 : 4937478 3 Tetraselmis_virus(50.0%) NA NA
DBSCAN-SWA_305 4943269 : 4949528 7 Cafeteria_roenbergensis_virus(25.0%) tRNA NA
DBSCAN-SWA_306 4954821 : 4956120 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_307 4961893 : 4964467 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_308 4970374 : 4971445 1 Escherichia_coli_O157_typing_phage(100.0%) NA NA
DBSCAN-SWA_309 4985079 : 4985562 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_310 5000709 : 5004834 4 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_311 5008769 : 5014065 5 Oenococcus_phage(20.0%) NA NA
DBSCAN-SWA_312 5027116 : 5032676 5 Vibrio_phage(25.0%) tRNA NA
DBSCAN-SWA_313 5038142 : 5039108 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_314 5046583 : 5047597 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_315 5065782 : 5072921 4 Escherichia_phage(75.0%) NA NA
DBSCAN-SWA_316 5078136 : 5081852 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_317 5084964 : 5086997 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_318 5110561 : 5111347 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_319 5114921 : 5119840 3 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_320 5123872 : 5127987 2 Erysipelothrix_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP027326
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 5531 3 Acinetobacter_phage(66.67%) transposase NA
DBSCAN-SWA_2 8992 : 11113 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_3 31950 : 37704 4 Acinetobacter_phage(25.0%) transposase,integrase attL 28649:28663|attR 46259:46273
DBSCAN-SWA_4 44529 : 51199 6 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_5 59781 : 63161 5 Xanthomonas_phage(33.33%) NA NA
DBSCAN-SWA_6 69213 : 70782 2 Acinetobacter_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage