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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP027386 Escherichia coli strain 2014C-3057 plasmid unnamed 0 crisprs NA 0 0 0 0
NZ_CP027387 Escherichia coli strain 2014C-3057 chromosome, complete genome 7 crisprs DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,PrimPol 1 11 20 1

Results visualization

1. NZ_CP027387
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027387_1 283510-283654 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027387_2 1347776-1347925 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027387_3 2683871-2683988 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027387_4 3069262-3069839 Orphan I-E
9 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027387_5 3095541-3095996 TypeI-E I-E
7 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027387_6 4497503-4497626 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP027387_7 5545403-5545494 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP027387.1 1347732-1347777 2 0.957

1. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to position: 1347732-1347777, mismatch: 2, identity: 0.957

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
aatgctgttattgtcggatgcggcatgaacgccttatccgacctac	Protospacer
************************.***.*****************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP027387_7 7.1|5545429|40|NZ_CP027387|CRISPRCasFinder 5545429-5545468 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_CP027387_6 6.1|4497546|38|NZ_CP027387|CRISPRCasFinder 4497546-4497583 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP027387_5 5.7|3095936|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT 3095936-3095967 32 NZ_CP050442 Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence 41503-41534 6 0.812
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP019906 Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence 9269-9314 7 0.848
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 61980-62025 7 0.848
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 170867-170912 7 0.848
NZ_CP027387_4 4.9|3069779|32|NZ_CP027387|CRISPRCasFinder,CRT 3069779-3069810 32 KR080197 Mycobacterium phage FlagStaff, complete genome 15476-15507 7 0.781
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 14045-14090 8 0.826
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 210111-210156 8 0.826
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 216136-216181 8 0.826
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 226630-226675 8 0.826
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 217464-217509 8 0.826
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 198419-198464 8 0.826
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NC_012852 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence 256608-256639 8 0.75
NZ_CP027387_4 4.8|3069718|32|NZ_CP027387|CRISPRCasFinder,CRT 3069718-3069749 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
NZ_CP027387_4 4.9|3069779|32|NZ_CP027387|CRISPRCasFinder,CRT 3069779-3069810 32 NZ_CP014600 Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence 15418-15449 8 0.75
NZ_CP027387_5 5.3|3095692|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT 3095692-3095723 32 NZ_CP030355 Novosphingobium sp. P6W plasmid pP6W2, complete sequence 141173-141204 8 0.75
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP050094 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence 196778-196809 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP050101 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence 151768-151799 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP050106 Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence 508685-508716 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP025016 Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence 133778-133809 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NC_008379 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence 180274-180305 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP053442 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence 151061-151092 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP018233 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence 21422-21453 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP025506 Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence 499023-499054 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP016293 Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence 106143-106174 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP050111 Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence 508869-508900 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP048283 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence 130036-130067 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP030763 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence 172635-172666 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP022668 Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence 387130-387161 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP022569 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK05, complete sequence 4795-4826 9 0.719
NZ_CP027387_4 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT 3069291-3069322 32 NZ_CP050088 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence 158950-158981 9 0.719
NZ_CP027387_4 4.6|3069596|32|NZ_CP027387|CRISPRCasFinder,CRT 3069596-3069627 32 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 224876-224907 9 0.719
NZ_CP027387_4 4.9|3069779|32|NZ_CP027387|CRISPRCasFinder,CRT 3069779-3069810 32 NZ_CP009292 Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence 139210-139241 9 0.719
NZ_CP027387_5 5.2|3095631|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT 3095631-3095662 32 NC_010553 Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence 292180-292211 9 0.719
NZ_CP027387_5 5.2|3095631|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT 3095631-3095662 32 NZ_CP020740 [Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence 20747-20778 9 0.719
NZ_CP027387_5 5.5|3095814|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT 3095814-3095845 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 32377-32408 9 0.719
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 24-69 10 0.783
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24901-24946 10 0.783
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208940-208985 10 0.783
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219434-219479 10 0.783
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210268-210313 10 0.783
NZ_CP027387_2 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder 1347828-1347873 46 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191223-191268 10 0.783
NZ_CP027387_4 4.9|3069779|32|NZ_CP027387|CRISPRCasFinder,CRT 3069779-3069810 32 NZ_CP012383 Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence 14130-14161 10 0.688
NZ_CP027387_5 5.3|3095692|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT 3095692-3095723 32 MF417892 Uncultured Caudovirales phage clone 2F_2, partial genome 39822-39853 10 0.688

1. spacer 7.1|5545429|40|NZ_CP027387|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 6.1|4497546|38|NZ_CP027387|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 5.7|3095936|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050442 (Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

cggctatggaatttatggagaagtttggtttt	CRISPR spacer
ctcctatggaatttatgcagaagtttagtaat	Protospacer
*  ************** ********.**  *

4. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP019906 (Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.848

----aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
gccggatgtt----ttgtcggatgcggcgtgaacgccttatccgacctac	Protospacer
    .***.*    ******************.*****************

5. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.848

----aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
gccgaataccg----tgtcggatgcggcgtgaacgccttatccgacctac	Protospacer
    ***.*.*    *****************.*****************

6. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.848

----aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
ttagtatgc----actgtcggatgcggcgtgaacgccttatccgacctac	Protospacer
     ****    *.*****************.*****************

7. spacer 4.9|3069779|32|NZ_CP027387|CRISPRCasFinder,CRT matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 7, identity: 0.781

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gacgccggcgccgcgatgccgttcgccgggtt	Protospacer
******* ******** ******. * . ***

8. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 8, identity: 0.826

--aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
ccagcatggt--ttgtcggatgcggcgtgaacgccttatccgacctac	Protospacer
  *.... **  ******************.*****************

9. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.826

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
tcttgtgcaaatgtcggatgcggcgtgaacgccttatccgacctac	Protospacer
  *  **. * *****************.*****************

10. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.826

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
taagcaatcaatgtcggatgcggcgcgagcgccttatccgaccaac	Protospacer
 * ** .*.* **************.***************** **

11. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.826

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
taagcaatcaatgtcggatgcggcgcgagcgccttatccgaccaac	Protospacer
 * ** .*.* **************.***************** **

12. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.826

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
taagcaatcaatgtcggatgcggcgcgagcgccttatccgaccaac	Protospacer
 * ** .*.* **************.***************** **

13. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.826

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
taagcaatcaatgtcggatgcggcgcgagcgccttatccgaccaac	Protospacer
 * ** .*.* **************.***************** **

14. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NC_012852 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence) position: , mismatch: 8, identity: 0.75

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcacc	Protospacer
**...*********** *** *******.* .

15. spacer 4.8|3069718|32|NZ_CP027387|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **  

16. spacer 4.9|3069779|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gtcgccgccgccgcgcagccctttccacagcc	Protospacer
* ************* **** *****.  *..

17. spacer 5.3|3095692|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030355 (Novosphingobium sp. P6W plasmid pP6W2, complete sequence) position: , mismatch: 8, identity: 0.75

gaaactgaatcatcattgattacccgcgaaga	CRISPR spacer
aattcacgatcatctttgattatccgcgaaga	Protospacer
.*  *  .****** *******.*********

18. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP050094 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

19. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP050101 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

20. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

21. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP025016 (Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

22. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NC_008379 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

23. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

24. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP018233 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

25. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

26. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP016293 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

27. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

28. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP048283 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

29. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

30. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

31. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP022569 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK05, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

32. spacer 4.1|3069291|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 9, identity: 0.719

atctcctcatcctcccagctaccgacagtagt	CRISPR spacer
attctctcatcctccccgctcccgacagcgcc	Protospacer
**...*********** *** *******.. .

33. spacer 4.6|3069596|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taaggccgtcgccggatcagcctggctatgcc	CRISPR spacer
cggggccgtcgccggatcagccggtctgctgc	Protospacer
...******************* * **..  *

34. spacer 4.9|3069779|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gaagccgccgccgcgaacccgtttttcccggg	Protospacer
** ************** ******..  .*  

35. spacer 5.2|3095631|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaggccgcagaacgccgtgatattgcgttc	CRISPR spacer
gcggcgccgaaaaacgccgtgatattgccgat	Protospacer
 **. **** *.****************   .

36. spacer 5.2|3095631|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaggccgcagaacgccgtgatattgcgttc	CRISPR spacer
gcggcgccgaagaacgccgtgatgttgccggt	Protospacer
 **. **** *************.****   .

37. spacer 5.5|3095814|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

atcaggtaatcgagacacctgtcagcactctc	CRISPR spacer
ccaaggtaatcgagagacctgccagcaaagcc	Protospacer
 . ************ *****.*****   .*

38. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 10, identity: 0.783

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
tcggcgcacggtgtcggatgcggcgcgagcgccttatccgacctac	Protospacer
   **   .. **************.********************

39. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.783

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
tcaggcattgatgtcggatgcggcgtaaacgccttatccgacctac	Protospacer
   * ..**. ***************.*.*****************

40. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.783

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
tctgagcatggtgtcggatgcgacgcgagcgccttatccgacctac	Protospacer
  **    *. ***********.**.********************

41. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.783

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
tctgagcatggtgtcggatgcgacgcgagcgccttatccgacctac	Protospacer
  **    *. ***********.**.********************

42. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.783

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
tctgagcatggtgtcggatgcgacgcgagcgccttatccgacctac	Protospacer
  **    *. ***********.**.********************

43. spacer 2.1|1347828|46|NZ_CP027387|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.783

aatgctgttattgtcggatgcggcgtgagcgccttatccgacctac	CRISPR spacer
tctgagcatggtgtcggatgcgacgcgagcgccttatccgacctac	Protospacer
  **    *. ***********.**.********************

44. spacer 4.9|3069779|32|NZ_CP027387|CRISPRCasFinder,CRT matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
ttgcccgccgcggcgaagccgcttccgtcctc	Protospacer
    ******* *********.***** . *.

45. spacer 5.3|3095692|32|NZ_CP027387|PILER-CR,CRISPRCasFinder,CRT matches to MF417892 (Uncultured Caudovirales phage clone 2F_2, partial genome) position: , mismatch: 10, identity: 0.688

gaaactgaatcatcattgattacccgcgaaga	CRISPR spacer
tgggctgcatcatcattgattacctgcaactg	Protospacer
 ...*** ****************.**.*  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 196859 : 282026 99 Enterobacteria_phage(50.0%) protease,tail,terminase,portal,holin,lysis,integrase,head,transposase attL 197985:198019|attR 283460:283494
DBSCAN-SWA_2 501548 : 560200 71 Enterobacteria_phage(59.65%) protease,tail,portal,terminase,lysis,transposase,integrase,head,capsid attL 510029:510075|attR 560214:560260
DBSCAN-SWA_3 856762 : 873232 18 Sodalis_phage(14.29%) integrase attL 848970:848983|attR 876243:876256
DBSCAN-SWA_4 1310710 : 1362714 44 Stx2-converting_phage(37.5%) transposase,tRNA,integrase attL 1321764:1321779|attR 1353904:1353919
DBSCAN-SWA_5 1422029 : 1480324 57 Vibrio_phage(15.38%) protease,transposase,integrase,tRNA attL 1447532:1447546|attR 1479593:1479607
DBSCAN-SWA_6 1899623 : 1912956 15 Enterobacteria_phage(66.67%) transposase,integrase attL 1899441:1899463|attR 1913441:1913463
DBSCAN-SWA_7 3192281 : 3297298 104 Stx2-converting_phage(35.29%) tail,terminase,holin,integrase,head,capsid,tRNA attL 3196003:3196017|attR 3208060:3208074
DBSCAN-SWA_8 3540875 : 3595097 68 Enterobacteria_phage(47.62%) portal,terminase,holin,lysis,integrase,head,transposase attL 3552083:3552098|attR 3594014:3594029
DBSCAN-SWA_9 3696090 : 3809867 118 Enterobacteria_phage(35.71%) protease,tail,terminase,portal,holin,lysis,integrase,head,transposase attL 3705081:3705099|attR 3779316:3779334
DBSCAN-SWA_10 3888577 : 3898505 9 Enterobacteria_phage(62.5%) transposase NA
DBSCAN-SWA_11 3989947 : 3996249 6 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_12 4029884 : 4038913 11 Stx2-converting_phage(42.86%) transposase NA
DBSCAN-SWA_13 4156191 : 4192353 46 Enterobacteria_phage(87.18%) tail,terminase,portal,holin,plate,integrase,head,capsid attL 4155129:4155188|attR 4192460:4192580
DBSCAN-SWA_14 4276387 : 4360520 98 Escherichia_phage(31.25%) protease,tail,terminase,portal,holin,lysis,transposase,integrase,head,capsid,tRNA attL 4268658:4268672|attR 4289411:4289425
DBSCAN-SWA_15 4526843 : 4702577 202 Enterobacteria_phage(38.6%) protease,tail,portal,terminase,holin,lysis,transposase,integrase,head,capsid,tRNA attL 4652007:4652066|attR 4675526:4676791
DBSCAN-SWA_16 4905498 : 4961685 69 Escherichia_phage(44.78%) tail,terminase,portal,holin,lysis,transposase,integrase,head,capsid,tRNA attL 4946550:4946565|attR 4962037:4962052
DBSCAN-SWA_17 5064635 : 5076771 15 Escherichia_phage(41.67%) holin,tail NA
DBSCAN-SWA_18 5189445 : 5343627 189 Stx2-converting_phage(30.0%) protease,tail,terminase,holin,transposase,integrase,head,capsid,tRNA attL 5197736:5197750|attR 5344052:5344066
DBSCAN-SWA_19 5487272 : 5590814 114 Escherichia_phage(32.88%) protease,tail,terminase,capsid,holin,integrase,head,transposase attL 5501740:5501757|attR 5560265:5560282
DBSCAN-SWA_20 5595929 : 5644441 60 Enterobacteria_phage(38.3%) protease,tail,portal,terminase,holin,transposase,integrase,head,capsid attL 5592272:5592290|attR 5641356:5641374
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP027387.1|WP_000555341.1|1326074_1326332_+|hypothetical-protein 1326074_1326332_+ 85 aa aa NA NA NA 1310710-1362714 yes