CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP027456	Escherichia coli strain 2014C-4423 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0
NZ_CP027454	Escherichia coli strain 2014C-4423 chromosome, complete genome	2 crisprs	csa3,cas3,DEDDh,DinG,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	8	19
NZ_CP027455	Escherichia coli strain 2014C-4423 plasmid unnamed1, complete sequence	0 crisprs	NA	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027454_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027454_1

4777437-4777649

TypeI-E

I-E

Consensus_repeat	Method
GCGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
GCGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
GCGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

3 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP027454_1

>merge|NZ_CP027454|1|4777437-4777649|CRISPRCasFinder,CRT,PILER-CR
CCGGTTTATCCCCGCTGGCGCGGGGAACACTCACGCGCTGTTACCCAGTCCCTTTTTTTCAGCGGTTTATCCCCGCTGGCGCGGGGAACACTACAGGAAAGAATCCGCCAACGGCGACAGGGGCGGTTTATCCCCGCTGGCGCGGGGAACACGAATATCCACCCGTCCTGTATTCCGCCAATTGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP027454|1|1|4777437-4777649|CRISPRCasFinder
CCGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACGCGCTGTTACCCAGTCCCTTTTTTTCA
GCGGTTTATCCCCGCTGGCGCGGGGAACAC	TACAGGAAAGAATCCGCCAACGGCGACAGGG
GCGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATATCCACCCGTCCTGTATTCCGCCAATT
GCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP027454|1|1|4777437-4777649|CRT
CCGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACGCGCTGTTACCCAGTCCCTTTTTTTCA
GCGGTTTATCCCCGCTGGCGCGGGGAACAC	TACAGGAAAGAATCCGCCAACGGCGACAGGG
GCGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATATCCACCCGTCCTGTATTCCGCCAATT
GCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP027454|1|1|4777438-4777649|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACACT	CACGCGCTGTTACCCAGTCCCTTTTTTTCAG
CGGTTTATCCCCGCTGGCGCGGGGAACACT	ACAGGAAAGAATCCGCCAACGGCGACAGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACACG	AATATCCACCCGTCCTGTATTCCGCCAATTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027454.1\|WP_001246104.1\|4772751_4773075_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP027454.1\|WP_000085039.1\|4779587_4780334_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP027454.1\|WP_000568943.1\|4769992_4771042_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP027454.1\|WP_096910863.1\|4784203_4785417_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP027454.1\|WP_001084111.1\|4781944_4783507_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP027454.1\|WP_000372392.1\|4775158_4776067_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP027454.1\|WP_000029326.1\|4781411_4781948_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP027454.1\|WP_000206428.1\|4780344_4781400_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP027454.1\|WP_001370170.1\|4787808_4787961_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP027454.1\|WP_000144856.1\|4778038_4778959_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP027454.1\|WP_000063176.1\|4777745_4778039_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP027454.1\|WP_001295182.1\|4769250_4770012_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP027454.1\|WP_000246142.1\|4771517_4772228_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP027454.1\|WP_001219242.1\|4771038_4771518_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP027454.1\|WP_001090329.1\|4773729_4775157_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP027454.1\|WP_001173673.1\|4773124_4773730_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP027454.1\|WP_000039845.1\|4788225_4788960_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP027454.1\|WP_000490402.1\|4776318_4777356_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP027454.1\|WP_000517476.1\|4772246_4772558_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP027454.1\|WP_000281441.1\|4778955_4779606_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869

Protein	Function_ID	Function_description	E-value
NZ_CP027454.1\|WP_001246104.1\|4772751_4773075_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP027454.1\|WP_000085039.1\|4779587_4780334_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.7086e-49
NZ_CP027454.1\|WP_000568943.1\|4769992_4771042_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP027454.1\|WP_096910863.1\|4784203_4785417_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.95436e-154
NZ_CP027454.1\|WP_001084111.1\|4781944_4783507_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP027454.1\|WP_000372392.1\|4775158_4776067_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP027454.1\|WP_000029326.1\|4781411_4781948_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	3.75621e-29
NZ_CP027454.1\|WP_000206428.1\|4780344_4781400_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.81491e-155
NZ_CP027454.1\|WP_001370170.1\|4787808_4787961_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	1.37085e-11
NZ_CP027454.1\|WP_000144856.1\|4778038_4778959_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.23225e-157
NZ_CP027454.1\|WP_000063176.1\|4777745_4778039_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
NZ_CP027454.1\|WP_001295182.1\|4769250_4770012_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP027454.1\|WP_000246142.1\|4771517_4772228_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.35701e-120
NZ_CP027454.1\|WP_001219242.1\|4771038_4771518_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP027454.1\|WP_001090329.1\|4773729_4775157_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP027454.1\|WP_001173673.1\|4773124_4773730_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP027454.1\|WP_000039845.1\|4788225_4788960_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.51978e-137
NZ_CP027454.1\|WP_000490402.1\|4776318_4777356_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP027454.1\|WP_000517476.1\|4772246_4772558_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP027454.1\|WP_000281441.1\|4778955_4779606_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	7.45532e-92

>NZ_CP027454.1|WP_000490402.1|4776318_4777356_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP027454.1|WP_000372392.1|4775158_4776067_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP027454.1|WP_001090329.1|4773729_4775157_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSLLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARIDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVASSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP027454.1|WP_001173673.1|4773124_4773730_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP027454.1|WP_001246104.1|4772751_4773075_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP027454.1|WP_000517476.1|4772246_4772558_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP027454.1|WP_000246142.1|4771517_4772228_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLVRLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP027454.1|WP_001219242.1|4771038_4771518_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP027454.1|WP_000568943.1|4769992_4771042_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP027454.1|WP_001295182.1|4769250_4770012_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP027454.1|WP_000063176.1|4777745_4778039_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP027454.1|WP_000144856.1|4778038_4778959_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSIKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRG
>NZ_CP027454.1|WP_000281441.1|4778955_4779606_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP027454.1|WP_000085039.1|4779587_4780334_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGGDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
>NZ_CP027454.1|WP_000206428.1|4780344_4781400_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEDKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP027454.1|WP_000029326.1|4781411_4781948_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNASVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP027454.1|WP_001084111.1|4781944_4783507_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDISAPRADLQGAVWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWINVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDEQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLDKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARDDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVDLERVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP027454.1|WP_096910863.1|4784203_4785417_-|IS3-family-transposase
MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLTGVLRGKKVRTTVSRKAVAAGDRVNRQFVAERPDQLWVADFTWVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETAFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKRWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYASIGNNDLAA
>NZ_CP027454.1|WP_001370170.1|4787808_4787961_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTRYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP027454.1|WP_000039845.1|4788225_4788960_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKYGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP027454_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027454_2

4804659-4804993

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
GGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGCCGGTTTATCCCCGCTGGCGCGGGGAACTCT	PILER-CR

5 spacers

The CRISPR arrays of NZ_CP027454_2

>merge|NZ_CP027454|2|4804659-4804993|CRT,CRISPRCasFinder,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAACTCATATACAGCAAACCTTCAGAATGCATTCCGGACGGTTTATCCCCGCTGGCGCGGGGAACTCGTGACCGTCGGTGTTACGCTGAACTGCTGAAACGGTTTATCCCCGCTGGCGCGGGGAACTCAATATTTGCAACACCCGCAAGAACATCAACGCCGGTTTATCCCCGCTGGCGCGGGGAACTCTTGCATCATTTTTGTACACGTCGAGCTTCCCCCGGTTTATCCCCGCTAGCGCGGGGAACTCCGCGTTGAAAGCGCGAGCGCGTTAGCTGACGACGGTTTATCCCCGCTGGCGCGGGGAACTCT

>NZ_CP027454|2|2|4804659-4804992|CRT
TGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATACAGCAAACCTTCAGAATGCATTCCGGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GTGACCGTCGGTGTTACGCTGAACTGCTGAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AATATTTGCAACACCCGCAAGAACATCAACGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTGCATCATTTTTGTACACGTCGAGCTTCCCC
CGGTTTATCCCCGCTAGCGCGGGGAACTC	CGCGTTGAAAGCGCGAGCGCGTTAGCTGACGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP027454|2|2|4804660-4804992|CRISPRCasFinder
GGTTTATCCCCGCTGGCGCGGGGAACTC	ATATACAGCAAACCTTCAGAATGCATTCCGGAC
GGTTTATCCCCGCTGGCGCGGGGAACTC	GTGACCGTCGGTGTTACGCTGAACTGCTGAAAC
GGTTTATCCCCGCTGGCGCGGGGAACTC	AATATTTGCAACACCCGCAAGAACATCAACGCC
GGTTTATCCCCGCTGGCGCGGGGAACTC	TTGCATCATTTTTGTACACGTCGAGCTTCCCCC
GGTTTATCCCCGCTAGCGCGGGGAACTC	CGCGTTGAAAGCGCGAGCGCGTTAGCTGACGAC
GGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP027454|2|2|4804839-4804993|PILER-CR
CGCCGGTTTATCCCCGCTGGCGCGGGGAACTCT	TGCATCATTTTTGTACACGTCGAGCTTC
CCCCGGTTTATCCCCGCTAGCGCGGGGAACTCC	GCGTTGAAAGCGCGAGCGCGTTAGCTGA
CGACGGTTTATCCCCGCTGGCGCGGGGAACTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027454.1\|WP_001098105.1\|4797179_4798517_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP027454.1\|WP_001299652.1\|4796422_4797202_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP027454.1\|WP_000210891.1\|4808614_4810252_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP027454.1\|WP_000186458.1\|4815642_4818399_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP027454.1\|WP_000059313.1\|4798610_4800065_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP027454.1\|WP_000036723.1\|4807228_4808527_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP027454.1\|WP_001071630.1\|4810479_4811271_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP027454.1\|WP_000109367.1\|4794565_4794826_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP027454.1\|WP_001299097.1\|4795565_4796426_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP027454.1\|WP_000039753.1\|4802541_4804020_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP027454.1\|WP_001370272.1\|4793303_4794575_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP027454.1\|WP_001130251.1\|4794842_4795418_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP027454.1\|WP_000021321.1\|4800134_4800920_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP027454.1\|WP_001288227.1\|4806141_4806282_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027454.1\|WP_000581937.1\|4811676_4811925_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP027454.1\|WP_000254738.1\|4811341_4811677_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP027454.1\|WP_001164578.1\|4801237_4802515_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP027454.1\|WP_000226823.1\|4812002_4814237_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP027454.1\|WP_001199970.1\|4805331_4806003_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP027454.1\|WP_000046788.1\|4814284_4815586_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291

Protein	Function_ID	Function_description	E-value
NZ_CP027454.1\|WP_001098105.1\|4797179_4798517_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
NZ_CP027454.1\|WP_001299652.1\|4796422_4797202_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP027454.1\|WP_000210891.1\|4808614_4810252_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP027454.1\|WP_000186458.1\|4815642_4818399_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP027454.1\|WP_000059313.1\|4798610_4800065_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	3.63855e-81
NZ_CP027454.1\|WP_000036723.1\|4807228_4808527_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP027454.1\|WP_001071630.1\|4810479_4811271_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	6.1163e-159
NZ_CP027454.1\|WP_000109367.1\|4794565_4794826_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	8.55479e-42
NZ_CP027454.1\|WP_001299097.1\|4795565_4796426_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP027454.1\|WP_000039753.1\|4802541_4804020_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.84635e-108
NZ_CP027454.1\|WP_001370272.1\|4793303_4794575_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	1.48624e-125
NZ_CP027454.1\|WP_001130251.1\|4794842_4795418_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	1.19171e-86
NZ_CP027454.1\|WP_000021321.1\|4800134_4800920_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP027454.1\|WP_000581937.1\|4811676_4811925_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP027454.1\|WP_000254738.1\|4811341_4811677_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP027454.1\|WP_001164578.1\|4801237_4802515_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.84544e-29
NZ_CP027454.1\|WP_000226823.1\|4812002_4814237_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP027454.1\|WP_001199970.1\|4805331_4806003_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.73859e-155
NZ_CP027454.1\|WP_000046788.1\|4814284_4815586_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0

>NZ_CP027454.1|WP_000039753.1|4802541_4804020_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPYADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP027454.1|WP_001164578.1|4801237_4802515_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSIIGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP027454.1|WP_000021321.1|4800134_4800920_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP027454.1|WP_000059313.1|4798610_4800065_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQYQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFLHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP027454.1|WP_001098105.1|4797179_4798517_-|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP027454.1|WP_001299652.1|4796422_4797202_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP027454.1|WP_001299097.1|4795565_4796426_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP027454.1|WP_001130251.1|4794842_4795418_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECLFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP027454.1|WP_000109367.1|4794565_4794826_+|ferredoxin-family-protein
MSVAHNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP027454.1|WP_001370272.1|4793303_4794575_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFALYHHNVERSLLWDILQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPVPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL
>NZ_CP027454.1|WP_001199970.1|4805331_4806003_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP027454.1|WP_001288227.1|4806141_4806282_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFIQI
>NZ_CP027454.1|WP_000036723.1|4807228_4808527_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP027454.1|WP_000210891.1|4808614_4810252_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGISAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP027454.1|WP_001071630.1|4810479_4811271_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQLVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP027454.1|WP_000254738.1|4811341_4811677_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP027454.1|WP_000581937.1|4811676_4811925_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP027454.1|WP_000226823.1|4812002_4814237_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFYDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP027454.1|WP_000046788.1|4814284_4815586_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQAIRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLAKQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP027454.1|WP_000186458.1|4815642_4818399_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESQLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027454_2	2.2\|4804749\|32\|NZ_CP027454\|CRT	4804749-4804780	32	CP054922	Streptomyces sp. NA03103 plasmid unnamed2, complete sequence	68158-68189	6	0.812
NZ_CP027454_2	2.3\|4804810\|32\|NZ_CP027454\|CRT	4804810-4804841	32	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	116689-116720	6	0.812
NZ_CP027454_2	2.3\|4804810\|32\|NZ_CP027454\|CRT	4804810-4804841	32	MH460462	Dickeya phage vB_DsoM_JA33, complete genome	116679-116710	6	0.812
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_AP022602	Mycobacterium gallinarum strain JCM 6399 plasmid pJCM6399	61999-62029	7	0.774
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_AP022602	Mycobacterium gallinarum strain JCM 6399 plasmid pJCM6399	61999-62029	7	0.774
NZ_CP027454_2	2.8\|4804810\|33\|NZ_CP027454\|CRISPRCasFinder	4804810-4804842	33	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	116689-116721	7	0.788
NZ_CP027454_2	2.8\|4804810\|33\|NZ_CP027454\|CRISPRCasFinder	4804810-4804842	33	MH460462	Dickeya phage vB_DsoM_JA33, complete genome	116679-116711	7	0.788
NZ_CP027454_1	1.1\|4777467\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777467-4777497	31	NZ_CP026601	Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence	97057-97087	8	0.742
NZ_CP027454_1	1.4\|4777468\|31\|NZ_CP027454\|PILER-CR	4777468-4777498	31	NZ_CP026601	Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence	97057-97087	8	0.742
NZ_CP027454_2	2.12\|4804933\|28\|NZ_CP027454\|PILER-CR	4804933-4804960	28	HG796329	Uncultured bacterium plasmid pRGI00478	3104-3131	8	0.714
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP026242	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence	168728-168758	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP009883	Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence	5480-5510	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP010380	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence	100872-100902	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP026171	Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence	69668-69698	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP026196	Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence	140212-140242	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_AP021845	Azospira sp. I09 plasmid pAZI09, complete sequence	335649-335679	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	CP009869	Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence	51817-51847	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP042479	Citrobacter freundii strain C50 plasmid pC50_001, complete sequence	136820-136850	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP026208	Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence	50052-50082	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	65507-65537	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP026391	Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence	6461-6491	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP029142	Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence	256680-256710	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	47915-47945	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	9471-9501	9	0.71
NZ_CP027454_1	1.2\|4777528\|31\|NZ_CP027454\|CRISPRCasFinder,CRT	4777528-4777558	31	NZ_CP044111	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2	384418-384448	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP026242	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence	168728-168758	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP009883	Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence	5480-5510	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP010380	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence	100872-100902	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP026171	Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence	69668-69698	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP026196	Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence	140212-140242	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_AP021845	Azospira sp. I09 plasmid pAZI09, complete sequence	335649-335679	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	CP009869	Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence	51817-51847	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP042479	Citrobacter freundii strain C50 plasmid pC50_001, complete sequence	136820-136850	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP026208	Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence	50052-50082	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	65507-65537	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP026391	Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence	6461-6491	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP029142	Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence	256680-256710	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	47915-47945	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	9471-9501	9	0.71
NZ_CP027454_1	1.5\|4777529\|31\|NZ_CP027454\|PILER-CR	4777529-4777559	31	NZ_CP044111	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2	384418-384448	9	0.71
NZ_CP027454_2	2.3\|4804810\|32\|NZ_CP027454\|CRT	4804810-4804841	32	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	712830-712861	9	0.719

1. spacer 2.2|4804749|32|NZ_CP027454|CRT matches to CP054922 (Streptomyces sp. NA03103 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

gtgaccgtcggtgttacgctgaactgctgaaa--	CRISPR spacer
gtgaccgtcggtgttccggtgaa--gcggaaggc	Protospacer
*************** ** ****  ** ***.

2. spacer 2.3|4804810|32|NZ_CP027454|CRT matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 6, identity: 0.812

aatatttgcaacacccgcaagaacatcaacgc	CRISPR spacer
tttacctgcaacacctgcaagcacatcaacgc	Protospacer
  **..*********.***** **********

3. spacer 2.3|4804810|32|NZ_CP027454|CRT matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 6, identity: 0.812

aatatttgcaacacccgcaagaacatcaacgc	CRISPR spacer
tttacctgcaacacctgcaagcacatcaacgc	Protospacer
  **..*********.***** **********

4. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_AP022602 (Mycobacterium gallinarum strain JCM 6399 plasmid pJCM6399) position: , mismatch: 7, identity: 0.774

tacaggaa---agaatccgccaacggcgacaggg	CRISPR spacer
---atgcacccagaatccgccaccggcgaccggg	Protospacer
   * * *   *********** ******* ***

5. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_AP022602 (Mycobacterium gallinarum strain JCM 6399 plasmid pJCM6399) position: , mismatch: 7, identity: 0.774

tacaggaa---agaatccgccaacggcgacaggg	CRISPR spacer
---atgcacccagaatccgccaccggcgaccggg	Protospacer
   * * *   *********** ******* ***

6. spacer 2.8|4804810|33|NZ_CP027454|CRISPRCasFinder matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 7, identity: 0.788

aatatttgcaacacccgcaagaacatcaacgcc	CRISPR spacer
tttacctgcaacacctgcaagcacatcaacgct	Protospacer
  **..*********.***** **********.

7. spacer 2.8|4804810|33|NZ_CP027454|CRISPRCasFinder matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 7, identity: 0.788

aatatttgcaacacccgcaagaacatcaacgcc	CRISPR spacer
tttacctgcaacacctgcaagcacatcaacgct	Protospacer
  **..*********.***** **********.

8. spacer 1.1|4777467|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcacgcgctgttacccagtccctttttttca	CRISPR spacer
tcttataatgttatccagtacctttttttca	Protospacer
** .... *****.***** ***********

9. spacer 1.4|4777468|31|NZ_CP027454|PILER-CR matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

tcacgcgctgttacccagtccctttttttca	CRISPR spacer
tcttataatgttatccagtacctttttttca	Protospacer
** .... *****.***** ***********

10. spacer 2.12|4804933|28|NZ_CP027454|PILER-CR matches to HG796329 (Uncultured bacterium plasmid pRGI00478) position: , mismatch: 8, identity: 0.714

gcgttgaaagcgcgagcgcgttagctga	CRISPR spacer
tttcaacaagcgcaagcgcgttagctga	Protospacer
 . . . ******.**************

11. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP026242 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

12. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP009883 (Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

13. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

14. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP026171 (Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

15. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP026196 (Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

16. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

17. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

18. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP042479 (Citrobacter freundii strain C50 plasmid pC50_001, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

19. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP026208 (Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

20. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

21. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP026391 (Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

22. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

23. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

24. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

25. spacer 1.2|4777528|31|NZ_CP027454|CRISPRCasFinder,CRT matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

26. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP026242 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

27. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP009883 (Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

28. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

29. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP026171 (Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

30. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP026196 (Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

31. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

32. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

33. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP042479 (Citrobacter freundii strain C50 plasmid pC50_001, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

34. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP026208 (Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

35. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

36. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP026391 (Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

37. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

38. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

39. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

40. spacer 1.5|4777529|31|NZ_CP027454|PILER-CR matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 9, identity: 0.71

tacaggaaagaatccgccaacggcgacaggg	CRISPR spacer
gcgaggaaagaagccgccgacggcgaggacg	Protospacer
   ********* *****.******* .. *

41. spacer 2.3|4804810|32|NZ_CP027454|CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aatatttgcaacacccgcaagaacatcaacgc	CRISPR spacer
agccagttcagcaccagcaagaacatcaacga	Protospacer
*..   * **.**** ***************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

970335 : 1021788

Enterobacteria_phage(36.84%)

tail,transposase,holin,terminase,portal,capsid,tRNA,integrase,head

attL 981215:981229|attR 1022390:1022404

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001093921.1\|970335_970617_-	hypothetical protein	K7PGU0	Enterobacteria_phage	4.1e-42	95.7
WP_001061339.1\|970653_971226_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	6.7e-108	97.9
WP_001094871.1\|971225_971960_-	DUF551 domain-containing protein	S5MC19	Escherichia_phage	1.4e-139	98.8
WP_001014294.1\|971962_972154_-	hypothetical protein	G9L660	Escherichia_phage	9.5e-27	100.0
WP_000829413.1\|972155_972623_-	hypothetical protein	A0A076GCN9	Escherichia_phage	1.1e-36	72.1
WP_000145671.1\|972769_973243_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	4.0e-66	75.5
WP_001242740.1\|973239_973590_-	hypothetical protein	A0A0P0ZBF8	Stx2-converting_phage	1.6e-56	94.8
WP_000008211.1\|973580_974117_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	3.1e-99	98.3
WP_000081294.1\|974244_975069_-	YfdQ family protein	Q8SBF9	Shigella_phage	3.5e-150	100.0
WP_000135680.1\|975134_975497_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_000981537.1\|975954_976608_-	helix-turn-helix domain-containing protein	K7PLZ5	Enterobacterial_phage	5.7e-71	60.8
WP_001231956.1\|976703_976901_+	hypothetical protein	K7PHB1	Enterobacterial_phage	1.1e-14	56.9
WP_000514174.1\|976928_977513_+	hypothetical protein	A0A1C9II13	Salmonella_phage	5.5e-57	60.9
WP_001087349.1\|977509_978676_+	peptidase	A0A1C9IHV9	Salmonella_phage	3.6e-116	61.1
WP_000626861.1\|978672_978867_+	hypothetical protein	NA	NA	NA	NA
WP_000618008.1\|978863_979088_+	hypothetical protein	NA	NA	NA	NA
WP_000061545.1\|979084_979909_+	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	1.2e-89	78.4
WP_000988265.1\|979919_980819_+	ATP-binding protein	Q8W641	Enterobacteria_phage	8.8e-139	94.8
WP_000203855.1\|980815_982216_+	replicative DNA helicase	Q8W640	Enterobacteria_phage	6.4e-245	92.2
981215:981229	attL	NA	NA	NA	NA
WP_001370224.1\|982212_982470_+	hypothetical protein	Q8W639	Enterobacteria_phage	9.5e-22	71.1
WP_001370152.1\|982521_983511_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.3e-193	99.1
WP_085947772.1\|983949_985162_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
WP_096910863.1\|985218_986432_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.3e-166	97.3
WP_001339373.1\|987160_987313_+	restriction endonuclease subunit M	A0A2R2Z327	Escherichia_phage	3.4e-19	98.0
WP_000284522.1\|990147_990363_+\|holin	holin	Q6H9V8	Enterobacteria_phage	1.3e-32	97.2
WP_000731221.1\|990367_990712_+	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.8e-55	95.6
WP_000992088.1\|990762_991296_+	lysozyme	B6DZ92	Enterobacteria_phage	5.6e-101	98.3
WP_001056806.1\|991566_992136_+	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
WP_000539795.1\|992135_992282_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	1.1e-11	87.0
WP_001208680.1\|992504_992690_+	membrane protein	A0A1U9AJA4	Stx1_converting_phage	1.7e-20	80.3
WP_001302717.1\|993215_993530_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001303940.1\|993611_993836_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	1.7e-19	90.6
WP_000867498.1\|994222_994768_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	9.6e-80	83.3
WP_001027230.1\|994742_996668_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	98.1
WP_000198153.1\|996664_996871_+\|head,tail	head-tail joining protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
WP_024026143.1\|996867_998469_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	2.1e-308	98.9
WP_032212710.1\|998449_999769_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.6e-232	98.4
WP_001299443.1\|999778_1000111_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
WP_024025845.1\|1000166_1001192_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	9.9e-187	96.8
WP_000158899.1\|1001233_1001629_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.0e-55	92.4
WP_000753019.1\|1001640_1001994_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	2.6e-62	98.3
WP_024025847.1\|1002005_1002584_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	6.6e-79	97.9
WP_000683137.1\|1002580_1002976_+\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	3.7e-65	92.4
WP_000235098.1\|1002983_1003736_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	4.9e-135	99.2
WP_000479045.1\|1003749_1004172_+\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	1.7e-71	98.6
WP_000533440.1\|1004198_1004612_+\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	3.2e-43	83.2
WP_032212771.1\|1004592_1007205_+\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	87.8
WP_000847401.1\|1007201_1007531_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	6.0e-53	92.7
WP_001453992.1\|1007530_1008229_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	3.6e-132	98.7
WP_001370115.1\|1008234_1008978_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	5.0e-148	98.4
WP_077696211.1\|1008923_1009559_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	1.5e-97	88.5
WP_106901517.1\|1009794_1013187_+	host specificity protein J	Q687E8	Enterobacteria_phage	0.0e+00	87.0
WP_001230379.1\|1013253_1013853_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	2.6e-110	98.5
WP_032212803.1\|1013917_1015231_+\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	3.9e-79	99.3
WP_047091878.1\|1015232_1015502_+\|tail	phage tail protein	Q6H9S8	Enterobacteria_phage	4.2e-44	98.9
WP_001370116.1\|1015913_1016519_+	hypothetical protein	A0A0P0ZCT1	Stx2-converting_phage	1.8e-111	99.5
WP_001121225.1\|1016743_1017394_-	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	1.2e-121	99.1
WP_085948186.1\|1017650_1018807_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_001217539.1\|1019254_1019503_-	DinI family protein	A5LH55	Enterobacteria_phage	1.1e-38	100.0
WP_000332271.1\|1019564_1020662_-\|integrase	site-specific integrase	S5MDN5	Escherichia_phage	9.5e-212	99.7
WP_000543822.1\|1020750_1021788_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
1022390:1022404	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1111445 : 1194473

Stx2-converting_phage(22.73%)

tRNA,integrase,protease,transposase

attL 1115047:1115062|attR 1200701:1200716

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295082.1\|1111445_1112963_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.7e-87	38.0
WP_000856834.1\|1113199_1114657_-	dipeptide/tripeptide permease DtpC	A0A0P0IY73	Acinetobacter_phage	1.8e-48	29.6
WP_001295383.1\|1114715_1116863_-	lysine decarboxylase CadA	NA	NA	NA	NA
1115047:1115062	attL	NA	NA	NA	NA
WP_000092909.1\|1116942_1118277_-	cadaverine/lysine antiporter	NA	NA	NA	NA
WP_096910863.1\|1118468_1119681_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.3e-166	97.3
WP_001187182.1\|1119955_1121494_-	DNA-binding transcriptional activator CadC	NA	NA	NA	NA
WP_101329731.1\|1121728_1123267_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	4.3e-295	98.8
WP_000612591.1\|1123316_1123664_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_001171554.1\|1123660_1124041_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
WP_094185360.1\|1125152_1126309_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.8e-68	45.1
WP_000422707.1\|1126567_1126993_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.9e-47	97.9
WP_001239100.1\|1127646_1137318_-	lymphostatin Efa1/LifA	NA	NA	NA	NA
WP_000609742.1\|1139191_1139866_-	type III secretion system effector cysteine methyltransferase NleE	NA	NA	NA	NA
WP_000953032.1\|1139914_1140904_-	type III secretion system effector arginine glycosyltransferase NleB	Q8HAB2	Salmonella_phage	4.1e-97	58.2
WP_001121620.1\|1141512_1143162_-	ShET2/EspL2 family type III secretion system effector toxin	NA	NA	NA	NA
WP_085948186.1\|1145190_1146346_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_000603950.1\|1147411_1147960_+	Ail/Lom family outer membrane beta-barrel protein	Q9LA63	Enterobacterial_phage	1.3e-15	32.4
WP_000631725.1\|1150281_1150629_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001341423.1\|1150625_1151300_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_001218843.1\|1152290_1153556_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.7e-77	38.3
WP_001188520.1\|1153935_1154511_-	transcriptional regulator	NA	NA	NA	NA
WP_000068972.1\|1154547_1156245_-	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_000883400.1\|1156220_1156559_-	divalent cation tolerance protein CutA	NA	NA	NA	NA
WP_000961959.1\|1156674_1157976_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_000069437.1\|1158093_1159530_-	aspartate ammonia-lyase	NA	NA	NA	NA
WP_001267448.1\|1159866_1160343_+	membrane protein FxsA	NA	NA	NA	NA
WP_000015800.1\|1160358_1161615_-	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA
WP_001026276.1\|1161890_1162184_+	co-chaperone GroES	K4F9I2	Cronobacter_phage	9.2e-13	45.4
WP_000729117.1\|1162227_1163874_+	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	5.3e-190	68.9
WP_000558209.1\|1164011_1164365_+	DUF4156 domain-containing protein	NA	NA	NA	NA
WP_000940538.1\|1165678_1166707_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
WP_000257278.1\|1166748_1167315_+	elongation factor P	NA	NA	NA	NA
WP_000977757.1\|1167366_1167492_+	lipoprotein antitoxin entericidin A	NA	NA	NA	NA
WP_000239596.1\|1167602_1167749_+	lipoprotein toxin entericidin B	NA	NA	NA	NA
WP_000118482.1\|1167930_1168248_+	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_001238375.1\|1168244_1168778_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	8.0e-47	55.0
WP_001370451.1\|1168866_1170000_-	BlaEC family class C beta-lactamase	NA	NA	NA	NA
WP_001299198.1\|1170062_1170422_-	fumarate reductase subunit FrdD	NA	NA	NA	NA
WP_000208757.1\|1170432_1170828_-	fumarate reductase subunit FrdC	NA	NA	NA	NA
WP_000829498.1\|1170838_1171573_-	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
WP_001192973.1\|1171565_1173374_-	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA
WP_000004771.1\|1173698_1174676_+	elongation factor P--(R)-beta-lysine ligase	A0A2K9KZX5	Tupanvirus	6.8e-28	28.2
WP_001399652.1\|1174894_1176397_+	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_000342867.1\|1176448_1176763_+	hypothetical protein	NA	NA	NA	NA
WP_001276180.1\|1176759_1177074_+	YjeO family protein	NA	NA	NA	NA
WP_001236847.1\|1177102_1180426_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
WP_000934905.1\|1180447_1181416_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_000041970.1\|1181511_1182564_-	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_001295188.1\|1182658_1183204_+	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.2e-28	40.4
WP_010723271.1\|1184067_1184121_+	hypothetical protein	NA	NA	NA	NA
WP_001294219.1\|1184103_1185243_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_001307537.1\|1185241_1186789_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_000981977.1\|1186760_1187222_+\|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	NA	NA	NA	NA
WP_000990308.1\|1187240_1188578_+	N-acetylmuramoyl-L-alanine amidase AmiB	A0A067ZJB6	Vibrio_phage	8.8e-18	31.0
WP_001370456.1\|1188587_1190435_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	1.3e-59	41.0
WP_001280339.1\|1190427_1191378_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_001051883.1\|1191463_1191772_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_000460360.1\|1191847_1193128_+	GTPase HflX	NA	NA	NA	NA
WP_000312488.1\|1193213_1194473_+\|protease	FtsH protease activity modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5
1200701:1200716	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1386179 : 1422002

Enterobacteria_phage(40.0%)

tail,holin,terminase,integrase,transposase

attL 1383147:1383160|attR 1393043:1393056

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1383147:1383160	attL	NA	NA	NA	NA
WP_001218283.1\|1386179_1387397_+\|integrase	site-specific integrase	A5LH57	Enterobacteria_phage	1.7e-238	99.5
WP_000206721.1\|1389963_1390584_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	3.6e-115	92.7
WP_001242716.1\|1390583_1390946_-	hypothetical protein	K7PH61	Enterobacteria_phage	5.8e-65	98.3
WP_106901520.1\|1390936_1391473_-	5'-deoxynucleotidase	A0A0P0ZCH9	Stx2-converting_phage	2.4e-99	98.3
WP_001311077.1\|1392393_1393086_-	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	2.9e-121	96.5
1393043:1393056	attR	NA	NA	NA	NA
WP_001191671.1\|1393183_1393444_+	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	1.2e-40	98.8
WP_000515839.1\|1393436_1393988_+	hypothetical protein	A0A0P0ZE62	Stx2-converting_phage	2.2e-100	98.9
WP_001087356.1\|1393984_1395133_+	peptidase	K7PLX4	Enterobacteria_phage	7.2e-178	86.9
WP_000620698.1\|1395129_1395354_+	hypothetical protein	A5LH70	Enterobacteria_phage	2.8e-38	98.6
WP_024025783.1\|1396164_1396659_+	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	4.3e-87	98.8
WP_000066917.1\|1396658_1397312_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_000210170.1\|1397308_1397635_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_000767113.1\|1397631_1398021_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_001061444.1\|1398040_1398850_+	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	1.8e-151	100.0
WP_001223334.1\|1398865_1399381_+	hypothetical protein	V5URU3	Shigella_phage	4.6e-15	28.7
WP_001299344.1\|1399390_1400380_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.2e-194	99.4
WP_001205460.1\|1400397_1400739_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.2e-57	90.3
WP_001131907.1\|1400751_1401300_-	hypothetical protein	NA	NA	NA	NA
WP_000868396.1\|1401286_1402213_-	hypothetical protein	NA	NA	NA	NA
WP_000917724.1\|1402477_1402681_+	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000799669.1\|1402831_1403890_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	2.9e-181	86.7
WP_001370417.1\|1404332_1404764_+	tellurite resistance protein	H6WZJ6	Escherichia_phage	3.5e-69	99.3
WP_000216636.1\|1404760_1404928_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	1.1e-10	74.5
WP_032212796.1\|1405335_1407186_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	96.8
WP_085948186.1\|1407308_1408464_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_000411802.1\|1408899_1409106_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_032212794.1\|1409105_1409603_+	lysozyme	A0A0N7KZA0	Stx2-converting_phage	3.8e-91	99.4
WP_001208681.1\|1409819_1410005_+	membrane protein	A0A1U9AJA4	Stx1_converting_phage	2.9e-20	78.7
WP_001303878.1\|1410533_1410848_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000074669.1\|1410929_1411154_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.7e-20	92.5
WP_001303046.1\|1411195_1411561_+	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
WP_077760350.1\|1411852_1412254_+\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	5.6e-61	97.7
WP_085947772.1\|1412246_1413460_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
WP_001130973.1\|1413485_1414181_+	hypothetical protein	Q6H9T2	Enterobacteria_phage	8.6e-126	99.6
WP_001216289.1\|1414248_1414872_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	2.5e-68	60.4
WP_106901521.1\|1414936_1416118_+\|tail	phage tail protein	B6DZB7	Enterobacteria_phage	4.3e-69	93.6
WP_001023428.1\|1416119_1416389_+\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	2.4e-44	98.9
WP_001118085.1\|1416499_1417081_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	2.7e-48	54.8
WP_086163594.1\|1417148_1417778_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	3.9e-77	92.2
WP_001143789.1\|1417859_1418501_+	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	1.4e-106	98.6
WP_001217539.1\|1418661_1418910_-	DinI family protein	A5LH55	Enterobacteria_phage	1.1e-38	100.0
WP_000202564.1\|1419129_1420716_+	peptide chain release factor 3	D0R0F5	Streptococcus_phage	5.3e-30	24.9
WP_001295748.1\|1421108_1421714_+	molecular chaperone OsmY	NA	NA	NA	NA
WP_000490275.1\|1421840_1422002_+	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	64.2

DBSCAN-SWA_4

1947729 : 2045297

Enterobacteria_phage(45.0%)

protease,tail,portal,terminase,head,capsid,tRNA,integrase,transposase

attL 2004423:2004469|attR 2036771:2036817

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000186631.1\|1947729_1948209_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_000365135.1\|1948412_1949207_-	hypothetical protein	NA	NA	NA	NA
WP_001370330.1\|1949344_1949686_+	HigA family addiction module antidote protein	A0A222YWD7	Escherichia_phage	9.3e-41	74.5
WP_000083976.1\|1949799_1952304_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	1.4e-114	38.1
WP_000883019.1\|1952565_1953498_+	glutaminase A	NA	NA	NA	NA
WP_000982172.1\|1953500_1954793_+	amino acid permease	NA	NA	NA	NA
WP_001026747.1\|1954917_1955325_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_000970323.1\|1955325_1955784_-	NfeD family protein	NA	NA	NA	NA
WP_000904502.1\|1955780_1956698_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_032210040.1\|1956843_1957521_+	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	6.8e-27	33.8
WP_001323739.1\|1957507_1958287_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_001295322.1\|1958349_1959204_-	chaperedoxin	NA	NA	NA	NA
WP_000148959.1\|1959264_1960074_-	NADP(+)-dependent aldehyde reductase	NA	NA	NA	NA
WP_001295836.1\|1960063_1960687_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_001110573.1\|1960657_1961344_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-33	35.6
WP_000561833.1\|1961340_1963755_+	ABC transporter permease	NA	NA	NA	NA
WP_106901527.1\|1964183_1968374_+	RHS repeat protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.3e-22	44.6
WP_106901528.1\|1968354_1968846_+	hypothetical protein	NA	NA	NA	NA
WP_001158006.1\|1969847_1970942_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_000460145.1\|1971010_1971937_-	HTH-type transcriptional activator AllS	NA	NA	NA	NA
WP_000776388.1\|1972166_1972649_+	ureidoglycolate lyase	NA	NA	NA	NA
WP_000141275.1\|1972726_1973542_+	HTH-type transcriptional repressor AllR	NA	NA	NA	NA
WP_001370296.1\|1973631_1975413_+	glyoxylate carboligase	E4WLQ6	Ostreococcus_tauri_virus	6.0e-38	26.8
WP_000943556.1\|1975425_1976202_+	hydroxypyruvate isomerase	NA	NA	NA	NA
WP_032209890.1\|1976301_1977180_+	2-hydroxy-3-oxopropionate reductase	NA	NA	NA	NA
WP_000401125.1\|1977348_1978803_+	putative allantoin permease	NA	NA	NA	NA
WP_000006887.1\|1978862_1980224_+	allantoinase AllB	NA	NA	NA	NA
WP_001370313.1\|1980280_1981582_+	uracil/xanthine transporter	NA	NA	NA	NA
WP_001370319.1\|1981603_1982749_+	glycerate 3-kinase	W6LM47	Streptococcus_phage	4.1e-48	41.9
WP_000540996.1\|1982976_1983762_-	(S)-ureidoglycine aminohydrolase	NA	NA	NA	NA
WP_001370308.1\|1983772_1985008_-	allantoate deiminase	NA	NA	NA	NA
WP_000703894.1\|1985029_1986079_-	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_000580865.1\|1986395_1988063_+	acyl-CoA synthetase FdrA	NA	NA	NA	NA
WP_000495365.1\|1988072_1989332_+	DUF1116 domain-containing protein	NA	NA	NA	NA
WP_001325209.1\|1989342_1990158_+	DUF2877 domain-containing protein	NA	NA	NA	NA
WP_000855398.1\|1990154_1991048_+	carbamate kinase	NA	NA	NA	NA
WP_000815538.1\|1991186_1992254_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001295318.1\|1992250_1992760_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_000212252.1\|1992877_1993600_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_000256002.1\|1993602_1994097_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_000912345.1\|1994270_1995656_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8
WP_001143552.1\|1995691_1996213_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190288.1\|1996320_1996533_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729160.1\|1996534_1997401_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_000776558.1\|1997881_1998424_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
WP_001370299.1\|1999365_2001975_+	fimbrial biogenesis usher protein	NA	NA	NA	NA
WP_000691047.1\|2001987_2002995_+	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_001396973.1\|2003005_2003521_+	fimbria assembly protein	NA	NA	NA	NA
WP_000805418.1\|2003523_2004156_-	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA
2004423:2004469	attL	NA	NA	NA	NA
WP_001370298.1\|2004482_2005646_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	9.8e-199	86.3
WP_000446905.1\|2005501_2005873_-	helix-turn-helix domain-containing protein	M1FJ59	Enterobacteria_phage	2.1e-46	81.0
WP_000488407.1\|2005844_2006123_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
WP_000763385.1\|2006170_2006389_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	7.5e-36	100.0
WP_001443983.1\|2006487_2006769_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	7.2e-47	98.9
WP_087661054.1\|2006825_2008038_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_029594360.1\|2008096_2008621_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	2.2e-89	97.7
WP_001027188.1\|2008595_2010521_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	98.3
WP_000198151.1\|2010517_2010730_+\|head,tail	head-tail joining protein	A0A2R9YJL2	Escherichia_phage	1.6e-27	95.7
WP_001370283.1\|2010726_2012328_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.2e-308	98.7
WP_050926764.1\|2012308_2013628_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.1e-225	95.4
WP_001358596.1\|2013637_2013970_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.4e-54	99.1
WP_024233962.1\|2014024_2015050_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.3e-190	98.2
WP_032284437.1\|2015091_2015487_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	4.1e-56	92.4
WP_000752996.1\|2015498_2015852_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	1.5e-62	99.1
WP_001121835.1\|2015863_2016442_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.7e-79	99.0
WP_024200945.1\|2016438_2016834_+	hypothetical protein	A0A0K2FIF4	Enterobacteria_phage	5.0e-70	99.2
WP_001370356.1\|2016841_2017582_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	5.0e-132	99.2
WP_000479147.1\|2017597_2018020_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.9e-72	99.3
WP_000459457.1\|2018001_2018436_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000840238.1\|2018428_2020990_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	92.7
WP_000847371.1\|2020986_2021316_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	2.1e-53	93.6
WP_001152565.1\|2021315_2022014_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.6e-132	98.7
WP_000194780.1\|2022019_2022763_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
WP_000090891.1\|2022699_2023332_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-96	99.5
WP_000515724.1\|2023392_2026734_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	96.8
WP_085947772.1\|2026754_2027967_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
WP_001230348.1\|2028136_2028736_+	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	8.8e-111	99.0
WP_077633707.1\|2030899_2031871_+\|tail	tail fiber protein	K7PHC9	Enterobacteria_phage	2.1e-37	89.3
WP_000885574.1\|2031870_2032455_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-101	93.8
WP_000239881.1\|2032509_2033178_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937500.1\|2033234_2033540_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.8e-12	76.5
WP_001226375.1\|2033723_2035208_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001201825.1\|2035394_2036348_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
WP_001177464.1\|2036860_2037622_-	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA
2036771:2036817	attR	NA	NA	NA	NA
WP_001224569.1\|2037804_2038695_-	DUF4434 family protein	NA	NA	NA	NA
WP_000662369.1\|2038695_2041668_-	bacteriophage adsorption protein NfrA	NA	NA	NA	NA
WP_000383947.1\|2041654_2043892_-	phage adsorption protein NrfB	NA	NA	NA	NA
WP_000420919.1\|2044160_2045297_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2480587 : 2604090

157

Enterobacteria_phage(34.55%)

protease,tail,holin,terminase,portal,head,capsid,integrase,transposase

attL 2503702:2503721|attR 2560298:2560317

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000156526.1\|2480587_2482348_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877158.1\|2482533_2482986_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000750419.1\|2483060_2484113_-	porin OmpA	NA	NA	NA	NA
WP_000288710.1\|2484469_2484979_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_000841914.1\|2485197_2485827_+	CRP-S regulon transcriptional coactivator Sxy	NA	NA	NA	NA
WP_000875061.1\|2485789_2487952_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261235.1\|2487961_2488408_-	YccF domain-containing protein	NA	NA	NA	NA
WP_001295354.1\|2488530_2490585_+	DNA helicase IV	A7KV33	Bacillus_phage	5.9e-21	27.9
WP_000424181.1\|2490616_2491075_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847791.1\|2491170_2491833_-	DUF2057 family protein	NA	NA	NA	NA
WP_000665217.1\|2492005_2492419_+	CoA-binding protein	NA	NA	NA	NA
WP_001295356.1\|2492463_2492781_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000116288.1\|2492838_2494029_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000048233.1\|2494123_2494402_+	acylphosphatase	NA	NA	NA	NA
WP_000904442.1\|2494398_2494728_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000375136.1\|2494818_2495478_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	4.0e-48	55.3
WP_001370339.1\|2495885_2496905_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.9e-85	49.4
WP_000273151.1\|2496882_2497125_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_106901532.1\|2497192_2498539_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.5e-57	57.7
WP_001066419.1\|2498634_2500191_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.3e-161	56.2
WP_000631725.1\|2500210_2500558_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_106901533.1\|2500554_2501229_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_159031907.1\|2501307_2502345_-	exonuclease	NA	NA	NA	NA
WP_001090200.1\|2502437_2502629_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449192.1\|2502625_2502814_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_000394557.1\|2503345_2503720_-	hypothetical protein	NA	NA	NA	NA
2503702:2503721	attL	NA	NA	NA	NA
WP_000379580.1\|2503731_2503884_-	DUF1391 family protein	M4QQ57	Salicola_phage	3.9e-07	53.2
WP_000103686.1\|2504156_2504873_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	3.8e-52	42.0
WP_000471549.1\|2504922_2505138_+	transcriptional regulator	NA	NA	NA	NA
WP_000693949.1\|2505134_2505560_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001262384.1\|2505631_2506702_+	hypothetical protein	A0A088CD36	Shigella_phage	8.2e-59	62.2
WP_001151153.1\|2506742_2507165_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.1e-64	92.1
WP_001266134.1\|2507161_2507458_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	3.4e-47	94.7
WP_001209480.1\|2507454_2507916_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	3.4e-38	92.9
WP_000403777.1\|2507893_2508250_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.0e-58	98.3
WP_000935420.1\|2508300_2508513_+	hypothetical protein	A0A2R2Z310	Escherichia_phage	5.8e-33	94.3
WP_042350895.1\|2508598_2508763_+	DUF4014 family protein	A0A1I9LJM2	Stx_converting_phage	2.0e-17	90.7
WP_000224233.1\|2508764_2509028_+	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_000208016.1\|2509038_2509908_+	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	8.5e-123	79.2
WP_001278454.1\|2510023_2510128_+	hypothetical protein	NA	NA	NA	NA
WP_000902696.1\|2510316_2510529_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.2e-25	91.4
WP_001341388.1\|2510696_2510975_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
WP_001265133.1\|2510976_2512026_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.9
WP_000904103.1\|2512038_2512398_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.8e-34	60.0
WP_000640048.1\|2512406_2512937_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	9.3e-72	72.6
WP_000917767.1\|2513178_2513376_+	hypothetical protein	Q9MC00	Enterobacteria_phage	2.1e-29	100.0
WP_000024329.1\|2513527_2514604_+	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	3.8e-181	87.1
WP_001443281.1\|2515199_2515526_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.1e-36	62.9
WP_000142777.1\|2517908_2518088_+	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	1.4e-24	96.6
WP_001290233.1\|2518128_2518374_+	DUF826 domain-containing protein	S5MW40	Escherichia_phage	2.2e-15	90.1
WP_000284506.1\|2518450_2518666_+\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_000087730.1\|2518670_2519204_+	lysozyme	A0A1I9LJR4	Stx_converting_phage	3.9e-102	98.9
WP_001056806.1\|2519474_2520044_+	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
WP_000539792.1\|2520043_2520190_+	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
WP_012816791.1\|2520417_2520603_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_000373407.1\|2521079_2521556_+	DUF1441 family protein	Q8VNN8	Enterobacteria_phage	3.3e-84	100.0
WP_001077621.1\|2521552_2522560_+\|terminase	phage terminase large subunit family protein	Q9EYD1	Enterobacteria_phage	1.8e-201	100.0
WP_000114064.1\|2522721_2523960_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	6.6e-60	35.1
WP_000229066.1\|2523952_2524177_+	hypothetical protein	NA	NA	NA	NA
WP_001038673.1\|2524236_2524815_+	hypothetical protein	A0A1W6JPH8	Morganella_phage	4.9e-58	65.4
WP_000201455.1\|2524935_2525115_-	hypothetical protein	NA	NA	NA	NA
WP_024176648.1\|2525309_2525507_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_000335965.1\|2525499_2525724_+	hypothetical protein	NA	NA	NA	NA
WP_000551747.1\|2525716_2526085_+	hypothetical protein	NA	NA	NA	NA
WP_001204082.1\|2526077_2526311_+	hypothetical protein	NA	NA	NA	NA
WP_000728901.1\|2526507_2526750_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000761774.1\|2526746_2528561_+	DNA primase	Q7M2A8	Enterobacteria_phage	5.7e-129	49.9
WP_001399692.1\|2528848_2529094_+	hypothetical protein	NA	NA	NA	NA
WP_000126660.1\|2529090_2529513_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_001302595.1\|2529940_2530087_-	hypothetical protein	NA	NA	NA	NA
WP_106901535.1\|2530170_2532060_+\|protease	Clp protease ClpP	Q8VNN5	Enterobacteria_phage	7.2e-183	51.5
WP_000133409.1\|2532317_2532599_+	hypothetical protein	NA	NA	NA	NA
WP_000102415.1\|2534091_2534304_+	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
WP_000974554.1\|2534303_2535806_+\|portal	phage portal protein	S5MW34	Escherichia_phage	3.1e-290	99.8
WP_001114424.1\|2535750_2537775_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.8
WP_001097065.1\|2537862_2538189_+	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
WP_001281350.1\|2538181_2538463_+	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	3.9e-45	97.8
WP_000974960.1\|2538465_2539089_+	hypothetical protein	Q9EYD6	Enterobacteria_phage	2.5e-100	99.5
WP_000682716.1\|2539101_2539500_+\|tail	tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
WP_000235090.1\|2539507_2540260_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
WP_000479062.1\|2540273_2540696_+\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	2.2e-71	97.9
WP_000532073.1\|2540722_2541031_+\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	1.3e-54	100.0
WP_106901536.1\|2541074_2543720_+\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	94.6
WP_000847298.1\|2543716_2544046_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_001302134.1\|2544045_2544744_+\|tail	phage minor tail protein L	Q687F1	Enterobacteria_phage	5.2e-131	98.3
WP_001444516.1\|2544754_2545498_+\|tail	phage tail protein	Q9EYE4	Enterobacteria_phage	1.7e-148	98.0
WP_159031909.1\|2545443_2546073_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	6.0e-102	98.1
WP_106901538.1\|2546313_2549790_+	host specificity protein J	Q687E8	Enterobacteria_phage	0.0e+00	94.4
WP_001230497.1\|2549856_2550456_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZE39	Stx2-converting_phage	9.7e-110	98.5
WP_106901539.1\|2550520_2551834_+\|tail	phage tail protein	A0A0P0ZCC1	Stx2-converting_phage	6.9e-76	96.6
WP_001023407.1\|2551835_2552105_+\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.4e-44	98.9
WP_000938124.1\|2552559_2553921_-	type III secretion system effector EspK	Q9MBM1	Phage_Gifsy-1	1.5e-49	40.2
WP_095585410.1\|2554297_2554450_+\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	4.3e-14	84.4
WP_001299351.1\|2554732_2555752_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	1.3e-85	49.7
WP_000273151.1\|2555729_2555972_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000034468.1\|2556039_2558511_-	exonuclease	A0A192Y6E0	Salmonella_phage	8.5e-59	58.2
WP_001098307.1\|2558604_2558796_-	DUF1482 family protein	NA	NA	NA	NA
WP_000413705.1\|2558792_2558981_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001133046.1\|2559554_2559740_+	hypothetical protein	NA	NA	NA	NA
WP_000394511.1\|2559926_2560316_-	hypothetical protein	NA	NA	NA	NA
WP_000379575.1\|2560457_2560613_-	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
2560298:2560317	attR	NA	NA	NA	NA
WP_001303876.1\|2560889_2561177_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000536233.1\|2561176_2561368_-	hypothetical protein	NA	NA	NA	NA
WP_000986592.1\|2561395_2561797_-	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	7.4e-13	54.5
WP_000887453.1\|2561905_2562178_+	hypothetical protein	A0A0U2S629	Escherichia_phage	1.1e-12	45.8
WP_000693855.1\|2562161_2562587_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000273724.1\|2562793_2563249_-	hypothetical protein	NA	NA	NA	NA
WP_000788752.1\|2564449_2565190_+	ATP-binding protein	A0A088CBP4	Shigella_phage	2.0e-117	85.0
WP_000450862.1\|2565215_2565986_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	3.7e-85	67.6
WP_001151233.1\|2566001_2566415_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	9.8e-61	89.1
WP_000160651.1\|2566766_2567540_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000955173.1\|2567905_2568043_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	5.4e-08	96.6
WP_001013642.1\|2568087_2568300_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.5e-25	95.4
WP_072145984.1\|2568467_2568746_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
WP_001217436.1\|2569673_2570045_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.3e-35	63.7
WP_000090265.1\|2570034_2570406_+	antitermination protein	Q777W5	Enterobacteria_phage	1.0e-53	84.0
WP_000265267.1\|2570557_2571376_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000917739.1\|2571662_2571860_+	hypothetical protein	S5MQK8	Escherichia_phage	5.7e-27	95.4
WP_000261909.1\|2571997_2572711_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000466957.1\|2573158_2573590_+	tellurite resistance TerB family protein	H6WZJ6	Escherichia_phage	3.3e-67	97.2
WP_153244796.1\|2573939_2574083_-	hypothetical protein	H6WZJ8	Escherichia_phage	3.7e-15	97.4
WP_106901540.1\|2574068_2576006_+	SASA family carbohydrate esterase	Q6H9W1	Enterobacteria_phage	0.0e+00	96.6
WP_000143462.1\|2576141_2576321_+	DUF1378 family protein	A0A0P0ZCJ7	Stx2-converting_phage	3.7e-25	100.0
WP_001290231.1\|2576361_2576634_+	DUF826 domain-containing protein	A0A0P0ZBB8	Stx2-converting_phage	2.2e-21	100.0
WP_000284518.1\|2576710_2576926_+\|holin	holin	Q6H9V8	Enterobacteria_phage	2.0e-33	100.0
WP_000731198.1\|2576930_2577275_+	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.4e-57	98.2
WP_000992152.1\|2577325_2577859_+	lysozyme	B6DZ92	Enterobacteria_phage	6.2e-100	96.0
WP_012816791.1\|2578377_2578563_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_001302717.1\|2579047_2579362_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001300236.1\|2579443_2579668_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
WP_000235436.1\|2580070_2580580_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001370721.1\|2580551_2582480_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.8e-261	66.2
WP_000259002.1\|2582463_2582670_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_000831794.1\|2582666_2584259_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.1e-183	60.7
WP_001253987.1\|2584248_2585754_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.6e-100	54.2
WP_000256807.1\|2585790_2586138_+\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	4.4e-22	57.0
WP_000522623.1\|2586195_2587224_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.0e-114	61.9
WP_000201512.1\|2587275_2587659_+	DNA-packaging protein FI	NA	NA	NA	NA
WP_001204559.1\|2587651_2588005_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	3.3e-41	67.5
WP_000975030.1\|2588019_2588553_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.0e-57	65.1
WP_000683065.1\|2588549_2588945_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	6.7e-59	83.2
WP_001143019.1\|2588952_2589705_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.4e-126	93.2
WP_085948186.1\|2589757_2590914_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_000479115.1\|2590985_2591417_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.8e-42	67.3
WP_000533420.1\|2591443_2591857_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	7.8e-42	81.2
WP_000082371.1\|2591837_2594417_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.6
WP_000847298.1\|2594413_2594743_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_032212654.1\|2594742_2595441_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	5.8e-130	97.8
WP_106901541.1\|2595446_2596190_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	6.4e-143	96.3
WP_000090917.1\|2596126_2596759_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-97	100.0
WP_101329699.1\|2596819_2600299_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.2
WP_001233099.1\|2600366_2600966_+	Ail/Lom family outer membrane beta-barrel protein	A5LH44	Enterobacteria_phage	1.1e-108	97.0
WP_101329698.1\|2601030_2602344_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	2.8e-77	98.2
WP_001023455.1\|2602345_2602615_+\|tail	phage tail protein	Q687E5	Enterobacteria_phage	2.4e-44	98.9
WP_000767049.1\|2602836_2603379_+	hypothetical protein	Q9LA55	Enterobacteria_phage	9.3e-51	68.0
WP_106420821.1\|2603323_2603518_+	hypothetical protein	A0A2R2Z347	Escherichia_phage	4.1e-09	84.6
WP_001131653.1\|2603508_2604090_+	T3SS effector NleG family protein	H6WZN1	Escherichia_phage	5.1e-63	64.2

DBSCAN-SWA_6

2723171 : 2810585

118

Stx2-converting_phage(28.75%)

protease,transposase,tail,holin,portal,integrase,head

attL 2778730:2778747|attR 2810358:2810375

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000074974.1\|2723171_2724290_-\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	2.6e-84	44.4
WP_000003742.1\|2724258_2724528_-	excisionase	NA	NA	NA	NA
WP_000048560.1\|2724589_2727061_-	exonuclease	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
WP_000560212.1\|2727184_2727406_-	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	4.3e-31	82.2
WP_001331716.1\|2727811_2727976_+	hypothetical protein	NA	NA	NA	NA
WP_001240334.1\|2728118_2728418_-	hypothetical protein	NA	NA	NA	NA
WP_001303511.1\|2728770_2729049_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_001302048.1\|2729050_2729242_-	hypothetical protein	NA	NA	NA	NA
WP_001169687.1\|2729262_2729634_-	hypothetical protein	NA	NA	NA	NA
WP_000172738.1\|2729731_2730034_+	transcriptional regulator	K7PHA1	Enterobacteria_phage	8.6e-06	34.8
WP_000693944.1\|2730030_2730456_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000095671.1\|2730478_2731441_+	DNA-binding protein	U5P0A0	Shigella_phage	2.1e-69	51.2
WP_001151187.1\|2731481_2731904_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	3.9e-65	92.1
WP_000935423.1\|2732009_2732222_+	hypothetical protein	A0A2R2Z310	Escherichia_phage	5.6e-36	97.1
WP_000209148.1\|2732254_2732473_+	DUF4014 family protein	A0A1I9LJM2	Stx_converting_phage	5.2e-29	91.7
WP_001370098.1\|2732474_2732633_+	hypothetical protein	A0A220NQU8	Salmonella_phage	2.2e-13	75.6
WP_001066422.1\|2732636_2734193_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.3e-161	56.0
WP_000631725.1\|2734212_2734560_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001341423.1\|2734556_2735231_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_136865621.1\|2735236_2735455_+	hypothetical protein	S4TNB5	Salmonella_phage	7.6e-12	70.8
WP_000208016.1\|2735465_2736335_+	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	8.5e-123	79.2
WP_001278454.1\|2736450_2736555_+	hypothetical protein	NA	NA	NA	NA
WP_024174193.1\|2736743_2736956_+	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	2.5e-28	97.1
WP_000756560.1\|2737073_2737421_+	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	9.2e-44	81.7
WP_000046991.1\|2737541_2737814_+	hypothetical protein	S4TNP0	Salmonella_phage	1.9e-12	53.1
WP_001265272.1\|2737815_2738865_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.1e-108	53.7
WP_001121083.1\|2738877_2739252_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	6.4e-35	61.1
WP_000762899.1\|2739248_2740070_+	hypothetical protein	K7P7B9	Enterobacteria_phage	8.2e-83	61.9
WP_000917750.1\|2740295_2740493_+	hypothetical protein	S5MQK8	Escherichia_phage	1.0e-28	98.5
WP_000935558.1\|2740643_2741702_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	3.8e-189	90.1
WP_001344632.1\|2742589_2742721_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	5.2e-08	85.7
WP_032212668.1\|2743163_2745014_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	97.1
WP_000411804.1\|2745460_2745667_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	5.3e-31	98.5
WP_087661054.1\|2745711_2746925_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_000138558.1\|2747235_2747508_-	hypothetical protein	NA	NA	NA	NA
WP_001003112.1\|2747667_2748201_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	2.1e-100	95.5
WP_001443546.1\|2748278_2748470_+	hypothetical protein	A0A0M4S639	Salmonella_phage	7.8e-05	63.9
WP_001208682.1\|2748847_2749054_+	hypothetical protein	H6WRZ6	Salmonella_phage	7.1e-12	64.7
WP_000735655.1\|2749118_2749343_+	hypothetical protein	NA	NA	NA	NA
WP_000347013.1\|2749699_2749840_+	hypothetical protein	NA	NA	NA	NA
WP_032208049.1\|2749969_2750083_-	DUF3950 domain-containing protein	H6WZK6	Escherichia_phage	2.9e-07	85.7
WP_000088311.1\|2750150_2750453_+\|transposase	transposase	NA	NA	NA	NA
WP_094185360.1\|2750550_2751706_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.8e-68	45.1
WP_077760344.1\|2751699_2752443_+\|portal	phage portal protein	A0A0P0ZCZ4	Stx2-converting_phage	7.2e-78	99.3
WP_000125984.1\|2752439_2752766_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
WP_001007905.1\|2752776_2753127_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573374.1\|2753123_2753570_+	HK97 gp10 family phage protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
WP_000133388.1\|2753566_2753911_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_001275482.1\|2753976_2754693_+\|tail	tail protein	B6DZA6	Enterobacteria_phage	6.2e-127	99.2
WP_000710949.1\|2754707_2755082_+\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
WP_001453698.1\|2755177_2755387_+	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_000212947.1\|2755438_2758681_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	95.6
WP_000807954.1\|2758673_2759015_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
WP_032212666.1\|2759014_2759713_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	3.1e-131	97.8
WP_124983447.1\|2760413_2761043_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.5e-97	94.2
WP_106901542.1\|2761283_2764760_+	host specificity protein J	Q6H9T2	Enterobacteria_phage	0.0e+00	98.2
WP_024174257.1\|2764828_2765404_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	1.2e-59	55.6
WP_106901543.1\|2765468_2766782_+\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	2.8e-77	98.9
WP_032212659.1\|2766783_2767053_+\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	7.1e-44	97.8
WP_012817749.1\|2767178_2767931_-	type III effector	NA	NA	NA	NA
WP_001370123.1\|2769047_2770166_+	hydrogenase 1 small subunit	NA	NA	NA	NA
WP_000107384.1\|2770162_2771956_+	Ni/Fe-hydrogenase large subunit	NA	NA	NA	NA
WP_001186424.1\|2771974_2772682_+	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
WP_000003671.1\|2772678_2773266_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
WP_000063978.1\|2773262_2773661_+	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA
WP_000004899.1\|2773657_2774515_+	hydrogenase expression/formation protein	NA	NA	NA	NA
WP_000263584.1\|2774648_2776193_+	cytochrome bd-II oxidase subunit 1	NA	NA	NA	NA
WP_000460789.1\|2776204_2777341_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_000270305.1\|2777353_2777446_+	cytochrome bd-II oxidase subunit CbdX	NA	NA	NA	NA
WP_001297112.1\|2777525_2778824_+	AppA family phytase/histidine-type acid phosphatase	NA	NA	NA	NA
2778730:2778747	attL	NA	NA	NA	NA
WP_000208650.1\|2778938_2781119_-	tyrosine-protein kinase	NA	NA	NA	NA
WP_000057871.1\|2781138_2781585_-	protein-tyrosine-phosphatase Etp	NA	NA	NA	NA
WP_001295357.1\|2781572_2782712_-	polysaccharide export protein	NA	NA	NA	NA
WP_000742335.1\|2782757_2784854_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_001038062.1\|2784853_2785600_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_001247610.1\|2785596_2786241_-	lipoprotein GfcB	NA	NA	NA	NA
WP_001295358.1\|2786347_2786653_-	threonine-rich inner membrane protein GfcA	NA	NA	NA	NA
WP_000087763.1\|2787094_2787307_-	cold shock-like protein CspH	NA	NA	NA	NA
WP_000066490.1\|2787592_2787805_+	cold shock protein CspG	A0A1W6JNX5	Morganella_phage	7.8e-22	71.4
WP_071524879.1\|2787815_2788004_+	cold-shock protein	NA	NA	NA	NA
WP_001309400.1\|2787978_2788209_+	protein YmcE	NA	NA	NA	NA
WP_001019197.1\|2788198_2788372_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_000818477.1\|2788420_2789494_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_001399304.1\|2789565_2792310_-	TMAO reductase system sensor histidine kinase/response regulator TorS	A0A1V0SGX0	Hokovirus	4.6e-37	32.2
WP_000533662.1\|2792404_2793478_-\|integrase	tyrosine-type recombinase/integrase	Q9G075	Enterobacteria_phage	1.3e-200	99.7
WP_001303849.1\|2793455_2793674_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_000545745.1\|2793713_2793881_-	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
WP_000022062.1\|2793969_2794251_-	hypothetical protein	NA	NA	NA	NA
WP_000208006.1\|2794365_2795163_-	DUF550 domain-containing protein	A0A075B8H2	Enterobacteria_phage	5.7e-49	41.1
WP_000582238.1\|2795173_2795929_-	hypothetical protein	A0A1R3Y5Q7	Salmonella_virus	4.2e-142	92.8
WP_001289864.1\|2795930_2796338_-	ead/Ea22-like family protein	A0A125RPT9	Escherichia_phage	2.8e-68	97.8
WP_000763386.1\|2796334_2796556_-	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	6.4e-35	98.6
WP_001443983.1\|2796654_2796936_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	7.2e-47	98.9
WP_000548546.1\|2796946_2797138_-	DUF1382 family protein	A0A0P0ZC49	Stx2-converting_phage	4.3e-27	100.0
WP_032204932.1\|2797110_2797293_-	DUF1317 domain-containing protein	A0A0P0ZAS9	Stx2-converting_phage	2.2e-28	98.3
WP_000186740.1\|2797292_2797970_-	YqaJ viral recombinase family protein	A0A1I9LJM9	Stx_converting_phage	4.6e-132	100.0
WP_000100845.1\|2797966_2798752_-	phage recombination protein Bet	A0A0N7KZJ3	Stx2-converting_phage	1.1e-148	100.0
WP_000995439.1\|2798757_2799054_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_000372922.1\|2799108_2799273_-	host cell division inhibitory peptide Kil	A0A0P0ZC96	Stx2-converting_phage	9.3e-23	96.3
WP_001198859.1\|2799241_2799406_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A0N6WES3	Escherichia_phage	9.0e-26	98.1
WP_001132915.1\|2799478_2799847_-	DUF2528 family protein	A0A0N7C1W2	Escherichia_phage	1.1e-63	96.7
WP_000213975.1\|2800032_2800233_-	Restriction inhibitor protein ral	A0A0K2FJE6	Enterobacteria_phage	1.4e-33	100.0
WP_072097037.1\|2800981_2801437_-	antitermination protein	J3JZZ6	Escherichia_phage	6.8e-63	96.1
WP_096910866.1\|2801785_2802604_-	NYN domain-containing protein	A4JWQ6	Burkholderia_virus	3.3e-36	46.2
WP_001274756.1\|2802770_2803484_-	LexA family transcriptional regulator	A4KWV9	Enterobacteria_phage	3.5e-130	99.2
WP_000437875.1\|2803584_2803785_+	hypothetical protein	A4KWT7	Enterobacteria_phage	4.3e-30	100.0
WP_000251069.1\|2803903_2804197_+	hypothetical protein	A2SY75	Escherichia_phage	3.7e-46	100.0
WP_000185425.1\|2804229_2805129_+	replication protein	K7P7F0	Enterobacteria_phage	6.0e-172	99.0
WP_000788869.1\|2805125_2805827_+	Replication protein P	A0A0P0ZD31	Stx2-converting_phage	1.3e-129	99.6
WP_000145926.1\|2805823_2806114_+	protein ren	O48423	Enterobacteria_phage	9.6e-47	100.0
WP_000736903.1\|2806187_2806628_+	recombination protein NinB	A0A220NRM1	Escherichia_phage	7.0e-81	100.0
WP_001254222.1\|2806624_2806807_+	NinE family protein	Q8H9Z6	Enterobacteria_phage	1.9e-29	100.0
WP_000566869.1\|2806803_2806974_+	protein ninF	Q8H9Z5	Enterobacteria_phage	3.5e-25	96.4
WP_001108066.1\|2806966_2807587_+	recombination protein NinG	Q716C3	Shigella_phage	2.0e-94	96.1
WP_001028836.1\|2807583_2808249_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	3.2e-130	99.1
WP_000750155.1\|2808460_2809420_-	lipid A deacylase LpxR family protein	NA	NA	NA	NA
WP_032160865.1\|2809758_2809881_+	YlcG family protein	NA	NA	NA	NA
WP_001097237.1\|2809895_2810585_+	Q antiterminator encoded by prophage CP-933P	I6PDF8	Cronobacter_phage	1.5e-58	48.1
2810358:2810375	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2814251 : 2851000

Escherichia_phage(35.14%)

transposase,tail,holin,terminase,portal,capsid,lysis,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001341423.1\|2814251_2814926_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_000631725.1\|2814922_2815270_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001066419.1\|2815289_2816846_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.3e-161	56.2
WP_000411802.1\|2817068_2817275_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_001135302.1\|2817274_2817772_+	lysozyme	A0A1B5FP97	Escherichia_phage	1.4e-90	97.6
WP_000092313.1\|2817768_2818206_+\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	4.2e-70	96.6
WP_001307652.1\|2819159_2819354_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
WP_001429103.1\|2819781_2820288_+	DNA-packaging protein	O64316	Escherichia_phage	1.5e-34	47.9
WP_001299181.1\|2820259_2822188_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.8e-261	66.0
WP_000259002.1\|2822171_2822378_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_000831794.1\|2822374_2823967_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.1e-183	60.7
WP_001253987.1\|2823956_2825462_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.6e-100	54.2
WP_000256807.1\|2825498_2825846_+\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	4.4e-22	57.0
WP_106901544.1\|2825961_2826933_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.6e-106	61.8
WP_000201512.1\|2826984_2827368_+	DNA-packaging protein FI	NA	NA	NA	NA
WP_001204559.1\|2827360_2827714_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	3.3e-41	67.5
WP_000975030.1\|2827728_2828262_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.0e-57	65.1
WP_000683065.1\|2828258_2828654_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	6.7e-59	83.2
WP_001143019.1\|2828661_2829414_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.4e-126	93.2
WP_085948186.1\|2829466_2830623_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_000479115.1\|2830694_2831126_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.8e-42	67.3
WP_000533420.1\|2831152_2831566_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	7.8e-42	81.2
WP_000082371.1\|2831546_2834126_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.6
WP_000847298.1\|2834122_2834452_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_032212654.1\|2834451_2835150_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	5.8e-130	97.8
WP_106901545.1\|2835155_2835899_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.9e-147	97.6
WP_122994837.1\|2835844_2836477_+\|tail	tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	3.1e-98	93.3
WP_096910863.1\|2837034_2838248_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.3e-166	97.3
WP_106901569.1\|2838466_2841502_+	host specificity protein J	Q6H9T2	Enterobacteria_phage	0.0e+00	97.6
WP_024174257.1\|2841570_2842146_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	1.2e-59	55.6
WP_106901543.1\|2842210_2843524_+\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	2.8e-77	98.9
WP_001370649.1\|2843525_2843795_+\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	1.4e-44	98.9
WP_032210229.1\|2843908_2844484_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	4.6e-56	60.0
WP_001118085.1\|2844774_2845356_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	2.7e-48	54.8
WP_012816780.1\|2845423_2846059_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	3.7e-75	92.0
WP_001299273.1\|2846186_2847245_-	T3SS effector EspW	NA	NA	NA	NA
WP_001144080.1\|2847319_2847970_-	T3SS effector NleG family protein	B6DZZ5	Stx2-converting_phage	2.8e-25	37.2
WP_001132165.1\|2848152_2848743_+	bfpT-regulated chaperone	NA	NA	NA	NA
WP_000799399.1\|2849016_2849880_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000531590.1\|2849863_2851000_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	2.1e-28	39.2

DBSCAN-SWA_8

2966842 : 2978301

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000394552.1\|2966842_2967250_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	7.0e-11	37.8
WP_085948186.1\|2967326_2968483_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_001171901.1\|2968539_2968758_-	hypothetical protein	NA	NA	NA	NA
WP_001240336.1\|2968830_2969130_-	hypothetical protein	NA	NA	NA	NA
WP_000787428.1\|2969394_2969802_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000912298.1\|2969878_2970106_+	transcriptional regulator	NA	NA	NA	NA
WP_000705623.1\|2970089_2970641_+	hypothetical protein	NA	NA	NA	NA
WP_000020556.1\|2970612_2971653_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	7.9e-91	87.2
WP_157830737.1\|2971564_2972107_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.5e-85	98.7
WP_000450692.1\|2972140_2972875_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	7.7e-109	84.7
WP_122368318.1\|2972871_2973036_+	hypothetical protein	NA	NA	NA	NA
WP_001449026.1\|2973734_2974493_+	AcfC family adhesin Paa	NA	NA	NA	NA
WP_000961821.1\|2974771_2974984_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
WP_001217394.1\|2975204_2975462_+	hypothetical protein	NA	NA	NA	NA
WP_010917803.1\|2975531_2975810_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	48.4
WP_001370670.1\|2975811_2976804_+	DUF968 domain-containing protein	S5FV02	Shigella_phage	7.3e-78	47.3
WP_085947772.1\|2977088_2978301_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1

DBSCAN-SWA_9

3084542 : 3132159

Escherichia_phage(51.61%)

tRNA,integrase,tail,transposase

attL 3084176:3084191|attR 3131811:3131826

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3084176:3084191	attL	NA	NA	NA	NA
WP_000628065.1\|3084542_3085775_-	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
WP_000387388.1\|3086029_3087013_+	zinc transporter ZntB	NA	NA	NA	NA
WP_001296046.1\|3087287_3087461_+	hypothetical protein	NA	NA	NA	NA
WP_000123758.1\|3087490_3088864_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_001157421.1\|3088992_3089928_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	2.2e-145	98.4
WP_000040852.1\|3089979_3091215_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	5.5e-240	98.8
WP_000079604.1\|3091216_3091432_-	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_000276809.1\|3091510_3091720_-	double-strand break reduction protein RcbA	A0A0U2QL97	Escherichia_phage	6.1e-27	98.4
WP_001317028.1\|3091712_3091907_-	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	5.8e-32	96.9
WP_000595429.1\|3091963_3092773_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	2.2e-104	69.9
WP_000102191.1\|3092765_3095435_-	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	2.0e-194	59.6
WP_001427414.1\|3095515_3095686_-	hypothetical protein	A0A0U2SHB5	Escherichia_phage	3.3e-23	89.3
WP_000560223.1\|3095685_3095907_-	killing protein KilR	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
WP_050437129.1\|3096331_3096484_-	DUF1391 family protein	M4QQ57	Salicola_phage	7.8e-08	55.3
WP_001253182.1\|3096864_3097329_-	helix-turn-helix domain-containing protein	A0A0U2QW76	Escherichia_phage	1.2e-54	69.5
WP_000171139.1\|3097433_3097709_+	helix-turn-helix domain-containing protein	A0A0U2S629	Escherichia_phage	1.4e-23	65.9
WP_000702023.1\|3097692_3098115_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	5.3e-70	95.0
WP_000788989.1\|3098991_3099738_+	ATP-binding protein	V5UQI5	Shigella_phage	2.8e-114	80.9
WP_001370676.1\|3099759_3100521_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.0e-120	90.5
WP_001151266.1\|3100536_3100953_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.6e-58	86.2
WP_001275735.1\|3100949_3101423_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	2.9e-64	74.8
WP_001204666.1\|3101745_3102324_+	sce7726 family protein	A0A0U2RXY7	Escherichia_phage	2.6e-104	100.0
WP_000156213.1\|3102283_3103381_-	hypothetical protein	A0A0U2S621	Escherichia_phage	9.5e-212	99.7
WP_085947598.1\|3103934_3105097_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.0e-51	40.6
WP_106901570.1\|3105167_3106649_+	host specificity protein J	Q687E8	Enterobacteria_phage	1.1e-250	93.5
WP_001230496.1\|3106715_3107315_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZE39	Stx2-converting_phage	1.3e-109	98.5
WP_032212694.1\|3107379_3108693_+\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	5.3e-76	98.2
WP_001023386.1\|3108694_3108964_+\|tail	phage tail protein	A0A1I9LJT0	Stx_converting_phage	6.0e-43	95.5
WP_122988840.1\|3109074_3109152_+	hypothetical protein	NA	NA	NA	NA
WP_122993102.1\|3109366_3110380_+	peptidase M85	NA	NA	NA	NA
WP_016241229.1\|3110750_3111065_-	DinI-like family protein	Q687E4	Enterobacteria_phage	2.4e-27	83.3
WP_000347482.1\|3111124_3112408_+	MHS family MFS transporter	NA	NA	NA	NA
WP_000214712.1\|3113993_3114197_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2
WP_000215549.1\|3114374_3115061_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000636571.1\|3115149_3115896_-	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_001370614.1\|3116032_3118078_+	peptidyl-dipeptidase Dcp	NA	NA	NA	NA
WP_001024746.1\|3118121_3118640_-	2-oxo-tetronate isomerase	NA	NA	NA	NA
WP_000671731.1\|3118915_3119308_+	YdeI family stress tolerance OB fold protein	NA	NA	NA	NA
WP_000592837.1\|3119562_3120453_+	diguanylate cyclase DgcZ	A0A127AWB9	Bacillus_phage	1.8e-19	37.7
WP_000901367.1\|3120671_3120767_-	protein MgtS	NA	NA	NA	NA
WP_001054189.1\|3120893_3122081_-	efflux MFS transporter YdeE	NA	NA	NA	NA
WP_000087216.1\|3122275_3123175_+	O-acetylserine/cysteine exporter	NA	NA	NA	NA
WP_106901571.1\|3123219_3123942_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_085948186.1\|3123934_3125091_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_000722571.1\|3125383_3125695_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_001370581.1\|3125809_3127132_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_001296721.1\|3127159_3127471_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_001022785.1\|3127526_3129200_+	carbohydrate porin	NA	NA	NA	NA
WP_096910863.1\|3130945_3132159_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.3e-166	97.3
3131811:3131826	attR	NA	NA	NA	NA

DBSCAN-SWA_10

3321317 : 3405563

100

Enterobacteria_phage(32.05%)

protease,tail,transposase,holin,terminase,integrase,portal

attL 3344289:3344306|attR 3397637:3397654

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000837940.1\|3321317_3322451_+	porin OmpN	Q1MVN1	Enterobacteria_phage	6.3e-118	59.1
WP_001295593.1\|3322591_3323026_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
WP_085948186.1\|3323880_3325036_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_000731236.1\|3325451_3325796_-	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
WP_000411802.1\|3325800_3326007_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_000023191.1\|3326454_3328305_-	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	98.9
WP_157744807.1\|3328290_3328434_+	hypothetical protein	H6WZJ8	Escherichia_phage	4.0e-14	92.1
WP_001359877.1\|3328783_3329215_-	tellurite resistance protein	H6WZJ6	Escherichia_phage	3.6e-66	96.5
WP_000301797.1\|3329665_3330379_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000917748.1\|3330514_3330712_-	hypothetical protein	S5MQK8	Escherichia_phage	1.5e-27	95.4
WP_000640035.1\|3330936_3331491_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.0e-65	67.4
WP_001217447.1\|3331499_3331859_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.0e-37	63.5
WP_001265229.1\|3331871_3332921_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.2e-110	54.6
WP_000191872.1\|3332922_3333195_-	hypothetical protein	S4TNP0	Salmonella_phage	1.1e-12	53.0
WP_000756596.1\|3333316_3333661_-	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
WP_000935259.1\|3333780_3333993_-	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	6.0e-30	100.0
WP_000104475.1\|3334226_3334784_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	2.4e-33	41.3
WP_000683609.1\|3334785_3335004_-	DUF4014 family protein	A0A2R2Z311	Escherichia_phage	2.3e-21	72.2
WP_001289673.1\|3335131_3335443_-	hypothetical protein	A0A0U2QV73	Escherichia_phage	7.2e-56	92.2
WP_000699809.1\|3335435_3335663_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
WP_000603384.1\|3335659_3335941_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.0e-29	73.6
WP_000450627.1\|3335973_3336690_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	3.3e-72	62.8
WP_000139447.1\|3336723_3337185_-	replication protein	A0A0U2JGJ0	Escherichia_phage	4.0e-79	90.2
WP_001262401.1\|3337177_3338245_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	1.9e-84	85.3
WP_000693878.1\|3338313_3338739_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000747948.1\|3338722_3338965_-	hypothetical protein	H9C161	Pectobacterium_phage	4.8e-07	55.8
WP_001416688.1\|3339356_3339695_+	peptidase S24	H9C160	Pectobacterium_phage	1.9e-06	30.1
WP_000380316.1\|3339987_3340140_+	DUF1391 family protein	M4QQ57	Salicola_phage	5.1e-07	53.2
WP_000394548.1\|3340151_3340790_+	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-07	41.9
WP_001133037.1\|3340790_3341000_-	hypothetical protein	NA	NA	NA	NA
WP_000449175.1\|3341564_3341753_+	cell division inhibitor	NA	NA	NA	NA
WP_000199475.1\|3341749_3341938_+	DUF1482 family protein	NA	NA	NA	NA
3344289:3344306	attL	NA	NA	NA	NA
WP_085948186.1\|3344672_3345828_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_048258936.1\|3345821_3346085_+	excisionase family protein	S4TND0	Salmonella_phage	5.4e-12	50.8
WP_001206148.1\|3346104_3347400_+\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	2.5e-155	62.3
WP_120795384.1\|3348050_3348164_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|3348232_3348466_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000086528.1\|3348782_3349370_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	6.1e-24	39.3
WP_085948186.1\|3349575_3350732_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_001370405.1\|3350788_3351310_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.3e-91	95.9
WP_072004194.1\|3351309_3354264_-\|tail	phage tail protein	U5N099	Enterobacteria_phage	6.0e-67	80.7
WP_001230525.1\|3354328_3354928_-	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	8.8e-111	98.0
WP_000515486.1\|3354994_3358393_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	88.6
WP_001399694.1\|3358453_3359101_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.2e-110	96.7
WP_000140752.1\|3358998_3359742_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.5e-147	97.2
WP_001152409.1\|3359747_3360446_-\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	2.3e-134	99.6
WP_000447255.1\|3360455_3360785_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	8.6e-60	99.1
WP_000372036.1\|3360784_3363850_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	98.7
WP_001161009.1\|3363821_3364151_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_001370402.1\|3364159_3364546_-\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	4.9e-62	96.1
WP_000211089.1\|3364606_3365350_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	4.0e-129	96.8
WP_001079398.1\|3365361_3365763_-\|tail	tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
WP_000677106.1\|3365759_3366338_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	4.2e-102	100.0
WP_001283147.1\|3366349_3366625_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	1.1e-44	98.9
WP_001097046.1\|3366617_3366941_-	DUF2190 family protein	A5LH31	Enterobacteria_phage	8.5e-52	100.0
WP_159031908.1\|3368999_3370487_-\|portal	phage portal protein	A5LH29	Enterobacteria_phage	4.8e-283	99.6
WP_001072975.1\|3370508_3370721_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_000133409.1\|3372203_3372485_-	hypothetical protein	NA	NA	NA	NA
WP_032209815.1\|3372742_3374632_-\|protease	Clp protease ClpP	Q8VNN5	Enterobacteria_phage	9.4e-183	51.5
WP_001302595.1\|3374715_3374862_+	hypothetical protein	NA	NA	NA	NA
WP_000126660.1\|3375290_3375713_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_001399692.1\|3375709_3375955_-	hypothetical protein	NA	NA	NA	NA
WP_000833609.1\|3376242_3378069_-	DNA primase	Q7M2A8	Enterobacteria_phage	2.0e-129	50.7
WP_001261504.1\|3378065_3378365_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_001113138.1\|3378371_3378692_-	hypothetical protein	NA	NA	NA	NA
WP_024200973.1\|3378684_3378948_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_000179578.1\|3379085_3379391_+	hypothetical protein	NA	NA	NA	NA
WP_000130338.1\|3379448_3379646_+	hypothetical protein	NA	NA	NA	NA
WP_001038673.1\|3379766_3380345_-	hypothetical protein	A0A1W6JPH8	Morganella_phage	4.9e-58	65.4
WP_000229066.1\|3380404_3380629_-	hypothetical protein	NA	NA	NA	NA
WP_000114064.1\|3380621_3381860_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	6.6e-60	35.1
WP_001399690.1\|3381977_3382949_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.1e-182	99.7
WP_000421825.1\|3383023_3383563_-	DUF1441 family protein	A5LH26	Enterobacteria_phage	1.8e-94	100.0
WP_001031431.1\|3384115_3384322_-	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	6.7e-26	91.2
WP_000035577.1\|3384622_3385033_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	1.2e-63	89.7
WP_001019140.1\|3385184_3385358_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_001309517.1\|3385529_3385685_-	hypothetical protein	NA	NA	NA	NA
WP_120795388.1\|3385765_3385831_-	Qin prophage; protein YnfR	NA	NA	NA	NA
WP_071524604.1\|3385833_3386022_-	cold-shock protein	NA	NA	NA	NA
WP_000066495.1\|3386032_3386245_-	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_001071769.1\|3386606_3387104_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
WP_001092971.1\|3387100_3387634_-	lysozyme	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
WP_087661054.1\|3387928_3389141_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_024025755.1\|3389259_3389475_-\|holin	holin	A5LH82	Enterobacteria_phage	5.5e-31	93.0
WP_000066485.1\|3390228_3390444_-	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	7.7e-25	76.5
WP_000087756.1\|3390744_3390957_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_120795389.1\|3391011_3391101_+	Qin prophage; protein YnfS	NA	NA	NA	NA
WP_000203370.1\|3391727_3391913_+	hypothetical protein	NA	NA	NA	NA
WP_001047121.1\|3393073_3393826_-	antitermination protein	K7PGU5	Enterobacteria_phage	2.1e-133	96.8
WP_012775982.1\|3394891_3395170_-	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
WP_087661054.1\|3395434_3396648_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_001296941.1\|3397929_3398166_+	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
3397637:3397654	attR	NA	NA	NA	NA
WP_000997984.1\|3398323_3399862_-\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.0e-296	99.0
WP_000612591.1\|3399911_3400259_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_001066422.1\|3400440_3401997_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.3e-161	56.0
WP_000631725.1\|3402016_3402364_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001341423.1\|3402360_3403035_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_000836078.1\|3403238_3403805_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	1.5e-11	30.2
WP_001370501.1\|3403816_3405031_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_001295395.1\|3405236_3405563_-	YnfA family protein	A0A218MNG8	uncultured_virus	7.6e-24	55.6

DBSCAN-SWA_11

3709550 : 3779928

Enterobacteria_phage(66.67%)

plate,transposase,tail,holin,terminase,head,capsid,tRNA,integrase,portal

attL 3745629:3745688|attR 3780873:3780994

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001025305.1\|3709550_3711284_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	5.7e-86	33.5
WP_001341423.1\|3711464_3712139_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_000631725.1\|3712135_3712483_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001066422.1\|3712502_3714059_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.3e-161	56.0
WP_001171554.1\|3714207_3714588_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
WP_000612591.1\|3714584_3714932_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_000997984.1\|3714981_3716520_+\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.0e-296	99.0
WP_001370468.1\|3716627_3717116_+	lysozyme inhibitor LprI family protein	NA	NA	NA	NA
WP_001259583.1\|3717235_3717628_-	flagellar protein FlhE	NA	NA	NA	NA
WP_000066983.1\|3717627_3719706_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_001278912.1\|3719698_3720847_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_000983611.1\|3721048_3721693_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_000763874.1\|3721703_3722093_-	chemotaxis protein CheY	A0A2K9L4R0	Tupanvirus	1.0e-06	34.6
WP_000036378.1\|3722107_3723157_-	chemotaxis response regulator protein-glutamate methylesterase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
WP_000204335.1\|3723159_3724020_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_000483246.1\|3724038_3725640_-	methyl-accepting chemotaxis protein IV	A0A2H4J162	uncultured_Caudovirales_phage	2.2e-15	29.9
WP_001370571.1\|3725685_3727347_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	7.6e-11	38.4
WP_000147302.1\|3727491_3727995_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_001355823.1\|3728015_3729980_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_000795630.1\|3729984_3730911_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_000906322.1\|3730907_3731795_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_001291603.1\|3731921_3732500_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_001295647.1\|3732502_3732853_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_000122426.1\|3733632_3734061_+	universal stress protein UspC	NA	NA	NA	NA
WP_001370485.1\|3734067_3735492_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_001295645.1\|3735466_3736267_-	trehalose-phosphatase	NA	NA	NA	NA
WP_000100203.1\|3736433_3737420_-	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_001187811.1\|3737434_3738949_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	4.3e-13	27.1
WP_000548675.1\|3739018_3740008_-	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000179469.1\|3740804_3741308_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000082127.1\|3741386_3741638_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_010723106.1\|3741752_3741839_-	stress response protein AzuC	NA	NA	NA	NA
WP_001237866.1\|3742101_3742425_+	hypothetical protein	NA	NA	NA	NA
WP_000917208.1\|3742595_3743093_+	non-heme ferritin	NA	NA	NA	NA
WP_000377225.1\|3743130_3743370_-	YecH family protein	NA	NA	NA	NA
WP_000797573.1\|3743560_3744772_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_000847902.1\|3744833_3745499_-	UPF0149 family protein YecA	NA	NA	NA	NA
3745629:3745688	attL	NA	NA	NA	NA
WP_001300279.1\|3745856_3746858_-\|integrase	tyrosine-type recombinase/integrase	Q94N03	Haemophilus_virus	4.2e-105	58.5
WP_000865386.1\|3746863_3747211_-	DUF2511 domain-containing protein	NA	NA	NA	NA
WP_000786769.1\|3747906_3748311_-	transcriptional regulator	Q6QID2	Burkholderia_phage	1.6e-23	53.8
WP_001673482.1\|3748400_3748538_-	hypothetical protein	NA	NA	NA	NA
WP_000014504.1\|3748609_3748813_+	DNA-binding protein	P79674	Haemophilus_phage	3.1e-07	45.2
WP_000739029.1\|3748834_3749185_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	8.6e-50	81.9
WP_000159467.1\|3749195_3749474_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	5.3e-34	80.4
WP_000514274.1\|3749485_3749728_+	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	6.8e-38	98.8
WP_000021655.1\|3749724_3749838_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	6.2e-10	100.0
WP_029594336.1\|3749952_3750348_+	hypothetical protein	NA	NA	NA	NA
WP_000985144.1\|3750371_3750575_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	5.5e-25	80.6
WP_000153711.1\|3750571_3750838_+	winged helix-turn-helix transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	3.4e-30	75.9
WP_000108347.1\|3750834_3751134_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	9.0e-40	86.9
WP_122985482.1\|3751145_3751763_+	hypothetical protein	S5MQL6	Escherichia_phage	2.1e-06	37.8
WP_000564228.1\|3751759_3752149_+	hypothetical protein	NA	NA	NA	NA
WP_000686474.1\|3755063_3756023_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	6.4e-180	99.1
WP_000211270.1\|3756027_3756339_+	chromosome partitioning protein	A0A0A7NPT5	Enterobacteria_phage	4.2e-48	94.2
WP_001289970.1\|3756402_3756786_+	ead/Ea22-like family protein	Q8HAA6	Salmonella_phage	9.8e-31	50.0
WP_000711111.1\|3756877_3757408_-	hypothetical protein	NA	NA	NA	NA
WP_000087807.1\|3757937_3758984_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	6.3e-205	99.4
WP_032209856.1\|3758983_3760735_-	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
WP_001262656.1\|3760889_3761726_+\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.5e-148	98.6
WP_001055112.1\|3761749_3762802_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	2.9e-194	97.4
WP_000632364.1\|3762847_3763648_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	3.3e-137	97.4
WP_000063078.1\|3763750_3764245_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	2.3e-88	98.2
WP_000864901.1\|3764244_3764445_+\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_000104342.1\|3764447_3764771_+\|holin	phage holin, lambda family	A0A0A7NRY9	Enterobacteria_phage	4.2e-51	100.0
WP_000072327.1\|3764767_3765160_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_000780572.1\|3765156_3765564_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	9.0e-67	99.3
WP_032209860.1\|3765701_3766169_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	1.3e-85	99.4
WP_032209862.1\|3766161_3766797_+\|tail	tail protein	A0A0A7NV60	Enterobacteria_phage	4.5e-113	98.6
WP_001271900.1\|3766793_3767375_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.4e-100	96.9
WP_000213447.1\|3767371_3767722_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
WP_001111920.1\|3767725_3768622_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	5.7e-154	97.7
WP_000071720.1\|3768614_3769145_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.1e-93	99.4
WP_000108489.1\|3769147_3771148_+\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	4.6e-111	97.6
WP_000885638.1\|3771147_3771765_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.0e-85	80.9
WP_001447286.1\|3771728_3772274_-	transferase	NA	NA	NA	NA
WP_000853431.1\|3772952_3775760_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	92.7
WP_000333494.1\|3775746_3775902_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	2.0e-22	98.0
WP_000665308.1\|3775910_3776276_-\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	3.8e-56	97.5
WP_000290450.1\|3776330_3776843_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
WP_000005425.1\|3776842_3778027_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	4.4e-223	98.0
WP_000132830.1\|3778184_3779294_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	1.3e-195	94.9
WP_000488108.1\|3779336_3779597_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000078920.1\|3779787_3779928_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0
3780873:3780994	attR	NA	NA	NA	NA

DBSCAN-SWA_12

3927898 : 3936188

Moumouvirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000414659.1\|3927898_3929002_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2P1ELT3	Moumouvirus	2.7e-28	32.1
WP_086163603.1\|3929001_3929901_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	1.8e-107	64.7
WP_000697837.1\|3929867_3930956_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.5e-95	50.3
WP_000875590.1\|3930958_3931987_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	E3T4Y8	Cafeteria_roenbergensis_virus	4.5e-70	45.1
WP_000009507.1\|3932023_3933304_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	A0A218MKK1	uncultured_virus	2.1e-08	24.7
WP_000183035.1\|3933725_3934619_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	3.9e-46	42.0
WP_001115962.1\|3934793_3936188_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	4.9e-19	31.9

DBSCAN-SWA_13

4027985 : 4037427

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001370574.1\|4027985_4029122_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	3.2e-162	97.4
WP_001370558.1\|4029118_4031119_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001295429.1\|4031243_4031705_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_001370504.1\|4031745_4032216_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.1e-81	99.4
WP_000598641.1\|4032262_4032982_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|4032978_4034664_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240401.1\|4034885_4035617_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|4035676_4035784_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|4035764_4036496_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569358.1\|4036500_4037427_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8

DBSCAN-SWA_14

4248212 : 4348484

110

Escherichia_phage(57.65%)

bacteriocin,protease,tail,transposase,holin,tRNA,integrase,capsid

attL 4279760:4279784|attR 4348679:4348703

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001283581.1\|4248212_4249025_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289165.1\|4249024_4250038_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000615813.1\|4251339_4252335_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127745.1\|4252331_4253510_-	MFS transporter	NA	NA	NA	NA
WP_000817184.1\|4253793_4255014_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_000683817.1\|4255172_4257179_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559764.1\|4257299_4257578_-	YfcL family protein	NA	NA	NA	NA
WP_001089241.1\|4257611_4258160_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_000447367.1\|4258159_4258969_-	TSUP family transporter	NA	NA	NA	NA
WP_001043819.1\|4258968_4259793_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_000918470.1\|4259796_4260882_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
WP_001300582.1\|4260916_4261849_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730806.1\|4262014_4262566_+	endonuclease SmrB	NA	NA	NA	NA
WP_001370480.1\|4262637_4263489_-	DUF2544 domain-containing protein	NA	NA	NA	NA
WP_000844751.1\|4263490_4264030_-	fimbrial protein	NA	NA	NA	NA
WP_000714139.1\|4264026_4264515_-	fimbrial protein	NA	NA	NA	NA
WP_000018471.1\|4264511_4265021_-	fimbrial protein	NA	NA	NA	NA
WP_000482743.1\|4265036_4265789_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000033328.1\|4268531_4269095_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_001195819.1\|4269778_4270264_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_000426163.1\|4270466_4272611_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_000531955.1\|4272610_4273921_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_000030901.1\|4274101_4274386_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001296861.1\|4274757_4276098_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_032209956.1\|4276463_4277522_+	hypothetical protein	NA	NA	NA	NA
WP_000776768.1\|4277703_4278459_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_000368131.1\|4278752_4279685_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
4279760:4279784	attL	NA	NA	NA	NA
WP_000885695.1\|4279907_4288283_-	hypothetical protein	A0A0P0ZCC7	Stx2-converting_phage	0.0e+00	97.0
WP_001370495.1\|4288351_4289344_-	hypothetical protein	A0A2L1IV65	Escherichia_phage	3.3e-163	90.0
WP_085948186.1\|4289416_4290573_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_032210112.1\|4290894_4291146_-\|bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	1.1e-11	94.7
WP_000455646.1\|4291155_4291602_-	hypothetical protein	A0A2L1IV89	Escherichia_phage	1.3e-74	97.3
WP_106901560.1\|4291604_4292258_-	hypothetical protein	Q08J74	Stx2-converting_phage	3.1e-109	96.3
WP_000035554.1\|4292351_4292753_-	hypothetical protein	A0A2L1IV61	Escherichia_phage	3.9e-70	97.0
WP_000682942.1\|4293182_4293905_-	Ail/Lom family outer membrane beta-barrel protein	A0A2L1IV31	Escherichia_phage	9.0e-102	76.7
WP_001399382.1\|4294051_4294609_-	hypothetical protein	Q08J77	Stx2-converting_phage	5.5e-107	98.9
WP_001369201.1\|4294614_4294896_-	hypothetical protein	Q08J78	Stx2-converting_phage	3.1e-50	100.0
WP_000162956.1\|4294910_4296179_-	host specificity protein J	Q08J79	Stx2-converting_phage	9.9e-221	100.0
WP_106901526.1\|4297169_4298325_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_001370566.1\|4299371_4299551_-	hypothetical protein	A0A2R2Z344	Escherichia_phage	2.8e-28	100.0
WP_001023433.1\|4299688_4299958_-\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	6.4e-45	98.9
WP_000117996.1\|4299959_4301798_-\|tail	tail fiber protein	A0A1I9LJS9	Stx_converting_phage	1.0e-64	100.0
WP_000207919.1\|4301794_4302445_-	hypothetical protein	A0A0H4J3F2	Shigella_phage	3.9e-120	99.5
WP_000829203.1\|4302444_4303008_-	hypothetical protein	A0A0P0ZGG2	Escherichia_phage	7.0e-102	99.5
WP_001370499.1\|4302991_4303453_-	hypothetical protein	A0A2R2Z354	Escherichia_phage	3.3e-73	94.8
WP_001140444.1\|4303503_4303893_-	hypothetical protein	V5UT93	Shigella_phage	9.9e-63	100.0
WP_000214470.1\|4303947_4305162_-\|capsid	N4-gp56 family major capsid protein	A0A2R2Z358	Escherichia_phage	1.1e-232	99.5
WP_000345010.1\|4305185_4306193_-	hypothetical protein	A0A2R2Z355	Escherichia_phage	2.3e-180	100.0
WP_000787524.1\|4306350_4308495_-	hypothetical protein	A0A2R2Z346	Escherichia_phage	0.0e+00	99.9
WP_087661054.1\|4309356_4310569_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_001086087.1\|4311495_4312302_-	hypothetical protein	A0A1U9AJA9	Stx1_converting_phage	1.1e-132	99.3
WP_001109019.1\|4312594_4313146_-	Rha family transcriptional regulator	A0A0P0ZFJ1	Escherichia_phage	4.5e-101	100.0
WP_012816791.1\|4313373_4313559_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_000455406.1\|4313786_4313936_-	hypothetical protein	A0A0P0ZFU6	Escherichia_phage	2.4e-17	100.0
WP_106901561.1\|4313935_4314484_-	hypothetical protein	A0A1U9AJ99	Stx1_converting_phage	3.0e-89	99.4
WP_096910863.1\|4314480_4315694_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.3e-166	97.3
WP_000087714.1\|4316092_4316626_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.0e-102	99.4
WP_000284510.1\|4316630_4316846_-\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_001290216.1\|4316922_4317195_-	DUF826 domain-containing protein	A0A0P0ZC09	Stx2-converting_phage	3.1e-23	98.9
WP_000143462.1\|4317235_4317415_-	DUF1378 family protein	A0A0P0ZCJ7	Stx2-converting_phage	3.7e-25	100.0
WP_106901562.1\|4317550_4319251_-	sialate O-acetylesterase	G9L6J1	Escherichia_phage	0.0e+00	99.5
WP_085948186.1\|4319369_4320526_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_000738068.1\|4321241_4321511_-	Shiga toxin Stx2a subunit B	A0A2R2Z326	Escherichia_phage	1.2e-43	100.0
WP_000649753.1\|4321522_4322482_-	Shiga toxin Stx2c subunit A	Q776Q3	Enterobacteria_phage	5.6e-176	100.0
WP_001356551.1\|4322864_4323017_-	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
WP_001204859.1\|4323265_4323700_-	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	4.8e-82	100.0
WP_000144767.1\|4323692_4323887_-	protein ninH	A0A0P0ZGE1	Escherichia_phage	8.4e-31	100.0
WP_001108009.1\|4323883_4324489_-	recombination protein NinG	Q8VNP2	Enterobacteria_phage	2.4e-95	98.0
WP_001004008.1\|4324488_4325211_-	DNA-binding protein	A0A0P0ZCB2	Stx2-converting_phage	3.9e-129	99.6
WP_000178727.1\|4325285_4325960_-	phage antirepressor Ant	A0A0P0ZDQ5	Stx2-converting_phage	6.2e-113	88.8
WP_000201604.1\|4326225_4326591_-	ORF6N domain-containing protein	A0A0N7C203	Escherichia_phage	3.7e-43	96.7
WP_001254258.1\|4326847_4327042_-	NinE family protein	A0A0P0ZC71	Stx2-converting_phage	2.9e-31	100.0
WP_000153293.1\|4327038_4327566_-	phage N-6-adenine-methyltransferase	G9L688	Escherichia_phage	9.5e-101	100.0
WP_000573864.1\|4327562_4328165_-	endonuclease	G9L687	Escherichia_phage	1.7e-114	100.0
WP_001229012.1\|4328157_4328574_-	NinB protein	G9L686	Escherichia_phage	3.9e-73	100.0
WP_000103680.1\|4328747_4328963_-	hypothetical protein	G9L684	Escherichia_phage	2.2e-32	100.0
WP_000818843.1\|4329107_4329314_-	hypothetical protein	G9L683	Escherichia_phage	2.7e-27	100.0
WP_001036028.1\|4329386_4329656_-	hypothetical protein	G9L682	Escherichia_phage	2.9e-45	100.0
WP_001248397.1\|4329652_4332046_-	DNA helicase	G9L681	Escherichia_phage	0.0e+00	99.7
WP_000431329.1\|4332042_4332930_-	hypothetical protein	G9L680	Escherichia_phage	2.8e-145	99.7
WP_001244621.1\|4332992_4333265_-	hypothetical protein	G9L679	Escherichia_phage	2.7e-43	100.0
WP_000438537.1\|4333287_4333587_-	hypothetical protein	A0A0P0ZBJ0	Stx2-converting_phage	1.3e-49	100.0
WP_001180318.1\|4333693_4333921_-	transcriptional regulator	G9L677	Escherichia_phage	7.8e-36	100.0
WP_106901563.1\|4333999_4334707_+	helix-turn-helix transcriptional regulator	G9L676	Escherichia_phage	5.7e-133	99.1
WP_000885926.1\|4334767_4335109_+	DUF3024 domain-containing protein	G9L675	Escherichia_phage	2.5e-62	99.1
WP_001189994.1\|4335295_4336114_+	NYN domain-containing protein	A4JWQ6	Burkholderia_virus	3.3e-36	46.2
WP_001370067.1\|4336562_4336904_+	hypothetical protein	F1C5C1	Cronobacter_phage	2.5e-30	66.4
WP_096910863.1\|4337064_4338278_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.3e-166	97.3
WP_157910050.1\|4338315_4338852_+	hypothetical protein	K7PKU5	Enterobacteria_phage	1.1e-88	94.8
WP_000065353.1\|4339032_4339401_+	DUF2528 family protein	A0A1U9AJB3	Stx1_converting_phage	2.6e-65	99.2
WP_001198858.1\|4339473_4339614_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	3.3e-21	100.0
WP_000361831.1\|4339606_4339720_+	host cell division inhibitory peptide Kil	G9L669	Escherichia_phage	2.7e-13	100.0
WP_000613346.1\|4339716_4339905_+	hypothetical protein	G9L668	Escherichia_phage	2.2e-28	100.0
WP_000536228.1\|4339913_4340594_+	AAA family ATPase	G9L667	Escherichia_phage	3.4e-127	100.0
WP_000073097.1\|4340590_4341178_+	hypothetical protein	G9L666	Escherichia_phage	9.9e-107	100.0
WP_001111288.1\|4341201_4341498_+	DUF2856 family protein	G9L665	Escherichia_phage	9.5e-50	100.0
WP_001370500.1\|4341508_4341673_+	DUF2737 family protein	K7P7R0	Enterobacteria_phage	9.3e-23	98.1
WP_000812196.1\|4341669_4342278_+	hypothetical protein	A0A0P0ZFU9	Escherichia_phage	1.0e-82	93.6
WP_000034212.1\|4342274_4342682_+	ead/Ea22-like family protein	A0A125RPT9	Escherichia_phage	1.3e-70	100.0
WP_001014298.1\|4342683_4342875_+	hypothetical protein	A0A0P0ZG45	Escherichia_phage	3.3e-27	100.0
WP_000206782.1\|4342877_4343336_+	hypothetical protein	V5UT79	Shigella_phage	7.1e-20	54.5
WP_000224734.1\|4343341_4343539_+	hypothetical protein	A0A222YWL3	Escherichia_phage	3.2e-25	93.4
WP_000628763.1\|4344052_4344928_+	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	5.4e-141	86.1
WP_000969524.1\|4344924_4345185_+	hypothetical protein	A0A077SLR0	Escherichia_phage	1.9e-41	98.8
WP_000002101.1\|4345184_4345469_+	ASCH domain-containing protein	A0A0P0ZDM1	Stx2-converting_phage	7.7e-49	97.9
WP_000609349.1\|4345517_4346186_+	hypothetical protein	A0A0P0ZDC0	Stx2-converting_phage	1.1e-104	95.2
WP_001291844.1\|4346426_4346639_+	DUF1382 family protein	A0A2R2X2A7	Escherichia_phage	7.1e-31	100.0
WP_000994805.1\|4346674_4347070_+	DUF1627 domain-containing protein	A0A2R2Z2X7	Escherichia_phage	2.0e-50	95.4
WP_000453637.1\|4347148_4347331_+	helix-turn-helix domain-containing protein	A0A2R2Z2X2	Escherichia_phage	4.1e-27	100.0
WP_001218308.1\|4347314_4348484_-\|integrase	site-specific integrase	A0A2R2Z2Y0	Escherichia_phage	1.7e-230	100.0
4348679:4348703	attR	NA	NA	NA	NA

DBSCAN-SWA_15

4570812 : 4672537

Stx2-converting_phage(40.43%)

tail,transposase,holin,terminase,capsid,tRNA,integrase,head

attL 4655627:4655643|attR 4679935:4679951

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001370572.1\|4570812_4571550_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219193.1\|4571681_4573016_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_001370459.1\|4573224_4574106_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001616362.1\|4574208_4574796_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627807.1\|4574851_4575235_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	1.4e-32	72.0
WP_001262716.1\|4575539_4576229_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	7.1e-56	48.8
WP_000997403.1\|4576276_4577314_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098726.1\|4577520_4577940_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_001370531.1\|4578008_4578707_+	DTW domain-containing protein	NA	NA	NA	NA
WP_000082964.1\|4578738_4581399_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949265.1\|4581512_4582868_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_001300818.1\|4582913_4583237_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000841103.1\|4583233_4584532_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	1.3e-45	32.2
WP_001235102.1\|4590305_4592879_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000040122.1\|4593008_4593740_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079092.1\|4593736_4594717_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197674.1\|4594851_4595589_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178456.1\|4595859_4596201_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001386991.1\|4596304_4596352_+	hypothetical protein	NA	NA	NA	NA
WP_000200116.1\|4596450_4597611_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000225221.1\|4597653_4598775_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168045.1\|4598785_4599856_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_001370532.1\|4600064_4600430_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001212391.1\|4600579_4601098_+	YfiR family protein	NA	NA	NA	NA
WP_000589828.1\|4602329_4602812_+	OmpA family protein	NA	NA	NA	NA
WP_000065253.1\|4602888_4603236_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000264777.1\|4603277_4604045_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043335.1\|4604075_4604624_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_032210152.1\|4604642_4604891_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460035.1\|4605028_4606390_-	signal recognition particle protein	NA	NA	NA	NA
WP_001338897.1\|4606556_4607348_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_024026167.1\|4607368_4608655_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001307957.1\|4608709_4609303_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059169.1\|4609425_4610304_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880910.1\|4610389_4612051_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203437.1\|4612199_4612541_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001117838.1\|4612602_4612893_-	RnfH family protein	NA	NA	NA	NA
WP_000600190.1\|4612882_4613359_-	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_000162574.1\|4613490_4613973_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_085948186.1\|4615927_4617083_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_001370486.1\|4618732_4622134_-	type III secretion system effector EspN	A0A0N7KZG3	Stx2-converting_phage	1.3e-219	39.3
WP_001370516.1\|4622725_4625074_-	type III secretion system effector E3 ubiquitin ligase NleL	NA	NA	NA	NA
WP_115801847.1\|4625093_4625183_-	hypothetical protein	NA	NA	NA	NA
WP_001023386.1\|4625289_4625559_-\|tail	phage tail protein	A0A1I9LJT0	Stx_converting_phage	6.0e-43	95.5
WP_032212694.1\|4625560_4626874_-\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	5.3e-76	98.2
WP_001230532.1\|4626938_4627538_-	Ail/Lom family outer membrane beta-barrel protein	B6ETG5	Enterobacteria_phage	4.4e-110	99.0
WP_106901565.1\|4627604_4631078_-	host specificity protein J	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	98.1
WP_000649829.1\|4631211_4631739_+	superoxide dismutase family protein	Q9MC02	Salmonella_phage	1.8e-59	60.5
WP_122994351.1\|4631926_4632559_-\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.2e-97	94.3
WP_032212700.1\|4632504_4633248_-\|tail	phage tail protein	H6WZM4	Escherichia_phage	2.3e-148	98.0
WP_032212666.1\|4633258_4633957_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	3.1e-131	97.8
WP_000807954.1\|4633956_4634298_-\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
WP_000212947.1\|4634290_4637533_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	95.6
WP_001453698.1\|4637584_4637794_-	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_000710949.1\|4637889_4638264_-\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
WP_001275482.1\|4638278_4638995_-\|tail	tail protein	B6DZA6	Enterobacteria_phage	6.2e-127	99.2
WP_000133388.1\|4639060_4639405_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_000573374.1\|4639401_4639848_-	HK97 gp10 family phage protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
WP_001007905.1\|4639844_4640195_-\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000125984.1\|4640205_4640532_-\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
WP_001063025.1\|4643058_4643280_-	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
WP_000173032.1\|4643324_4645262_-\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	99.5
WP_000958402.1\|4646984_4647548_-\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	4.0e-89	98.4
WP_086260344.1\|4647663_4648194_-	HNH endonuclease	H6WZK7	Escherichia_phage	1.3e-86	90.3
WP_000095749.1\|4648235_4648463_+	DUF3950 domain-containing protein	A0A0P0ZCA1	Stx2-converting_phage	3.9e-35	100.0
WP_000736096.1\|4648831_4649056_-	hypothetical protein	NA	NA	NA	NA
WP_047091958.1\|4649141_4649327_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.3e-17	98.3
WP_001043239.1\|4649548_4649767_-	hypothetical protein	Q687G2	Enterobacteria_phage	1.0e-16	93.3
WP_000992122.1\|4649844_4650378_-	lysozyme	A0A0N7KZF9	Stx2-converting_phage	2.8e-100	98.3
WP_000731236.1\|4650428_4650773_-	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
WP_000411795.1\|4650777_4650984_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.0e-30	98.5
WP_000143014.1\|4651276_4653130_-	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	0.0e+00	95.9
WP_001344632.1\|4653572_4653704_-	DUF3927 family protein	H6WZJ7	Escherichia_phage	5.2e-08	85.7
WP_000101315.1\|4654335_4655739_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
4655627:4655643	attL	NA	NA	NA	NA
WP_101329723.1\|4655785_4656676_-	DNA methyltransferase	A0A0P0YLW3	Yellowstone_lake_mimivirus	4.9e-17	29.0
WP_001205467.1\|4656727_4657078_-	antitermination protein Q	A0A0P0ZCW0	Stx2-converting_phage	6.8e-55	89.1
WP_001399360.1\|4657077_4657320_-	hypothetical protein	Q8W639	Enterobacteria_phage	2.1e-34	97.5
WP_001258395.1\|4657561_4658422_-	hypothetical protein	A0A1B5FPA6	Escherichia_phage	8.6e-160	97.2
WP_000844622.1\|4658421_4659390_-	DNA primase	A0A1B5FPA8	Escherichia_phage	2.3e-185	98.8
WP_000424040.1\|4659391_4661050_-	DEAD/DEAH box helicase	A0A1B5FPA4	Escherichia_phage	0.0e+00	98.7
WP_096910863.1\|4661899_4663112_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.3e-166	97.3
WP_106901566.1\|4663557_4664811_-	hypothetical protein	NA	NA	NA	NA
WP_000413407.1\|4665206_4665620_-	hypothetical protein	NA	NA	NA	NA
WP_024174260.1\|4665734_4666130_-	hypothetical protein	NA	NA	NA	NA
WP_087661054.1\|4667567_4668780_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_001370696.1\|4669969_4671103_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_000998846.1\|4671111_4671333_-	hypothetical protein	NA	NA	NA	NA
WP_001234104.1\|4671325_4672537_-\|integrase	site-specific integrase	NA	NA	NA	NA
4679935:4679951	attR	NA	NA	NA	NA

DBSCAN-SWA_16

4753971 : 4761111

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272924.1\|4753971_4756533_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
WP_001141315.1\|4756638_4757295_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	4.3e-50	46.8
WP_001297141.1\|4757345_4758113_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
WP_000847985.1\|4758308_4759217_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_000590409.1\|4759213_4760476_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	4.4e-136	61.7
WP_001278994.1\|4760472_4761111_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0

DBSCAN-SWA_17

4985010 : 5024043

Stx2-converting_phage(45.45%)

tRNA,integrase,protease,transposase

attL 4993043:4993057|attR 5011168:5011182

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001370180.1\|4985010_4985508_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_000286500.1\|4985602_4986310_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222508.1\|4986389_4987121_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593273.1\|4987133_4988084_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|4988192_4988756_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017112.1\|4988755_4989202_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_101329719.1\|4989410_4990385_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|4990357_4991062_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|4991079_4991646_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|4991642_4991933_+	YggU family protein	NA	NA	NA	NA
WP_001174739.1\|4991940_4992534_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239917.1\|4992526_4993663_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
4993043:4993057	attL	NA	NA	NA	NA
WP_000784004.1\|4993976_4994963_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_000577033.1\|4995007_4995511_+	TRAP transporter small permease	NA	NA	NA	NA
WP_106901573.1\|4995553_4996813_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_000745214.1\|4996868_4997876_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394120.1\|4997992_4999039_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|4999214_4999934_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001178593.1\|4999954_5000095_-	hypothetical protein	NA	NA	NA	NA
WP_001107564.1\|5000117_5000444_-	YggL family protein	NA	NA	NA	NA
WP_000786911.1\|5000443_5001163_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001298922.1\|5001323_5002376_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|5002403_5002679_+	oxidative damage protection protein	NA	NA	NA	NA
WP_001298916.1\|5002743_5003823_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001049791.1\|5004024_5005281_+	nucleoside permease	NA	NA	NA	NA
WP_001370231.1\|5005329_5007465_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234502.1\|5007862_5008570_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218841.1\|5008948_5010214_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.7e-77	38.3
WP_000997985.1\|5010330_5011869_-\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	8.7e-296	99.0
5011168:5011182	attR	NA	NA	NA	NA
WP_106901533.1\|5011977_5012652_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_000631725.1\|5012648_5012996_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001066419.1\|5013015_5014572_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.3e-161	56.2
WP_000839246.1\|5014832_5015030_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_000777666.1\|5015041_5015530_-	hypothetical protein	NA	NA	NA	NA
WP_000854916.1\|5015526_5015904_-	toxin	NA	NA	NA	NA
WP_024174207.1\|5015950_5016325_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000692312.1\|5016487_5016709_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	8.5e-11	45.8
WP_077633701.1\|5016777_5016945_-	DNA repair protein RadC	NA	NA	NA	NA
WP_000624681.1\|5018227_5018578_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.8e-39	65.5
WP_000422707.1\|5018574_5019000_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.9e-47	97.9
WP_096910863.1\|5019522_5020735_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.3e-166	97.3
WP_000953521.1\|5021748_5023113_-	EspK/GogB family type III secretion system effector	Q9MBM1	Phage_Gifsy-1	7.3e-52	29.5
WP_001145628.1\|5023404_5024043_-	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	9.0e-45	42.7

DBSCAN-SWA_18

5173110 : 5232101

Caulobacter_phage(14.29%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000708503.1\|5173110_5174349_+\|tRNA	fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca	A0A0F6YPT7	Sinorhizobium_phage	1.3e-92	51.3
WP_001305111.1\|5174511_5175333_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_001295541.1\|5175422_5175791_-	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
WP_001272796.1\|5175895_5176513_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_000935214.1\|5176525_5177458_-	DNA-binding transcriptional activator TtdR	NA	NA	NA	NA
WP_000986797.1\|5177664_5178576_+	L(+)-tartrate dehydratase subunit alpha	NA	NA	NA	NA
WP_000722957.1\|5178572_5179178_+	L(+)-tartrate dehydratase subunit beta	NA	NA	NA	NA
WP_000804928.1\|5179226_5180690_+	anion permease	NA	NA	NA	NA
WP_001264365.1\|5180732_5181746_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.8e-109	59.2
WP_001144069.1\|5181983_5182199_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_000918827.1\|5182309_5184055_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.1e-76	38.4
WP_000437371.1\|5184249_5186091_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.3e-35	33.7
WP_000228937.1\|5186169_5186676_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_001274557.1\|5186975_5187821_-	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_000772026.1\|5187905_5188103_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_001054228.1\|5188122_5188611_-	hypothetical protein	NA	NA	NA	NA
WP_000854687.1\|5188607_5188988_-	toxin	NA	NA	NA	NA
WP_001443392.1\|5189076_5189445_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000692312.1\|5189520_5189742_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	8.5e-11	45.8
WP_001186728.1\|5189804_5190281_-	RadC family protein	NA	NA	NA	NA
WP_000855068.1\|5190296_5190770_-	antirestriction protein	A9J566	Pseudomonas_phage	2.5e-12	30.5
WP_001164974.1\|5190863_5191109_-	hypothetical protein	NA	NA	NA	NA
WP_001243192.1\|5191667_5193446_-	reverse transcriptase	A0A0U4J920	Pseudomonas_phage	5.2e-26	29.2
WP_000848829.1\|5194558_5194969_-	hypothetical protein	NA	NA	NA	NA
WP_000348967.1\|5194984_5195227_-	DNA polymerase III subunit gamma/tau	NA	NA	NA	NA
WP_077252115.1\|5195236_5195467_-	hypothetical protein	NA	NA	NA	NA
WP_000102649.1\|5195796_5196867_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_000203527.1\|5196863_5197769_-	chemotaxis protein	NA	NA	NA	NA
WP_000544707.1\|5197765_5200162_-	hypothetical protein	NA	NA	NA	NA
WP_001069798.1\|5200379_5201252_-	GTPase family protein	NA	NA	NA	NA
WP_000282124.1\|5201582_5201765_+	hypothetical protein	NA	NA	NA	NA
WP_001066419.1\|5202211_5203768_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.3e-161	56.2
WP_000631725.1\|5203787_5204135_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001341423.1\|5204131_5204806_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_087661054.1\|5204910_5206124_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_032210102.1\|5206175_5206505_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	3.2e-46	94.8
WP_032210101.1\|5206662_5207904_-	tellurium resistance protein TerF	NA	NA	NA	NA
WP_000301248.1\|5208332_5208908_-	TerD family protein	K4JRX3	Caulobacter_phage	2.5e-30	41.1
WP_000116680.1\|5208976_5209555_-	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	2.5e-06	40.0
WP_000255079.1\|5209603_5210644_-	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
WP_000007449.1\|5210666_5211122_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_001054789.1\|5211144_5212302_-	tellurium resistance protein TerA	NA	NA	NA	NA
WP_000254140.1\|5212301_5212883_-	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	1.7e-13	30.5
WP_001035166.1\|5213205_5214264_+	hypothetical protein	NA	NA	NA	NA
WP_001280118.1\|5214273_5215416_+	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	7.7e-31	35.4
WP_001040060.1\|5215408_5216182_+	hypothetical protein	NA	NA	NA	NA
WP_001182418.1\|5216183_5217263_+\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	6.2e-38	34.4
WP_000797372.1\|5217262_5218219_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_000506894.1\|5218229_5219438_+	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_001176766.1\|5219455_5219923_+	tellurium resistance protein TerW	NA	NA	NA	NA
WP_000042916.1\|5220183_5220513_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000957247.1\|5220499_5220880_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001370715.1\|5220922_5222464_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	3.9e-78	36.8
WP_001443493.1\|5223996_5224668_+	hypothetical protein	NA	NA	NA	NA
WP_001135714.1\|5225534_5225675_-	Hok/Gef family protein	G9L6L7	Escherichia_phage	3.1e-11	66.7
WP_000803992.1\|5225976_5226240_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000024297.1\|5228235_5228595_+	diacylglycerol kinase	NA	NA	NA	NA
WP_000591998.1\|5228687_5230307_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_000134819.1\|5230531_5230807_-	hypothetical protein	NA	NA	NA	NA
WP_085948186.1\|5230945_5232101_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1

DBSCAN-SWA_19

5240004 : 5269852

Stx2-converting_phage(42.86%)

tRNA,integrase,protease,transposase

attL 5232690:5232704|attR 5270451:5270465

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5232690:5232704	attL	NA	NA	NA	NA
WP_001034023.1\|5240004_5244096_+\|protease	serine protease autotransporter EspI	Q9LA58	Enterobacterial_phage	6.8e-311	44.6
WP_077633724.1\|5244549_5244798_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.3e-28	80.2
WP_001341423.1\|5244811_5245486_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_000631725.1\|5245482_5245830_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001066419.1\|5245849_5247406_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.3e-161	56.2
WP_000612591.1\|5247664_5248012_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_000997983.1\|5248061_5249600_+\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.9e-296	99.0
WP_000035067.1\|5249666_5249855_+	hypothetical protein	NA	NA	NA	NA
WP_087661054.1\|5250103_5251316_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_085948186.1\|5251927_5253084_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_050438101.1\|5254646_5255555_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.8e-68	45.1
WP_000088311.1\|5255500_5255803_-\|transposase	transposase	NA	NA	NA	NA
WP_000282106.1\|5256235_5256799_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_032209782.1\|5257811_5259245_-	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_000270113.1\|5259340_5259568_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000248065.1\|5260297_5261911_+	hypothetical protein	NA	NA	NA	NA
WP_000268401.1\|5262003_5262600_-	hypothetical protein	A0A1B0VBK8	Salmonella_phage	2.0e-99	89.4
WP_000290297.1\|5262729_5264046_-\|integrase	site-specific integrase	A0A248SL35	Klebsiella_phage	6.6e-34	28.8
WP_001065895.1\|5264342_5265107_-	NADPH-dependent ferric chelate reductase	NA	NA	NA	NA
WP_000018003.1\|5265383_5266007_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000094682.1\|5266160_5267681_-	aerotaxis sensor receptor Aer	A0A1B0V854	Salmonella_phage	1.4e-35	52.2
WP_000633393.1\|5267987_5269478_+	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	2.2e-33	28.6
WP_000450589.1\|5269519_5269852_-\|tRNA	tRNA-binding protein	NA	NA	NA	NA
5270451:5270465	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP027455

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

32567 : 40341

Escherichia_phage(28.57%)

integrase

attL 27794:27810|attR 45632:45648

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
27794:27810	attL	NA	NA	NA	NA
WP_021553177.1\|32567_33251_-	DNA methylase	A0A2I7RE86	Vibrio_phage	4.3e-29	37.4
WP_106901586.1\|33635_34538_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_000618111.1\|34955_35204_+	DinI-like family protein	Q2A098	Sodalis_phage	1.1e-14	49.3
WP_021553174.1\|35200_35638_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.9e-25	47.6
WP_000457496.1\|35637_36909_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	1.4e-142	60.5
WP_000340829.1\|36913_37306_-	hypothetical protein	NA	NA	NA	NA
WP_001103690.1\|37310_38282_-	hypothetical protein	A0A222YXF2	Escherichia_phage	7.4e-67	42.9
WP_000633913.1\|38510_39155_+	AAA family ATPase	A0A222YXS3	Escherichia_phage	1.9e-39	43.0
WP_000239529.1\|39148_39424_+	hypothetical protein	NA	NA	NA	NA
WP_001302707.1\|39561_40341_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.6e-54	96.4
45632:45648	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027454

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP027455

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection