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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP027367 Escherichia coli strain 89-3156 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP027366 Escherichia coli strain 89-3156 chromosome, complete genome 4 crisprs DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,WYL 0 10 14 0

Results visualization

1. NZ_CP027366
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027366_1 918544-918689 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027366_2 2323124-2323268 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027366_3 3141496-3142318 TypeI-E I-E
13 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027366_4 3168019-3168291 Orphan I-E
4 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP027366_3 3.1|3141525|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3141525-3141556 32 NZ_CP050442 Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence 41503-41534 6 0.812
NZ_CP027366_3 3.2|3141586|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3141586-3141617 32 CP000662 Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence 649166-649197 6 0.812
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 MG592492 Vibrio phage 1.118.A._10N.261.49.F6, partial genome 12969-13000 7 0.781
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 MG592493 Vibrio phage 1.118.B._10N.261.49.F6, partial genome 12969-13000 7 0.781
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 MG592428 Vibrio phage 1.046.O._10N.286.52.E3, partial genome 17038-17069 7 0.781
NZ_CP027366_3 3.2|3141586|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3141586-3141617 32 MT889371 Microbacterium phage DelaGarza, complete genome 35549-35580 8 0.75
NZ_CP027366_3 3.5|3141770|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3141770-3141801 32 NZ_CP035001 Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence 520072-520103 8 0.75
NZ_CP027366_3 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142075-3142106 32 NZ_CP029356 Azospirillum sp. CFH 70021 plasmid unnamed1 31124-31155 8 0.75
NZ_CP027366_4 4.3|3168170|32|NZ_CP027366|CRISPRCasFinder,CRT 3168170-3168201 32 NZ_CP030360 Salinibacter ruber strain SP38 plasmid pSR76, complete sequence 4393-4424 8 0.75
NZ_CP027366_4 4.7|3168171|32|NZ_CP027366|PILER-CR 3168171-3168202 32 NZ_CP030360 Salinibacter ruber strain SP38 plasmid pSR76, complete sequence 4393-4424 8 0.75
NZ_CP027366_3 3.2|3141586|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3141586-3141617 32 NZ_CP044425 Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence 203634-203665 9 0.719
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 MG969414 UNVERIFIED: Salmonella phage GE_vB_NS7, complete genome 5506-5537 9 0.719
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 MG969405 UNVERIFIED: Salmonella phage GE_vB_B1, complete genome 56664-56695 9 0.719
NZ_CP027366_3 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142075-3142106 32 MN694237 Marine virus AFVG_250M414, complete genome 6110-6141 9 0.719
NZ_CP027366_3 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142075-3142106 32 MN694607 Marine virus AFVG_250M465, complete genome 32645-32676 9 0.719
NZ_CP027366_3 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142075-3142106 32 MN694004 Marine virus AFVG_250M467, complete genome 6095-6126 9 0.719
NZ_CP027366_3 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142075-3142106 32 MN694734 Marine virus AFVG_250M466, complete genome 32496-32527 9 0.719
NZ_CP027366_4 4.3|3168170|32|NZ_CP027366|CRISPRCasFinder,CRT 3168170-3168201 32 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 1739097-1739128 9 0.719
NZ_CP027366_4 4.3|3168170|32|NZ_CP027366|CRISPRCasFinder,CRT 3168170-3168201 32 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 1743765-1743796 9 0.719
NZ_CP027366_4 4.4|3168231|32|NZ_CP027366|CRISPRCasFinder,CRT 3168231-3168262 32 NC_021909 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence 587304-587335 9 0.719
NZ_CP027366_4 4.7|3168171|32|NZ_CP027366|PILER-CR 3168171-3168202 32 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 1739097-1739128 9 0.719
NZ_CP027366_4 4.7|3168171|32|NZ_CP027366|PILER-CR 3168171-3168202 32 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 1743765-1743796 9 0.719
NZ_CP027366_4 4.8|3168232|32|NZ_CP027366|PILER-CR 3168232-3168263 32 NC_021909 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence 587304-587335 9 0.719
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 KF771238 Escherichia phage bV_EcoS_AHS24, complete genome 7523-7554 10 0.688
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 KF771237 Escherichia phage bV_EcoS_AHP42, complete genome 7522-7553 10 0.688
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 NC_024789 Escherichia phage bV_EcoS_AKS96, complete genome 7522-7553 10 0.688
NZ_CP027366_3 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142014-3142045 32 KF771236 Escherichia phage bV_EcoS_AHP24, complete genome 7522-7553 10 0.688
NZ_CP027366_3 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142197-3142228 32 MH697592 Mycobacterium phage Rando14, complete genome 21501-21532 10 0.688
NZ_CP027366_3 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142197-3142228 32 KM363596 Mycobacteriophage Omnicron, complete genome 21601-21632 10 0.688
NZ_CP027366_3 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142197-3142228 32 NC_023724 Mycobacterium phage Larva, complete genome 22682-22713 10 0.688
NZ_CP027366_3 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142197-3142228 32 MF185717 Mycobacterium phage AlleyCat, complete genome 22814-22845 10 0.688
NZ_CP027366_3 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142197-3142228 32 MF185719 Mycobacterium phage Edugator, complete genome 22814-22845 10 0.688
NZ_CP027366_4 4.3|3168170|32|NZ_CP027366|CRISPRCasFinder,CRT 3168170-3168201 32 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 809565-809596 10 0.688
NZ_CP027366_4 4.7|3168171|32|NZ_CP027366|PILER-CR 3168171-3168202 32 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 809565-809596 10 0.688
NZ_CP027366_3 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142197-3142228 32 MH651171 Mycobacterium phage Collard, complete genome 22841-22872 11 0.656
NZ_CP027366_3 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT 3142197-3142228 32 NC_028947 Mycobacterium phage Kratio, complete genome 22515-22546 11 0.656

1. spacer 3.1|3141525|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050442 (Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

aaaaccaaacttctccataaattccatagccg	CRISPR spacer
attactaaacttctgcataaattccataggag	Protospacer
*  **.******** **************  *

2. spacer 3.2|3141586|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 6, identity: 0.812

acgcgcgtaccggatcgcggacaacaaattgc	CRISPR spacer
gcgggcgtaccgcatcgcggacaacaagctga	Protospacer
.** ******** **************..** 

3. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MG592492 (Vibrio phage 1.118.A._10N.261.49.F6, partial genome) position: , mismatch: 7, identity: 0.781

gggttcccgttcactgacgaaattg---agtgcga	CRISPR spacer
gcgttcccgttcactgaagatattgcaaagtc---	Protospacer
* *************** ** ****   ***    

4. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MG592493 (Vibrio phage 1.118.B._10N.261.49.F6, partial genome) position: , mismatch: 7, identity: 0.781

gggttcccgttcactgacgaaattg---agtgcga	CRISPR spacer
gcgttcccgttcactgaagatattgcaaagtc---	Protospacer
* *************** ** ****   ***    

5. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MG592428 (Vibrio phage 1.046.O._10N.286.52.E3, partial genome) position: , mismatch: 7, identity: 0.781

gggttcccgttcactgacgaaattg---agtgcga	CRISPR spacer
gcgttcccgttcactgaagatattgcaaagtc---	Protospacer
* *************** ** ****   ***    

6. spacer 3.2|3141586|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MT889371 (Microbacterium phage DelaGarza, complete genome) position: , mismatch: 8, identity: 0.75

acgcgcgtaccggatcgcggacaacaaattgc	CRISPR spacer
gcgcgcctaccggatcgcggacaaccgcacgg	Protospacer
.***** ****************** .  .* 

7. spacer 3.5|3141770|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgcctggctctggcgctaaatgtgagcgc	CRISPR spacer
caccgcctggctctggcgtttaatgaaatggt	Protospacer
*.****************.* **** .*  *.

8. spacer 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

tcacatttgccctgttcccgttggtcgcgcag	CRISPR spacer
tgcaggtcgccctgttccggctggtcgcgcag	Protospacer
*   . *.********** *.***********

9. spacer 4.3|3168170|32|NZ_CP027366|CRISPRCasFinder,CRT matches to NZ_CP030360 (Salinibacter ruber strain SP38 plasmid pSR76, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgccgccgctgtcgttcggtagtgtccgg---	CRISPR spacer
ggccgccgccactgtcgttcggaag---gcgagcc	Protospacer
* ********.*********** **    **.   

10. spacer 4.7|3168171|32|NZ_CP027366|PILER-CR matches to NZ_CP030360 (Salinibacter ruber strain SP38 plasmid pSR76, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgccgccgctgtcgttcggtagtgtccgg---	CRISPR spacer
ggccgccgccactgtcgttcggaag---gcgagcc	Protospacer
* ********.*********** **    **.   

11. spacer 3.2|3141586|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcgtaccggatcgcggacaacaaattgc------	CRISPR spacer
tcgcgcggaccggatcgcggccaa------gccccgcg	Protospacer
 ****** ************ ***      **      

12. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MG969414 (UNVERIFIED: Salmonella phage GE_vB_NS7, complete genome) position: , mismatch: 9, identity: 0.719

gggttcccgttcactgacgaaattgagtgcga	CRISPR spacer
ttatcggtattcactgacgaaatttagtgcga	Protospacer
  .*.  ..*************** *******

13. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MG969405 (UNVERIFIED: Salmonella phage GE_vB_B1, complete genome) position: , mismatch: 9, identity: 0.719

gggttcccgttcactgacgaaattgagtgcga	CRISPR spacer
ttatcggtattcactgacgaaatttagtgcga	Protospacer
  .*.  ..*************** *******

14. spacer 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MN694237 (Marine virus AFVG_250M414, complete genome) position: , mismatch: 9, identity: 0.719

tcacatttgccctgttcccgttggtcgcgcag	CRISPR spacer
gcccatttgccctgttcccatttgtccagtgc	Protospacer
 * ****************.** ***  *.. 

15. spacer 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MN694607 (Marine virus AFVG_250M465, complete genome) position: , mismatch: 9, identity: 0.719

tcacatttgccctgttcccgttggtcgcgcag	CRISPR spacer
gcccatttgccctgttcccatttgtccagtgc	Protospacer
 * ****************.** ***  *.. 

16. spacer 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MN694004 (Marine virus AFVG_250M467, complete genome) position: , mismatch: 9, identity: 0.719

tcacatttgccctgttcccgttggtcgcgcag	CRISPR spacer
gcccatttgccctgttcccatttgtcctgtgc	Protospacer
 * ****************.** *** .*.. 

17. spacer 3.10|3142075|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MN694734 (Marine virus AFVG_250M466, complete genome) position: , mismatch: 9, identity: 0.719

tcacatttgccctgttcccgttggtcgcgcag	CRISPR spacer
gcccatttgccctgttcccatttgtccagtgc	Protospacer
 * ****************.** ***  *.. 

18. spacer 4.3|3168170|32|NZ_CP027366|CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgccgccgctgtcgttcggtagtgtccgg	CRISPR spacer
gcccgccgccgctgccgtgcggttactcgcgt	Protospacer
**************.*** **** .. . ** 

19. spacer 4.3|3168170|32|NZ_CP027366|CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgccgccgctgtcgttcggtagtgtccgg	CRISPR spacer
gcccgccgccgctgccgtgcggttactcgcgt	Protospacer
**************.*** **** .. . ** 

20. spacer 4.4|3168231|32|NZ_CP027366|CRISPRCasFinder,CRT matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 9, identity: 0.719

caggcagagaatgactatttttctacaaatct	CRISPR spacer
tattttgagaatgactatttttccaaaaaagt	Protospacer
.*  . *****************.* ***  *

21. spacer 4.7|3168171|32|NZ_CP027366|PILER-CR matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgccgccgctgtcgttcggtagtgtccgg	CRISPR spacer
gcccgccgccgctgccgtgcggttactcgcgt	Protospacer
**************.*** **** .. . ** 

22. spacer 4.7|3168171|32|NZ_CP027366|PILER-CR matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgccgccgctgtcgttcggtagtgtccgg	CRISPR spacer
gcccgccgccgctgccgtgcggttactcgcgt	Protospacer
**************.*** **** .. . ** 

23. spacer 4.8|3168232|32|NZ_CP027366|PILER-CR matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 9, identity: 0.719

caggcagagaatgactatttttctacaaatct	CRISPR spacer
tattttgagaatgactatttttccaaaaaagt	Protospacer
.*  . *****************.* ***  *

24. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to KF771238 (Escherichia phage bV_EcoS_AHS24, complete genome) position: , mismatch: 10, identity: 0.688

gggttcccgttcactgacgaaattgagtgcga	CRISPR spacer
ctgttcccggtcactaacgaaattggcgctta	Protospacer
  ******* *****.*********.   . *

25. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to KF771237 (Escherichia phage bV_EcoS_AHP42, complete genome) position: , mismatch: 10, identity: 0.688

gggttcccgttcactgacgaaattgagtgcga	CRISPR spacer
ctgttcccggtcactaacgaaattggcgctta	Protospacer
  ******* *****.*********.   . *

26. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to NC_024789 (Escherichia phage bV_EcoS_AKS96, complete genome) position: , mismatch: 10, identity: 0.688

gggttcccgttcactgacgaaattgagtgcga	CRISPR spacer
ctgttcccggtcactaacgaaattggcgctta	Protospacer
  ******* *****.*********.   . *

27. spacer 3.9|3142014|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to KF771236 (Escherichia phage bV_EcoS_AHP24, complete genome) position: , mismatch: 10, identity: 0.688

gggttcccgttcactgacgaaattgagtgcga	CRISPR spacer
ctgttcccggtcactaacgaaattggcgctta	Protospacer
  ******* *****.*********.   . *

28. spacer 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MH697592 (Mycobacterium phage Rando14, complete genome) position: , mismatch: 10, identity: 0.688

gctcgtctgcgtattcgtagcagtcaacaata	CRISPR spacer
tgtcgtctgcgtatgcgcagcagtcagttgac	Protospacer
  ************ **.********.. .  

29. spacer 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to KM363596 (Mycobacteriophage Omnicron, complete genome) position: , mismatch: 10, identity: 0.688

gctcgtctgcgtattcgtagcagtcaacaata	CRISPR spacer
tgtcgtctgcgtatgcgcagcagtcagttgac	Protospacer
  ************ **.********.. .  

30. spacer 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to NC_023724 (Mycobacterium phage Larva, complete genome) position: , mismatch: 10, identity: 0.688

gctcgtctgcgtattcgtagcagtcaacaata	CRISPR spacer
tgtcgtctgcgtatgcgcagcagtcagttgac	Protospacer
  ************ **.********.. .  

31. spacer 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MF185717 (Mycobacterium phage AlleyCat, complete genome) position: , mismatch: 10, identity: 0.688

gctcgtctgcgtattcgtagcagtcaacaata	CRISPR spacer
tgtcgtctgcgtatgcgcagcagtcagttgac	Protospacer
  ************ **.********.. .  

32. spacer 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MF185719 (Mycobacterium phage Edugator, complete genome) position: , mismatch: 10, identity: 0.688

gctcgtctgcgtattcgtagcagtcaacaata	CRISPR spacer
tgtcgtctgcgtatgcgcagcagtcagttgac	Protospacer
  ************ **.********.. .  

33. spacer 4.3|3168170|32|NZ_CP027366|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgccgccgctgtcgttcggtagtgtccgg	CRISPR spacer
tgccgccgccgctgtggttcggcagcgcgttt	Protospacer
  ************* ******.**.*. .  

34. spacer 4.7|3168171|32|NZ_CP027366|PILER-CR matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 10, identity: 0.688

gcccgccgccgctgtcgttcggtagtgtccgg	CRISPR spacer
tgccgccgccgctgtggttcggcagcgcgttt	Protospacer
  ************* ******.**.*. .  

35. spacer 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to MH651171 (Mycobacterium phage Collard, complete genome) position: , mismatch: 11, identity: 0.656

gctcgtctgcgtattcgtagcagtcaacaata	CRISPR spacer
tgtcgtctgcgtatgcgcagcagtcggttgac	Protospacer
  ************ **.*******... .  

36. spacer 3.12|3142197|32|NZ_CP027366|PILER-CR,CRISPRCasFinder,CRT matches to NC_028947 (Mycobacterium phage Kratio, complete genome) position: , mismatch: 11, identity: 0.656

gctcgtctgcgtattcgtagcagtcaacaata	CRISPR spacer
tgtcgtctgcgtatgcgcagcagtcggttgac	Protospacer
  ************ **.*******... .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 258565 : 320756 52 Emiliania_huxleyi_virus(12.5%) transposase,tRNA,protease,plate NA
DBSCAN-SWA_2 633751 : 700757 78 Enterobacteria_phage(63.16%) head,portal,terminase,protease,lysis,capsid,transposase,tail,tRNA,integrase attL 643913:643959|attR 692231:692277
DBSCAN-SWA_3 972433 : 1079086 109 Salmonella_phage(63.46%) head,portal,terminase,protease,lysis,plate,capsid,transposase,tail,tRNA,integrase attL 1001155:1001171|attR 1026956:1026972
DBSCAN-SWA_4 1334920 : 1395445 70 Escherichia_phage(37.25%) head,portal,terminase,capsid,holin,tail,tRNA,integrase attL 1326186:1326203|attR 1384679:1384696
DBSCAN-SWA_5 2077057 : 2175182 106 Enterobacteria_phage(28.57%) head,terminase,protease,lysis,capsid,holin,transposase,tail,tRNA,integrase attL 2141992:2142007|attR 2175549:2175564
DBSCAN-SWA_6 2367171 : 2430524 71 Escherichia_phage(46.51%) head,portal,terminase,lysis,plate,capsid,holin,tail,tRNA,integrase attL 2372229:2372255|attR 2403249:2403275
DBSCAN-SWA_7 2444167 : 2452476 9 Enterobacteria_phage(83.33%) NA NA
DBSCAN-SWA_8 2840821 : 2966119 115 Escherichia_phage(44.64%) portal,terminase,protease,lysis,holin,tail,tRNA,integrase attL 2874816:2874847|attR 2961942:2961973
DBSCAN-SWA_9 2985161 : 3025281 54 Enterobacteria_phage(84.78%) head,portal,terminase,protease,plate,capsid,holin,tail,integrase attL 2979606:2979619|attR 3022662:3022675
DBSCAN-SWA_10 3118001 : 3125141 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_11 3427438 : 3438923 12 Stx2-converting_phage(33.33%) transposase NA
DBSCAN-SWA_12 4205259 : 4292679 88 Shigella_phage(51.22%) head,protease,plate,transposase,tail,tRNA,integrase attL 4204900:4204915|attR 4281750:4281765
DBSCAN-SWA_13 4881560 : 4932330 55 Vibrio_phage(12.5%) transposase,tRNA,protease NA
DBSCAN-SWA_14 5034142 : 5038745 7 Stx2-converting_phage(33.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage