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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP027589 Escherichia coli strain 2014C-3011 plasmid unnamed1 0 crisprs NA 0 0 1 0
NZ_CP027592 Escherichia coli strain 2014C-3011 plasmid unnamed3 0 crisprs NA 0 0 0 0
NZ_CP027591 Escherichia coli strain 2014C-3011 chromosome, complete genome 7 crisprs csa3,cas3,cas8e,cas7,cas6e,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol 0 4 307 0
NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 0 crisprs NA 0 0 3 0

Results visualization

1. NZ_CP027589
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 50830 : 63098 12 Stx2-converting_phage(81.82%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP027591
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027591_1 488204-488324 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027591_2 830105-830193 Orphan I-E
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027591_3 857646-857799 TypeI-E I-E
2 spacers
cas2,cas6e,cas7,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027591_4 2178762-2178885 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027591_5 3005038-3005129 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027591_6 3400870-3401014 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027591_7 4067312-4067427 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP027591_5 5.1|3005064|40|NZ_CP027591|CRISPRCasFinder 3005064-3005103 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP027591_7 7.1|4067343|54|NZ_CP027591|CRISPRCasFinder 4067343-4067396 54 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 165411-165464 1 0.981
NZ_CP027591_4 4.1|2178805|38|NZ_CP027591|CRISPRCasFinder 2178805-2178842 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP027591_3 3.1|857678|29|NZ_CP027591|PILER-CR 857678-857706 29 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 19327-19355 6 0.793
NZ_CP027591_3 3.1|857678|29|NZ_CP027591|PILER-CR 857678-857706 29 MK448454 Streptococcus satellite phage Javan361, complete genome 9192-9220 7 0.759
NZ_CP027591_7 7.1|4067343|54|NZ_CP027591|CRISPRCasFinder 4067343-4067396 54 NZ_CP048385 Citrobacter freundii strain 62 plasmid p6_C, complete sequence 72431-72484 12 0.778

1. spacer 5.1|3005064|40|NZ_CP027591|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcattcttgaaattccccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
************************ ***************

2. spacer 7.1|4067343|54|NZ_CP027591|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.981

tggcctacacgctgcgattttgtaggccggataagcaaagcgcatccggcattc	CRISPR spacer
tggcctacacgctgcgattttgtaggccggataagcaaagcgcatccggcattg	Protospacer
***************************************************** 

3. spacer 4.1|2178805|38|NZ_CP027591|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

4. spacer 3.1|857678|29|NZ_CP027591|PILER-CR matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 6, identity: 0.793

gtttggtc--caccaaatgtttgatgcttca	CRISPR spacer
--ttacccgacaccaaatgtttggtgcttca	Protospacer
  **. .*  *************.*******

5. spacer 3.1|857678|29|NZ_CP027591|PILER-CR matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 7, identity: 0.759

gtttggtccaccaaatgtttgatgcttca	CRISPR spacer
tatcaatccaccaaatttttgattcttca	Protospacer
  *...********** ****** *****

6. spacer 7.1|4067343|54|NZ_CP027591|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 12, identity: 0.778

tggcctacacgct-----gcgattttgtaggccggataagcaaagcgcatccggcattc	CRISPR spacer
-----tacaaattaattcgcggtattgtaggccggataagcaaagcgcatccggcagta	Protospacer
     **** ..*     ***.* ******************************** * 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 4200 3 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_2 29926 : 31468 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 36787 : 37783 1 Escherichia_coli_O157_typing_phage(100.0%) NA NA
DBSCAN-SWA_4 42006 : 42219 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_5 59195 : 61180 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_6 108932 : 109580 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_7 114461 : 116597 3 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_8 119942 : 121985 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_9 136362 : 142259 6 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_10 150151 : 154283 4 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_11 157286 : 160105 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_12 165838 : 167321 2 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_13 170862 : 172673 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_14 192683 : 195131 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_15 205134 : 206361 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_16 210739 : 213133 1 Iris_mild_mosaic_virus(100.0%) NA NA
DBSCAN-SWA_17 219163 : 220042 1 Sodalis_phage(100.0%) NA NA
DBSCAN-SWA_18 226605 : 230372 3 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_19 247347 : 248184 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_20 272413 : 281953 9 Acinetobacter_phage(25.0%) NA NA
DBSCAN-SWA_21 287522 : 293096 7 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_22 312973 : 314445 2 Prochlorococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_23 324781 : 328934 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_24 335437 : 336322 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_25 347642 : 348686 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_26 365179 : 367704 2 uncultured_archaeal_virus(50.0%) protease NA
DBSCAN-SWA_27 371669 : 378699 6 Pseudomonas_phage(33.33%) transposase,protease NA
DBSCAN-SWA_28 388315 : 403109 17 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_29 407177 : 408655 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_30 415283 : 418156 2 Micromonas_pusilla_virus(50.0%) protease NA
DBSCAN-SWA_31 421358 : 427997 4 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_32 433478 : 435368 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_33 441195 : 448987 10 Diadromus_pulchellus_ascovirus(25.0%) NA NA
DBSCAN-SWA_34 471995 : 473141 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 481293 : 483402 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_36 510419 : 511385 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_37 524233 : 540418 12 Herpes_simplex_virus(16.67%) tRNA NA
DBSCAN-SWA_38 546799 : 548038 1 Sinorhizobium_phage(100.0%) tRNA NA
DBSCAN-SWA_39 553175 : 554609 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_40 564124 : 571309 8 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_41 578325 : 589148 9 Stx_converting_phage(25.0%) NA NA
DBSCAN-SWA_42 595224 : 596109 1 Diadromus_pulchellus_ascovirus(100.0%) NA NA
DBSCAN-SWA_43 618328 : 619501 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_44 623010 : 626927 5 Stx2-converting_phage(60.0%) transposase,integrase attL 612926:612939|attR 630156:630169
DBSCAN-SWA_45 653636 : 654791 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_46 667491 : 668169 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_47 686176 : 687409 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_48 695937 : 701310 3 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_49 705234 : 720625 14 Brevibacillus_phage(14.29%) tRNA NA
DBSCAN-SWA_50 741305 : 742061 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_51 751533 : 754028 2 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_52 763659 : 770432 6 Moraxella_phage(33.33%) NA NA
DBSCAN-SWA_53 775909 : 791186 9 Klosneuvirus(16.67%) tRNA NA
DBSCAN-SWA_54 802712 : 803468 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_55 808326 : 809175 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_56 816709 : 820824 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_57 824856 : 829765 4 Only_Syngen_Nebraska_virus(33.33%) NA NA
DBSCAN-SWA_58 834707 : 835493 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_59 850840 : 852053 1 Enterobacteria_phage(100.0%) transposase NA
DBSCAN-SWA_60 860076 : 862109 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_61 865221 : 868937 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_62 874152 : 881292 5 Escherichia_phage(80.0%) NA NA
DBSCAN-SWA_63 900755 : 901769 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_64 909244 : 910210 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_65 915676 : 921236 5 Pseudomonas_phage(25.0%) tRNA NA
DBSCAN-SWA_66 934286 : 939582 4 Bacillus_virus(25.0%) NA NA
DBSCAN-SWA_67 943518 : 947643 4 Clostridium_phage(50.0%) NA NA
DBSCAN-SWA_68 960941 : 962453 1 unidentified_phage(100.0%) NA NA
DBSCAN-SWA_69 966197 : 1053358 94 Salmonella_phage(60.0%) tRNA,plate,terminase,integrase,tail,head,capsid,lysis,portal attL 975462:975506|attR 1010491:1010535
DBSCAN-SWA_70 1059130 : 1062873 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_71 1066332 : 1066593 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_72 1070712 : 1082002 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_73 1087758 : 1089270 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_74 1104406 : 1110863 8 Faustovirus(20.0%) NA NA
DBSCAN-SWA_75 1120747 : 1121179 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_76 1130009 : 1136306 6 Escherichia_phage(60.0%) NA NA
DBSCAN-SWA_77 1142741 : 1146743 4 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_78 1167986 : 1168700 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_79 1186634 : 1187585 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_80 1206345 : 1211274 6 Deep-sea_thermophilic_phage(33.33%) NA NA
DBSCAN-SWA_81 1214750 : 1230120 15 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_82 1233458 : 1347207 103 Enterobacteria_phage(53.19%) tRNA,plate,tail,integrase,transposase,holin,protease attL 1273353:1273369|attR 1300475:1300491
DBSCAN-SWA_83 1351792 : 1353310 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_84 1357521 : 1359382 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_85 1369940 : 1373168 3 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_86 1409519 : 1412534 2 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_87 1416138 : 1420454 4 Oenococcus_phage(50.0%) transposase NA
DBSCAN-SWA_88 1426347 : 1440533 8 Pseudomonas_phage(33.33%) NA NA
DBSCAN-SWA_89 1450127 : 1452977 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_90 1457139 : 1462829 5 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_91 1471597 : 1472215 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_92 1483919 : 1491568 7 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_93 1497322 : 1501622 4 Clostridioides_phage(50.0%) NA NA
DBSCAN-SWA_94 1516118 : 1516976 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_95 1521046 : 1524832 3 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_96 1528526 : 1530047 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_97 1536055 : 1649463 115 Enterobacteria_phage(38.67%) tRNA,terminase,integrase,tail,head,capsid,transposase,lysis,holin,protease attL 1533766:1533782|attR 1616432:1616448
DBSCAN-SWA_98 1653397 : 1658310 6 Bacillus_phage(66.67%) tRNA NA
DBSCAN-SWA_99 1667513 : 1682561 21 Enterobacteria_phage(35.71%) tail,terminase,integrase attL 1658736:1658751|attR 1678870:1678885
DBSCAN-SWA_100 1690597 : 1691950 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_101 1696615 : 1707268 8 Catovirus(20.0%) NA NA
DBSCAN-SWA_102 1711511 : 1718305 6 Synechococcus_phage(25.0%) NA NA
DBSCAN-SWA_103 1725371 : 1731404 6 Enterobacteria_phage(40.0%) NA NA
DBSCAN-SWA_104 1734703 : 1742512 7 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_105 1749951 : 1750851 1 Cellulophaga_phage(100.0%) NA NA
DBSCAN-SWA_106 1760029 : 1849633 105 Escherichia_phage(40.3%) plate,tail,integrase,head,transposase,holin,protease attL 1774945:1774961|attR 1859081:1859097
DBSCAN-SWA_107 1853951 : 1866423 12 Bacillus_phage(28.57%) NA NA
DBSCAN-SWA_108 1880441 : 1881110 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_109 1892771 : 1893524 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_110 1905514 : 1907029 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_111 1917113 : 1922757 5 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_112 1928011 : 1929745 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_113 1936361 : 1938412 3 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_114 1942430 : 1949496 9 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_115 1953496 : 1954972 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_116 1963027 : 1967497 7 Klebsiella_phage(33.33%) NA NA
DBSCAN-SWA_117 1974993 : 1977042 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_118 1982372 : 1982582 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_119 1993640 : 2001746 8 Pandoravirus(33.33%) tRNA NA
DBSCAN-SWA_120 2016497 : 2017988 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_121 2024392 : 2025247 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_122 2037503 : 2038145 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_123 2043069 : 2045031 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_124 2050629 : 2051283 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_125 2058047 : 2059268 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_126 2066744 : 2142349 83 Enterobacteria_phage(75.51%) tRNA,plate,terminase,tail,integrase,head,capsid,transposase,holin,portal attL 2096353:2096377|attR 2130091:2130115
DBSCAN-SWA_127 2160941 : 2166025 5 Lake_Baikal_phage(33.33%) NA NA
DBSCAN-SWA_128 2174313 : 2176580 3 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_129 2182079 : 2190872 9 Orpheovirus(20.0%) NA NA
DBSCAN-SWA_130 2199674 : 2201173 2 Indivirus(50.0%) NA NA
DBSCAN-SWA_131 2208084 : 2209359 1 Pectobacterium_phage(100.0%) tRNA NA
DBSCAN-SWA_132 2229231 : 2231043 1 Vaccinia_virus(100.0%) NA NA
DBSCAN-SWA_133 2240938 : 2242240 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_134 2260001 : 2264566 4 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_135 2269448 : 2363683 105 Enterobacteria_phage(34.29%) terminase,integrase,tail,transposase,holin,portal,protease attL 2273890:2273949|attR 2371627:2372392
DBSCAN-SWA_136 2367063 : 2367873 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_137 2372656 : 2373547 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_138 2376549 : 2376933 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_139 2384678 : 2386097 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_140 2404798 : 2406071 1 Shigella_phage(100.0%) transposase NA
DBSCAN-SWA_141 2428935 : 2432742 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_142 2438027 : 2438954 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_143 2442245 : 2443686 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_144 2449699 : 2449990 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_145 2456875 : 2458420 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_146 2462780 : 2528325 54 Stx2-converting_phage(37.14%) transposase,head,capsid,tail NA
DBSCAN-SWA_147 2559685 : 2560675 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_148 2566910 : 2620203 64 Escherichia_phage(41.38%) tRNA,terminase,tail,integrase,transposase,holin,portal,protease attL 2567545:2567570|attR 2614841:2614866
DBSCAN-SWA_149 2624974 : 2625490 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_150 2645862 : 2646945 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_151 2660947 : 2662213 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_152 2673517 : 2679169 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_153 2686984 : 2687575 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_154 2692499 : 2697791 4 Tupanvirus(33.33%) protease NA
DBSCAN-SWA_155 2702723 : 2705681 2 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_156 2717339 : 2719354 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_157 2727762 : 2737654 10 Citrobacter_phage(25.0%) NA NA
DBSCAN-SWA_158 2752480 : 2756488 5 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_159 2759623 : 2762375 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_160 2789044 : 2904279 133 Enterobacteria_phage(30.49%) tRNA,terminase,tail,integrase,head,capsid,transposase,lysis,holin,protease attL 2883887:2883907|attR 2908035:2908055
DBSCAN-SWA_161 2911568 : 2911826 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_162 2924157 : 2925800 2 Streptococcus_virus(50.0%) NA NA
DBSCAN-SWA_163 2929072 : 2930254 2 Ralstonia_phage(50.0%) NA NA
DBSCAN-SWA_164 2942611 : 2943553 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_165 2959402 : 2959648 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_166 2964309 : 2965230 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_167 2974538 : 2975072 1 Red_sea_bream_iridovirus(100.0%) NA NA
DBSCAN-SWA_168 2979205 : 2980039 1 Pelagibacter_phage(100.0%) NA NA
DBSCAN-SWA_169 2984871 : 3085954 104 Enterobacteria_phage(25.71%) terminase,tail,integrase,transposase,holin,protease attL 3059956:3059971|attR 3077452:3077467
DBSCAN-SWA_170 3090621 : 3092529 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_171 3108463 : 3119596 8 Bacillus_virus(20.0%) tRNA NA
DBSCAN-SWA_172 3134301 : 3138842 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_173 3143928 : 3145017 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_174 3149115 : 3152330 2 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_175 3158637 : 3175268 10 Escherichia_phage(25.0%) tRNA NA
DBSCAN-SWA_176 3179589 : 3181760 4 Klebsiella_phage(33.33%) NA NA
DBSCAN-SWA_177 3191465 : 3191891 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_178 3204822 : 3206678 2 uncultured_marine_virus(50.0%) NA NA
DBSCAN-SWA_179 3222747 : 3272366 45 Stx2-converting_phage(21.05%) transposase,protease NA
DBSCAN-SWA_180 3281662 : 3283381 1 Yellowstone_lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_181 3286968 : 3289706 4 Roseobacter_phage(50.0%) NA NA
DBSCAN-SWA_182 3293042 : 3302191 11 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_183 3310755 : 3311958 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_184 3324066 : 3325938 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_185 3329153 : 3337495 6 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_186 3342492 : 3347695 7 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_187 3351235 : 3366004 12 Erwinia_phage(14.29%) NA NA
DBSCAN-SWA_188 3376601 : 3377510 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_189 3383991 : 3399386 23 Enterobacteria_phage(41.18%) transposase,integrase,holin,tail attL 3385907:3385921|attR 3399460:3399474
DBSCAN-SWA_190 3409960 : 3416532 7 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_191 3420885 : 3424405 4 Klebsiella_phage(33.33%) NA NA
DBSCAN-SWA_192 3460060 : 3460852 1 Kaumoebavirus(100.0%) NA NA
DBSCAN-SWA_193 3464230 : 3467172 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_194 3480968 : 3481646 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_195 3493215 : 3497028 2 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_196 3501794 : 3503459 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_197 3507554 : 3508634 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_198 3516529 : 3520062 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_199 3525117 : 3527700 1 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_200 3534710 : 3537149 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_201 3541964 : 3542611 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_202 3558036 : 3560151 2 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_203 3563261 : 3565084 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_204 3579715 : 3586532 3 Klosneuvirus(50.0%) transposase NA
DBSCAN-SWA_205 3597964 : 3601108 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_206 3616516 : 3619647 4 Enterococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_207 3631841 : 3632987 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_208 3639178 : 3640960 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_209 3654013 : 3654700 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_210 3657836 : 3658514 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_211 3663053 : 3666114 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_212 3674359 : 3682817 8 Acanthamoeba_polyphaga_moumouvirus(25.0%) NA NA
DBSCAN-SWA_213 3689825 : 3692975 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_214 3701812 : 3705359 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_215 3708681 : 3709377 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_216 3712505 : 3717552 4 Bacillus_phage(25.0%) protease NA
DBSCAN-SWA_217 3741259 : 3750240 10 uncultured_Mediterranean_phage(60.0%) tRNA NA
DBSCAN-SWA_218 3757192 : 3767164 7 Bacillus_phage(60.0%) NA NA
DBSCAN-SWA_219 3771452 : 3772568 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_220 3779983 : 3781141 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_221 3788079 : 3788847 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_222 3794917 : 3796027 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_223 3799217 : 3801178 2 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_224 3806588 : 3810868 2 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_225 3815407 : 3816307 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_226 3819396 : 3821283 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_227 3836197 : 3837067 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_228 3843112 : 3843964 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_229 3848456 : 3884276 30 Enterobacteria_phage(40.0%) transposase,plate,integrase attL 3848442:3848501|attR 3865325:3866091
DBSCAN-SWA_230 3899643 : 3903845 5 Bradyrhizobium_phage(33.33%) NA NA
DBSCAN-SWA_231 3912931 : 3913963 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_232 3926640 : 3930756 2 Saccharomonospora_phage(50.0%) NA NA
DBSCAN-SWA_233 3939584 : 3940343 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_234 3952227 : 3953652 1 uncultured_Mediterranean_phage(100.0%) protease NA
DBSCAN-SWA_235 3957581 : 3957926 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_236 3963837 : 3964635 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_237 3969878 : 3976684 6 Acanthamoeba_polyphaga_mimivirus(50.0%) tRNA NA
DBSCAN-SWA_238 3986590 : 3987493 1 Sodalis_phage(100.0%) NA NA
DBSCAN-SWA_239 3990755 : 3997223 5 Anomala_cuprea_entomopoxvirus(33.33%) NA NA
DBSCAN-SWA_240 4004966 : 4006391 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_241 4015005 : 4015557 1 Sphingobium_phage(100.0%) NA NA
DBSCAN-SWA_242 4019791 : 4020835 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_243 4046814 : 4048539 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_244 4061243 : 4061942 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_245 4068261 : 4073683 2 Yellowstone_lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_246 4081427 : 4082827 2 Microcystis_phage(50.0%) NA NA
DBSCAN-SWA_247 4090721 : 4096382 4 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_248 4101852 : 4103001 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_249 4107444 : 4110261 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_250 4117302 : 4126367 8 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_251 4134627 : 4175813 40 Stx2-converting_phage(23.53%) tRNA,tail NA
DBSCAN-SWA_252 4179095 : 4217169 52 Escherichia_phage(42.86%) terminase,tail,integrase,head,capsid,transposase,lysis,holin attL 4190369:4190384|attR 4224383:4224398
DBSCAN-SWA_253 4306725 : 4312822 6 Paramecium_bursaria_Chlorella_virus(66.67%) NA NA
DBSCAN-SWA_254 4316460 : 4319222 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_255 4323404 : 4324403 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_256 4329360 : 4329891 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_257 4358478 : 4405919 47 Ralstonia_phage(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_258 4410839 : 4411373 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_259 4415896 : 4417880 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_260 4427082 : 4433809 4 Enterobacteria_phage(33.33%) transposase NA
DBSCAN-SWA_261 4458065 : 4459604 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_262 4470377 : 4470956 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_263 4478899 : 4482111 2 Acinetobacter_phage(50.0%) tRNA NA
DBSCAN-SWA_264 4503275 : 4504778 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_265 4509615 : 4510404 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_266 4528770 : 4530918 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_267 4540201 : 4542160 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_268 4547744 : 4624395 81 Stx2-converting_phage(29.69%) tRNA,plate,terminase,tail,integrase,transposase,holin attL 4555152:4555169|attR 4583142:4583159
DBSCAN-SWA_269 4628591 : 4629200 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_270 4638321 : 4639437 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_271 4665014 : 4668698 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_272 4684753 : 4686343 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_273 4691711 : 4693475 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_274 4702193 : 4712504 4 Shigella_phage(33.33%) transposase NA
DBSCAN-SWA_275 4716623 : 4719676 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_276 4728180 : 4730025 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_277 4747125 : 4749423 1 Serratia_phage(100.0%) NA NA
DBSCAN-SWA_278 4753708 : 4754371 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_279 4774075 : 4778579 5 Erwinia_phage(50.0%) NA NA
DBSCAN-SWA_280 4790153 : 4795014 5 Feldmannia_irregularis_virus(33.33%) NA NA
DBSCAN-SWA_281 4809777 : 4812828 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_282 4820150 : 4822930 3 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_283 4839152 : 4841623 2 Ectocarpus_siliculosus_virus(50.0%) NA NA
DBSCAN-SWA_284 4845701 : 4848488 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_285 4862126 : 4862741 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_286 4871432 : 4874719 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_287 4887131 : 4888961 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_288 4894736 : 4898595 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_289 4917083 : 4923227 6 Enterobacteria_phage(40.0%) NA NA
DBSCAN-SWA_290 4927269 : 4932681 4 Indivirus(33.33%) NA NA
DBSCAN-SWA_291 4941151 : 4942798 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_292 4956189 : 4962042 5 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_293 4965210 : 4966203 1 Heterosigma_akashiwo_virus(100.0%) NA NA
DBSCAN-SWA_294 4978154 : 4981516 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_295 4987048 : 4990889 4 Cyanophage(50.0%) NA NA
DBSCAN-SWA_296 5001877 : 5003215 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_297 5013413 : 5020782 8 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_298 5025423 : 5026572 1 Oenococcus_phage(100.0%) NA NA
DBSCAN-SWA_299 5030998 : 5031952 2 Cyanophage(50.0%) NA NA
DBSCAN-SWA_300 5038304 : 5047465 10 Aeromonas_phage(25.0%) NA NA
DBSCAN-SWA_301 5054768 : 5056103 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_302 5062470 : 5068873 4 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_303 5081771 : 5083163 1 environmental_Halophage(100.0%) NA NA
DBSCAN-SWA_304 5088284 : 5098296 7 Bordetella_phage(25.0%) NA NA
DBSCAN-SWA_305 5102181 : 5110992 12 Sodalis_phage(25.0%) integrase attL 5103183:5103196|attR 5112449:5112462
DBSCAN-SWA_306 5114334 : 5118897 7 Xanthomonas_phage(25.0%) NA NA
DBSCAN-SWA_307 5130828 : 5141556 9 Synechococcus_phage(20.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP027590
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 10713 12 Escherichia_phage(63.64%) holin,tail NA
DBSCAN-SWA_2 14125 : 78140 79 Escherichia_phage(69.74%) integrase attL 39850:39867|attR 77223:77240
DBSCAN-SWA_3 83274 : 91376 8 Escherichia_phage(50.0%) head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage