CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027447	Escherichia coli strain 2014C-3075 chromosome, complete genome	3 crisprs	cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	0	9	11	0
NZ_CP027448	Escherichia coli strain 2014C-3075 plasmid unnamed, complete sequence	0 crisprs	WYL	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027447_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027447_1

2336395-2337094

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT

11 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP027447_1

>merge|NZ_CP027447|1|2336395-2337094|PILER-CR,CRISPRCasFinder,CRT
CGGTTTATCCCCGCTGGCGCGGGGAACACTTGCAGTAGCACTTCAGTTCTGTTTTTGTCACCGGTTTATCCCCGCTGGCGCGGGGAACACGCCTGATAGCGCCTCCAGCCTTCGCCCTGGTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGCATAGCTTTGGCTTCTTCTTTAACGGACGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGTACCACTGTTTTTTCTTCGGTGCCCAGCCACGGTTTATCCCCGCTGGCGCGGGGAACACGTTTACATATTTATACCTACACGCTCAATCGACGGTTTATCCCCGCTGGCGCGGGGAACACCCGTTTTCGATTGAACAGAAAGATTTCAACACCGGTTTATCCCCGCTGGCGCGGGGAACACAATACAGACCCGTTGTACGGTTTTTGCGAGCACGGTTTATCCCCGCTGGCGCGGGGAACACTTGGAAATCACCTCCCCGATCTCCGCGCTGTCCGGTTTATCCCCGCTGGCGCGGGGAACACCCCTCGGCAAAAATGCCTTTTTCCTCGTCGGTCGGTTTATCCCCGCTGGCGCGGGGAACACCACGGGCCAGACGGTAGCAACAATTTTACGGCCGGTTTATCCCCGCTGGCGCGGGGAACACCAAAACGGAAGTGCCAGTATTGCCAGAATCACCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP027447|1|1|2336395-2337094|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCAGTAGCACTTCAGTTCTGTTTTTGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTGATAGCGCCTCCAGCCTTCGCCCTGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCATAGCTTTGGCTTCTTCTTTAACGGACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTACCACTGTTTTTTCTTCGGTGCCCAGCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTACATATTTATACCTACACGCTCAATCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGTTTTCGATTGAACAGAAAGATTTCAACAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATACAGACCCGTTGTACGGTTTTTGCGAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGAAATCACCTCCCCGATCTCCGCGCTGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCTCGGCAAAAATGCCTTTTTCCTCGTCGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACGGGCCAGACGGTAGCAACAATTTTACGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAACGGAAGTGCCAGTATTGCCAGAATCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP027447|1|1|2336395-2337094|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCAGTAGCACTTCAGTTCTGTTTTTGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTGATAGCGCCTCCAGCCTTCGCCCTGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCATAGCTTTGGCTTCTTCTTTAACGGACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTACCACTGTTTTTTCTTCGGTGCCCAGCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTACATATTTATACCTACACGCTCAATCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGTTTTCGATTGAACAGAAAGATTTCAACAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATACAGACCCGTTGTACGGTTTTTGCGAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGAAATCACCTCCCCGATCTCCGCGCTGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCTCGGCAAAAATGCCTTTTTCCTCGTCGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACGGGCCAGACGGTAGCAACAATTTTACGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAACGGAAGTGCCAGTATTGCCAGAATCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP027447|1|1|2336395-2337094|CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCAGTAGCACTTCAGTTCTGTTTTTGTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTGATAGCGCCTCCAGCCTTCGCCCTGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCATAGCTTTGGCTTCTTCTTTAACGGACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTACCACTGTTTTTTCTTCGGTGCCCAGCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTACATATTTATACCTACACGCTCAATCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGTTTTCGATTGAACAGAAAGATTTCAACAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATACAGACCCGTTGTACGGTTTTTGCGAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGAAATCACCTCCCCGATCTCCGCGCTGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCTCGGCAAAAATGCCTTTTTCCTCGTCGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACGGGCCAGACGGTAGCAACAATTTTACGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAACGGAAGTGCCAGTATTGCCAGAATCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027447.1\|WP_000372392.1\|2334114_2335023_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP027447.1\|WP_096986963.1\|2340859_2341396_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP027447.1\|WP_000956460.1\|2345938_2346091_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP027447.1\|WP_096944385.1\|2339789_2340845_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP027447.1\|WP_000517476.1\|2331202_2331514_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP027447.1\|WP_096986972.1\|2341392_2342955_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP027447.1\|WP_001295182.1\|2328206_2328968_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP027447.1\|WP_000039841.1\|2346355_2347090_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP027447.1\|WP_096986965.1\|2332685_2334113_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP027447.1\|WP_001571785.1\|2339032_2339779_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP027447.1\|WP_096986962.1\|2343044_2345744_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP027447.1\|WP_000063171.1\|2337190_2337484_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP027447.1\|WP_096986964.1\|2337480_2338404_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP027447.1\|WP_075861751.1\|2328948_2329998_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP027447.1\|WP_001173653.1\|2332080_2332686_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP027447.1\|WP_096944381.1\|2335275_2336313_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP027447.1\|WP_000281458.1\|2338400_2339051_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP027447.1\|WP_001246104.1\|2331707_2332031_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP027447.1\|WP_000246132.1\|2330473_2331184_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP027447.1\|WP_001219242.1\|2329994_2330474_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851

Protein	Function_ID	Function_description	E-value
NZ_CP027447.1\|WP_000372392.1\|2334114_2335023_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP027447.1\|WP_096986963.1\|2340859_2341396_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.6072e-28
NZ_CP027447.1\|WP_000956460.1\|2345938_2346091_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	4.96653e-13
NZ_CP027447.1\|WP_096944385.1\|2339789_2340845_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.85769e-155
NZ_CP027447.1\|WP_000517476.1\|2331202_2331514_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP027447.1\|WP_096986972.1\|2341392_2342955_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP027447.1\|WP_001295182.1\|2328206_2328968_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP027447.1\|WP_000039841.1\|2346355_2347090_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.50395e-137
NZ_CP027447.1\|WP_096986965.1\|2332685_2334113_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP027447.1\|WP_001571785.1\|2339032_2339779_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.9503e-47
NZ_CP027447.1\|WP_096986962.1\|2343044_2345744_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.48961e-179
NZ_CP027447.1\|WP_000063171.1\|2337190_2337484_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	3.83858e-65
NZ_CP027447.1\|WP_096986964.1\|2337480_2338404_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.72082e-156
NZ_CP027447.1\|WP_075861751.1\|2328948_2329998_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP027447.1\|WP_001173653.1\|2332080_2332686_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.12214e-148
NZ_CP027447.1\|WP_096944381.1\|2335275_2336313_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP027447.1\|WP_000281458.1\|2338400_2339051_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	7.18376e-91
NZ_CP027447.1\|WP_001246104.1\|2331707_2332031_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP027447.1\|WP_000246132.1\|2330473_2331184_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.20774e-121
NZ_CP027447.1\|WP_001219242.1\|2329994_2330474_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104

>NZ_CP027447.1|WP_096944381.1|2335275_2336313_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDSEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP027447.1|WP_000372392.1|2334114_2335023_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP027447.1|WP_096986965.1|2332685_2334113_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSQFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP027447.1|WP_001173653.1|2332080_2332686_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTPQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP027447.1|WP_001246104.1|2331707_2332031_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP027447.1|WP_000517476.1|2331202_2331514_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP027447.1|WP_000246132.1|2330473_2331184_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKHVVIAISPGDSRFAQLPLANHPQITVVDGGEERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP027447.1|WP_001219242.1|2329994_2330474_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP027447.1|WP_075861751.1|2328948_2329998_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHSREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQCRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP027447.1|WP_001295182.1|2328206_2328968_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP027447.1|WP_000063171.1|2337190_2337484_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP027447.1|WP_096986964.1|2337480_2338404_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQVDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLVATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDLVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPELLGDSGHRGRSG
>NZ_CP027447.1|WP_000281458.1|2338400_2339051_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFAPELHTGQSLCFNLRANPTVCKAGKRHDLLMEAKRQVRGQAEGRNVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP027447.1|WP_001571785.1|2339032_2339779_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTECLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQEGLRHPAFPLYLGRKSHPLALPLAPLLLEGNASDALRNAYQQYQDRFHELKVSLPKLQDECWWEGEHDGLVSSKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
>NZ_CP027447.1|WP_096944385.1|2339789_2340845_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTLRAFTEAAFKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP027447.1|WP_096986963.1|2340859_2341396_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWLEELQEKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIESQEWRFTALALVAAVAANVKAIDERQPFAAQLAAVMSEGRFTRLSAVKTPDDLLRQLRRAVKLLNGSVNLISLADDIFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQN
>NZ_CP027447.1|WP_096986972.1|2341392_2342955_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLASVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALLSLEHAFQFGPDSSSFMQDFEALTGDKVPVASLLPEIPGFQTTKFNKDHFIKRGVTEYLCPHCLALALFSLQLNAPAGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWLNVMPQDEADLPLPKKFDDLIFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICDEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQEPDELLSKWQKEMWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP027447.1|WP_096986962.1|2343044_2345744_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKEGGDDYHLLCWHSLDVAAMGYLMVKSNCFGLADYFRQLGFADTELAAQFFAWLLCWHDIGKFARSFQQLYLHPQLKVPEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLKRVMEMWMPMTTGHHGRPPERMDELDNFLPEDKGAARDFLLAIKVLFPLIEIPTFWDDDEGVELIKQLSWYISATVVLADWTGSSTRYFPRVAQTMDIEDYWQKTLVQAQNALTVFPPKAESAPFTGINTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTCSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGIEGQQEAPFLEKDDYPWLTHVTKSDVHSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIQVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKEDCSQRAGKVLICTQVLEQSVDCDLDEMISDFAPVDLLIQRAGRLQRHIRDMNGQLKRDGKDERHPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCVEQRHDPEMANVILVTDDESCGYSATEGLIGKVG
>NZ_CP027447.1|WP_000956460.1|2345938_2346091_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP027447.1|WP_000039841.1|2346355_2347090_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP027447_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027447_2

2362787-2363064

Unclear

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGACGTGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGNCGNGGGGAACTC	CRT
GACGGTTTATCCCCGCTGACGTGGGGAACTCGCTAA	PILER-CR

4 spacers

The CRISPR arrays of NZ_CP027447_2

>merge|NZ_CP027447|2|2362787-2363064|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGTGCGGGGAACTCTTGGCATAGGCGCTATAGCGGCGCTCTGTGTCCGGTTTATCCCCGCTGGCACGGGGAACTCGTTGGTGCCGTTGTTGTAACCGTAGAAACCGACGGTTTATCCCCGCTGACGTGGGGAACTCGCAGGTCAACACGGGCGATAAACCCGGCTGACCGGTTTATCCCCGCTGACGTGGGGAACTCGATAAGCAGATTGCAGAACTACAGGCGAAGGACGGTTTATCCCCGCTGACGTGGGGAACTCTCTAA

>NZ_CP027447|2|2|2362787-2363059|CRISPRCasFinder
TGGTTTATCCCCGCTGGTGCGGGGAACTC	TTGGCATAGGCGCTATAGCGGCGCTCTGTGTC
CGGTTTATCCCCGCTGGCACGGGGAACTC	GTTGGTGCCGTTGTTGTAACCGTAGAAACCGA
CGGTTTATCCCCGCTGACGTGGGGAACTC	GCAGGTCAACACGGGCGATAAACCCGGCTGAC
CGGTTTATCCCCGCTGACGTGGGGAACTC	GATAAGCAGATTGCAGAACTACAGGCGAAGGA
CGGTTTATCCCCGCTGACGTGGGGAACTC

>NZ_CP027447|2|2|2362787-2363059|CRT
TGGTTTATCCCCGCTGGTGCGGGGAACTC	TTGGCATAGGCGCTATAGCGGCGCTCTGTGTC
CGGTTTATCCCCGCTGGCACGGGGAACTC	GTTGGTGCCGTTGTTGTAACCGTAGAAACCGA
CGGTTTATCCCCGCTGACGTGGGGAACTC	GCAGGTCAACACGGGCGATAAACCCGGCTGAC
CGGTTTATCCCCGCTGACGTGGGGAACTC	GATAAGCAGATTGCAGAACTACAGGCGAAGGA
CGGTTTATCCCCGCTGACGTGGGGAACTC

>NZ_CP027447|2|2|2362907-2363064|PILER-CR
GACGGTTTATCCCCGCTGACGTGGGGAACTCGCAGG	TCAACACGGGCGATAAACCCGGCTGACC
GGTTTATCCCCGCTGACGTGGGGAACTCGATAAGCA	GATTGCAGAACTACAGGCGAAGGAC
GGTTTATCCCCGCTGACGTGGGGAACTCTCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027447.1\|WP_096987122.1\|2366919_2367792_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP027447.1\|WP_096987238.1\|2353695_2354556_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP027447.1\|WP_075861760.1\|2360670_2362149_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP027447.1\|WP_096987237.1\|2354552_2355332_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP027447.1\|WP_096987121.1\|2365765_2366914_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP027447.1\|WP_000036723.1\|2367851_2369150_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP027447.1\|WP_001243483.1\|2364857_2365751_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP027447.1\|WP_000254750.1\|2371964_2372300_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP027447.1\|WP_096987234.1\|2359366_2360644_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP027447.1\|WP_000210878.1\|2369236_2370874_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP027447.1\|WP_096987241.1\|2351433_2352705_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP027447.1\|WP_096987120.1\|2363397_2364069_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP027447.1\|WP_001071643.1\|2371101_2371893_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP027447.1\|WP_096987239.1\|2352972_2353548_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP027447.1\|WP_097291273.1\|2356740_2358195_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP027447.1\|WP_000581937.1\|2372299_2372548_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP027447.1\|WP_000944228.1\|2364241_2364844_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NZ_CP027447.1\|WP_000021342.1\|2358264_2359050_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP027447.1\|WP_096987236.1\|2355309_2356647_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP027447.1\|WP_077516542.1\|2352695_2352956_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289

Protein	Function_ID	Function_description	E-value
NZ_CP027447.1\|WP_096987122.1\|2366919_2367792_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	4.22429e-101
NZ_CP027447.1\|WP_096987238.1\|2353695_2354556_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	5.91318e-87
NZ_CP027447.1\|WP_075861760.1\|2360670_2362149_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	2.55348e-108
NZ_CP027447.1\|WP_096987237.1\|2354552_2355332_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	7.75536e-62
NZ_CP027447.1\|WP_096987121.1\|2365765_2366914_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.38571e-60
NZ_CP027447.1\|WP_000036723.1\|2367851_2369150_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP027447.1\|WP_001243483.1\|2364857_2365751_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	2.03579e-91
NZ_CP027447.1\|WP_000254750.1\|2371964_2372300_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.22533e-74
NZ_CP027447.1\|WP_096987234.1\|2359366_2360644_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	5.40012e-29
NZ_CP027447.1\|WP_000210878.1\|2369236_2370874_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP027447.1\|WP_096987241.1\|2351433_2352705_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	6.76838e-125
NZ_CP027447.1\|WP_096987120.1\|2363397_2364069_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.17826e-154
NZ_CP027447.1\|WP_001071643.1\|2371101_2371893_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	9.36315e-160
NZ_CP027447.1\|WP_096987239.1\|2352972_2353548_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	2.35235e-88
NZ_CP027447.1\|WP_097291273.1\|2356740_2358195_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.06662e-80
NZ_CP027447.1\|WP_000581937.1\|2372299_2372548_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP027447.1\|WP_000944228.1\|2364241_2364844_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	6.05718e-77
NZ_CP027447.1\|WP_000021342.1\|2358264_2359050_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	8.62537e-140
NZ_CP027447.1\|WP_096987236.1\|2355309_2356647_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.33614e-49
NZ_CP027447.1\|WP_077516542.1\|2352695_2352956_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	7.56514e-41

>NZ_CP027447.1|WP_075861760.1|2360670_2362149_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKTWAWSEDTAVMEKFNIPRQMLFDVQMPGTVLGHITRQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNEDSIQSWSNA
>NZ_CP027447.1|WP_096987234.1|2359366_2360644_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRNTNNKEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGYWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP027447.1|WP_000021342.1|2358264_2359050_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANVFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP027447.1|WP_097291273.1|2356740_2358195_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPASVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENTLREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNHLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFAHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP027447.1|WP_096987236.1|2355309_2356647_-|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFMLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLMRQGRFAEAHAIVHRYLGPHVLLGDEVAAATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMPVTLLLLAAVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP027447.1|WP_096987237.1|2354552_2355332_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQVAAQGNCGPDVSLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEDAVLLETVADLRFAPEFVARHIAEWQRQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTENGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAESPAMLCLQLARAEQQRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP027447.1|WP_096987238.1|2353695_2354556_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASCLAEQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDISTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAVKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVCNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP027447.1|WP_096987239.1|2352972_2353548_+|glycerol-3-phosphate-responsive-antiterminator
MSLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISQIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP027447.1|WP_077516542.1|2352695_2352956_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTVQRLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDEKTLQQWRYPPSGFGITYRFG
>NZ_CP027447.1|WP_096987241.1|2351433_2352705_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTQALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLARFKTHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPVPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL
>NZ_CP027447.1|WP_096987120.1|2363397_2364069_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDQLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA
>NZ_CP027447.1|WP_000944228.1|2364241_2364844_+|LemA-family-protein
MLRIFIVIIFIVNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSSHEQEVLEAVTLARSQANRASSDLQQAPGDAQKLQAWQQAQAQVSRTLGQLTIISERYPELKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPDDVTAVSKAPTIDFSQNANAH
>NZ_CP027447.1|WP_001243483.1|2364857_2365751_+|YgcG-family-protein
MRNFIFLMAFFCSSVFATQIPVPESPKYVNDLTGTLTNSEVNTLTNQIKALTQKNHAQLVVLVVDTTGDETIEQYATRVFDSWKPGDKDRDDGVLLLVAWQDHTVRIEIGYGLEGIITDAQSGKIIRNSIIPAFKKGDLAGGLQKGINDIESRLTGNNSATITPTDHPLPFSGWWALLVWAIILTFISARGYIKTLGLICFAAIVLAFVLPIAGFSGSWGVLATLLCFATPFLAVAIAFTPFGKKVRDSMRNTNQPSRHTRSNSSSHYSSSSSSSFDNDNFRGGGGSSGGGGASGRW
>NZ_CP027447.1|WP_096987121.1|2365765_2366914_+|YgcG-family-protein
MRIFLLLLMLCGFQVFAEQLPSVTDLTGTLTTEEQTALNQQLQTLEQQNHFQVAVLVTPTTGGKNIKLAASQRYGLYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEQMLPPEQAAQIVRYHMQPEFEKSNLFAGLTGGIESIAQFTHIKANLSPLDALANHLFANPQRSLPCLAWTLLMIVAIVVLWRFTSRPGPGIWMISMITPMVWFFFFQDDVIIRRVSIVCFSLLLATTCWQRLAVVFNMCRAFPMMLAPKNKNTKVKKQKKTQQFPESGRNSLFVVMLIIVVGWCLVFASNKDIAFISTIIGLIDHFIGPITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRSSSKNSFRGGGGSSGGGGSSDRW
>NZ_CP027447.1|WP_096987122.1|2366919_2367792_+|YgcG-family-protein
MRIILFLLTLWCLPVLAQQIAVPELRQQVTDITGTLSTSEQQSLTQQLQDITQKTRAQVAVLIVPSTGDDSIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGNIIRSIMIPAFKKQKLAKGLELAIIALNNQLTSQHQYSSNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGNNFCRAFKSSVCISTVYLIDLFLFSDQTFSIAVFSFFFTFTTIMVFTCLCVLQKKASGRSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
>NZ_CP027447.1|WP_000036723.1|2367851_2369150_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP027447.1|WP_000210878.1|2369236_2370874_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP027447.1|WP_001071643.1|2371101_2371893_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVIDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP027447.1|WP_000254750.1|2371964_2372300_-|endoribonuclease-MazF
MVSRYVPDTGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP027447.1|WP_000581937.1|2372299_2372548_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW

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Crispr_ID: NZ_CP027447_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027447_3

4721630-4721766

Orphan

Consensus_repeat	Method
TGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027447_3

>merge|NZ_CP027447|3|4721630-4721766|CRISPRCasFinder
TGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGTTGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCAAGAATTTGTAGGCCTGATAAGCGTAGCGCATCAGGCA

>NZ_CP027447|3|3|4721630-4721766|CRISPRCasFinder
TGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCA	TTTGTCACCATTGCCGGTTGCGGCGTGAACGCCTTATCCGGCCTACGAG
TGGCGCAAGAATTTGTAGGCCTGATAAGCGTAGCGCATCAGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027447.1\|WP_000662421.1\|4722775_4724158_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|235873
NZ_CP027447.1\|WP_001084388.1\|4715326_4716259_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182237
NZ_CP027447.1\|WP_000661638.1\|4721815_4722766_+\|carbamate-kinase-family-protein	unknown	unknown	gnl\|CDD\|183464
NZ_CP027447.1\|WP_032170760.1\|4716350_4716848_-\|DUF1097-domain-containing-protein	unknown	unknown	gnl\|CDD\|368942
NZ_CP027447.1\|WP_001330069.1\|4730931_4731747_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027447.1\|WP_096986507.1\|4718603_4720151_+\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP027447.1\|WP_001295807.1\|4710571_4711159_-\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NZ_CP027447.1\|WP_000981352.1\|4725116_4726103_+\|autoinducer-2-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380657
NZ_CP027447.1\|WP_016235501.1\|4717105_4717711_+\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_CP027447.1\|WP_000152765.1\|4724455_4724866_+\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|226838
NZ_CP027447.1\|WP_096986508.1\|4720150_4721569_+\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP027447.1\|WP_016235502.1\|4717750_4718614_+\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP027447.1\|WP_096986506.1\|4711287_4713321_+\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NZ_CP027447.1\|WP_000447340.1\|4726151_4727636_+\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP027447.1\|WP_000818902.1\|4727628_4728600_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP027447.1\|WP_000692717.1\|4729639_4730689_+\|NADPH-dependent-aldehyde-reductase-YahK	unknown	unknown	gnl\|CDD\|176186
NZ_CP027447.1\|WP_096986505.1\|4709085_4710558_-\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NZ_CP027447.1\|WP_000290600.1\|4732160_4732406_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027447.1\|WP_000750342.1\|4728596_4729553_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP027447.1\|WP_001305451.1\|4714196_4715285_+\|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL	unknown	unknown	gnl\|CDD\|214491

Protein	Function_ID	Function_description	E-value
NZ_CP027447.1\|WP_000662421.1\|4722775_4724158_+\|amidohydrolase-family-protein	gnl\|CDD\|235873	PRK06846, PRK06846, putative deaminase; Validated.	0
NZ_CP027447.1\|WP_001084388.1\|4715326_4716259_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182237	PRK10094, PRK10094, HTH-type transcriptional activator AllS.	7.71252e-82
NZ_CP027447.1\|WP_000661638.1\|4721815_4722766_+\|carbamate-kinase-family-protein	gnl\|CDD\|183464	PRK12352, PRK12352, putative carbamate kinase; Reviewed.	0
NZ_CP027447.1\|WP_032170760.1\|4716350_4716848_-\|DUF1097-domain-containing-protein	gnl\|CDD\|368942	pfam06496, DUF1097, Protein of unknown function (DUF1097). This family consists of several bacterial putative membrane proteins.	8.21758e-18
NZ_CP027447.1\|WP_096986507.1\|4718603_4720151_+\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	1.03397e-159
NZ_CP027447.1\|WP_001295807.1\|4710571_4711159_-\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	1.41055e-110
NZ_CP027447.1\|WP_000981352.1\|4725116_4726103_+\|autoinducer-2-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380657	cd20002, PBP1_LsrB_Quorum_Sensing-like, ligand-binding protein LsrB-like of ABC transporter periplasmic binding protein. Ligand-binding protein LsrB-like of a transport system, similar to periplasmic binding domain of autoinducer-2 (AI-2) receptor LsrB from Salmonella typhimurium and its close homologs from other bacteria. The members of this group are homologous to a family of periplasmic pentose/hexose sugar-binding proteins that function as the primary receptors for chemotaxis and transporters of many sugar based solutes in bacteria and archaea and that are a member of the type 1 periplasmic binding protein superfamily. LsrB, which is part of the ABC transporter complex LsrABCD, binds a chemically distinct form of the AI-2 signal that lacks boron, in contrast to the Vibrio harveyi AI-2 signaling molecule that has an unusual furanosyl borate diester. Hence, many bacteria coordinate their gene expression according to the local density of their population by producing species specific AI-2. This process of quorum sensing allows LsrB to function as a periplasmic AI-2 binding protein in interspecies signaling.	8.3223e-166
NZ_CP027447.1\|WP_016235501.1\|4717105_4717711_+\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	5.58098e-20
NZ_CP027447.1\|WP_000152765.1\|4724455_4724866_+\|ASCH-domain-containing-protein	gnl\|CDD\|226838	COG4405, COG4405, Uncharacterized protein conserved in bacteria [Function unknown].	3.33306e-63
NZ_CP027447.1\|WP_096986508.1\|4720150_4721569_+\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	3.32415e-114
NZ_CP027447.1\|WP_016235502.1\|4717750_4718614_+\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.88239e-35
NZ_CP027447.1\|WP_096986506.1\|4711287_4713321_+\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP027447.1\|WP_000447340.1\|4726151_4727636_+\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP027447.1\|WP_000818902.1\|4727628_4728600_+\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	2.47581e-72
NZ_CP027447.1\|WP_000692717.1\|4729639_4730689_+\|NADPH-dependent-aldehyde-reductase-YahK	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP027447.1\|WP_096986505.1\|4709085_4710558_-\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NZ_CP027447.1\|WP_000750342.1\|4728596_4729553_+\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	3.39845e-78
NZ_CP027447.1\|WP_001305451.1\|4714196_4715285_+\|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL	gnl\|CDD\|214491	smart00052, EAL, Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.	1.47528e-102

>NZ_CP027447.1|WP_096986508.1|4720150_4721569_+|DUF1116-domain-containing-protein
MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPVTWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNTTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPMLRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV
>NZ_CP027447.1|WP_096986507.1|4718603_4720151_+|acyl-CoA-synthetase-FdrA
MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQAKNGDLMIVINGKAGADNEQLLVEIEELFNTKAQSGSHEARYATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLLMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMFDAIGMLENDPQTEIIVLISKPPAPAVARKVLERARACRKPVVVCFLGRGETPVDEQGLQFARGSKEAALKAVMLSGVKQEHLDLHTLNQPLIADVRARLKPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLKDINRSVKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKANAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA
>NZ_CP027447.1|WP_016235502.1|4717750_4718614_+|DUF2877-domain-containing-protein
MWSLTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFNGLFRHGDKVQFDDQGITVGQHLHIEMSHCQRWLSPTLQMTAVNFHLIVWQQWHDIIHQHLGENETLFNYCGDNPFYQALNKELHIKRRAVIQAVNDKQNIASAVASMMGLGIGLTPSADDYLTGLALILFISGHPAEKYKEEFYLGLQRGRNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS
>NZ_CP027447.1|WP_016235501.1|4717105_4717711_+|ankyrin-repeat-domain-containing-protein
MTIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLTGDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
>NZ_CP027447.1|WP_032170760.1|4716350_4716848_-|DUF1097-domain-containing-protein
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLAVNYSGMVWAFFAALAAGGLASVSGLSGFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKRDGY
>NZ_CP027447.1|WP_001084388.1|4715326_4716259_-|LysR-family-transcriptional-regulator
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFHAIKRSIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMAQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
>NZ_CP027447.1|WP_001305451.1|4714196_4715285_+|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGNNSHKYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVKKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
>NZ_CP027447.1|WP_096986506.1|4711287_4713321_+|choline-BCCT-transporter-BetT
MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIDRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRGAYVELKSLPPEEGQQLGHLDLLVHMGDEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA
>NZ_CP027447.1|WP_001295807.1|4710571_4711159_-|transcriptional-regulator-BetI
MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAELRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPRQQAQEAGYGLAALIDGLWLRAALSGKPLDKPLAHSLTRHFITQHLPTD
>NZ_CP027447.1|WP_096986505.1|4709085_4710558_-|betaine-aldehyde-dehydrogenase
MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLADIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPTKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDSFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNLAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKFQSIF
>NZ_CP027447.1|WP_000661638.1|4721815_4722766_+|carbamate-kinase-family-protein
MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTEAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFGKPQQQVLDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPECLPAALRGETGTHIIKT
>NZ_CP027447.1|WP_000662421.1|4722775_4724158_+|amidohydrolase-family-protein
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAAVSGTTHCDANNTMKITDPHYYLENVLLETGFDYENGVAVQTRTARQTVEIQNGKIVALRENNQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
>NZ_CP027447.1|WP_000152765.1|4724455_4724866_+|ASCH-domain-containing-protein
MTIKEKILQKYPHASFCTFGDSAALADHLATLIATGVKTASCGSLAGCIEDNIFPMIGEYKIVENSRGEPVCVIRVIGLHLLRFSDVTAELARKEGEGDLSLEYWRNEHRRFFQVEGSYSPEMDVIFEEYALIDVV
>NZ_CP027447.1|WP_000981352.1|4725116_4726103_+|autoinducer-2-ABC-transporter-substrate-binding-protein
MMNKRFVINMVSSLLLGAALISAPLQAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVNASQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQPSANWDIEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNKVAVYGMMIPSQAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPGLEMENLGKADVDMDKRIIRFHKVLLVNKDNIDSLY
>NZ_CP027447.1|WP_000447340.1|4726151_4727636_+|sugar-ABC-transporter-ATP-binding-protein
METFLSLRHINKTFHATRALRDVSLDFMSGEVHCLAGQNGCGKSTLIKIMSGVYRPDEGAEITLGGKNWSKLTPAASVAQGIQVIYQDLSLFPNLSVWENIAVNHYHHGLFVNRRRLREVAQAAMTSINVTLPLDTLVSELSIARCQLVAICRALAQDARLIVMDEPTASLTHQEVQGLLQVVHQLRERGICVVFVSHRLEEVMEVSDRISVLKDGELVGTFPAAEMTTKQLGFLMTGQEFEYQVRELWQGKSSTPVLEVRNLSRHGEYQNINLRVEAGEVVSIVGLLGAGRTELCLSLFGMTRPDAGEILINGQPVTLHSNQDAIRHGIGYVSEDRMSRGLVMAQSIEDNIISTVFHKVKDRFGFLSEAKVRDLVDRLIKALTIKVSDPHLPVNTLSGGNAQRVSIAKWLAIGPRLLILDSPTVGVDIANKAGIYGIISDLAAHGIAVLMICDEIEEAWYQSHRILVMQKGQITHSFLPDSSSQARIAEVVNG
>NZ_CP027447.1|WP_000818902.1|4727628_4728600_+|ABC-transporter-permease
MAELKKRHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGLFVVLISGGIDISFPAMTIIAQYGMVLLLQKIGGNFAVAFALAGGIGILLGLINALLVNRLRVPSIIITISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIAMITVVLLTAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQSWTVMTVAPDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVSSYWQTLITGIIIVASISATAWSQHQNRSLL
>NZ_CP027447.1|WP_000750342.1|4728596_4729553_+|ABC-transporter-permease
MKKSWRNNVEFYLIGLLVLTVAAFSITMPEIFWSISNFQSVASQMPVLGILALAMAVTMLCGGINLSIIATANACSLVMAWVATQYPPGIATVVATLLAGAGAAVIIGLCNGVLIAGIRVSPILATLGMMTLLKGINILVTGGSAIANYPSWVLWLNHAQWFGIPLPMWLFAAVALGLWILLEKTPLGKSIYLIGSNERATLYSGINTRRVLIWVYVISALLCAVAAFLMMSKLNSAKASYGESYLLVSILAAVLGGVNPDGGSGRIIGMVLALFLLQIIESGFNILGISPYLTMALWGTLLLCFIQARGMLGLDRVV
>NZ_CP027447.1|WP_000692717.1|4729639_4730689_+|NADPH-dependent-aldehyde-reductase-YahK
MKIKAVGAYSAKQPLEPMDITRREPGPHDVKIEIAYCGVCHSDIHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKHAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHDIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD
>NZ_CP027447.1|WP_001330069.1|4730931_4731747_+|hypothetical-protein
MISLKAPHNNLMPYTQQSILNTVKNNQLSEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFRILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLEQFIDSVRTDCKCILLEHHMPLLRLFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVRLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL
>NZ_CP027447.1|WP_000290600.1|4732160_4732406_+|hypothetical-protein
MAVQLFITLLNQIPLLSSLQSETLPLFGYSGRVRAMKKAHTGESGLKWEAKDSSKLIGNKDHALRGLSSPMVGIRQIRLIT

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194277-194325	1	0.98
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204771-204819	1	0.98
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195605-195653	1	0.98
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176560-176608	1	0.98
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194091-194139	2	0.959
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204585-204633	2	0.959
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195419-195467	2	0.959
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176374-176422	2	0.959
NZ_CP027447_2	2.5\|2362943\|28\|NZ_CP027447\|PILER-CR	2362943-2362970	28	NZ_CP016822	Rhodococcus sp. p52 plasmid pDF03, complete sequence	11-38	5	0.821
NZ_CP027447_2	2.5\|2362943\|28\|NZ_CP027447\|PILER-CR	2362943-2362970	28	NZ_CP016822	Rhodococcus sp. p52 plasmid pDF03, complete sequence	82392-82419	5	0.821
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP037738	Citrobacter freundii strain CAV1857 plasmid pCAV1857-47, complete sequence	33747-33778	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP029446	Serratia marcescens strain CAV1761 plasmid pKPC_CAV1761, complete sequence	7338-7369	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP026240	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-1cb6, complete sequence	8113-8144	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP020505	Serratia marcescens strain 95 plasmid unnamed2, complete sequence	8254-8285	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP040892	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_4, complete sequence	40907-40938	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP045218	Pantoea dispersa strain BJQ0007 plasmid unnamed2, complete sequence	34072-34103	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP026204	Escherichia coli strain ECONIH5 plasmid pKPC-bca9, complete sequence	18355-18386	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	MG516910	Escherichia coli plasmid pEc1677, complete sequence	2792-2823	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP011588	Enterobacter asburiae strain CAV1043 plasmid pCAV1043-58, complete sequence	43946-43977	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP026400	Escherichia coli strain ECONIH4 plasmid pECO-5e72, complete sequence	37385-37416	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP026057	Citrobacter freundii strain FDAARGOS_73 plasmid unnamed1, complete sequence	10011-10042	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP022158	Escherichia coli strain ABWA45 plasmid pABWA45_4, complete sequence	45981-46012	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP029429	Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-63, complete sequence	54529-54560	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP011639	Serratia marcescens strain CAV1492 plasmid pKPC_CAV1492, complete sequence	67387-67418	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	CP032293	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 plasmid unnamed2, complete sequence	9399-9430	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP033797	Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed1, complete sequence	3288-3319	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP026020	Klebsiella pneumoniae strain 13190 plasmid p13190-3, complete sequence	30799-30830	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NC_019899	Klebsiella pneumoniae strain BK31567 plasmid pBK31567, complete sequence	45616-45647	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP032355	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_KPC, complete sequence	39332-39363	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_MF344555	Klebsiella pneumoniae strain strain 13190 plasmid p13190-KPC, complete sequence	39940-39971	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_MF062700	Enterobacter cloacae strain T5282 plasmid pT5282-CTXM, complete sequence	58272-58303	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_MF344556	Enterobacter cloacae strain 30860 plasmid p30860-NR, complete sequence	42187-42218	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP029439	Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-56, complete sequence	9005-9036	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	12115-12146	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	14484-14515	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	43103-43134	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	MK264769	Klebsiella pneumoniae strain B11 plasmid pKPB11, complete sequence	11201-11232	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP014069	Citrobacter amalonaticus strain FDAARGOS_165 plasmid unnamed	17471-17502	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP017584	Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ03, complete sequence	12984-13015	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	KR822247	Escherichia coli strain E0083033-2 plasmid pEc2A, complete sequence	73821-73852	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	14650-14681	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP041251	Raoultella electrica strain DSM 102253 plasmid unnamed4, complete sequence	33793-33824	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NC_019083	Escherichia coli plasmid pEC14_35, complete sequence	32836-32867	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP032305	Salmonella enterica subsp. enterica serovar Braenderup strain FORC93 plasmid unnamed1, complete sequence	21440-21471	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP043513	Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed2, complete sequence	32253-32284	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP045062	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p3, complete sequence	39190-39221	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	26119-26150	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP045055	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p3, complete sequence	39191-39222	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	14651-14682	7	0.781
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	MK448862	Streptococcus phage Javan178, complete genome	22415-22446	7	0.781
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	304275-304306	7	0.781
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56036-56084	7	0.857
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1096875-1096906	8	0.75
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NZ_CP017945	Phyllobacterium zundukense strain Tri-48 plasmid unnamed5, complete sequence	48608-48639	8	0.75
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	999161-999192	8	0.75
NZ_CP027447_1	1.8\|2336851\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336851-2336882	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1102938-1102969	8	0.75
NZ_CP027447_2	2.4\|2362999\|32\|NZ_CP027447\|CRISPRCasFinder,CRT	2362999-2363030	32	KT962247	Cellulophaga phage phi17:2_18, complete genome	40910-40941	8	0.75
NZ_CP027447_2	2.4\|2362999\|32\|NZ_CP027447\|CRISPRCasFinder,CRT	2362999-2363030	32	NC_021798	Cellulophaga phage phi17:2, complete genome	40910-40941	8	0.75
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7447-7495	8	0.837
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84271-84319	8	0.837
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	495942-495973	9	0.719
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	485518-485549	9	0.719
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	69902-69933	9	0.719
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	450848-450879	9	0.719
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	495980-496011	9	0.719
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	495979-496010	9	0.719
NZ_CP027447_1	1.2\|2336485\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336485-2336516	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	495971-496002	9	0.719
NZ_CP027447_1	1.4\|2336607\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336607-2336638	32	NZ_CP025992	Lactobacillus plantarum subsp. plantarum strain LB1-2 plasmid pLB1-2A, complete sequence	90011-90042	9	0.719
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	302384-302415	9	0.719
NZ_CP027447_1	1.8\|2336851\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336851-2336882	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	986600-986631	9	0.719
NZ_CP027447_2	2.4\|2362999\|32\|NZ_CP027447\|CRISPRCasFinder,CRT	2362999-2363030	32	NZ_CP046724	Pantoea agglomerans strain ASB05 plasmid pASB05p2, complete sequence	74764-74795	9	0.719
NZ_CP027447_2	2.4\|2362999\|32\|NZ_CP027447\|CRISPRCasFinder,CRT	2362999-2363030	32	NZ_CP016892	Pantoea agglomerans strain C410P1 plasmid unnamed3, complete sequence	76603-76634	9	0.719
NZ_CP027447_2	2.4\|2362999\|32\|NZ_CP027447\|CRISPRCasFinder,CRT	2362999-2363030	32	NZ_CP034471	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_2, complete sequence	1572-1603	9	0.719
NZ_CP027447_2	2.4\|2362999\|32\|NZ_CP027447\|CRISPRCasFinder,CRT	2362999-2363030	32	NZ_CP034150	Pantoea agglomerans strain L15 plasmid pPagL15_2, complete sequence	74716-74747	9	0.719
NZ_CP027447_2	2.4\|2362999\|32\|NZ_CP027447\|CRISPRCasFinder,CRT	2362999-2363030	32	NZ_CP034476	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_2, complete sequence	194235-194266	9	0.719
NZ_CP027447_2	2.4\|2362999\|32\|NZ_CP027447\|CRISPRCasFinder,CRT	2362999-2363030	32	NZ_CP031651	Pantoea agglomerans strain TH81 plasmid unnamed2, complete sequence	172649-172680	9	0.719
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8893-8941	9	0.816
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63894-63942	9	0.816
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33054-33102	9	0.816
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110181-110229	9	0.816
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141021-141069	9	0.816
NZ_CP027447_1	1.10\|2336973\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336973-2337004	32	NZ_CP041349	Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence	118084-118115	10	0.688
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404128-404176	10	0.796
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27999-28047	10	0.796
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6864-6912	10	0.796
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	99-147	10	0.796
NZ_CP027447_1	1.3\|2336546\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336546-2336577	32	NZ_CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	59033-59064	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NZ_CP014052	Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence	106081-106112	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NZ_KP688397	Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence	158081-158112	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NZ_KP791968	Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence	175873-175904	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NZ_CP025539	Vibrio harveyi strain 345 plasmid p345-185, complete sequence	35672-35703	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	MN865127	Vibrio alginolyticus strain C1579 plasmid pC1579, complete sequence	225262-225293	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NC_025127	Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence	134575-134606	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NC_016983	Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence	177971-178002	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	NZ_CP034301	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence	59869-59900	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	KX957970	Vibrio parahaemolyticus plasmid pVPS43, complete sequence	126406-126437	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	KX957971	Vibrio parahaemolyticus plasmid pVPS62, complete sequence	115478-115509	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	KX957972	Vibrio parahaemolyticus plasmid pVPS91, complete sequence	86100-86131	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	KX957968	Vibrio alginolyticus plasmid pVAS19, complete sequence	125471-125502	11	0.656
NZ_CP027447_1	1.6\|2336729\|32\|NZ_CP027447\|PILER-CR,CRISPRCasFinder,CRT	2336729-2336760	32	KX957969	Vibrio alginolyticus plasmid pVAS114, complete sequence	130281-130312	11	0.656
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211725-211773	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211925-211973	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222219-222267	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222419-222467	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213053-213101	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213253-213301	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194008-194056	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194208-194256	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11516-11564	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40376-40424	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82847-82895	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87168-87216	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NC_049343	Escherichia phage 500465-2, complete genome	31792-31840	11	0.776
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	193998-194046	12	0.755
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204492-204540	12	0.755
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195326-195374	12	0.755
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176281-176329	12	0.755
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	158417-158465	12	0.755
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313597-313645	12	0.755
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	MF374379	Escherichia phage DN1, complete genome	31163-31211	12	0.755
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14201-14249	13	0.735
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14110-14158	13	0.735
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51839-51887	13	0.735
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19394-19442	13	0.735
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198904-198952	13	0.735
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40300-40348	13	0.735
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91413-91461	13	0.735
NZ_CP027447_3	3.1\|4721674\|49\|NZ_CP027447\|CRISPRCasFinder	4721674-4721722	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31304-31352	14	0.714

1. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 1, identity: 0.98

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tttgtcaccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
***************** *******************************

2. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 1, identity: 0.98

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tttgtcaccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
***************** *******************************

3. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 1, identity: 0.98

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tttgtcaccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
***************** *******************************

4. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 1, identity: 0.98

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tttgtcaccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
***************** *******************************

5. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 2, identity: 0.959

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tttgtcaccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
***************** ******************************.

6. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 2, identity: 0.959

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tttgtcaccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
***************** ******************************.

7. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 2, identity: 0.959

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tttgtcaccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
***************** ******************************.

8. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 2, identity: 0.959

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tttgtcaccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
***************** ******************************.

9. spacer 2.5|2362943|28|NZ_CP027447|PILER-CR matches to NZ_CP016822 (Rhodococcus sp. p52 plasmid pDF03, complete sequence) position: , mismatch: 5, identity: 0.821

aggtcaacacgggcgataaacccggctg	CRISPR spacer
agtcgagcacgggcgatgaacccggctg	Protospacer
** . *.**********.**********

10. spacer 2.5|2362943|28|NZ_CP027447|PILER-CR matches to NZ_CP016822 (Rhodococcus sp. p52 plasmid pDF03, complete sequence) position: , mismatch: 5, identity: 0.821

aggtcaacacgggcgataaacccggctg	CRISPR spacer
agtcgagcacgggcgatgaacccggctg	Protospacer
** . *.**********.**********

11. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037738 (Citrobacter freundii strain CAV1857 plasmid pCAV1857-47, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

12. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029446 (Serratia marcescens strain CAV1761 plasmid pKPC_CAV1761, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

13. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026240 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-1cb6, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

14. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020505 (Serratia marcescens strain 95 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

15. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040892 (Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_4, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

16. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045218 (Pantoea dispersa strain BJQ0007 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

17. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026204 (Escherichia coli strain ECONIH5 plasmid pKPC-bca9, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

18. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to MG516910 (Escherichia coli plasmid pEc1677, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

19. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011588 (Enterobacter asburiae strain CAV1043 plasmid pCAV1043-58, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

20. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026400 (Escherichia coli strain ECONIH4 plasmid pECO-5e72, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

21. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026057 (Citrobacter freundii strain FDAARGOS_73 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

22. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022158 (Escherichia coli strain ABWA45 plasmid pABWA45_4, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

23. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029429 (Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-63, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

24. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011639 (Serratia marcescens strain CAV1492 plasmid pKPC_CAV1492, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

25. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to CP032293 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

26. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033797 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

27. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026020 (Klebsiella pneumoniae strain 13190 plasmid p13190-3, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

28. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NC_019899 (Klebsiella pneumoniae strain BK31567 plasmid pBK31567, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

29. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032355 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_KPC, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

30. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344555 (Klebsiella pneumoniae strain strain 13190 plasmid p13190-KPC, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

31. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF062700 (Enterobacter cloacae strain T5282 plasmid pT5282-CTXM, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

32. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344556 (Enterobacter cloacae strain 30860 plasmid p30860-NR, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

33. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029439 (Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-56, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgctgcccatttg	Protospacer
*. ****************** ****** ...

34. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

35. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

36. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

37. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to MK264769 (Klebsiella pneumoniae strain B11 plasmid pKPB11, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

38. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014069 (Citrobacter amalonaticus strain FDAARGOS_165 plasmid unnamed) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccattta	Protospacer
*. ****.*************.****** ..*

39. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017584 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ03, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccattta	Protospacer
*. ****.*************.****** ..*

40. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to KR822247 (Escherichia coli strain E0083033-2 plasmid pEc2A, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccattta	Protospacer
*. ****.*************.****** ..*

41. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

42. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041251 (Raoultella electrica strain DSM 102253 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccactgttttttcttcgccgcccattta	Protospacer
*. ****************** .***** ..*

43. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NC_019083 (Escherichia coli plasmid pEC14_35, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

44. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032305 (Salmonella enterica subsp. enterica serovar Braenderup strain FORC93 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccattta	Protospacer
*. ****.*************.****** ..*

45. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043513 (Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccattta	Protospacer
*. ****.*************.****** ..*

46. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045062 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p3, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

47. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

48. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045055 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p3, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

49. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
aaaaccattgttttttcttcgatgcccactta	Protospacer
*. ****.*************.****** ..*

50. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 7, identity: 0.781

agtaccactgttttttcttcggtgcc-cagcca	CRISPR spacer
cctaccactgttgtttcttcggttccgtcgcc-	Protospacer
  ********** ********** ** . ***

51. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 7, identity: 0.781

ccgttttcgattgaacagaaagatt-tcaacac	CRISPR spacer
ccgttttcgattgaaccaaaagatcagcgacg-	Protospacer
**************** .******.  *.**.

52. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 7, identity: 0.857

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ttgagcaccattgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
** . ************ ********.*******************.*.

53. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 8, identity: 0.75

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcaggcc	Protospacer
 **.********* **********  * **.

54. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017945 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
ccgtgatggcgtctccagccttcgcctgggca	Protospacer
 * ****.***.**************. **..

55. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcaggcc	Protospacer
 **.********* **********  * **.

56. spacer 1.8|2336851|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.75

ttggaaatcacctccccgatctccgcgctgtc	CRISPR spacer
aggtccagcacctcgccgatccccgcgctgtc	Protospacer
  *   * ****** ******.**********

57. spacer 2.4|2362999|32|NZ_CP027447|CRISPRCasFinder,CRT matches to KT962247 (Cellulophaga phage phi17:2_18, complete genome) position: , mismatch: 8, identity: 0.75

gataagcagattgcagaactacaggcgaagga	CRISPR spacer
gataagcagattgaagaattacaaaaaacaga	Protospacer
************* ****.****.. .* .**

58. spacer 2.4|2362999|32|NZ_CP027447|CRISPRCasFinder,CRT matches to NC_021798 (Cellulophaga phage phi17:2, complete genome) position: , mismatch: 8, identity: 0.75

gataagcagattgcagaactacaggcgaagga	CRISPR spacer
gataagcagattgaagaattacaaaaaacaga	Protospacer
************* ****.****.. .* .**

59. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.837

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tggtgcacaattgccggatgcggcgtgaacgccttatccggcctacggt	Protospacer
*    *** ******** *****************************.

60. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.837

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tggtgcacaattgccggatgcggcgtgaacgccttatccggcctacggt	Protospacer
*    *** ******** *****************************.

61. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcagacc	Protospacer
 **.********* **********  * *..

62. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcagacc	Protospacer
 **.********* **********  * *..

63. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.719

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcaagcc	Protospacer
 **.********* **********  * .*.

64. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcagacc	Protospacer
 **.********* **********  * *..

65. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcagacc	Protospacer
 **.********* **********  * *..

66. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcagacc	Protospacer
 **.********* **********  * *..

67. spacer 1.2|2336485|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcctgatagcgcctccagccttcgccctggtg	CRISPR spacer
tcccgatagcgccaccagccttcgagcagacc	Protospacer
 **.********* **********  * *..

68. spacer 1.4|2336607|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025992 (Lactobacillus plantarum subsp. plantarum strain LB1-2 plasmid pLB1-2A, complete sequence) position: , mismatch: 9, identity: 0.719

agtaccactgttttttcttcggtgcccagcca	CRISPR spacer
gttaccactgttttttctttgctgccacgaac	Protospacer
. *****************.* ****  *

69. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 9, identity: 0.719

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
catttttcgcttgaacagaaatattttgaatt	Protospacer
*  ****** *********** ****..*  .

70. spacer 1.8|2336851|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.719

ttggaaatc-----acctccccgatctccgcgctgtc	CRISPR spacer
-----ggtcgctcgacctcgccgatctccgctctgtc	Protospacer
     ..**     ***** *********** *****

71. spacer 2.4|2362999|32|NZ_CP027447|CRISPRCasFinder,CRT matches to NZ_CP046724 (Pantoea agglomerans strain ASB05 plasmid pASB05p2, complete sequence) position: , mismatch: 9, identity: 0.719

gataagcagattgcagaactacaggcgaagga	CRISPR spacer
cagcagccgattgcagaactgcaggcgctgcg	Protospacer
 *  *** ************.******  * .

72. spacer 2.4|2362999|32|NZ_CP027447|CRISPRCasFinder,CRT matches to NZ_CP016892 (Pantoea agglomerans strain C410P1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gataagcagattgcagaactacaggcgaagga	CRISPR spacer
cagcagccgattgcagaactgcaggcgctgcg	Protospacer
 *  *** ************.******  * .

73. spacer 2.4|2362999|32|NZ_CP027447|CRISPRCasFinder,CRT matches to NZ_CP034471 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_2, complete sequence) position: , mismatch: 9, identity: 0.719

gataagcagattgcagaactacaggcgaagga	CRISPR spacer
cagcagccgattgcagaactgcaggcgctgcg	Protospacer
 *  *** ************.******  * .

74. spacer 2.4|2362999|32|NZ_CP027447|CRISPRCasFinder,CRT matches to NZ_CP034150 (Pantoea agglomerans strain L15 plasmid pPagL15_2, complete sequence) position: , mismatch: 9, identity: 0.719

gataagcagattgcagaactacaggcgaagga	CRISPR spacer
cagcagccgattgcagaactgcaggcgctgcg	Protospacer
 *  *** ************.******  * .

75. spacer 2.4|2362999|32|NZ_CP027447|CRISPRCasFinder,CRT matches to NZ_CP034476 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_2, complete sequence) position: , mismatch: 9, identity: 0.719

gataagcagattgcagaactacaggcgaagga	CRISPR spacer
cagcagccgattgcagaactgcaggcgctgcg	Protospacer
 *  *** ************.******  * .

76. spacer 2.4|2362999|32|NZ_CP027447|CRISPRCasFinder,CRT matches to NZ_CP031651 (Pantoea agglomerans strain TH81 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gataagcagattgcagaactacaggcgaagga	CRISPR spacer
cagcagccgattgcagaactgcaggcgctgcg	Protospacer
 *  *** ************.******  * .

77. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.816

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
tgggccgcggttgccggatgcggcgtaaacgccttatccggcctacgat	Protospacer
*  *.*.* .******* ********.*********************

78. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.816

tttgtcac-cattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
-ttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 **.* .* . ******* ****************************.*.

79. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.816

-tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ggttaacact-ttgccggatgcggcgtgaacgcctgatccggcctacggt	Protospacer
  **. ***. ******* **************** ************.

80. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.816

tttgtcac-cattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
-ttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 **.* .* . ******* ****************************.*.

81. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.816

-tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ggttaacact-ttgccggatgcggcgtgaacgcctgatccggcctacggt	Protospacer
  **. ***. ******* **************** ************.

82. spacer 1.10|2336973|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

cacgggccagacggtagcaacaattttacggc	CRISPR spacer
ttgacaaaagacggtagccacagttttacggc	Protospacer
.  . .  ********** ***.*********

83. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

-tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
atgtattttc-ttgccggatgcggcgtaaacgccttatccggcctacagg	Protospacer
 * *.*. .* ******* ********.*******************..*

84. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.796

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ctatgctcaaatgccggatgcggcgtgaacgccttatccggcctacgca	Protospacer
.*   * * * ****** ***************************** .

85. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.796

-tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
gtccgttgtt-ttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 *..**.... ******* ****************************.*.

86. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 10, identity: 0.796

----tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
gcgctttat----gttgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
    ***.*    .******* ********.*******************.*.

87. spacer 1.3|2336546|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026963 (Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1) position: , mismatch: 11, identity: 0.656

tgcatagctttggcttcttctttaacggacgc	CRISPR spacer
aatatagctttagctttttctttaaccttttt	Protospacer
 ..********.****.*********   . .

88. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014052 (Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

89. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP688397 (Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

90. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

91. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025539 (Vibrio harveyi strain 345 plasmid p345-185, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

92. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to MN865127 (Vibrio alginolyticus strain C1579 plasmid pC1579, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

93. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NC_025127 (Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

94. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NC_016983 (Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

95. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034301 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

96. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to KX957970 (Vibrio parahaemolyticus plasmid pVPS43, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

97. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to KX957971 (Vibrio parahaemolyticus plasmid pVPS62, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

98. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to KX957972 (Vibrio parahaemolyticus plasmid pVPS91, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

99. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to KX957968 (Vibrio alginolyticus plasmid pVAS19, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

100. spacer 1.6|2336729|32|NZ_CP027447|PILER-CR,CRISPRCasFinder,CRT matches to KX957969 (Vibrio alginolyticus plasmid pVAS114, complete sequence) position: , mismatch: 11, identity: 0.656

ccgttttcgattgaacagaaagatttcaacac	CRISPR spacer
agtctttagatagaacagaaagatttcggatg	Protospacer
   .*** *** ***************..

101. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

-------tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
agcttagttta-------tgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
       ***.       ****** ***************************** .

102. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
gctgtagtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
 .*** ...  ****** ***************************** .

103. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

-------tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
agcttagttta-------tgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
       ***.       ****** ***************************** .

104. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
gctgtagtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
 .*** ...  ****** ***************************** .

105. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

-------tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
agcttagttta-------tgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
       ***.       ****** ***************************** .

106. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
gctgtagtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
 .*** ...  ****** ***************************** .

107. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

-------tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
agcttagttta-------tgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
       ***.       ****** ***************************** .

108. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
gctgtagtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
 .*** ...  ****** ***************************** .

109. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.776

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
aatcaaatttttgccggatgcggcgtgaacgccttatccggcctacaac	Protospacer
  *   *.. ******* ****************************.*

110. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.776

-------tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
gtacggcttt-------ttgccggatgcggcgtaaacgccttatccggcctacggt	Protospacer
       ***       ******* ********.********************.

111. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.776

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
aatgcgtaaaatgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
  **.    * ****** ****************************.*.

112. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.776

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
cgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaat	Protospacer
. **.  * * ****** ********************** *****.*

113. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 11, identity: 0.776

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ctcgcagtgtttgccggatgcggcgtgaacgccttatccgacctacgtg	Protospacer
.*.*. ..  ******* **********************.****** *

114. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ctacatgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
.*   ....  ****** ******************************.

115. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ctacatgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
.*   ....  ****** ******************************.

116. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ctacatgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
.*   ....  ****** ******************************.

117. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ctacatgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
.*   ....  ****** ******************************.

118. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
cggcgcacaattgccggatgcggcgtgaacgccttatccgcctaccgaa	Protospacer
.    *** ******** ********************** *.  ***.

119. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
cgtgcacaaaatgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
. **.    * ****** ********.*******************.*.

120. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
cgcgttgtttatgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
. .**....  ****** ****************************.*.

121. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
caggcgctggttgccggatgcggcgtgaacgccttatccggcctacatt	Protospacer
.  *.  . .******* ****************************.

122. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
caggcgttgattgccggatgcggcgtaaacgccttatccggcctacatt	Protospacer
.  *.  . ******** ********.*******************.

123. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
aattgagctggtgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
  *   .*.. ****** ********.*******************.*.

124. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 13, identity: 0.735

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
ttacatgtttatgccggatgcggtgtgaacgccttatccggcctacgga	Protospacer
**   ....  ****** *****.***********************..

125. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 13, identity: 0.735

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
cgcgttgttcatgccggatgcggcgtgaacgccttatccagcctacaaa	Protospacer
. .**....  ****** *********************.******.*.

126. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 13, identity: 0.735

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
cgcgttgtttatgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
. .**....  ****** ********.*******************.*.

127. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 13, identity: 0.735

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
cgcgttgttcatgccggatgcggcgtgaacgccttatccagcctacaaa	Protospacer
. .**....  ****** *********************.******.*.

128. spacer 3.1|4721674|49|NZ_CP027447|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 14, identity: 0.714

tttgtcaccattgccggttgcggcgtgaacgccttatccggcctacgag	CRISPR spacer
cgctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatt	Protospacer
. .   .* * ****** ********.*******************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

94509 : 199559

109

Salmonella_phage(63.46%)

portal,lysis,terminase,protease,capsid,tail,plate,integrase,transposase,head

attL 122434:122449|attR 148289:148304

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000399664.1\|94509_95490_+\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA
WP_096986489.1\|95749_97009_-	DUF1479 domain-containing protein	NA	NA	NA	NA
WP_000114247.1\|97160_97976_-	sugar-phosphatase YbiV	NA	NA	NA	NA
WP_096986488.1\|98121_100554_-	glycyl radical protein	A0A076YHZ7	Citrobacter_phage	6.1e-09	43.5
WP_001571157.1\|100559_101459_-	glycyl-radical enzyme activating protein	NA	NA	NA	NA
WP_077737785.1\|101589_102252_+	fructose-6-phosphate aldolase	C7BV14	Synechococcus_phage	1.3e-25	33.0
WP_024247905.1\|102330_103077_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_000397358.1\|103076_104312_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA
WP_000513801.1\|104515_105481_+	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_096986487.1\|105467_107339_+	glutathione ABC transporter ATP-binding protein GsiA	G9BWD6	Planktothrix_phage	5.2e-16	29.7
WP_096986486.1\|107358_108897_+	glutathione ABC transporter substrate-binding protein GsiB	NA	NA	NA	NA
WP_000936052.1\|108914_109835_+	glutathione ABC transporter permease GsiC	NA	NA	NA	NA
WP_001236044.1\|109837_110749_+	glutathione ABC transporter permease GsiD	NA	NA	NA	NA
WP_000950331.1\|110925_113274_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000086870.1\|113281_114610_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_001280945.1\|114679_115009_-	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000539521.1\|114998_115385_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000049367.1\|115610_116936_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_000497137.1\|117148_117532_+	biofilm formation regulator BssR	NA	NA	NA	NA
WP_000555050.1\|117642_118758_+	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA
WP_096986484.1\|118754_119381_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_000195961.1\|119627_120830_+	serine-type D-Ala-D-Ala carboxypeptidase	B6DZZ7	Stx2-converting_phage	8.2e-100	48.0
WP_000450130.1\|120876_121635_-	DNA-binding transcriptional repressor DeoR	NA	NA	NA	NA
WP_000892317.1\|121692_122289_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
122434:122449	attL	NA	NA	NA	NA
WP_001330495.1\|122573_123806_+	multidrug efflux MFS transporter MdfA	NA	NA	NA	NA
WP_000605480.1\|123846_124131_-	hypothetical protein	NA	NA	NA	NA
WP_075861886.1\|124215_125031_-	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase	NA	NA	NA	NA
WP_000217859.1\|125030_126239_-	MFS transporter	NA	NA	NA	NA
WP_001297003.1\|126322_126859_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_106901651.1\|126963_128016_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	7.0e-103	55.5
WP_106901652.1\|128204_128396_-	hypothetical protein	A0A0R6PI25	Moraxella_phage	1.4e-09	60.0
WP_053295956.1\|128411_128981_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	3.8e-39	43.9
WP_001247707.1\|129106_129328_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|129360_129870_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956188.1\|129877_130174_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.3e-22	92.3
WP_000934004.1\|130259_130508_-	hypothetical protein	NA	NA	NA	NA
WP_000963854.1\|130590_130932_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	2.3e-55	98.2
WP_001244216.1\|130999_131233_+	DUF2732 family protein	E5G6L6	Salmonella_phage	9.2e-32	96.1
WP_000752613.1\|131232_131460_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	2.7e-36	100.0
WP_106901653.1\|131456_132314_+	DNA adenine methylase	E5G6L8	Salmonella_phage	1.9e-159	96.8
WP_106901654.1\|132310_134725_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_001154431.1\|134877_135066_+	hypothetical protein	E5G6M0	Salmonella_phage	1.6e-26	96.8
WP_147590295.1\|135076_135310_+	DinI family protein	E5G6M1	Salmonella_phage	1.4e-35	98.7
WP_001059831.1\|135502_135838_-	hypothetical protein	NA	NA	NA	NA
WP_106901657.1\|136303_137956_+	NTPase	X2KLG0	Campylobacter_phage	2.3e-15	23.2
WP_106901658.1\|137994_139023_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	6.5e-170	87.3
WP_001098431.1\|139022_140789_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
WP_000216240.1\|140931_141765_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	3.1e-122	92.1
WP_000742511.1\|141781_142840_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
WP_000059199.1\|142843_143494_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	5.6e-111	95.4
WP_000673509.1\|143589_144054_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	2.7e-75	87.7
WP_000868175.1\|144053_144257_+\|tail	tail protein X	E5G6M9	Salmonella_phage	1.4e-31	92.5
WP_106901659.1\|144260_144476_+	hypothetical protein	E5G6N0	Salmonella_phage	3.1e-26	78.9
WP_106901660.1\|144456_144972_+	lysozyme	E5G6N1	Salmonella_phage	1.6e-89	92.4
WP_000196204.1\|144968_145397_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	1.9e-59	91.5
WP_106901661.1\|145492_145924_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	2.2e-71	93.0
WP_106901662.1\|145916_146375_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	4.6e-59	80.1
WP_000906671.1\|146393_147251_-	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_000276794.1\|147237_148494_-	AAA family ATPase	NA	NA	NA	NA
148289:148304	attR	NA	NA	NA	NA
WP_106901797.1\|148606_149185_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	2.1e-93	85.9
WP_106901663.1\|149181_149541_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.7e-51	85.7
WP_001522714.1\|149527_150436_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.7e-143	90.7
WP_001522715.1\|150428_151034_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-109	92.0
WP_106901664.1\|152409_152832_+\|tail	phage tail protein	A0A0F7LDZ0	Escherichia_phage	3.5e-21	37.3
WP_106901665.1\|153016_154054_-	acyltransferase family protein	NA	NA	NA	NA
WP_106901666.1\|154848_156021_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.5e-202	90.0
WP_106901667.1\|156030_156546_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	1.4e-88	94.2
WP_001281010.1\|156600_156903_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	1.7e-38	88.0
WP_000763311.1\|156917_157037_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
WP_106901668.1\|157029_160107_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	63.1
WP_000980413.1\|160103_160589_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	6.3e-67	80.6
WP_001011797.1\|160585_161686_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.7e-176	88.0
WP_000972391.1\|161776_161995_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_001024876.1\|162230_163916_-	aspartate:alanine antiporter	NA	NA	NA	NA
WP_000681108.1\|164185_164563_+	hypothetical protein	NA	NA	NA	NA
WP_001195231.1\|164592_164850_-	glutaredoxin 1	A0A2I7SAE2	Vibrio_phage	7.8e-24	63.1
WP_001201575.1\|165009_165297_+	DUF1418 family protein	NA	NA	NA	NA
WP_001571168.1\|165280_166003_+	nitroreductase NfsA	NA	NA	NA	NA
WP_000684321.1\|166063_166966_+	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.6e-37	34.4
WP_000203025.1\|167053_167530_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_096986483.1\|167880_168993_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_001544415.1\|169087_170221_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	1.4e-29	34.0
WP_000105436.1\|170230_171184_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_001061658.1\|171180_172026_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_000389260.1\|172085_172574_+	YbjO family protein	NA	NA	NA	NA
WP_096884056.1\|172614_173742_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	3.5e-28	27.6
WP_001354873.1\|173770_174502_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000464489.1\|174727_175396_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_001001691.1\|175395_176112_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_000756575.1\|176118_176850_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000027205.1\|176867_177596_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	6.0e-29	36.7
WP_094030286.1\|177813_178329_-	lipoprotein	NA	NA	NA	NA
WP_097291174.1\|178976_180746_+	hypothetical protein	NA	NA	NA	NA
WP_001160731.1\|180956_181280_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_001255171.1\|181276_182107_+	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.3e-07	30.0
WP_001305933.1\|182103_183117_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_001578053.1\|183215_184646_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_024230236.1\|184656_185658_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_075861890.1\|185694_187413_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	8.9e-31	24.0
WP_000178672.1\|187545_188514_-	NADH oxidoreductase	NA	NA	NA	NA
WP_022645440.1\|188525_190178_-	hydroxylamine reductase	NA	NA	NA	NA
WP_022645441.1\|190320_191220_-	L-lysine exporter LysO	NA	NA	NA	NA
WP_000488716.1\|191677_192373_-	aquaporin Z	NA	NA	NA	NA
WP_000599806.1\|192798_194457_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_137504573.1\|194453_195410_-	DUF535 domain-containing protein	NA	NA	NA	NA
WP_000746460.1\|195560_196676_+	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_096986480.1\|196672_198619_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.1e-37	40.1
WP_000410785.1\|198691_198916_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
WP_000520781.1\|199238_199559_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4

DBSCAN-SWA_2

734034 : 804958

Escherichia_phage(49.09%)

transposase,head,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000399664.1\|734034_735015_-\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA
WP_096987262.1\|735241_736135_-	PhzF family isomerase	NA	NA	NA	NA
WP_072157219.1\|736214_736892_-	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA
WP_001166367.1\|736891_737587_-	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA
WP_000702551.1\|737586_739131_-	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	6.4e-20	39.2
WP_001361907.1\|739127_742868_-	nitrate reductase Z subunit alpha	NA	NA	NA	NA
WP_001207907.1\|742962_744351_-	NarK family nitrate/nitrite MFS transporter	NA	NA	NA	NA
WP_075861664.1\|744660_745917_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_123001204.1\|745979_747239_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_000768393.1\|747408_748509_-	porin OmpC	Q1MVN1	Enterobacteria_phage	5.3e-138	65.4
WP_000198203.1\|748766_749648_-	aromatic amino acid efflux DMT transporter YddG	NA	NA	NA	NA
WP_012311994.1\|749879_752927_+	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA
WP_001240581.1\|752939_753824_+	formate dehydrogenase N subunit beta	NA	NA	NA	NA
WP_000045650.1\|753816_754470_+	formate dehydrogenase-N subunit gamma	NA	NA	NA	NA
WP_000781370.1\|754520_754805_-	HigA family addiction module antidote protein	A0A2L1IV52	Escherichia_phage	1.2e-20	51.1
WP_000642406.1\|754950_755961_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	9.6e-25	25.3
WP_000433462.1\|756094_757792_-	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_000841554.1\|757948_758086_-	stationary-phase-induced ribosome-associated protein	NA	NA	NA	NA
WP_000495766.1\|758187_758403_-	biofilm-dependent modulation protein	NA	NA	NA	NA
WP_000152305.1\|758747_759179_+	peroxiredoxin OsmC	NA	NA	NA	NA
WP_001285551.1\|759234_760161_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-14	29.6
WP_000193514.1\|760153_761140_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.8e-18	32.1
WP_000979619.1\|761136_762033_-	D,D-dipeptide ABC transporter permease	NA	NA	NA	NA
WP_000145126.1\|762029_763052_-	ABC transporter permease	NA	NA	NA	NA
WP_000191335.1\|764649_765165_-	hypothetical protein	A0A0C4UQZ2	Shigella_phage	1.6e-23	40.5
WP_000985458.1\|765365_765584_+	transcriptional regulator	A0A0C4UQU0	Shigella_phage	5.4e-18	66.7
WP_047660752.1\|765586_767587_+\|transposase	transposase	C9DGL1	Escherichia_phage	0.0e+00	94.8
WP_047660754.1\|767625_768564_+	AAA family ATPase	A0A0C4UQR3	Shigella_phage	1.9e-168	97.4
WP_000968312.1\|768579_768807_+	hypothetical protein	C9DGL3	Escherichia_phage	3.2e-37	100.0
WP_021560932.1\|769051_769321_+	hypothetical protein	C9DGL5	Escherichia_phage	8.5e-05	31.5
WP_001101157.1\|769341_769761_+	hypothetical protein	C9DGL6	Escherichia_phage	9.9e-77	99.3
WP_000255655.1\|769761_770061_+	hypothetical protein	C9DGL7	Escherichia_phage	2.8e-49	99.0
WP_001107930.1\|770080_770605_+	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	1.5e-90	100.0
WP_021537262.1\|770703_771234_+	hypothetical protein	A0A0C4UQU2	Shigella_phage	2.1e-95	93.8
WP_047660757.1\|771233_771758_+	hypothetical protein	C9DGM0	Escherichia_phage	8.3e-89	93.4
WP_001621843.1\|771754_772423_+	hypothetical protein	Q71T76	Escherichia_phage	2.6e-79	64.6
WP_001621849.1\|772425_772767_+	hypothetical protein	NA	NA	NA	NA
WP_024193941.1\|772840_773392_+	regulatory protein GemA	A0A0C4UQU3	Shigella_phage	2.6e-101	98.9
WP_000133856.1\|773388_773778_+	Middle operon regulator	A0A0C4UR27	Shigella_phage	7.8e-68	99.2
WP_000515809.1\|773855_774086_+	hypothetical protein	A0A0C4UQR6	Shigella_phage	6.3e-41	98.7
WP_001163386.1\|774197_774620_+	positive regulator of late transcription	A0A0C4UQZ9	Shigella_phage	2.9e-76	100.0
WP_052322939.1\|774714_775230_+	lysozyme	C9DGM9	Escherichia_phage	9.3e-93	98.2
WP_042631109.1\|775213_775600_+	hypothetical protein	A0A0C4UR28	Shigella_phage	2.6e-63	100.0
WP_001001318.1\|775758_775953_+	hypothetical protein	A0A0C4UQR7	Shigella_phage	6.2e-34	100.0
WP_000364295.1\|775952_776252_+	DUF2730 family protein	C9DGN2	Escherichia_phage	5.8e-47	100.0
WP_000606409.1\|776248_776539_+	hypothetical protein	A0A0C4UR00	Shigella_phage	7.4e-47	100.0
WP_000375394.1\|776550_777126_+	DUF3486 family protein	A0A0C4UQU5	Shigella_phage	9.1e-97	100.0
WP_047660766.1\|777133_778789_+	Mu-like prophage FluMu protein gp28	C9DGN5	Escherichia_phage	0.0e+00	99.6
WP_000532642.1\|778788_780327_+	DUF935 domain-containing protein	A0A0C4UQR8	Shigella_phage	2.1e-297	99.6
WP_047660768.1\|780307_781627_+\|head	phage head morphogenesis protein	A0A0C4UQY9	Shigella_phage	1.2e-248	98.4
WP_000050890.1\|781623_782094_+	phage virion morphogenesis protein	A0A0C4UR01	Shigella_phage	3.2e-84	98.7
WP_021537254.1\|782290_783376_+	hypothetical protein	C9DGP0	Escherichia_phage	1.2e-195	99.7
WP_047660771.1\|783372_784290_+\|head	head protein	A0A0C4UQR9	Shigella_phage	2.4e-176	97.7
WP_021537253.1\|784356_784767_+	hypothetical protein	A0A0C4UQZ0	Shigella_phage	5.2e-62	97.1
WP_001104972.1\|784763_785189_+	DUF1320 family protein	C9DGP4	Escherichia_phage	4.2e-75	100.0
WP_000888927.1\|785188_785737_+	DUF1834 family protein	C9DGP5	Escherichia_phage	1.1e-104	100.0
WP_001409561.1\|785723_785927_+	DUF2635 domain-containing protein	C9DGP6	Escherichia_phage	6.3e-29	98.5
WP_001280310.1\|785923_787411_+\|tail	tail protein	C9DGP7	Escherichia_phage	1.3e-280	99.6
WP_000918404.1\|787420_787777_+\|tail	tail protein	C9DGP8	Escherichia_phage	2.4e-63	100.0
WP_000344073.1\|787786_788221_+	hypothetical protein	C9DGP9	Escherichia_phage	3.8e-71	97.9
WP_047660774.1\|788365_790438_+	tape measure protein	C9DGQ1	Escherichia_phage	0.0e+00	97.2
WP_047660776.1\|790442_791930_+	multidrug DMT transporter permease	C9DGQ2	Escherichia_phage	6.3e-243	99.4
WP_047660778.1\|791922_793062_+\|plate	baseplate protein	C9DGQ3	Escherichia_phage	8.9e-213	99.2
WP_000442748.1\|793049_793643_+\|plate	phage baseplate assembly protein	A0A0C4UQZ3	Shigella_phage	1.2e-107	99.0
WP_000130548.1\|793639_794077_+	hypothetical protein	A0A0C4UR04	Shigella_phage	1.0e-79	100.0
WP_000331811.1\|794077_795160_+\|plate	baseplate J/gp47 family protein	C9DGQ6	Escherichia_phage	1.1e-207	100.0
WP_000301698.1\|795150_795693_+	DUF2313 domain-containing protein	C9DGQ7	Escherichia_phage	1.3e-100	100.0
WP_047660781.1\|795692_797048_+	hypothetical protein	C9DGQ8	Escherichia_phage	2.3e-106	52.0
WP_032163028.1\|797049_797577_+\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	4.3e-77	82.3
WP_047660783.1\|797605_798139_-\|tail	tail fiber assembly protein	C9DGR0	Escherichia_phage	1.4e-62	66.7
WP_000905064.1\|799102_799684_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.6e-104	99.5
WP_001300256.1\|799778_799967_+	Com family DNA-binding transcriptional regulator	A0A0C4UQS3	Shigella_phage	1.3e-31	100.0
WP_032162872.1\|799917_800634_+	hypothetical protein	A0A0C4UQZ7	Shigella_phage	2.2e-132	98.7
WP_032162871.1\|800763_801105_+	hypothetical protein	NA	NA	NA	NA
WP_001285824.1\|801719_802301_-	D-alanyl-D-alanine dipeptidase	NA	NA	NA	NA
WP_123000016.1\|802558_804958_-	oxygen-sensing cyclic-di-GMP phosphodiesterase	A0A1V0SL97	Klosneuvirus	1.6e-09	22.0

DBSCAN-SWA_3

878235 : 935777

Enterobacteria_phage(39.62%)

portal,lysis,terminase,capsid,transposase,integrase,tail,head

attL 883325:883340|attR 928829:928844

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096986583.1\|878235_879696_-	mannitol dehydrogenase family protein	G8DCZ3	Micromonas_pusilla_virus	1.7e-43	29.9
WP_000347479.1\|879784_881068_-	MHS family MFS transporter	NA	NA	NA	NA
WP_120795384.1\|881671_881785_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|881853_882087_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000086514.1\|882403_882994_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	7.3e-25	38.8
WP_000355360.1\|883221_883515_-	hypothetical protein	NA	NA	NA	NA
883325:883340	attL	NA	NA	NA	NA
WP_000654171.1\|883527_883806_-	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	2.9e-24	55.4
WP_097291164.1\|883802_885827_-\|tail	phage tail protein	A0A0E3M0V5	Enterobacteria_phage	3.2e-181	72.3
WP_001230558.1\|885891_886491_-	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	4.5e-107	96.0
WP_047664591.1\|886557_890037_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.5
WP_072032980.1\|890097_890730_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.5e-95	98.6
WP_001361515.1\|890666_891410_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.0e-148	97.2
WP_001152639.1\|891415_892114_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.3e-134	100.0
WP_000847345.1\|892113_892443_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
WP_097291163.1\|892439_895019_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	94.3
WP_000459457.1\|895011_895446_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_097291162.1\|895427_895850_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.8e-70	97.9
WP_001349920.1\|895865_896606_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	7.8e-133	100.0
WP_000683105.1\|896613_897009_-\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	1.0e-70	100.0
WP_000975070.1\|897005_897584_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.7e-80	100.0
WP_000753007.1\|897595_897949_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	4.4e-62	99.1
WP_000158868.1\|897960_898356_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	5.7e-58	95.5
WP_000063218.1\|898397_899423_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.4e-188	97.7
WP_047663921.1\|899478_899811_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.4e-54	98.2
WP_021563108.1\|899820_901140_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.1e-233	98.6
WP_001676384.1\|901120_902722_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	3.8e-310	99.2
WP_000198149.1\|902718_902925_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_096247525.1\|902921_904847_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.2
WP_000453576.1\|904821_905367_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	4.7e-95	99.4
WP_001368374.1\|905755_905989_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	84.1
WP_000373090.1\|906046_906457_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.5e-56	79.4
WP_001019606.1\|906608_906782_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_123001190.1\|906953_907109_-	hypothetical protein	NA	NA	NA	NA
WP_120795388.1\|907188_907254_-	Qin prophage; protein YnfR	NA	NA	NA	NA
WP_071524604.1\|907256_907445_-	cold-shock protein	NA	NA	NA	NA
WP_000066495.1\|907455_907668_-	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_001071769.1\|908030_908528_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
WP_001092971.1\|908524_909058_-	lysozyme	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
WP_000189916.1\|909054_909366_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
WP_000839590.1\|909370_909586_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.1e-31	94.4
WP_000066484.1\|910339_910555_-	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
WP_000087756.1\|910855_911068_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_120795389.1\|911122_911212_+	Qin prophage; protein YnfS	NA	NA	NA	NA
WP_001047135.1\|911489_912242_-	antitermination protein	A0A192Y5X6	Salmonella_phage	7.1e-134	92.8
WP_001265199.1\|912255_913305_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.8e-112	57.0
WP_012304870.1\|913306_913585_-	hypothetical protein	NA	NA	NA	NA
WP_000980994.1\|913651_913903_-	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|914119_914275_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_000323025.1\|914346_914634_-	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000534858.1\|914633_914873_-	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_001326990.1\|914897_915203_+	hypothetical protein	NA	NA	NA	NA
WP_001301033.1\|915405_915738_+	protein FlxA	NA	NA	NA	NA
WP_000589005.1\|916174_917488_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000955178.1\|917665_917848_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	6.3e-12	74.5
WP_001310834.1\|919154_919511_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.6e-38	69.6
WP_001151262.1\|919507_919930_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.4e-64	92.0
WP_000054512.1\|919970_920936_-	hypothetical protein	U5P0A0	Shigella_phage	2.2e-55	60.2
WP_000705358.1\|920916_921438_-	hypothetical protein	NA	NA	NA	NA
WP_000920568.1\|921421_921652_-	dicB transcriptional regulator DicC	NA	NA	NA	NA
WP_000448564.1\|921735_922143_+	DNA-binding transcriptional dual regulator DicA	K7PM82	Enterobacteria_phage	4.4e-13	54.7
WP_000379575.1\|922309_922465_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_001171942.1\|922624_922843_+	hypothetical protein	NA	NA	NA	NA
WP_001329848.1\|922846_923011_-	hypothetical protein	NA	NA	NA	NA
WP_000854559.1\|923410_923599_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001083297.1\|923595_923787_+\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_000048342.1\|923879_926351_+	exonuclease	A0A192Y6E0	Salmonella_phage	8.5e-59	56.7
WP_001296941.1\|926438_926675_+	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_123001189.1\|926709_927990_+\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	3.6e-154	61.8
WP_001360138.1\|928009_928120_-	hypothetical protein	NA	NA	NA	NA
WP_000836084.1\|928177_929197_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	7.4e-17	25.9
928829:928844	attR	NA	NA	NA	NA
WP_001295394.1\|929208_930423_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_001304355.1\|930628_930955_-	YnfA family protein	A0A218MNG8	uncultured_virus	2.9e-23	54.5
WP_000705197.1\|931089_931431_+	DUF1283 family protein	NA	NA	NA	NA
WP_001138584.1\|931465_932026_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_032142801.1\|932028_932739_-	YnfC family lipoprotein	NA	NA	NA	NA
WP_001295396.1\|932846_933152_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_061092693.1\|933350_935777_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.0e-213	49.1

DBSCAN-SWA_4

947240 : 1031163

Burkholderia_virus(34.09%)

terminase,tail,tRNA,transposase,plate,integrase,protease,head

attL 940340:940355|attR 1034729:1034744

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
940340:940355	attL	NA	NA	NA	NA
WP_075862245.1\|947240_948062_+\|protease	serine protease	NA	NA	NA	NA
WP_000046661.1\|948100_948430_-	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_000276149.1\|948416_948782_-	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_001303517.1\|948888_949059_-	hypothetical protein	NA	NA	NA	NA
WP_075862246.1\|949193_950228_+	AI-2 transporter TqsA	NA	NA	NA	NA
WP_000014036.1\|950252_951641_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
WP_001298661.1\|951651_953184_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_000769322.1\|953708_954653_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000412379.1\|954838_956221_+	amino acid permease	NA	NA	NA	NA
WP_001552898.1\|956257_956980_+	dihydromonapterin reductase	NA	NA	NA	NA
WP_000524861.1\|956976_957312_-	GlpM family protein	NA	NA	NA	NA
WP_001298660.1\|957440_958160_+	two-component system response regulator RstA	NA	NA	NA	NA
WP_075862247.1\|958163_959465_+	two-component system sensor histidine kinase RstB	W8CYF6	Bacillus_phage	9.5e-17	24.2
WP_001295399.1\|959540_960470_+	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_001099102.1\|960466_961870_-	class II fumarate hydratase	NA	NA	NA	NA
WP_000066639.1\|962012_963659_-	fumarate hydratase	NA	NA	NA	NA
WP_096986585.1\|963857_965033_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_096986586.1\|965133_966642_+	YdgA family protein	NA	NA	NA	NA
WP_001227015.1\|966867_968133_-	glucuronide uptake porin UidC	NA	NA	NA	NA
WP_001075893.1\|968171_969545_-	glucuronide transporter	NA	NA	NA	NA
WP_075862250.1\|969541_971353_-	beta-glucuronidase	B9U1V4	Vaccinia_virus	0.0e+00	99.7
WP_000969092.1\|971742_972333_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000483371.1\|972553_973321_-	7-alpha-hydroxysteroid dehydrogenase	NA	NA	NA	NA
WP_000179513.1\|973432_974461_-	Mal regulon transcriptional regulator MalI	NA	NA	NA	NA
WP_096986587.1\|974635_976228_+	PTS maltose transporter subunit IICB	NA	NA	NA	NA
WP_000459372.1\|976237_977410_+	bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY	NA	NA	NA	NA
WP_000567514.1\|977513_978515_+	adenosine deaminase	NA	NA	NA	NA
WP_096986588.1\|978550_979591_-	oxidoreductase	NA	NA	NA	NA
WP_001296096.1\|979833_979959_+	division septum protein Blr	NA	NA	NA	NA
WP_000217950.1\|980231_980447_+	transcription modulator YdgT	NA	NA	NA	NA
WP_000214176.1\|980532_980973_+	DUF2569 domain-containing protein	NA	NA	NA	NA
WP_000133193.1\|981049_981631_+	electron transport complex subunit RsxA	NA	NA	NA	NA
WP_000991809.1\|981630_982209_+	electron transport complex subunit RsxB	NA	NA	NA	NA
WP_096986589.1\|982201_984424_+	electron transport complex subunit RsxC	NA	NA	NA	NA
WP_001357315.1\|984424_985483_+	electron transport complex subunit RsxD	NA	NA	NA	NA
WP_000920799.1\|985486_986107_+	electron transport complex subunit RsxG	NA	NA	NA	NA
WP_001289646.1\|986110_986806_+	electron transport complex subunit E	NA	NA	NA	NA
WP_001030339.1\|986805_987441_+	endonuclease III	NA	NA	NA	NA
WP_000100942.1\|988051_989554_+	dipeptide/tripeptide permease DtpA	NA	NA	NA	NA
WP_000765742.1\|989659_990265_+	glutathione transferase GstA	NA	NA	NA	NA
WP_001302086.1\|990308_991169_-	pyridoxal kinase PdxY	NA	NA	NA	NA
WP_001295400.1\|991230_992505_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	8.8e-84	41.4
WP_001282325.1\|992633_993290_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_000061974.1\|993348_993678_-	C-type lysozyme inhibitor	NA	NA	NA	NA
WP_000835077.1\|993775_994885_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_001165548.1\|995078_995651_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	8.8e-84	84.7
WP_001298743.1\|995722_996184_+\|tail	tail fiber protein	K7P7Q7	Enterobacteria_phage	4.8e-40	55.8
WP_106901676.1\|996194_996671_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.0e-45	57.0
WP_032277290.1\|996677_997295_-\|tail	tail assembly protein	Q9MCR5	Enterobacteria_phage	1.5e-65	60.4
WP_069917721.1\|997294_997780_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.3e-40	53.0
WP_106901677.1\|997808_998324_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.8e-40	56.7
WP_106901678.1\|998351_999317_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	1.9e-62	52.6
WP_096149476.1\|999319_999898_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	4.1e-65	65.3
WP_000859112.1\|1000983_1001331_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.7e-34	61.5
WP_096149478.1\|1001387_1001915_-\|plate	phage baseplate assembly protein V	Q6QIA1	Burkholderia_phage	3.3e-21	46.5
WP_096149479.1\|1001911_1003066_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	7.2e-85	47.3
WP_010989167.1\|1003053_1003269_-	membrane protein	Q6QIA3	Burkholderia_phage	2.4e-18	60.0
WP_000458383.1\|1003265_1004150_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	7.5e-50	47.0
WP_106901679.1\|1004149_1006615_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	1.3e-168	42.6
WP_001148841.1\|1006707_1006845_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000084227.1\|1006789_1007125_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000110115.1\|1007222_1007504_-	hypothetical protein	NA	NA	NA	NA
WP_000034294.1\|1007506_1008028_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.8e-67	67.6
WP_044788978.1\|1008027_1009455_-\|tail	tail protein	A4JWK5	Burkholderia_virus	2.6e-217	77.8
WP_031606341.1\|1009444_1009699_-	hypothetical protein	NA	NA	NA	NA
WP_001101804.1\|1009695_1010160_-	hypothetical protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
WP_023892604.1\|1010159_1010606_-	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	1.7e-34	52.3
WP_023892603.1\|1010607_1010946_-	DUF2190 family protein	NA	NA	NA	NA
WP_106901680.1\|1010955_1011909_-	hypothetical protein	A4JWK0	Burkholderia_virus	2.6e-64	44.2
WP_001273074.1\|1011923_1013039_-	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_023892601.1\|1013253_1013712_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.2e-29	44.2
WP_000117556.1\|1013714_1014536_-\|head	phage head morphogenesis protein	A4JWJ6	Burkholderia_virus	3.1e-98	61.5
WP_023892600.1\|1014516_1016013_-	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	4.4e-167	59.4
WP_023892599.1\|1016012_1017329_-\|terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	9.8e-147	63.3
WP_023892598.1\|1017325_1017874_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	1.7e-36	47.3
WP_000227702.1\|1017876_1018188_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	3.0e-30	60.6
WP_000175097.1\|1018187_1018514_-	membrane protein	Q6QIC4	Burkholderia_phage	9.6e-19	49.5
WP_023892597.1\|1018510_1019164_-	hypothetical protein	J9SVN7	Pseudomonas_phage	6.2e-09	32.1
WP_023892596.1\|1019153_1019876_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	3.7e-63	58.9
WP_023892595.1\|1019878_1020229_-	membrane protein	A4JWP3	Burkholderia_virus	9.9e-22	52.2
WP_023892522.1\|1020359_1020785_+	ABC transporter ATPase	NA	NA	NA	NA
WP_023892521.1\|1020860_1021355_-	hypothetical protein	NA	NA	NA	NA
WP_023892520.1\|1021557_1022322_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	1.2e-99	64.4
WP_000052056.1\|1022438_1022786_-	helix-turn-helix transcriptional regulator	Q5ZQZ8	Pseudomonas_phage	1.1e-15	48.3
WP_000123377.1\|1022878_1023067_+	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	6.7e-17	69.4
WP_000047758.1\|1023119_1023428_+	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	3.5e-23	55.9
WP_031249600.1\|1023438_1024350_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.1e-69	51.8
WP_069915396.1\|1024353_1026135_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	1.1e-228	68.3
WP_000960670.1\|1026145_1027312_+	AAA family ATPase	A4JWN1	Burkholderia_virus	9.7e-122	59.7
WP_000843446.1\|1027314_1027584_+	hypothetical protein	NA	NA	NA	NA
WP_001140141.1\|1027611_1028142_+	host-nuclease inhibitor protein Gam	L7P7T1	Pseudomonas_phage	1.1e-59	67.9
WP_023892713.1\|1028430_1028703_+	hypothetical protein	NA	NA	NA	NA
WP_023892712.1\|1028712_1029009_+	hypothetical protein	NA	NA	NA	NA
WP_000763553.1\|1029023_1029239_+	hypothetical protein	NA	NA	NA	NA
WP_000132035.1\|1029235_1029919_+	DUF2786 domain-containing protein	L7P7W8	Pseudomonas_phage	2.9e-25	36.7
WP_023892711.1\|1029915_1030146_+	hypothetical protein	NA	NA	NA	NA
WP_023892645.1\|1030135_1030351_+	hypothetical protein	NA	NA	NA	NA
WP_000988472.1\|1030340_1030793_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	1.6e-24	45.9
WP_001281696.1\|1030764_1031163_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.9e-30	55.9
1034729:1034744	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1357494 : 1417312

Escherichia_phage(39.34%)

portal,terminase,protease,capsid,holin,integrase,tail,head

attL 1415873:1415893|attR 1426588:1426608

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_106901682.1\|1357494_1358079_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.4e-105	96.4
WP_106901683.1\|1358078_1360403_-	short-chain dehydrogenase	A0A0K2FIZ6	Escherichia_phage	2.3e-215	97.8
WP_001568881.1\|1360467_1361067_-	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	2.5e-105	94.0
WP_106901684.1\|1361134_1364530_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	90.6
WP_069904023.1\|1364590_1365238_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.7e-112	97.7
WP_032215104.1\|1365135_1365879_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.0e-145	94.3
WP_054632287.1\|1365883_1366582_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	2.4e-131	97.4
WP_001114906.1\|1366581_1366923_-\|tail	tail protein	A0A0P0ZDL9	Stx2-converting_phage	4.6e-40	65.5
WP_097477333.1\|1366915_1370143_-\|tail	phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	97.6
WP_069904041.1\|1370583_1370862_-	DUF4035 domain-containing protein	A0A1B5FP87	Escherichia_phage	1.8e-34	82.6
WP_077757326.1\|1370885_1371272_-\|tail	phage tail protein	A0A1B5FP91	Escherichia_phage	8.9e-64	100.0
WP_062878028.1\|1371271_1371976_-\|tail	phage tail protein	A0A1B5FP82	Escherichia_phage	1.5e-117	95.7
WP_001406801.1\|1372036_1372381_-	DUF3168 domain-containing protein	A0A1B5FP84	Escherichia_phage	3.6e-56	98.2
WP_000968644.1\|1372377_1372827_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	6.1e-64	81.2
WP_069904028.1\|1372823_1373162_-\|head	phage head closure protein	A0A1B5FP90	Escherichia_phage	3.7e-50	89.3
WP_024201160.1\|1373170_1373488_-\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	1.1e-22	50.5
WP_096981142.1\|1373532_1374759_-\|capsid	phage major capsid protein	Q8W627	Enterobacteria_phage	1.1e-200	90.9
WP_001193625.1\|1374770_1375421_-\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	6.0e-121	100.0
WP_069904029.1\|1375398_1376640_-\|portal	phage portal protein	Q8W629	Enterobacteria_phage	7.9e-231	94.4
WP_069904030.1\|1376639_1376822_-	hypothetical protein	A0A1B5FP99	Escherichia_phage	4.8e-20	81.7
WP_000127864.1\|1378086_1379748_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	1.0e-278	82.8
WP_001353110.1\|1379731_1380088_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	6.1e-51	83.8
WP_001145897.1\|1380376_1380817_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	9.1e-65	76.0
WP_001288063.1\|1380816_1381116_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	6.1e-28	61.1
WP_122990468.1\|1381108_1382281_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	4.1e-205	87.9
WP_001181673.1\|1382324_1382885_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.7e-87	83.9
WP_032166736.1\|1382934_1384080_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	6.8e-144	68.2
WP_001145404.1\|1384354_1384603_-	hypothetical protein	NA	NA	NA	NA
WP_000164226.1\|1384593_1385136_-	ProQ/FinO family protein	Q2A0A1	Sodalis_phage	6.3e-07	34.0
WP_106901685.1\|1385172_1385598_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_097474947.1\|1385594_1385846_-	hypothetical protein	NA	NA	NA	NA
WP_097480874.1\|1386047_1387463_-	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	6.9e-114	58.2
WP_106901686.1\|1387459_1387759_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_106901687.1\|1387964_1388198_-	hypothetical protein	NA	NA	NA	NA
WP_024235460.1\|1388190_1388430_-	hypothetical protein	NA	NA	NA	NA
WP_063100535.1\|1388987_1389293_+	hypothetical protein	NA	NA	NA	NA
WP_021530546.1\|1390072_1390651_-	hypothetical protein	A0A1W6JPH8	Morganella_phage	9.2e-57	63.6
WP_021530547.1\|1390708_1390987_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000614825.1\|1391050_1391272_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_106901688.1\|1391249_1392473_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	5.1e-97	46.6
WP_001140906.1\|1392478_1393672_-\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	2.5e-197	99.7
WP_069904031.1\|1393671_1394154_-\|terminase	phage terminase small subunit P27 family	A0A1B5FPA0	Escherichia_phage	3.3e-84	97.5
WP_106901689.1\|1394382_1394898_+	hypothetical protein	A0A077K9U2	Edwardsiella_phage	3.7e-33	48.8
WP_106901690.1\|1395033_1395384_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	4.9e-61	93.9
WP_106901691.1\|1395391_1395592_-	hypothetical protein	NA	NA	NA	NA
WP_106901692.1\|1395588_1395828_-	hypothetical protein	NA	NA	NA	NA
WP_075329350.1\|1395913_1396099_-	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	1.9e-19	78.7
WP_032215161.1\|1396315_1396849_-	lysozyme	K7PLY1	Enterobacteria_phage	2.5e-101	98.9
WP_032215159.1\|1396904_1397219_-	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	1.0e-49	95.2
WP_001383275.1\|1397211_1397439_-\|holin	holin	M1FN85	Enterobacteria_phage	6.8e-32	93.0
WP_000756806.1\|1397795_1398065_-	Shiga toxin Stx1d subunit B	Q94LZ9	Enterobacteria_phage	2.8e-40	94.4
WP_000699959.1\|1398074_1399022_-	Shiga toxin Stx1d subunit A	Q777W4	Enterobacteria_phage	1.6e-162	94.0
WP_106901693.1\|1399805_1400624_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000090268.1\|1400774_1401146_-	antitermination protein	Q777W5	Enterobacteria_phage	3.0e-53	83.2
WP_032215155.1\|1401135_1401507_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	9.8e-36	62.8
WP_106901694.1\|1401519_1402569_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.0e-106	53.4
WP_072025759.1\|1402570_1402843_-	hypothetical protein	I6PCV7	Cronobacter_phage	4.7e-11	49.2
WP_001260977.1\|1402978_1403236_+	type II toxin-antitoxin system ParD family antitoxin	A0A0N7C055	Escherichia_phage	1.5e-30	86.7
WP_000220601.1\|1403241_1403541_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2R2Z2Y1	Escherichia_phage	1.8e-51	100.0
WP_106901695.1\|1403745_1404261_-	hypothetical protein	A0A076GCN9	Escherichia_phage	2.1e-36	75.5
WP_001224685.1\|1404426_1404609_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.6e-26	95.0
WP_147590301.1\|1404702_1405101_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	4.5e-55	95.8
WP_106901696.1\|1405060_1405597_-	hypothetical protein	A0A2I6TD51	Escherichia_phage	9.2e-51	90.3
WP_106901697.1\|1405589_1405889_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	4.8e-49	96.0
WP_047088415.1\|1405885_1406281_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	3.7e-33	54.6
WP_159032884.1\|1406310_1406853_-	replication protein	A0A0U2JGJ0	Escherichia_phage	7.8e-82	94.8
WP_147590303.1\|1406764_1407805_-	phage replisome organizer	A0A0U2RT81	Escherichia_phage	6.9e-103	91.9
WP_106901699.1\|1407876_1408302_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000391948.1\|1408285_1408567_-	hypothetical protein	K7PHA1	Enterobacteria_phage	8.5e-24	72.6
WP_000362152.1\|1408666_1409086_+	hypothetical protein	K7PK07	Enterobacteria_phage	4.0e-25	65.1
WP_000379575.1\|1409349_1409505_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_001171946.1\|1409664_1409883_+	hypothetical protein	NA	NA	NA	NA
WP_001296188.1\|1409886_1410051_-	hypothetical protein	NA	NA	NA	NA
WP_106901700.1\|1410450_1410639_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_106901701.1\|1410635_1410827_+	DUF1482 family protein	NA	NA	NA	NA
WP_106901702.1\|1410920_1413392_+	exonuclease	K7PLW7	Enterobacteria_phage	1.5e-58	61.2
WP_000096346.1\|1413450_1413654_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533619.1\|1413653_1414679_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.0e-102	57.9
WP_001302302.1\|1414914_1415712_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
1415873:1415893	attL	NA	NA	NA	NA
WP_096987167.1\|1416049_1417312_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.4e-73	41.3
WP_096987167.1\|1416049_1417312_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.4e-73	41.3
1426588:1426608	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1500816 : 1507120

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001610415.1\|1500816_1501359_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.6e-47	55.6
WP_096986540.1\|1501363_1502242_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.1e-106	64.1
WP_001023616.1\|1502300_1503200_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.2e-28	34.5
WP_032084602.1\|1503199_1504285_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.2e-101	53.9
WP_000183060.1\|1504657_1505551_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_096986541.1\|1505725_1507120_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	8.3e-19	31.9

DBSCAN-SWA_7

1598833 : 1608275

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096986561.1\|1598833_1599970_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.3e-163	98.0
WP_096986562.1\|1599966_1601967_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001296231.1\|1602091_1602553_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001295430.1\|1602593_1603064_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001308766.1\|1603110_1603830_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|1603826_1605512_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_052896128.1\|1605733_1606465_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|1606524_1606632_+	protein YohO	NA	NA	NA	NA
WP_032171571.1\|1606612_1607344_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_089583080.1\|1607348_1608275_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8

DBSCAN-SWA_8

1819751 : 1876827

Enterobacteria_phage(74.0%)

portal,terminase,capsid,tail,tRNA,holin,plate,integrase,transposase,head

attL 1834921:1834940|attR 1870884:1870903

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000156125.1\|1819751_1820654_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.1e-67	53.1
WP_001293612.1\|1820850_1821624_-	histidine ABC transporter ATP-binding protein HisP	M1I0T9	Acanthocystis_turfacea_Chlorella_virus	2.1e-08	28.2
WP_000569958.1\|1821631_1822348_-	ABC transporter permease	NA	NA	NA	NA
WP_000965518.1\|1822344_1823031_-	histidine ABC transporter permease HisQ	NA	NA	NA	NA
WP_000737621.1\|1823120_1823903_-	histidine ABC transporter substrate-binding protein HisJ	NA	NA	NA	NA
WP_000748259.1\|1824123_1824906_-	lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT	NA	NA	NA	NA
WP_000825700.1\|1825171_1825741_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_000334221.1\|1825835_1827353_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.5e-87	44.0
WP_000262113.1\|1827389_1827878_-	colicin V production protein	NA	NA	NA	NA
WP_000146992.1\|1828113_1828776_-	cell division protein DedD	NA	NA	NA	NA
WP_096987140.1\|1828765_1830034_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_000118404.1\|1830103_1831018_-	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
WP_000364327.1\|1831173_1831833_-	DedA family protein	NA	NA	NA	NA
WP_001283590.1\|1831915_1832728_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289165.1\|1832727_1833741_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_001534306.1\|1833806_1834964_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	4.6e-23	29.4
1834921:1834940	attL	NA	NA	NA	NA
WP_087892011.1\|1835122_1836127_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	2.0e-99	56.0
WP_001390705.1\|1836223_1836544_-	helix-turn-helix transcriptional regulator	Q1JS37	Enterobacteria_phage	1.4e-14	43.2
WP_000004249.1\|1836657_1836945_+	hypothetical protein	A0A0M4RCW1	Salmonella_phage	4.3e-23	52.6
WP_106901707.1\|1836951_1837158_+	hypothetical protein	NA	NA	NA	NA
WP_000813359.1\|1837410_1837752_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	3.9e-55	92.2
WP_042094569.1\|1837762_1838050_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	1.7e-32	75.8
WP_000357024.1\|1838061_1838304_+	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	1.5e-37	98.8
WP_122985461.1\|1838300_1838438_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	1.9e-08	100.0
WP_000985159.1\|1838499_1838703_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	1.0e-26	88.1
WP_000153674.1\|1838699_1838945_+	winged helix-turn-helix domain-containing protein	A0A0A7NV47	Enterobacteria_phage	3.3e-40	98.8
WP_054623006.1\|1838941_1839241_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	2.5e-42	91.9
WP_106901708.1\|1839252_1839870_+	hypothetical protein	S5MQL6	Escherichia_phage	5.3e-10	46.7
WP_000564231.1\|1839866_1840256_+	hypothetical protein	NA	NA	NA	NA
WP_106901709.1\|1840252_1843093_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	88.4
WP_000686510.1\|1843169_1844129_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	2.1e-178	98.7
WP_000211267.1\|1844133_1844445_+	chromosome partitioning protein	A0A0A7NPT5	Enterobacteria_phage	2.2e-41	83.5
WP_000087812.1\|1845565_1846612_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
WP_032358198.1\|1846611_1848363_-	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
WP_001262657.1\|1848517_1849354_+\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	3.0e-149	98.9
WP_106901710.1\|1849377_1850430_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.2e-192	97.1
WP_000632332.1\|1850475_1851276_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	1.4e-124	88.3
WP_000063103.1\|1851377_1851872_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.2e-89	99.4
WP_000864901.1\|1851871_1852072_+\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_000104350.1\|1852074_1852398_+\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
WP_000072327.1\|1852394_1852787_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_106901711.1\|1852783_1853311_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	5.4e-64	97.0
WP_097745547.1\|1853329_1853797_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	5.0e-85	98.7
WP_106901712.1\|1853789_1854425_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.3e-112	98.1
WP_106901713.1\|1854421_1855003_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	3.6e-101	97.4
WP_000213447.1\|1854999_1855350_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
WP_050877860.1\|1855353_1856250_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	3.9e-155	98.3
WP_000071724.1\|1856242_1856851_+\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.5e-86	74.9
WP_106901714.1\|1858438_1858897_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	3.0e-42	55.3
WP_042974162.1\|1858903_1859515_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	1.1e-84	79.5
WP_072035471.1\|1859514_1859973_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	9.0e-39	53.1
WP_089568628.1\|1859983_1860421_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	9.8e-43	62.0
WP_072262638.1\|1860461_1860890_-\|tail	tail fiber protein	K7PH60	Enterobacterial_phage	1.8e-49	69.3
WP_047663210.1\|1860900_1861407_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	6.0e-52	66.7
WP_001165544.1\|1861478_1862078_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.6e-86	86.3
WP_000979945.1\|1862104_1862593_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.4e-85	99.4
WP_106901715.1\|1862605_1865413_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	92.5
WP_000333503.1\|1865399_1865555_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_000651572.1\|1865563_1865938_-\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	9.0e-37	73.2
WP_000290462.1\|1865993_1866506_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	1.5e-90	97.1
WP_042028454.1\|1866505_1867690_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	9.0e-224	98.5
WP_000132840.1\|1867847_1868957_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	8.2e-195	94.3
WP_000488104.1\|1868999_1869260_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000078920.1\|1869451_1869592_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0
WP_001353016.1\|1869841_1870039_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000215758.1\|1869983_1870775_+	site-specific DNA-methyltransferase	Q775B4	Bordetella_phage	5.7e-65	52.1
WP_000615813.1\|1871004_1872000_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
1870884:1870903	attR	NA	NA	NA	NA
WP_000127788.1\|1871996_1873175_-	MFS transporter	NA	NA	NA	NA
WP_000817178.1\|1873441_1874662_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_096987139.1\|1874820_1876827_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA

DBSCAN-SWA_9

2238109 : 2329998

107

Burkholderia_virus(28.85%)

terminase,tail,tRNA,plate,integrase,transposase,head

attL 2248332:2248349|attR 2300807:2300824

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096987067.1\|2238109_2240740_-\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	5.5e-80	38.6
WP_022646015.1\|2240868_2241369_-	recombination regulator RecX	NA	NA	NA	NA
WP_000963143.1\|2241437_2242499_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	1.2e-113	63.4
WP_000132236.1\|2242578_2243076_-	nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	2.6e-31	49.7
WP_001328874.1\|2243220_2244306_-	lytic murein transglycosylase B	NA	NA	NA	NA
WP_000573321.1\|2244562_2245126_+	PTS glucitol/sorbitol transporter subunit IIC	NA	NA	NA	NA
WP_000196934.1\|2245122_2246082_+	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA
WP_000216201.1\|2246092_2246464_+	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
WP_001077354.1\|2246467_2247247_+	sorbitol-6-phosphate dehydrogenase	NA	NA	NA	NA
WP_000252908.1\|2247352_2247712_+	transcriptional regulator GutM	NA	NA	NA	NA
WP_000804550.1\|2247778_2248552_+	glucitol operon DNA-binding transcriptional repressor SrlR	NA	NA	NA	NA
2248332:2248349	attL	NA	NA	NA	NA
WP_001287401.1\|2248544_2249510_+	arabinose-5-phosphate isomerase GutQ	A0A2P0VNK5	Tetraselmis_virus	2.3e-36	33.9
WP_077516558.1\|2249506_2251021_-	nitric oxide reductase transcriptional regulator NorR	NA	NA	NA	NA
WP_096986971.1\|2251207_2252647_+	anaerobic nitric oxide reductase flavorubredoxin	NA	NA	NA	NA
WP_096986970.1\|2252643_2253777_+	NADH:flavorubredoxin reductase NorW	NA	NA	NA	NA
WP_075861746.1\|2253855_2256096_-	carbamoyltransferase HypF	NA	NA	NA	NA
WP_001078777.1\|2256248_2256776_-	electron transport protein HydN	NA	NA	NA	NA
WP_012602466.1\|2256924_2257938_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	4.6e-27	28.6
WP_024242331.1\|2258193_2259651_+	PTS cellobiose/arbutin/salicin transporter subunit IIBC	NA	NA	NA	NA
WP_075861763.1\|2259659_2261084_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_106901722.1\|2261170_2261413_-	hypothetical protein	NA	NA	NA	NA
WP_023892644.1\|2261801_2262434_-	hypothetical protein	NA	NA	NA	NA
WP_023277510.1\|2262548_2262947_-	hypothetical protein	Q6QIE8	Burkholderia_phage	3.9e-30	55.9
WP_031606346.1\|2262918_2263371_-	regulatory protein GemA	A4JWM5	Burkholderia_virus	2.8e-24	45.9
WP_000123379.1\|2263360_2263576_-	hypothetical protein	NA	NA	NA	NA
WP_023892711.1\|2263565_2263796_-	hypothetical protein	NA	NA	NA	NA
WP_023892693.1\|2263792_2264476_-	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	5.3e-35	37.8
WP_001610539.1\|2264472_2264778_-	hypothetical protein	NA	NA	NA	NA
WP_023892694.1\|2264787_2265060_-	hypothetical protein	NA	NA	NA	NA
WP_001140141.1\|2265348_2265879_-	host-nuclease inhibitor protein Gam	L7P7T1	Pseudomonas_phage	1.1e-59	67.9
WP_000843446.1\|2265906_2266176_-	hypothetical protein	NA	NA	NA	NA
WP_000960676.1\|2266178_2267345_-	AAA family ATPase	A4JWN1	Burkholderia_virus	3.3e-122	59.9
WP_042093485.1\|2267355_2269125_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	1.2e-227	68.3
WP_023892590.1\|2269128_2270043_-	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	3.4e-69	52.2
WP_021530190.1\|2270053_2270362_-	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	9.3e-24	55.9
WP_000200153.1\|2270414_2270603_-	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	6.1e-18	71.0
WP_023892592.1\|2271111_2272098_+	hypothetical protein	NA	NA	NA	NA
WP_001069607.1\|2272494_2272710_-	hypothetical protein	NA	NA	NA	NA
WP_031606340.1\|2272708_2273113_+	hypothetical protein	NA	NA	NA	NA
WP_023892594.1\|2273088_2273832_-	hypothetical protein	NA	NA	NA	NA
WP_023892595.1\|2273962_2274313_+	membrane protein	A4JWP3	Burkholderia_virus	9.9e-22	52.2
WP_023892596.1\|2274315_2275038_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	3.7e-63	58.9
WP_042093481.1\|2275027_2275681_+	lipoprotein	J9SVN7	Pseudomonas_phage	1.1e-08	32.1
WP_000175097.1\|2275677_2276004_+	membrane protein	Q6QIC4	Burkholderia_phage	9.6e-19	49.5
WP_000227702.1\|2276003_2276315_+	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	3.0e-30	60.6
WP_023892598.1\|2276317_2276866_+	DUF3486 family protein	A4JWJ3	Burkholderia_virus	1.7e-36	47.3
WP_023892599.1\|2276862_2278179_+\|terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	9.8e-147	63.3
WP_023892600.1\|2278178_2279675_+	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	4.4e-167	59.4
WP_000117556.1\|2279655_2280477_+\|head	phage head morphogenesis protein	A4JWJ6	Burkholderia_virus	3.1e-98	61.5
WP_023892601.1\|2280479_2280938_+	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.2e-29	44.2
WP_001273074.1\|2281152_2282268_+	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_023892602.1\|2282282_2283236_+	hypothetical protein	A4JWK0	Burkholderia_virus	9.9e-64	43.8
WP_023892603.1\|2283245_2283584_+	DUF2190 family protein	NA	NA	NA	NA
WP_023892604.1\|2283585_2284032_+	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	1.7e-34	52.3
WP_042093479.1\|2284031_2284496_+	hypothetical protein	Q6QIB2	Burkholderia_phage	2.0e-38	51.7
WP_031606341.1\|2284492_2284747_+	hypothetical protein	NA	NA	NA	NA
WP_000729860.1\|2284736_2286164_+\|tail	tail protein	A4JWK5	Burkholderia_virus	5.7e-217	77.6
WP_000034294.1\|2286163_2286685_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.8e-67	67.6
WP_000110117.1\|2286687_2286969_+	hypothetical protein	NA	NA	NA	NA
WP_000084230.1\|2287066_2287402_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001148841.1\|2287346_2287484_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_042093478.1\|2287577_2290043_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	1.6e-169	42.8
WP_023892609.1\|2290042_2290927_+\|tail	phage tail protein	A4JWL1	Burkholderia_virus	2.8e-52	45.0
WP_010989167.1\|2290923_2291139_+	membrane protein	Q6QIA3	Burkholderia_phage	2.4e-18	60.0
WP_000807996.1\|2291126_2292281_+	phage late control D family protein	Q6QIA2	Burkholderia_phage	4.2e-85	47.3
WP_042093476.1\|2292277_2292805_+\|plate	phage baseplate assembly protein V	Q6QIA1	Burkholderia_phage	2.0e-21	46.5
WP_000859112.1\|2292861_2293209_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.7e-34	61.5
WP_001219105.1\|2293199_2294303_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	3.2e-106	54.3
WP_042093474.1\|2294295_2294874_+\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.6e-64	64.7
WP_106901723.1\|2294876_2295845_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	7.7e-64	55.2
WP_042093473.1\|2295851_2296469_-\|tail	tail assembly protein	Q9MCR5	Enterobacteria_phage	1.3e-64	59.4
WP_000503754.1\|2296468_2296972_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.1e-42	53.4
WP_001165548.1\|2297043_2297616_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	8.8e-84	84.7
WP_000132961.1\|2298228_2298699_-	hydrogenase maturation peptidase HycI	NA	NA	NA	NA
WP_001291919.1\|2298691_2299102_-	HycH family protein	NA	NA	NA	NA
WP_000067399.1\|2299098_2299866_-	formate hydrogenlyase subunit HycG	NA	NA	NA	NA
WP_000493785.1\|2299865_2300408_-	formate hydrogenlyase subunit HycF	NA	NA	NA	NA
WP_001288134.1\|2300417_2302127_-	hydrogenase large subunit	NA	NA	NA	NA
2300807:2300824	attR	NA	NA	NA	NA
WP_000115226.1\|2302144_2303068_-	formate hydrogenlyase subunit HycD	NA	NA	NA	NA
WP_089583013.1\|2303070_2304897_-	formate hydrogenlyase subunit 3	NA	NA	NA	NA
WP_001079186.1\|2304893_2305505_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_000158061.1\|2305629_2306091_-	formate hydrogenlyase regulator HycA	NA	NA	NA	NA
WP_124056873.1\|2306178_2306397_-	hypothetical protein	NA	NA	NA	NA
WP_001299100.1\|2306302_2306653_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_096986969.1\|2306656_2307529_+	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA
WP_075861749.1\|2307519_2307792_+	hydrogenase 3 maturation protein HypC	NA	NA	NA	NA
WP_001212982.1\|2307791_2308913_+	hydrogenase formation protein HypD	NA	NA	NA	NA
WP_096986968.1\|2308909_2309920_+	hydrogenase maturation carbamoyl dehydratase HypE	NA	NA	NA	NA
WP_001361307.1\|2309993_2312072_+	formate hydrogenlyase transcriptional activator FlhA	NA	NA	NA	NA
WP_000301062.1\|2312116_2312545_+	transporter	NA	NA	NA	NA
WP_000015479.1\|2312583_2312928_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA
WP_001272887.1\|2313214_2315776_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	4.6e-31	20.7
WP_096986967.1\|2315881_2316538_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	1.3e-51	47.0
WP_001295181.1\|2316588_2317356_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_106901725.1\|2317551_2318460_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.3e-117	76.2
WP_000590408.1\|2318456_2319719_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001278992.1\|2319715_2320354_+	aldolase	A0A077SK32	Escherichia_phage	1.8e-82	74.5
WP_001136937.1\|2320358_2321135_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_096986966.1\|2321223_2322588_+	GntP family transporter	NA	NA	NA	NA
WP_000562982.1\|2322626_2322863_-	hypothetical protein	NA	NA	NA	NA
WP_097291288.1\|2322873_2324325_-	UbiD family decarboxylase	NA	NA	NA	NA
WP_001208067.1\|2324725_2325133_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000081550.1\|2325252_2326245_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_001272592.1\|2326307_2327447_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000254708.1\|2327586_2328213_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001295182.1\|2328206_2328968_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_075861751.1\|2328948_2329998_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA

DBSCAN-SWA_10

4503579 : 4576434

Emiliania_huxleyi_virus(11.11%)

protease,tRNA,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024223346.1\|4503579_4504932_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240896.1\|4504961_4507394_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758958.1\|4507515_4508001_+	molecular chaperone Skp	NA	NA	NA	NA
WP_064524990.1\|4508004_4509030_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210739.1\|4509134_4509590_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565966.1\|4509593_4510382_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_096986641.1\|4510381_4511530_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_000569424.1\|4511526_4512123_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	3.9e-26	40.0
WP_001294757.1\|4512159_4515642_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	36.9
WP_000055741.1\|4515654_4516614_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_097291328.1\|4516711_4518853_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901098.1\|4518909_4519299_+	VOC family protein	NA	NA	NA	NA
WP_096986639.1\|4519363_4520677_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062311.1\|4520710_4520971_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000417058.1\|4520957_4521158_-	YaeP family protein	NA	NA	NA	NA
WP_001540755.1\|4521323_4521869_+	YaeQ family protein	NA	NA	NA	NA
WP_000635534.1\|4521865_4522288_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_001601560.1\|4522301_4523012_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_096986638.1\|4523166_4523991_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA
WP_001260712.1\|4524043_4525762_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000094011.1\|4525873_4526581_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202329.1\|4526577_4526982_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874224.1\|4527099_4527915_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001294600.1\|4527954_4528608_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000593994.1\|4528600_4529632_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
WP_001140175.1\|4529819_4530395_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_096987254.1\|4536152_4536956_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	1.3e-37	35.7
WP_000648565.1\|4536952_4537867_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001230983.1\|4538107_4538908_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_096987255.1\|4538984_4539755_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644685.1\|4539802_4541161_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_096987256.1\|4541232_4541988_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_001295200.1\|4542021_4542744_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917883.1\|4542740_4543208_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001366128.1\|4543272_4544004_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	7.6e-40	38.6
WP_096987257.1\|4544540_4545326_+	hypothetical protein	NA	NA	NA	NA
WP_001236645.1\|4545462_4545942_-	hypothetical protein	NA	NA	NA	NA
WP_000908052.1\|4545951_4546866_-	hypothetical protein	NA	NA	NA	NA
WP_096987258.1\|4546909_4547392_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_096987210.1\|4547415_4548768_-	hypothetical protein	NA	NA	NA	NA
WP_123000017.1\|4548778_4552213_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_022645208.1\|4552321_4553737_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_022645209.1\|4553741_4554485_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_097291454.1\|4554481_4557241_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	4.2e-83	29.2
WP_096987212.1\|4557249_4558011_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_022645212.1\|4558015_4559347_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_001080149.1\|4559349_4559874_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_001113710.1\|4559870_4561151_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_063815230.1\|4561175_4562258_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_096987213.1\|4562221_4564072_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_022645215.1\|4564075_4564489_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_022645216.1\|4564495_4565971_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000123970.1\|4566021_4566246_-	hypothetical protein	NA	NA	NA	NA
WP_096944962.1\|4566280_4566781_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_001142958.1\|4567477_4567996_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_097415253.1\|4568205_4570314_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.1e-25	24.8
WP_097291528.1\|4574795_4575005_+	hypothetical protein	NA	NA	NA	NA
WP_106901776.1\|4575297_4576434_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

4630731 : 4713321

Shigella_phage(49.15%)

portal,terminase,capsid,tail,holin,plate,integrase,protease,head

attL 4622491:4622507|attR 4651553:4651569

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4622491:4622507	attL	NA	NA	NA	NA
WP_000749879.1\|4630731_4631787_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	4.5e-118	60.9
WP_001285288.1\|4632074_4633178_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_022645230.1\|4633189_4634443_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	3.4e-96	47.5
WP_000051887.1\|4634647_4635811_-\|integrase	site-specific integrase	U5P434	Shigella_phage	2.4e-229	100.0
WP_077873866.1\|4635687_4636122_-	helix-turn-helix domain-containing protein	U5P4J3	Shigella_phage	6.4e-79	100.0
WP_089538370.1\|4636037_4636382_-	DNA-binding protein	U5P0J0	Shigella_phage	2.0e-30	80.7
WP_000335007.1\|4636378_4637257_-	phosphoadenosine phosphosulfate reductase family protein	A0A2R2Z314	Escherichia_phage	6.3e-166	93.1
WP_000008187.1\|4637247_4637784_-	5'-deoxynucleotidase	A5LH62	Enterobacteria_phage	1.8e-99	98.9
WP_000081287.1\|4637911_4638736_-	DUF2303 family protein	U5P439	Shigella_phage	6.0e-150	100.0
WP_000135682.1\|4638801_4639164_-	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_000917896.1\|4639764_4640061_-	hypothetical protein	Q8SBF7	Shigella_phage	1.2e-52	100.0
WP_000848748.1\|4640233_4640908_-	LexA family transcriptional repressor	U5P0T5	Shigella_phage	1.2e-132	100.0
WP_000649480.1\|4640998_4641199_+	transcriptional regulator	U5P445	Shigella_phage	1.9e-30	98.5
WP_000515830.1\|4641242_4641794_+	protein YmfL	S5FXP0	Shigella_phage	2.2e-100	98.4
WP_001250269.1\|4641969_4642149_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_106901778.1\|4642138_4643080_+	helix-turn-helix domain-containing protein	S5FM81	Shigella_phage	1.9e-144	99.7
WP_001573323.1\|4643076_4643571_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	6.2e-86	97.5
WP_000210170.1\|4643570_4643897_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_000767111.1\|4643893_4644283_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	3.5e-68	99.2
WP_001061397.1\|4644302_4645100_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	4.4e-150	99.6
WP_032249117.1\|4645107_4646097_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.8e-194	99.1
WP_001205460.1\|4646114_4646456_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.2e-57	90.3
WP_001131905.1\|4646468_4647017_-	hypothetical protein	NA	NA	NA	NA
WP_106901779.1\|4647003_4647930_-	hypothetical protein	NA	NA	NA	NA
WP_000917724.1\|4648194_4648398_+	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000799659.1\|4648548_4649601_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	6.8e-207	99.1
WP_001120490.1\|4649677_4650004_+\|holin	phage holin, lambda family	U5P0K7	Shigella_phage	2.6e-56	98.1
WP_001524097.1\|4650007_4650484_+	glycoside hydrolase family 104 protein	S5FV07	Shigella_phage	1.2e-86	96.2
WP_106901780.1\|4650467_4650860_+	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	9.7e-50	83.7
WP_000651448.1\|4651106_4651427_+	hypothetical protein	NA	NA	NA	NA
WP_106901781.1\|4651522_4651873_+	HNH endonuclease	M1FQV2	Enterobacteria_phage	3.1e-63	96.6
4651553:4651569	attR	NA	NA	NA	NA
WP_147590313.1\|4651998_4652493_+\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	2.5e-87	98.2
WP_147590322.1\|4652726_4654223_+\|terminase	terminase large subunit	A0A1C9IIA1	Salmonella_phage	1.5e-297	99.2
WP_000605606.1\|4654234_4654417_+	hypothetical protein	S5FXQ9	Shigella_phage	1.7e-25	100.0
WP_105516875.1\|4654416_4655658_+\|portal	phage portal protein	U5P411	Shigella_phage	2.2e-241	99.0
WP_001193631.1\|4655635_4656286_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	2.5e-119	100.0
WP_106901784.1\|4656300_4657506_+\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	5.3e-224	99.8
WP_000601365.1\|4657555_4657756_+	hypothetical protein	S5FNU1	Shigella_phage	3.4e-27	100.0
WP_000927711.1\|4657758_4658082_+\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	1.1e-56	99.1
WP_000702388.1\|4658078_4658489_+\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	5.9e-74	97.8
WP_000213504.1\|4658463_4658970_+	hypothetical protein	M1FPE2	Enterobacteria_phage	6.3e-86	95.2
WP_106901785.1\|4658966_4659527_+	hypothetical protein	M1FQV7	Enterobacteria_phage	6.8e-105	99.5
WP_000497753.1\|4659535_4659706_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	2.7e-25	98.2
WP_001764254.1\|4659689_4661186_+	hypothetical protein	M1FN90	Enterobacteria_phage	1.7e-275	100.0
WP_000090998.1\|4661185_4661542_+	hypothetical protein	U5P076	Shigella_phage	5.3e-63	100.0
WP_000661047.1\|4661541_4661811_+\|tail	phage tail assembly protein	S5FNR3	Shigella_phage	3.5e-43	100.0
WP_106901786.1\|4661952_4663788_+\|tail	phage tail tape measure protein	Q8SBG9	Shigella_phage	4.5e-307	99.5
WP_147590315.1\|4663848_4665177_+	DNA circularization protein	Q8SBG8	Shigella_phage	5.5e-246	98.9
WP_047668520.1\|4665173_4666253_+\|plate	baseplate protein	U5P0H6	Shigella_phage	5.9e-206	99.7
WP_096305467.1\|4666252_4666801_+\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	9.6e-96	97.8
WP_130526343.1\|4666800_4667226_+\|tail	phage tail protein	U5P0R9	Shigella_phage	6.7e-81	99.3
WP_106901788.1\|4667212_4668271_+\|plate	baseplate J/gp47 family protein	U5P424	Shigella_phage	3.6e-200	98.3
WP_000383548.1\|4668261_4668846_+	YmfQ family protein	O22003	Shigella_phage	1.1e-113	100.0
WP_106423022.1\|4668972_4669491_+	hypothetical protein	M1FN94	Enterobacteria_phage	1.8e-43	71.9
WP_001407366.1\|4669512_4669953_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.6e-53	69.7
WP_000904981.1\|4671036_4671591_+	site-specific DNA recombinase	A0A1S6L009	Salmonella_phage	1.7e-87	87.8
WP_000355484.1\|4671648_4672422_-	hypothetical protein	G9IA57	Pseudomonas_phage	2.4e-36	38.5
WP_040073705.1\|4673133_4674969_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_001019920.1\|4675941_4676556_+	YagU family protein	NA	NA	NA	NA
WP_001303809.1\|4676805_4677135_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_096986496.1\|4677447_4678158_-	hypothetical protein	NA	NA	NA	NA
WP_096986497.1\|4678126_4679770_-	fimbrial adhesin EcpD	NA	NA	NA	NA
WP_096986498.1\|4679759_4682285_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_000716409.1\|4682310_4682979_-	fimbrial chaperone EcpB	NA	NA	NA	NA
WP_000730982.1\|4683036_4683624_-	common pilus major fimbrillin subunit EcpA	NA	NA	NA	NA
WP_000389022.1\|4683698_4684241_-	ECP biosynthesis operon DNA-binding transcriptional regulator EcpR	NA	NA	NA	NA
WP_000866436.1\|4685324_4685465_-	50S ribosomal protein L36	NA	NA	NA	NA
WP_000803998.1\|4685464_4685728_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000662258.1\|4686092_4686194_-	hypothetical protein	NA	NA	NA	NA
WP_000182338.1\|4686667_4687810_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_000860025.1\|4688054_4688975_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001328123.1\|4689131_4690058_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012311907.1\|4690257_4691151_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001172285.1\|4691181_4692171_-	aldo/keto reductase	NA	NA	NA	NA
WP_001174452.1\|4692197_4693049_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.2e-47	40.7
WP_096986500.1\|4693614_4697868_+	intimin-like adhesin FdeC	NA	NA	NA	NA
WP_001361804.1\|4697988_4698846_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001361805.1\|4699093_4699963_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.6e-52	41.7
WP_001361806.1\|4700124_4700718_-	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_000474078.1\|4700729_4700966_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_096986501.1\|4701074_4702400_-	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.6e-112	47.4
WP_096986502.1\|4702626_4703481_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096986503.1\|4704006_4704726_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_024704922.1\|4704736_4706164_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_000370410.1\|4706156_4706852_+	lactate utilization protein C	NA	NA	NA	NA
WP_096986504.1\|4707383_4709072_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	3.1e-60	31.1
WP_096986505.1\|4709085_4710558_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001295807.1\|4710571_4711159_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_096986506.1\|4711287_4713321_+\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	4.4e-21	27.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP027448

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4878 : 92228

Stx2-converting_phage(35.71%)

integrase,transposase,protease

attL 25156:25184|attR 71386:71414

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_106901803.1\|4878_5901_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000501973.1\|6195_6681_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001352814.1\|6668_6953_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_106901861.1\|7343_8831_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_106901804.1\|8935_9883_-\|protease	omptin family outer membrane protease OmpP	NA	NA	NA	NA
WP_106901805.1\|10696_11122_+\|transposase	transposase	Q6H9S5	Enterobacteria_phage	7.3e-35	76.3
WP_000624720.1\|11118_11469_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	6.2e-40	66.4
WP_061348415.1\|13293_14730_-	alpha-hemolysin T1SS ABC transporter subunit HlyD	NA	NA	NA	NA
WP_106901806.1\|14748_16872_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	2.9e-47	29.9
WP_106901807.1\|16943_20012_-	RTX toxin hemolysin HlyA	NA	NA	NA	NA
WP_021569014.1\|20023_20536_-	alpha-hemolysin-activating lysine-acyltransferase HlyC	NA	NA	NA	NA
WP_106901808.1\|25064_25148_-	hypothetical protein	NA	NA	NA	NA
25156:25184	attL	NA	NA	NA	NA
WP_106901809.1\|26369_27347_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.4e-100	59.8
WP_001066941.1\|27589_28330_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	1.6e-24	57.6
WP_106901862.1\|28450_28621_-	transcriptional regulator	NA	NA	NA	NA
WP_106901810.1\|30069_35007_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_069917678.1\|35718_36411_+	hypothetical protein	NA	NA	NA	NA
WP_064734886.1\|38700_39375_-	hypothetical protein	NA	NA	NA	NA
WP_032215196.1\|39866_42080_+	catalase/peroxidase HPI	NA	NA	NA	NA
WP_032215195.1\|42125_42515_+	cytochrome b562 family protein	NA	NA	NA	NA
WP_069907188.1\|44202_44907_-	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_032215191.1\|47120_47309_+	hypothetical protein	NA	NA	NA	NA
WP_032215190.1\|47910_48324_+	hypothetical protein	NA	NA	NA	NA
WP_032215189.1\|48330_48909_+	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_069907187.1\|49054_49471_+	hypothetical protein	NA	NA	NA	NA
WP_069904603.1\|49581_50637_+	EAL domain-containing protein	NA	NA	NA	NA
WP_106901811.1\|52891_56422_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_106901812.1\|56433_57609_-	autotransporter strand-loop-strand O-heptosyltransferase	NA	NA	NA	NA
WP_032215042.1\|59970_60225_-	hypothetical protein	NA	NA	NA	NA
WP_077756518.1\|60363_60531_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_032215041.1\|61834_62569_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_159032886.1\|63914_64010_-	hypothetical protein	NA	NA	NA	NA
WP_159032887.1\|63963_64161_+	hypothetical protein	NA	NA	NA	NA
WP_106901814.1\|64398_65073_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	9.5e-13	31.6
WP_032215038.1\|65069_65417_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.5e-43	72.0
WP_072126895.1\|67036_67189_+	anaerobic sulfite reductase subunit C	NA	NA	NA	NA
WP_089513792.1\|67338_71238_-	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA54	Enterobacteria_phage	1.3e-167	32.1
WP_147590341.1\|71445_71667_-\|transposase	IS3 family transposase	NA	NA	NA	NA
71386:71414	attR	NA	NA	NA	NA
WP_106901815.1\|71690_72200_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.4e-21	50.5
WP_106901816.1\|72196_72478_-	hypothetical protein	NA	NA	NA	NA
WP_106901817.1\|72621_72978_-\|transposase	transposase	NA	NA	NA	NA
WP_159032888.1\|74546_75887_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-18	37.0
WP_069906978.1\|76214_76865_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.4e-15	40.9
WP_069906977.1\|76864_77212_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	1.7e-45	75.7
WP_106901819.1\|78838_79282_+	hypothetical protein	NA	NA	NA	NA
WP_069907038.1\|80607_80838_-	hypothetical protein	NA	NA	NA	NA
WP_069907037.1\|81584_82109_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_106901821.1\|82165_84568_+	F4 (K88) fimbrial usher FaeD	NA	NA	NA	NA
WP_069907035.1\|84560_85352_+	F4 (K88) fimbrial chaperone FaeE	NA	NA	NA	NA
WP_069907034.1\|85386_85878_+	F4 (K88) fimbria minor subunit FaeF	NA	NA	NA	NA
WP_069907033.1\|86116_86887_+	hypothetical protein	NA	NA	NA	NA
WP_069907032.1\|87114_87912_+	F4 (K88) fimbria minor subunit FaeH	NA	NA	NA	NA
WP_069907031.1\|87942_88707_+	F4 (K88) fimbria minor subunit FaeI	NA	NA	NA	NA
WP_077888280.1\|89060_89396_+	hypothetical protein	NA	NA	NA	NA
WP_106901822.1\|90028_91255_+	phosphoadenosine phosphosulfate reductase	A0A068F1U8	Mycobacterium_phage	1.4e-62	32.9
WP_106901823.1\|91239_91884_+	ParB N-terminal domain-containing protein	A0A0F7L444	uncultured_marine_virus	9.6e-55	51.5
WP_106901824.1\|91892_92228_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027447

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP027448

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection