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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP028333 Listeria monocytogenes strain CFSAN054108 chromosome, complete genome 3 crisprs DinG,csa3,WYL,cas3,DEDDh,casR 0 0 4 0

Results visualization

1. NZ_CP028333
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028333_1 138780-138934 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028333_2 2818466-2819050 Orphan NA
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028333_3 2820696-2820874 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 215650 : 301466 105 Listeria_phage(86.76%) holin,plate,capsid,integrase,tail,terminase,transposase attL 263089:263133|attR 300348:300392
DBSCAN-SWA_2 773940 : 781785 7 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 1506991 : 1515277 8 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 2009574 : 2068173 57 Streptococcus_phage(16.67%) tRNA,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage