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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP027453 Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP027452 Escherichia coli strain 2014C-3338 chromosome, complete genome 6 crisprs DinG,DEDDh,WYL,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2 0 16 10 0

Results visualization

1. NZ_CP027452
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027452_1 173657-173748 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027452_2 675976-676088 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027452_3 3132313-3132768 Unclear I-E
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027452_4 3158469-3159534 TypeI-E I-E
17 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027452_5 3743686-3743781 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027452_6 4222868-4222991 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP027452_2 2.1|675999|24|NZ_CP027452|PILER-CR 675999-676022 24 NC_049946 Escherichia virus Lambda_4A7 genome assembly, chromosome: 1 37652-37675 0 1.0
NZ_CP027452_2 2.1|675999|24|NZ_CP027452|PILER-CR 675999-676022 24 LR595861 Escherichia virus Lambda_4C10 genome assembly, chromosome: 1 37935-37958 0 1.0
NZ_CP027452_2 2.2|676046|25|NZ_CP027452|PILER-CR 676046-676070 25 NC_049946 Escherichia virus Lambda_4A7 genome assembly, chromosome: 1 37604-37628 0 1.0
NZ_CP027452_2 2.2|676046|25|NZ_CP027452|PILER-CR 676046-676070 25 LR595861 Escherichia virus Lambda_4C10 genome assembly, chromosome: 1 37887-37911 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11835-11866 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42178 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36520-36551 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1588 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9506-9537 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94787 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65534-65565 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61947 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64165-64196 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20317 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119284-119315 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85099-85130 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46719 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42116-42147 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87237-87268 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81884 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70500-70531 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47892 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62997-63028 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 MH422554 Escherichia phage P1, complete genome 87194-87225 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NC_050152 Enterobacteria phage P7, complete genome 93995-94026 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58645-58676 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NC_031129 Salmonella phage SJ46, complete genome 77363-77394 0 1.0
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 MH445381 Escherichia virus P1, complete genome 56870-56901 0 1.0
NZ_CP027452_1 1.1|173683|40|NZ_CP027452|CRISPRCasFinder 173683-173722 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP027452_2 2.1|675999|24|NZ_CP027452|PILER-CR 675999-676022 24 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 44572-44595 1 0.958
NZ_CP027452_2 2.2|676046|25|NZ_CP027452|PILER-CR 676046-676070 25 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 44524-44548 1 0.96
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17440-17471 2 0.938
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122310-122341 2 0.938
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6029-6060 2 0.938
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15152 2 0.938
NZ_CP027452_4 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159474-3159505 32 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131402-131433 2 0.938
NZ_CP027452_6 6.1|4222911|38|NZ_CP027452|CRISPRCasFinder 4222911-4222948 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP027452_2 2.2|676046|25|NZ_CP027452|PILER-CR 676046-676070 25 NZ_CP015341 Lactobacillus brevis strain 100D8 plasmid unnamed3, complete sequence 35661-35685 4 0.84
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP022140 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence 27735-27766 6 0.812
NZ_CP027452_4 4.6|3158803|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158803-3158834 32 MN694288 Marine virus AFVG_250M340, complete genome 2144-2175 7 0.781
NZ_CP027452_4 4.6|3158803|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158803-3158834 32 MN694316 Marine virus AFVG_250M341, complete genome 38824-38855 7 0.781
NZ_CP027452_4 4.6|3158803|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158803-3158834 32 MN694631 Marine virus AFVG_250M342, complete genome 38482-38513 7 0.781
NZ_CP027452_3 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3132342-3132373 32 MK448716 Streptococcus phage Javan249, complete genome 37558-37589 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_LT904880 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3 100861-100892 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_LT904895 Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2 32455-32486 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP012254 Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence 90639-90670 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029647 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence 24048-24079 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_LT904853 Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2 2158-2189 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NC_003385 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence 69550-69581 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029859 Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence 33422-33453 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029847 Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence 64890-64921 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029916 Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence 3001-3032 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029893 Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence 30210-30241 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029876 Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence 21803-21834 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029884 Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence 5429-5460 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029961 Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence 76887-76918 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029849 Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence 9632-9663 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029857 Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence 17697-17728 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029929 Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence 73527-73558 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029865 Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence 87633-87664 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_LT883154 Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2 32810-32841 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029905 Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence 30728-30759 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029851 Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence 44207-44238 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP040567 Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence 17468-17499 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029889 Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence 17968-17999 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029891 Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence 18575-18606 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029898 Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence 21136-21167 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029951 Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence 47286-47317 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029867 Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence 33258-33289 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029901 Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence 32901-32932 8 0.75
NZ_CP027452_3 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT 3132525-3132556 32 NZ_CP029921 Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence 100446-100477 8 0.75
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 70246-70277 8 0.75
NZ_CP027452_4 4.9|3158986|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158986-3159017 32 MN961670 Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence 335269-335300 8 0.75
NZ_CP027452_4 4.11|3159108|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159108-3159139 32 NZ_CP024314 Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence 2299205-2299236 8 0.75
NZ_CP027452_3 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3132342-3132373 32 NZ_CP044347 Escherichia coli strain P225M plasmid pP225M-CTX-M-55, complete sequence 121862-121893 9 0.719
NZ_CP027452_3 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3132342-3132373 32 NZ_CP032533 Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence 17401-17432 9 0.719
NZ_CP027452_3 3.5|3132586|32|NZ_CP027452|CRISPRCasFinder,CRT,PILER-CR 3132586-3132617 32 AP014399 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C110A-MedDCM-OCT-S26-C20, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces 35411-35442 9 0.719
NZ_CP027452_3 3.5|3132586|32|NZ_CP027452|CRISPRCasFinder,CRT,PILER-CR 3132586-3132617 32 AP013383 Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C110A-MedDCM-OCT-S24-C13 29583-29614 9 0.719
NZ_CP027452_3 3.6|3132647|32|NZ_CP027452|CRISPRCasFinder,CRT,PILER-CR 3132647-3132678 32 NZ_CP021994 Cryobacterium sp. LW097 plasmid unnamed1 33387-33418 9 0.719
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP011404 Lactobacillus salivarius str. Ren plasmid pR1, complete sequence 100759-100790 9 0.719
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP020859 Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence 48192-48223 9 0.719
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP020859 Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence 248214-248245 9 0.719
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP017108 Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence 140326-140357 9 0.719
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP017110 Lactobacillus salivarius strain CICC23174 plasmid pLS_3, complete sequence 20889-20920 9 0.719
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP029460 Clostridium novyi strain 150557 plasmid pCN2, complete sequence 45232-45263 9 0.719
NZ_CP027452_4 4.6|3158803|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158803-3158834 32 MN694106 Marine virus AFVG_250M510, complete genome 37990-38021 9 0.719
NZ_CP027452_4 4.11|3159108|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159108-3159139 32 NZ_CP030830 Neorhizobium sp. NCHU2750 plasmid pNCHU2750c, complete sequence 129035-129066 9 0.719
NZ_CP027452_3 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3132342-3132373 32 NZ_CP045561 Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence 141094-141125 10 0.688
NZ_CP027452_3 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3132342-3132373 32 NZ_CP014478 Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence 140150-140181 10 0.688
NZ_CP027452_3 3.7|3132708|32|NZ_CP027452|CRISPRCasFinder,CRT,PILER-CR 3132708-3132739 32 NZ_CP024940 Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence 1163456-1163487 10 0.688
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NC_018511 Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence 60-91 10 0.688
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NC_001446 Bacillus thuringiensis sv israelensis HI4 plasmid pTX14-3, complete sequence 4548-4579 10 0.688
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP009345 Bacillus thuringiensis HD1002 plasmid 6, complete sequence 1165-1196 10 0.688
NZ_CP027452_4 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158498-3158529 32 NZ_CP053657 Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence 105460-105491 10 0.688
NZ_CP027452_4 4.7|3158864|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158864-3158895 32 NZ_CP031468 Paraburkholderia caffeinilytica strain CF1 plasmid p1, complete sequence 166221-166252 10 0.688
NZ_CP027452_4 4.7|3158864|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3158864-3158895 32 NZ_CP014580 Burkholderia sp. OLGA172 plasmid pOLGA1, complete sequence 2849-2880 10 0.688
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_CP041048 Citrobacter sp. CF971 plasmid pBM527-2, complete sequence 72272-72303 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 MN783744 Klebsiella oxytoca plasmid pFDL-VIM, complete sequence 83502-83533 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NC_012885 Aeromonas hydrophila plasmid pRA1, complete sequence 49841-49872 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_CP042536 Citrobacter freundii strain E51 plasmid pE51_002, complete sequence 47980-48011 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_CP042479 Citrobacter freundii strain C50 plasmid pC50_001, complete sequence 161018-161049 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_CP034714 Salmonella enterica subsp. enterica serovar Mikawasima strain RSE15 plasmid pRSE15, complete sequence 47375-47406 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_CP012168 Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-239.973kb, complete sequence 79240-79271 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 MN783743 Escherichia coli plasmid pGA_VIM, complete sequence 94759-94790 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_CP034084 Klebsiella pneumoniae subsp. pneumoniae strain R210-2 plasmid pR210-2-VIM, complete sequence 36593-36624 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_MH220284 Aeromonas sp. pRIVM0001_VIM-1 plasmid pRIVM0001_VIM-1_171012_B12, complete sequence 35490-35521 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_MG228427 Kluyvera cryocrescens strain BO64W plasmid pKC-BO-N1-VIM, complete sequence 35534-35565 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_MG550958 Escherichia coli strain G3216 plasmid pG3216.2, complete sequence 80224-80255 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_MH325469 Enterobacter hormaechei strain Ec13 plasmid pEc13, complete sequence 152450-152481 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_MH325468 Enterobacter hormaechei strain Ec09 plasmid pEc09, complete sequence 70132-70163 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_MH594478 Citrobacter freundii strain AA593 plasmid pIBAC_Incx3_A/C, complete sequence 60448-60479 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_MH594477 Citrobacter freundii strain AA535 plasmid pIBAC_IncA/C, complete sequence 61205-61236 11 0.656
NZ_CP027452_4 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT 3159352-3159383 32 NZ_MG053108 Citrobacter freundii strain 33587 plasmid pCf587, complete sequence 48598-48629 11 0.656

1. spacer 2.1|675999|24|NZ_CP027452|PILER-CR matches to NC_049946 (Escherichia virus Lambda_4A7 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0

cgcctttacctgatttgggtaaac	CRISPR spacer
cgcctttacctgatttgggtaaac	Protospacer
************************

2. spacer 2.1|675999|24|NZ_CP027452|PILER-CR matches to LR595861 (Escherichia virus Lambda_4C10 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0

cgcctttacctgatttgggtaaac	CRISPR spacer
cgcctttacctgatttgggtaaac	Protospacer
************************

3. spacer 2.2|676046|25|NZ_CP027452|PILER-CR matches to NC_049946 (Escherichia virus Lambda_4A7 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0

tttacctctttcaggtaaactttat	CRISPR spacer
tttacctctttcaggtaaactttat	Protospacer
*************************

4. spacer 2.2|676046|25|NZ_CP027452|PILER-CR matches to LR595861 (Escherichia virus Lambda_4C10 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0

tttacctctttcaggtaaactttat	CRISPR spacer
tttacctctttcaggtaaactttat	Protospacer
*************************

5. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

26. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

27. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

28. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

29. spacer 1.1|173683|40|NZ_CP027452|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

30. spacer 2.1|675999|24|NZ_CP027452|PILER-CR matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 1, identity: 0.958

cgcctttacctgatttgggtaaac	CRISPR spacer
tgcctttacctgatttgggtaaac	Protospacer
.***********************

31. spacer 2.2|676046|25|NZ_CP027452|PILER-CR matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 1, identity: 0.96

tttacctctttcaggtaaactttat	CRISPR spacer
tttacctctttaaggtaaactttat	Protospacer
*********** *************

32. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

33. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

34. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

35. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

36. spacer 4.17|3159474|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

37. spacer 6.1|4222911|38|NZ_CP027452|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

38. spacer 2.2|676046|25|NZ_CP027452|PILER-CR matches to NZ_CP015341 (Lactobacillus brevis strain 100D8 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.84

tttacctctttcaggtaaactttat	CRISPR spacer
ggtatctcattcaggtaaactttat	Protospacer
  **.*** ****************

39. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022140 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

cattgaa-aacattgcctttattttattttttg	CRISPR spacer
-attaaatcacattccctctattttattttttc	Protospacer
 ***.**  ***** ***.************* 

40. spacer 4.6|3158803|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN694288 (Marine virus AFVG_250M340, complete genome) position: , mismatch: 7, identity: 0.781

acaccccgctatctgcgcggctttacgagata-	CRISPR spacer
ataccctgcaatctgcgcggcttta-gcggcac	Protospacer
*.****.** *************** * *..* 

41. spacer 4.6|3158803|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN694316 (Marine virus AFVG_250M341, complete genome) position: , mismatch: 7, identity: 0.781

acaccccgctatctgcgcggctttacgagata-	CRISPR spacer
ataccctgcaatctgcgcggcttta-gcggcac	Protospacer
*.****.** *************** * *..* 

42. spacer 4.6|3158803|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN694631 (Marine virus AFVG_250M342, complete genome) position: , mismatch: 7, identity: 0.781

acaccccgctatctgcgcggctttacgagata-	CRISPR spacer
ataccctgcaatctgcgcggcttta-gcggcac	Protospacer
*.****.** *************** * *..* 

43. spacer 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MK448716 (Streptococcus phage Javan249, complete genome) position: , mismatch: 8, identity: 0.75

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
taataacaaaacgacagcaaaagattatagtt	Protospacer
  .*********.********* ***** * .

44. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

45. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

46. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP012254 (Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttatca	Protospacer
******** *****.********  **  .*.

47. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

48. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

49. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

50. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

51. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

52. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

53. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

54. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

55. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

56. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

57. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

58. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

59. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

60. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

61. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

62. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

63. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

64. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

65. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

66. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

67. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

68. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

69. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

70. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

71. spacer 3.4|3132525|32|NZ_CP027452|CRISPRCasFinder,CRT matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

72. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 8, identity: 0.75

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgctaaaacattggctttatttaatttttta	Protospacer
.  . ********* ******** *******.

73. spacer 4.9|3158986|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 8, identity: 0.75

cgggcgactggggcgggtttgttaatctcatg	CRISPR spacer
ccgaaaaatggggctggtttgttaatctgatc	Protospacer
* *. .* ****** ************* ** 

74. spacer 4.11|3159108|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 8, identity: 0.75

gactatcgcggactgctgaaatcaaccggcga	CRISPR spacer
gcgtcgcgcggactgccgaattcaaccggctc	Protospacer
*  *  **********.*** *********  

75. spacer 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044347 (Escherichia coli strain P225M plasmid pP225M-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
taagaacaaaacaagagcgaaatattatgcat	Protospacer
  . ********** ***.*********  *.

76. spacer 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 9, identity: 0.719

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
atgtaacaaaaaaacagtaaaatatggtgaga	Protospacer
*.********* *****.******* .* .. 

77. spacer 3.5|3132586|32|NZ_CP027452|CRISPRCasFinder,CRT,PILER-CR matches to AP014399 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C110A-MedDCM-OCT-S26-C20, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 9, identity: 0.719

ctaggataaattaaaagacaaaattgcagcaa	CRISPR spacer
gtcagataaattaaaagagataattgcaaatt	Protospacer
 * .************** * *******.   

78. spacer 3.5|3132586|32|NZ_CP027452|CRISPRCasFinder,CRT,PILER-CR matches to AP013383 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C110A-MedDCM-OCT-S24-C13) position: , mismatch: 9, identity: 0.719

ctaggataaattaaaagacaaaattgcagcaa	CRISPR spacer
gtcagataaattaaaagagataattgcaaatt	Protospacer
 * .************** * *******.   

79. spacer 3.6|3132647|32|NZ_CP027452|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021994 (Cryobacterium sp. LW097 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

gagcgaccagtatcaagatcgacaggttttgc	CRISPR spacer
gagcgaccagcagcaagatcgaccagacctca	Protospacer
**********.* ********** .* ..*  

80. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011404 (Lactobacillus salivarius str. Ren plasmid pR1, complete sequence) position: , mismatch: 9, identity: 0.719

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

81. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

82. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

83. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.719

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

84. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017110 (Lactobacillus salivarius strain CICC23174 plasmid pLS_3, complete sequence) position: , mismatch: 9, identity: 0.719

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

85. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029460 (Clostridium novyi strain 150557 plasmid pCN2, complete sequence) position: , mismatch: 9, identity: 0.719

cattgaaaacattgcctttattttattttttg	CRISPR spacer
aaaaaagaacattgtatttattttatttttaa	Protospacer
 *  .*.*******. ************** .

86. spacer 4.6|3158803|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN694106 (Marine virus AFVG_250M510, complete genome) position: , mismatch: 9, identity: 0.719

acaccccgctatctgcgcggctttacgagata	CRISPR spacer
ataccctgcaatctgcgcggctttagcggcgc	Protospacer
*.****.** ***************  .*   

87. spacer 4.11|3159108|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030830 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750c, complete sequence) position: , mismatch: 9, identity: 0.719

gactatcgcggactgctgaaatcaaccggcga	CRISPR spacer
gtgaagggcagactgctgaaatcatccggcag	Protospacer
*   *  **.************** *****..

88. spacer 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045561 (Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence) position: , mismatch: 10, identity: 0.688

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
taataaaaaaacaacagcaaaattttgaaaat	Protospacer
  .*** **************** **.  .*.

89. spacer 3.1|3132342|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014478 (Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence) position: , mismatch: 10, identity: 0.688

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
taataaaaaaacaacagcaaaattttgaaaat	Protospacer
  .*** **************** **.  .*.

90. spacer 3.7|3132708|32|NZ_CP027452|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 10, identity: 0.688

atcgatatgtacgttagcgaggggatcacgca	CRISPR spacer
ggcgatatttacgttagcgacgggactgacct	Protospacer
. ****** *********** ****...  * 

91. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NC_018511 (Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence) position: , mismatch: 10, identity: 0.688

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.*************** 

92. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NC_001446 (Bacillus thuringiensis sv israelensis HI4 plasmid pTX14-3, complete sequence) position: , mismatch: 10, identity: 0.688

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.*************** 

93. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009345 (Bacillus thuringiensis HD1002 plasmid 6, complete sequence) position: , mismatch: 10, identity: 0.688

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.*************** 

94. spacer 4.1|3158498|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.688

cattgaaaacattgcctttattttattttttg	CRISPR spacer
accttaaaacatttcctttgttttatttagat	Protospacer
  .* ******** *****.********    

95. spacer 4.7|3158864|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031468 (Paraburkholderia caffeinilytica strain CF1 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

cgatcggtgaagaggtccgcgaaatactcact	CRISPR spacer
taatcggtgacgacgtccgcgaaatcggagat	Protospacer
..******** ** ***********    . *

96. spacer 4.7|3158864|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014580 (Burkholderia sp. OLGA172 plasmid pOLGA1, complete sequence) position: , mismatch: 10, identity: 0.688

cgatcggtgaagaggtccgcgaaatactcact	CRISPR spacer
taatcggtgacgacgtccgcgaaatcggagat	Protospacer
..******** ** ***********    . *

97. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041048 (Citrobacter sp. CF971 plasmid pBM527-2, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

98. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN783744 (Klebsiella oxytoca plasmid pFDL-VIM, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

99. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NC_012885 (Aeromonas hydrophila plasmid pRA1, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

100. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042536 (Citrobacter freundii strain E51 plasmid pE51_002, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

101. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042479 (Citrobacter freundii strain C50 plasmid pC50_001, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

102. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034714 (Salmonella enterica subsp. enterica serovar Mikawasima strain RSE15 plasmid pRSE15, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

103. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012168 (Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-239.973kb, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

104. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to MN783743 (Escherichia coli plasmid pGA_VIM, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

105. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034084 (Klebsiella pneumoniae subsp. pneumoniae strain R210-2 plasmid pR210-2-VIM, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

106. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH220284 (Aeromonas sp. pRIVM0001_VIM-1 plasmid pRIVM0001_VIM-1_171012_B12, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

107. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG228427 (Kluyvera cryocrescens strain BO64W plasmid pKC-BO-N1-VIM, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

108. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG550958 (Escherichia coli strain G3216 plasmid pG3216.2, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

109. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH325469 (Enterobacter hormaechei strain Ec13 plasmid pEc13, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

110. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH325468 (Enterobacter hormaechei strain Ec09 plasmid pEc09, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

111. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH594478 (Citrobacter freundii strain AA593 plasmid pIBAC_Incx3_A/C, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

112. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH594477 (Citrobacter freundii strain AA535 plasmid pIBAC_IncA/C, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

113. spacer 4.15|3159352|32|NZ_CP027452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG053108 (Citrobacter freundii strain 33587 plasmid pCf587, complete sequence) position: , mismatch: 11, identity: 0.656

agttgagcgtctaccagttgattcgggatatt	CRISPR spacer
cattgagcgtctaccaggtgatacgtcgccaa	Protospacer
 .*************** **** **  ..   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1466 : 51956 60 Shigella_phage(48.78%) terminase,integrase,holin,tRNA,protease,head,tail,plate,portal,capsid attL 11240:11256|attR 54294:54310
DBSCAN-SWA_2 632407 : 686933 72 Enterobacteria_phage(53.33%) terminase,integrase,tRNA,protease,head,tail,portal,capsid,lysis attL 663466:663481|attR 691510:691525
DBSCAN-SWA_3 965776 : 1008198 37 Clostridioides_phage(33.33%) transposase,plate NA
DBSCAN-SWA_4 1616516 : 1669638 64 Escherichia_phage(52.63%) terminase,integrase,tRNA,holin,protease,portal,tail,lysis attL 1615071:1615086|attR 1663059:1663074
DBSCAN-SWA_5 2148368 : 2161432 17 Morganella_phage(30.0%) holin,integrase attL 2138592:2138604|attR 2161824:2161836
DBSCAN-SWA_6 3175889 : 3183029 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_7 3769056 : 3778502 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_8 4296568 : 4352856 75 Shigella_phage(56.25%) terminase,integrase,holin,protease,bacteriocin,tail,portal,capsid,lysis attL 4295279:4295296|attR 4315471:4315488
DBSCAN-SWA_9 4361739 : 4366446 11 Shigella_phage(36.36%) NA NA
DBSCAN-SWA_10 4624728 : 4698672 76 Stx2-converting_phage(27.66%) terminase,integrase,holin,transposase,protease,head,tail,capsid attL 4687222:4687236|attR 4695416:4695430
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage