CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019961	Escherichia coli strain HKUOPY1 chromosome, complete genome	9 crisprs	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4	0	16	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019961_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_1

170644-170788

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019961_1

>merge|NZ_CP019961|1|170644-170788|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>NZ_CP019961|1|1|170644-170788|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_000891692.1\|178963_180022_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP019961.1\|WP_001300666.1\|178144_178963_+\|pyridoxal-phosphatase	unknown	unknown	gnl\|CDD\|182523
NZ_CP019961.1\|WP_000246761.1\|164298_165054_-\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP019961.1\|WP_107316910.1\|170811_173073_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
NZ_CP019961.1\|WP_107316911.1\|173255_174689_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP019961.1\|WP_001091587.1\|169294_170578_+\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP019961.1\|WP_001408763.1\|158542_159532_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP019961.1\|WP_001295302.1\|159928_160837_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl\|CDD\|211689
NZ_CP019961.1\|WP_000118826.1\|165040_166195_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP019961.1\|WP_000679972.1\|176000_176954_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
NZ_CP019961.1\|WP_000723652.1\|174764_175817_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
NZ_CP019961.1\|WP_001400106.1\|163628_164306_-\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP019961.1\|WP_107316909.1\|167318_168608_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP019961.1\|WP_000101984.1\|180713_181487_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP019961.1\|WP_000042533.1\|161028_163050_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP019961.1\|WP_000891515.1\|181653_181803_-\|multidrug-efflux-pump-accessory-protein-AcrZ	unknown	unknown	gnl\|CDD\|371231
NZ_CP019961.1\|WP_000951213.1\|166191_167232_-\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP019961.1\|WP_107316912.1\|176994_177990_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
NZ_CP019961.1\|WP_000604034.1\|180024_180714_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP019961.1\|WP_000767389.1\|168666_169143_+\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_000891692.1\|178963_180022_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP019961.1\|WP_001300666.1\|178144_178963_+\|pyridoxal-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
NZ_CP019961.1\|WP_000246761.1\|164298_165054_-\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	7.9121e-172
NZ_CP019961.1\|WP_107316910.1\|170811_173073_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
NZ_CP019961.1\|WP_107316911.1\|173255_174689_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
NZ_CP019961.1\|WP_001091587.1\|169294_170578_+\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP019961.1\|WP_001408763.1\|158542_159532_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_CP019961.1\|WP_001295302.1\|159928_160837_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	2.22556e-139
NZ_CP019961.1\|WP_000118826.1\|165040_166195_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP019961.1\|WP_000679972.1\|176000_176954_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
NZ_CP019961.1\|WP_000723652.1\|174764_175817_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
NZ_CP019961.1\|WP_001400106.1\|163628_164306_-\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	1.9189e-110
NZ_CP019961.1\|WP_107316909.1\|167318_168608_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP019961.1\|WP_000101984.1\|180713_181487_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
NZ_CP019961.1\|WP_000042533.1\|161028_163050_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP019961.1\|WP_000891515.1\|181653_181803_-\|multidrug-efflux-pump-accessory-protein-AcrZ	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17
NZ_CP019961.1\|WP_000951213.1\|166191_167232_-\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP019961.1\|WP_107316912.1\|176994_177990_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
NZ_CP019961.1\|WP_000604034.1\|180024_180714_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
NZ_CP019961.1\|WP_000767389.1\|168666_169143_+\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.08182e-118

>NZ_CP019961.1|WP_001091587.1|169294_170578_+|putative-acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPEFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>NZ_CP019961.1|WP_000767389.1|168666_169143_+|kinase-inhibitor
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>NZ_CP019961.1|WP_107316909.1|167318_168608_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTTDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGNNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>NZ_CP019961.1|WP_000951213.1|166191_167232_-|biotin-synthase-BioB
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>NZ_CP019961.1|WP_000118826.1|165040_166195_-|8-amino-7-oxononanoate-synthase
MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>NZ_CP019961.1|WP_000246761.1|164298_165054_-|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>NZ_CP019961.1|WP_001400106.1|163628_164306_-|ATP-dependent-dethiobiotin-synthetase-BioD
MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQAIQHAGLTLAGWVANDVTPPGKRHAEYMITLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>NZ_CP019961.1|WP_000042533.1|161028_163050_-|excinuclease-ABC-subunit-B
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP019961.1|WP_001295302.1|159928_160837_+|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>NZ_CP019961.1|WP_001408763.1|158542_159532_-|GTP-3',8-cyclase-MoaA
MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDAQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG
>NZ_CP019961.1|WP_107316910.1|170811_173073_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIAQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>NZ_CP019961.1|WP_107316911.1|173255_174689_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATLSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTTMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>NZ_CP019961.1|WP_000723652.1|174764_175817_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>NZ_CP019961.1|WP_000679972.1|176000_176954_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>NZ_CP019961.1|WP_107316912.1|176994_177990_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHDNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>NZ_CP019961.1|WP_001300666.1|178144_178963_+|pyridoxal-phosphatase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>NZ_CP019961.1|WP_000891692.1|178963_180022_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>NZ_CP019961.1|WP_000604034.1|180024_180714_-|molybdate-ABC-transporter-permease-subunit
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>NZ_CP019961.1|WP_000101984.1|180713_181487_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK
>NZ_CP019961.1|WP_000891515.1|181653_181803_-|multidrug-efflux-pump-accessory-protein-AcrZ
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019961_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_2

761416-761512

Orphan

Consensus_repeat	Method
GCCAGCGTCGCATCAGGCATCCGCGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019961_2

>merge|NZ_CP019961|2|761416-761512|CRISPRCasFinder
GCCAGCGTCGCATCAGGCATCCGCGCACAATTGCCGGATGCGGCACAAGTTTGTAGGCACGATAAGACGCGCCAGCGTCGCATCAGGCATCTGCGCA

>NZ_CP019961|2|2|761416-761512|CRISPRCasFinder
GCCAGCGTCGCATCAGGCATCCGCGCA	CAATTGCCGGATGCGGCACAAGTTTGTAGGCACGATAAGACGC
GCCAGCGTCGCATCAGGCATCTGCGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_001321003.1\|755996_756263_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181972
NZ_CP019961.1\|WP_001293003.1\|754013_755471_+\|cytosol-nonspecific-dipeptidase	unknown	unknown	gnl\|CDD\|184986
NZ_CP019961.1\|WP_001325255.1\|759560_761300_+\|flagellar-type-III-secretion-system-protein-FlhA	unknown	unknown	gnl\|CDD\|224217
NZ_CP019961.1\|WP_001226164.1\|757704_758760_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP019961.1\|WP_001263493.1\|756958_757357_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafO	unknown	unknown	gnl\|CDD\|236631
NZ_CP019961.1\|WP_000284050.1\|765528_766107_-\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
NZ_CP019961.1\|WP_001329160.1\|755527_756064_-\|peptide-chain-release-factor-H	unknown	unknown	gnl\|CDD\|181271
NZ_CP019961.1\|WP_000532698.1\|768833_769307_-\|C-lysozyme-inhibitor	unknown	unknown	gnl\|CDD\|182187
NZ_CP019961.1\|WP_107316938.1\|769460_770231_+\|2-oxoglutaramate-amidase	unknown	unknown	gnl\|CDD\|182461
NZ_CP019961.1\|WP_000729704.1\|763147_763408_+\|type-II-toxin-antitoxin-system-antitoxin-DinJ	unknown	unknown	gnl\|CDD\|225619
NZ_CP019961.1\|WP_000615979.1\|763410_763689_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ	unknown	unknown	gnl\|CDD\|225583
NZ_CP019961.1\|WP_001291990.1\|753294_753753_-\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
NZ_CP019961.1\|WP_000554757.1\|757359_757653_-\|type-I-toxin-antitoxin-system-antitoxin-YafN	unknown	unknown	gnl\|CDD\|170091
NZ_CP019961.1\|WP_000973083.1\|766346_768791_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236528
NZ_CP019961.1\|WP_000333379.1\|764555_765323_-\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
NZ_CP019961.1\|WP_001353765.1\|762188_762962_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP019961.1\|WP_000006261.1\|761515_762013_-\|REP-associated-tyrosine-transposase-RayT	unknown	unknown	gnl\|CDD\|224854
NZ_CP019961.1\|WP_107316937.1\|756496_756949_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182099
NZ_CP019961.1\|WP_001301266.1\|758830_759601_-\|putative-lateral-flagellar-export/assembly-protein-LafU	unknown	unknown	gnl\|CDD\|235860
NZ_CP019961.1\|WP_001225679.1\|763844_764585_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_001321003.1\|755996_756263_-\|hypothetical-protein	gnl\|CDD\|181972	PRK09588, PRK09588, hypothetical protein; Reviewed.	1.93527e-42
NZ_CP019961.1\|WP_001293003.1\|754013_755471_+\|cytosol-nonspecific-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0
NZ_CP019961.1\|WP_001325255.1\|759560_761300_+\|flagellar-type-III-secretion-system-protein-FlhA	gnl\|CDD\|224217	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP019961.1\|WP_001226164.1\|757704_758760_-\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP019961.1\|WP_001263493.1\|756958_757357_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafO	gnl\|CDD\|236631	PRK09885, PRK09885, type II toxin-antitoxin system YafO family toxin.	4.34988e-75
NZ_CP019961.1\|WP_000284050.1\|765528_766107_-\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	1.61173e-142
NZ_CP019961.1\|WP_001329160.1\|755527_756064_-\|peptide-chain-release-factor-H	gnl\|CDD\|181271	PRK08179, prfH, peptide chain release factor-like protein; Reviewed.	1.55688e-111
NZ_CP019961.1\|WP_000532698.1\|768833_769307_-\|C-lysozyme-inhibitor	gnl\|CDD\|182187	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional.	9.39999e-93
NZ_CP019961.1\|WP_107316938.1\|769460_770231_+\|2-oxoglutaramate-amidase	gnl\|CDD\|182461	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional.	0
NZ_CP019961.1\|WP_000729704.1\|763147_763408_+\|type-II-toxin-antitoxin-system-antitoxin-DinJ	gnl\|CDD\|225619	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair].	4.04445e-29
NZ_CP019961.1\|WP_000615979.1\|763410_763689_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ	gnl\|CDD\|225583	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown].	8.29074e-42
NZ_CP019961.1\|WP_001291990.1\|753294_753753_-\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	4.12435e-113
NZ_CP019961.1\|WP_000554757.1\|757359_757653_-\|type-I-toxin-antitoxin-system-antitoxin-YafN	gnl\|CDD\|170091	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN.	1.06302e-51
NZ_CP019961.1\|WP_000973083.1\|766346_768791_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|236528	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed.	0
NZ_CP019961.1\|WP_000333379.1\|764555_765323_-\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	1.1374e-145
NZ_CP019961.1\|WP_001353765.1\|762188_762962_-\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.91548e-41
NZ_CP019961.1\|WP_000006261.1\|761515_762013_-\|REP-associated-tyrosine-transposase-RayT	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.09955e-43
NZ_CP019961.1\|WP_107316937.1\|756496_756949_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182099	PRK09831, PRK09831, GNAT family N-acetyltransferase.	3.44381e-104
NZ_CP019961.1\|WP_001301266.1\|758830_759601_-\|putative-lateral-flagellar-export/assembly-protein-LafU	gnl\|CDD\|235860	PRK06778, PRK06778, hypothetical protein; Validated.	5.93806e-171
NZ_CP019961.1\|WP_001225679.1\|763844_764585_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.07529e-116

>NZ_CP019961.1|WP_001325255.1|759560_761300_+|flagellar-type-III-secretion-system-protein-FlhA
MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLASMAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM
>NZ_CP019961.1|WP_001301266.1|758830_759601_-|putative-lateral-flagellar-export/assembly-protein-LafU
MIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR
>NZ_CP019961.1|WP_001226164.1|757704_758760_-|DNA-polymerase-IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
>NZ_CP019961.1|WP_000554757.1|757359_757653_-|type-I-toxin-antitoxin-system-antitoxin-YafN
MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEKYLNDMTDDDFNDFKE
>NZ_CP019961.1|WP_001263493.1|756958_757357_-|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafO
MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANVNNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKQARDNNQMHKIGKMAEAFRMRF
>NZ_CP019961.1|WP_107316937.1|756496_756949_-|GNAT-family-N-acetyltransferase
MNNIQIRDYQPGDFQQLCAIFIRAVTMISSQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCVERYIDMLFVDPEYTRRGVACALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGTWLTNFYMRYKPQY
>NZ_CP019961.1|WP_001321003.1|755996_756263_-|hypothetical-protein
MEWYMGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPTRRRCNGAGNRNGPLL
>NZ_CP019961.1|WP_001329160.1|755527_756064_-|peptide-chain-release-factor-H
MVVFTRQDVAVTVLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADEKEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAFIEG
>NZ_CP019961.1|WP_001293003.1|754013_755471_+|cytosol-nonspecific-dipeptidase
MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWLQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQDILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIKSVGHYWTLLTELLKEIPAK
>NZ_CP019961.1|WP_001291990.1|753294_753753_-|xanthine-phosphoribosyltransferase
MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR
>NZ_CP019961.1|WP_000006261.1|761515_762013_-|REP-associated-tyrosine-transposase-RayT
MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRNAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHTIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVERGLYPIDWAGDVTDINAGERIIL
>NZ_CP019961.1|WP_001353765.1|762188_762962_-|C40-family-peptidase
MHDQPLLRMSLPSIPSFVLSGLLLLCLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALVENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRVSRLAEPFWQDHFLGARRILTEETIL
>NZ_CP019961.1|WP_000729704.1|763147_763408_+|type-II-toxin-antitoxin-system-antitoxin-DinJ
MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGVDVHKAKDADDLFDKLGI
>NZ_CP019961.1|WP_000615979.1|763410_763689_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ
MIQRDIEYSGQFSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG
>NZ_CP019961.1|WP_001225679.1|763844_764585_+|murein-L,D-transpeptidase
MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNYTLPEAK
>NZ_CP019961.1|WP_000333379.1|764555_765323_-|class-II-glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRAKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV
>NZ_CP019961.1|WP_000284050.1|765528_766107_-|D-sedoheptulose-7-phosphate-isomerase
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
>NZ_CP019961.1|WP_000973083.1|766346_768791_+|acyl-CoA-dehydrogenase
MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAEESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA
>NZ_CP019961.1|WP_000532698.1|768833_769307_-|C-lysozyme-inhibitor
MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK
>NZ_CP019961.1|WP_107316938.1|769460_770231_+|2-oxoglutaramate-amidase
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPALRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019961_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_3

984429-984570

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019961_3

>merge|NZ_CP019961|3|984429-984570|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>NZ_CP019961|3|3|984429-984570|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_000543586.1\|990099_990921_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP019961.1\|WP_000004655.1\|993019_993469_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
NZ_CP019961.1\|WP_000597260.1\|988495_989644_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP019961.1\|WP_000347117.1\|978785_979928_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP019961.1\|WP_001287715.1\|973704_974991_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP019961.1\|WP_000349936.1\|980056_981274_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP019961.1\|WP_000333125.1\|984599_984995_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_CP019961.1\|WP_089623874.1\|977240_978755_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568
NZ_CP019961.1\|WP_089623873.1\|975997_976768_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
NZ_CP019961.1\|WP_001286873.1\|994087_996904_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NZ_CP019961.1\|WP_000767337.1\|996946_997888_-\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP019961.1\|WP_000083375.1\|993593_994088_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
NZ_CP019961.1\|WP_000203741.1\|973420_973708_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP019961.1\|WP_001126376.1\|985256_988478_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP019961.1\|WP_001239155.1\|991087_992002_-\|ribonucleoside-hydrolase-RihC	unknown	unknown	gnl\|CDD\|182713
NZ_CP019961.1\|WP_001166395.1\|992067_993018_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP019961.1\|WP_000122886.1\|983800_984391_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP019961.1\|WP_001295419.1\|983009_983795_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_CP019961.1\|WP_089623875.1\|981347_982901_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP019961.1\|WP_001091528.1\|975041_975983_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_000543586.1\|990099_990921_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	2.21003e-141
NZ_CP019961.1\|WP_000004655.1\|993019_993469_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	9.11961e-106
NZ_CP019961.1\|WP_000597260.1\|988495_989644_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP019961.1\|WP_000347117.1\|978785_979928_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP019961.1\|WP_001287715.1\|973704_974991_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP019961.1\|WP_000349936.1\|980056_981274_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP019961.1\|WP_000333125.1\|984599_984995_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
NZ_CP019961.1\|WP_089623874.1\|977240_978755_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_CP019961.1\|WP_089623873.1\|975997_976768_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	7.05728e-170
NZ_CP019961.1\|WP_001286873.1\|994087_996904_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP019961.1\|WP_000767337.1\|996946_997888_-\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	3.93114e-173
NZ_CP019961.1\|WP_000083375.1\|993593_994088_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	1.21824e-75
NZ_CP019961.1\|WP_000203741.1\|973420_973708_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
NZ_CP019961.1\|WP_001126376.1\|985256_988478_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP019961.1\|WP_001239155.1\|991087_992002_-\|ribonucleoside-hydrolase-RihC	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
NZ_CP019961.1\|WP_001166395.1\|992067_993018_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP019961.1\|WP_000122886.1\|983800_984391_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	6.23334e-142
NZ_CP019961.1\|WP_001295419.1\|983009_983795_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	5.82869e-179
NZ_CP019961.1\|WP_089623875.1\|981347_982901_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP019961.1\|WP_001091528.1\|975041_975983_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0

>NZ_CP019961.1|WP_000122886.1|983800_984391_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRYHASLHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_CP019961.1|WP_001295419.1|983009_983795_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP019961.1|WP_089623875.1|981347_982901_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLCEESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP019961.1|WP_000349936.1|980056_981274_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP019961.1|WP_000347117.1|978785_979928_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP019961.1|WP_089623874.1|977240_978755_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRNYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDTKQNWKD
>NZ_CP019961.1|WP_089623873.1|975997_976768_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAQAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_CP019961.1|WP_001091528.1|975041_975983_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGVQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP019961.1|WP_001287715.1|973704_974991_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP019961.1|WP_000203741.1|973420_973708_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP019961.1|WP_000333125.1|984599_984995_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP019961.1|WP_001126376.1|985256_988478_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_CP019961.1|WP_000597260.1|988495_989644_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP019961.1|WP_000543586.1|990099_990921_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAIKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL
>NZ_CP019961.1|WP_001239155.1|991087_992002_-|ribonucleoside-hydrolase-RihC
MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGKSGMAGYDFVEHNRKPLEVPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPHIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLNVKGFQQWVADLLALVP
>NZ_CP019961.1|WP_001166395.1|992067_993018_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>NZ_CP019961.1|WP_000004655.1|993019_993469_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>NZ_CP019961.1|WP_000083375.1|993593_994088_-|lipoprotein-signal-peptidase
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGGWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ
>NZ_CP019961.1|WP_001286873.1|994087_996904_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVNGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA
>NZ_CP019961.1|WP_000767337.1|996946_997888_-|bifunctional-riboflavin-kinase/FAD-synthetase
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA

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Crispr_ID: NZ_CP019961_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_4

2772743-2773442

Unclear

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

11 spacers

The CRISPR arrays of NZ_CP019961_4

>merge|NZ_CP019961|4|2772743-2773442|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAGCACAAATATCATCGCTCAAACCACTTACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCCAGCGGGGATAAACCGACCTGAACGAAACGCAAAATAGTTTCTTTATGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCACCAGCGATAGAGCCGCAAACAGAGCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCCCTTTTTCAGATCCAATGCTGCAGGCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCGCGCGGCGGGTGAGTCCGTGTTTTATACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATGACTATAAAAGCTTATATTTTGATAAATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTCTCGAGCGCCGGACGATTCAAAACCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCCAGGTCCTCGTCAGATACAGTAGTCACAACACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCACTGACAGTGAAGCTGAATTACAGGCAGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP019961|4|1|2772743-2773381|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCACAAATATCATCGCTCAAACCACTTACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCAGGGAACGATTGTTGACACTGTAAAA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	ACCTGAACGAAACGCAAAATAGTTTCTTTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCACCAGCGATAGAGCCGCAAACAGAGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCCCTTTTTCAGATCCAATGCTGCAGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGCGCGGCGGGTGAGTCCGTGTTTTATAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATGACTATAAAAGCTTATATTTTGATAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTCTCGAGCGCCGGACGATTCAAAACCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGGTCCTCGTCAGATACAGTAGTCACAACACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACTGACAGTGAAGCTGAATTACAGGCAGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP019961|4|4|2772743-2773442|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCACAAATATCATCGCTCAAACCACTTACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCAGGGAACGATTGTTGACACTGTAAAA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	ACCTGAACGAAACGCAAAATAGTTTCTTTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCACCAGCGATAGAGCCGCAAACAGAGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCCCTTTTTCAGATCCAATGCTGCAGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGCGCGGCGGGTGAGTCCGTGTTTTATAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATGACTATAAAAGCTTATATTTTGATAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTCTCGAGCGCCGGACGATTCAAAACCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGGTCCTCGTCAGATACAGTAGTCACAACACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACTGACAGTGAAGCTGAATTACAGGCAGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP019961|4|1|2772743-2773442|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCACAAATATCATCGCTCAAACCACTTACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCAGGGAACGATTGTTGACACTGTAAAA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	ACCTGAACGAAACGCAAAATAGTTTCTTTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCACCAGCGATAGAGCCGCAAACAGAGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCCCTTTTTCAGATCCAATGCTGCAGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGCGCGGCGGGTGAGTCCGTGTTTTATAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATGACTATAAAAGCTTATATTTTGATAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTCTCGAGCGCCGGACGATTCAAAACCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGGTCCTCGTCAGATACAGTAGTCACAACACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACTGACAGTGAAGCTGAATTACAGGCAGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_000109526.1\|2783275_2783536_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP019961.1\|WP_000059307.1\|2778036_2779491_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP019961.1\|WP_000021321.1\|2777181_2777967_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP019961.1\|WP_001130266.1\|2782683_2783259_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP019961.1\|WP_001164544.1\|2775585_2776863_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP019961.1\|WP_000254738.1\|2766058_2766394_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP019961.1\|WP_001299652.1\|2780899_2781679_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP019961.1\|WP_001400925.1\|2766464_2767256_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP019961.1\|WP_001299097.1\|2781675_2782536_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP019961.1\|WP_000210878.1\|2767483_2769121_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP019961.1\|WP_000039688.1\|2774080_2775559_-\|kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP019961.1\|WP_000389121.1\|2783526_2784798_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP019961.1\|WP_001098105.1\|2779584_2780922_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP019961.1\|WP_001720463.1\|2770566_2771439_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP019961.1\|WP_000226815.1\|2763498_2765733_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP019961.1\|WP_001288228.1\|2771452_2771593_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019961.1\|WP_001199973.1\|2771731_2772403_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP019961.1\|WP_000046812.1\|2762149_2763451_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP019961.1\|WP_000581937.1\|2765810_2766059_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP019961.1\|WP_000036723.1\|2769208_2770507_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_000109526.1\|2783275_2783536_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
NZ_CP019961.1\|WP_000059307.1\|2778036_2779491_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.73778e-83
NZ_CP019961.1\|WP_000021321.1\|2777181_2777967_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP019961.1\|WP_001130266.1\|2782683_2783259_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP019961.1\|WP_000046812.1\|2762149_2763451_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP019961.1\|WP_000254738.1\|2766058_2766394_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP019961.1\|WP_001299652.1\|2780899_2781679_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP019961.1\|WP_001400925.1\|2766464_2767256_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.22239e-159
NZ_CP019961.1\|WP_001299097.1\|2781675_2782536_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP019961.1\|WP_000210878.1\|2767483_2769121_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP019961.1\|WP_000039688.1\|2774080_2775559_-\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
NZ_CP019961.1\|WP_000389121.1\|2783526_2784798_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.16926e-127
NZ_CP019961.1\|WP_001098105.1\|2779584_2780922_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
NZ_CP019961.1\|WP_001720463.1\|2770566_2771439_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.06666e-99
NZ_CP019961.1\|WP_000226815.1\|2763498_2765733_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP019961.1\|WP_001199973.1\|2771731_2772403_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP019961.1\|WP_001164544.1\|2775585_2776863_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.60446e-29
NZ_CP019961.1\|WP_000581937.1\|2765810_2766059_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP019961.1\|WP_000036723.1\|2769208_2770507_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0

>NZ_CP019961.1|WP_001199973.1|2771731_2772403_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP019961.1|WP_001288228.1|2771452_2771593_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_CP019961.1|WP_001720463.1|2770566_2771439_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQITVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP019961.1|WP_000036723.1|2769208_2770507_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP019961.1|WP_000210878.1|2767483_2769121_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP019961.1|WP_001400925.1|2766464_2767256_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEEAYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP019961.1|WP_000254738.1|2766058_2766394_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP019961.1|WP_000581937.1|2765810_2766059_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP019961.1|WP_000226815.1|2763498_2765733_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP019961.1|WP_000046812.1|2762149_2763451_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP019961.1|WP_000039688.1|2774080_2775559_-|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP019961.1|WP_001164544.1|2775585_2776863_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP019961.1|WP_000021321.1|2777181_2777967_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP019961.1|WP_000059307.1|2778036_2779491_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP019961.1|WP_001098105.1|2779584_2780922_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP019961.1|WP_001299652.1|2780899_2781679_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP019961.1|WP_001299097.1|2781675_2782536_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP019961.1|WP_001130266.1|2782683_2783259_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP019961.1|WP_000109526.1|2783275_2783536_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP019961.1|WP_000389121.1|2783526_2784798_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL

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Crispr_ID: NZ_CP019961_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_5

2798992-2799569

TypeI-E

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

9 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP019961_5

>merge|NZ_CP019961|5|2798992-2799569|CRISPRCasFinder,CRT,PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCGGCCGGGTTAAGAAGGTGTATGGATGGCCCGGAGAGTTCCCCGCGCCAGCGGGGATAAACCGCGTCCGCGGCTGCAACTGATGCCGGGGCTTATGAGTTCCCCGCGCCAGCGGGGATAAACCGAACCTTGTCGGGTCGCCCGTGCGTCATGATGAGAGTTCCCCGCGCCAGCGGGGATAAACCGAGTTCCCACAAACCTGGGTGCATCTCGCGTTCGAGTTCCCCGCGCCAGCGGGGATAAACCGACTGCAAAGTTCTTCACGCTGGTTTTTATGCAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCGAAACAACGCCAGCAAAATCGACCGCGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGGACAGGCCGTGACGGTTGCCATTGAGTCGAGTTCCCCGCGCCAGCGGGGATAAACCGTTTTTGTTCTCTTCAAAACGCCGAACAACCAAGAGTTCCCCGCGTCAGCGAGGATAAACCGGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_CP019961|5|5|2798992-2799569|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGGGTTAAGAAGGTGTATGGATGGCCCGGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_CP019961|5|2|2798992-2799569|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGGGTTAAGAAGGTGTATGGATGGCCCGGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_CP019961|5|2|2799236-2799447|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_000568946.1\|2805903_2806953_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP019961.1\|WP_089623943.1\|2787355_2789068_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP019961.1\|WP_000039850.1\|2789142_2789877_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019961.1\|WP_000220067.1\|2797682_2798600_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP019961.1\|WP_001416755.1\|2798601_2798886_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP019961.1\|WP_001295182.1\|2806933_2807695_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP019961.1\|WP_001090386.1\|2801788_2803216_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP019961.1\|WP_000490430.1\|2799589_2800627_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP019961.1\|WP_000281399.1\|2797067_2797667_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP019961.1\|WP_001258269.1\|2796406_2797081_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP019961.1\|WP_000064446.1\|2795312_2796404_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP019961.1\|WP_000372108.1\|2800878_2801787_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP019961.1\|WP_001050404.1\|2793316_2794825_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP019961.1\|WP_001246104.1\|2803870_2804194_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP019961.1\|WP_001219242.1\|2805427_2805907_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP019961.1\|WP_000752797.1\|2794817_2795300_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP019961.1\|WP_089623944.1\|2790235_2792902_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP019961.1\|WP_001173676.1\|2803215_2803821_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP019961.1\|WP_000246138.1\|2804717_2805428_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP019961.1\|WP_000517476.1\|2804387_2804699_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_000568946.1\|2805903_2806953_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP019961.1\|WP_089623943.1\|2787355_2789068_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP019961.1\|WP_000039850.1\|2789142_2789877_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.39575e-137
NZ_CP019961.1\|WP_000220067.1\|2797682_2798600_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.34057e-159
NZ_CP019961.1\|WP_001416755.1\|2798601_2798886_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.46262e-62
NZ_CP019961.1\|WP_001295182.1\|2806933_2807695_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP019961.1\|WP_001090386.1\|2801788_2803216_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP019961.1\|WP_000490430.1\|2799589_2800627_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP019961.1\|WP_000281399.1\|2797067_2797667_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.3792e-101
NZ_CP019961.1\|WP_001258269.1\|2796406_2797081_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	6.70134e-100
NZ_CP019961.1\|WP_000064446.1\|2795312_2796404_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	3.0298e-151
NZ_CP019961.1\|WP_000372108.1\|2800878_2801787_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP019961.1\|WP_001050404.1\|2793316_2794825_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP019961.1\|WP_001246104.1\|2803870_2804194_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP019961.1\|WP_001219242.1\|2805427_2805907_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP019961.1\|WP_000752797.1\|2794817_2795300_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.83779e-33
NZ_CP019961.1\|WP_089623944.1\|2790235_2792902_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP019961.1\|WP_001173676.1\|2803215_2803821_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.20197e-146
NZ_CP019961.1\|WP_000246138.1\|2804717_2805428_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP019961.1\|WP_000517476.1\|2804387_2804699_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62

>NZ_CP019961.1|WP_001416755.1|2798601_2798886_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>NZ_CP019961.1|WP_000220067.1|2797682_2798600_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_CP019961.1|WP_000281399.1|2797067_2797667_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVITINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>NZ_CP019961.1|WP_001258269.1|2796406_2797081_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGDIYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ
>NZ_CP019961.1|WP_000064446.1|2795312_2796404_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLSERFDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKANDGFLQPSLQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNNGEA
>NZ_CP019961.1|WP_000752797.1|2794817_2795300_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLAHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>NZ_CP019961.1|WP_001050404.1|2793316_2794825_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIDPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWVKPVKPNESVPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>NZ_CP019961.1|WP_089623944.1|2790235_2792902_+|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWVKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISDFGKNGERNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVIKGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSYEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNQDGWFWQGNSIVITYTRDEGMTRVIPANPK
>NZ_CP019961.1|WP_000039850.1|2789142_2789877_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP019961.1|WP_089623943.1|2787355_2789068_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVMTTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_CP019961.1|WP_000490430.1|2799589_2800627_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP019961.1|WP_000372108.1|2800878_2801787_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP019961.1|WP_001090386.1|2801788_2803216_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP019961.1|WP_001173676.1|2803215_2803821_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP019961.1|WP_001246104.1|2803870_2804194_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP019961.1|WP_000517476.1|2804387_2804699_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP019961.1|WP_000246138.1|2804717_2805428_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP019961.1|WP_001219242.1|2805427_2805907_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP019961.1|WP_000568946.1|2805903_2806953_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLNDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP019961.1|WP_001295182.1|2806933_2807695_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: NZ_CP019961_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_6

3331832-3331949

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019961_6

>merge|NZ_CP019961|6|3331832-3331949|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>NZ_CP019961|6|6|3331832-3331949|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_001075164.1\|3331968_3334254_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP019961.1\|WP_000140568.1\|3321312_3322215_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP019961.1\|WP_122992201.1\|3344926_3349321_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP019961.1\|WP_001281254.1\|3339698_3342326_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP019961.1\|WP_001209902.1\|3323594_3324854_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP019961.1\|WP_000332036.1\|3330604_3331735_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP019961.1\|WP_000779102.1\|3328107_3329184_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP019961.1\|WP_000948732.1\|3326744_3328103_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP019961.1\|WP_000990753.1\|3338829_3339552_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP019961.1\|WP_089623797.1\|3342474_3344163_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP019961.1\|WP_089623796.1\|3350975_3351752_+\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP019961.1\|WP_001104549.1\|3349321_3350971_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP019961.1\|WP_000580275.1\|3353040_3354363_-\|TIGR00366-family-protein	unknown	unknown	gnl\|CDD\|280776
NZ_CP019961.1\|WP_107316996.1\|3324843_3326472_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP019961.1\|WP_077492556.1\|3344159_3344783_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP019961.1\|WP_000992954.1\|3320468_3321272_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	unknown	unknown	gnl\|CDD\|182257
NZ_CP019961.1\|WP_000786547.1\|3351825_3353010_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP019961.1\|WP_001000359.1\|3322407_3323598_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP019961.1\|WP_000301050.1\|3329646_3330297_+\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP019961.1\|WP_000135040.1\|3330350_3330605_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_001075164.1\|3331968_3334254_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP019961.1\|WP_000140568.1\|3321312_3322215_-\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP019961.1\|WP_122992201.1\|3344926_3349321_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP019961.1\|WP_001281254.1\|3339698_3342326_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP019961.1\|WP_001209902.1\|3323594_3324854_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP019961.1\|WP_000332036.1\|3330604_3331735_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP019961.1\|WP_000779102.1\|3328107_3329184_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP019961.1\|WP_000948732.1\|3326744_3328103_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP019961.1\|WP_000990753.1\|3338829_3339552_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171
NZ_CP019961.1\|WP_089623797.1\|3342474_3344163_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP019961.1\|WP_089623796.1\|3350975_3351752_+\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	1.50526e-152
NZ_CP019961.1\|WP_001104549.1\|3349321_3350971_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.75964e-127
NZ_CP019961.1\|WP_000580275.1\|3353040_3354363_-\|TIGR00366-family-protein	gnl\|CDD\|280776	pfam02667, SCFA_trans, Short chain fatty acid transporter. This family consists of two sequences annotated as short chain fatty acid transporters, however, there are no references giving details of experimental characterization of this function.	0
NZ_CP019961.1\|WP_107316996.1\|3324843_3326472_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP019961.1\|WP_077492556.1\|3344159_3344783_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	3.13004e-140
NZ_CP019961.1\|WP_000992954.1\|3320468_3321272_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	0
NZ_CP019961.1\|WP_000786547.1\|3351825_3353010_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP019961.1\|WP_001000359.1\|3322407_3323598_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP019961.1\|WP_000301050.1\|3329646_3330297_+\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
NZ_CP019961.1\|WP_000135040.1\|3330350_3330605_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53

>NZ_CP019961.1|WP_000332036.1|3330604_3331735_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NZ_CP019961.1|WP_000135040.1|3330350_3330605_-|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP019961.1|WP_000301050.1|3329646_3330297_+|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP019961.1|WP_000779102.1|3328107_3329184_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP019961.1|WP_000948732.1|3326744_3328103_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP019961.1|WP_107316996.1|3324843_3326472_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIACHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRTYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP019961.1|WP_001209902.1|3323594_3324854_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP019961.1|WP_001000359.1|3322407_3323598_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP019961.1|WP_000140568.1|3321312_3322215_-|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH
>NZ_CP019961.1|WP_000992954.1|3320468_3321272_+|2-keto-3-deoxy-L-rhamnonate-aldolase
MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY
>NZ_CP019961.1|WP_001075164.1|3331968_3334254_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP019961.1|WP_000990753.1|3338829_3339552_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP019961.1|WP_001281254.1|3339698_3342326_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGEGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP019961.1|WP_089623797.1|3342474_3344163_+|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLITIPFLHDVLSEDFVFYYQNHADRLGIEGRIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVHFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP019961.1|WP_077492556.1|3344159_3344783_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVVHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP019961.1|WP_122992201.1|3344926_3349321_+|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVTLNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMLPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_CP019961.1|WP_001104549.1|3349321_3350971_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP019961.1|WP_089623796.1|3350975_3351752_+|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADEQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP019961.1|WP_000786547.1|3351825_3353010_-|acetyl-CoA-C-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NZ_CP019961.1|WP_000580275.1|3353040_3354363_-|TIGR00366-family-protein
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF

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Crispr_ID: NZ_CP019961_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_7

3553509-3553649

Orphan

Consensus_repeat	Method
ACCTACGGTTCGGATTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019961_7

>merge|NZ_CP019961|7|3553509-3553649|CRISPRCasFinder
ACCTACGGTTCGGATTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCGCTGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGGTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGC

>NZ_CP019961|7|7|3553509-3553649|CRISPRCasFinder
ACCTACGGTTCGGATTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGC	GCTGGCTGTCGGATGCGGCGTGAACGCCTTATCCG
ACCTACGGTTCGGGTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_001153547.1\|3547654_3548203_+\|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl\|CDD\|188523
NZ_CP019961.1\|WP_000479836.1\|3550320_3550800_+\|GDP-mannose-mannosyl-hydrolase	unknown	unknown	gnl\|CDD\|237966
NZ_CP019961.1\|WP_000079285.1\|3552022_3553459_+\|mannose-1-phosphate-guanyltransferase	unknown	unknown	gnl\|CDD\|185357
NZ_CP019961.1\|WP_000770796.1\|3558410_3559691_+\|colanic-acid-biosynthesis-pyruvyl-transferase-WcaK	unknown	unknown	gnl\|CDD\|188521
NZ_CP019961.1\|WP_000927089.1\|3546892_3547639_+\|colanic-acid-biosynthesis-glycosyltransferase-WcaE	unknown	unknown	gnl\|CDD\|182218
NZ_CP019961.1\|WP_000183130.1\|3555164_3556559_+\|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl\|CDD\|182254
NZ_CP019961.1\|WP_001515522.1\|3565794_3566673_+\|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl\|CDD\|185377
NZ_CP019961.1\|WP_001515525.1\|3560918_3562313_+\|colanic-acid-biosynthesis-protein-WcaM	unknown	unknown	gnl\|CDD\|182253
NZ_CP019961.1\|WP_000107816.1\|3545664_3546882_+\|putative-colanic-acid-polymerase-WcaD	unknown	unknown	gnl\|CDD\|188525
NZ_CP019961.1\|WP_000043654.1\|3549352_3550318_+\|GDP-L-fucose-synthase	unknown	unknown	gnl\|CDD\|187550
NZ_CP019961.1\|WP_001439135.1\|3553739_3555110_+\|phosphomannomutase-CpsG	unknown	unknown	gnl\|CDD\|185312
NZ_CP019961.1\|WP_001023912.1\|3544472_3545690_+\|colanic-acid-biosynthesis-glycosyltransferase-WcaC	unknown	unknown	gnl\|CDD\|274919
NZ_CP019961.1\|WP_001515526.1\|3559687_3560908_+\|colanic-acid-biosynthesis-glycosyltransferase-WcaL	unknown	unknown	gnl\|CDD\|188520
NZ_CP019961.1\|WP_000048190.1\|3548228_3549350_+\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
NZ_CP019961.1\|WP_000183060.1\|3562487_3563381_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalF	unknown	unknown	gnl\|CDD\|182252
NZ_CP019961.1\|WP_000699759.1\|3550796_3552020_+\|colanic-acid-biosynthesis-fucosyltransferase-WcaI	unknown	unknown	gnl\|CDD\|188522
NZ_CP019961.1\|WP_000058514.1\|3556560_3558039_+\|M-antigen-undecaprenyl-disphosphate-flippase	unknown	unknown	gnl\|CDD\|236697
NZ_CP019961.1\|WP_000888740.1\|3543987_3544476_+\|colanic-acid-biosynthesis-acetyltransferase-WcaB	unknown	unknown	gnl\|CDD\|182295
NZ_CP019961.1\|WP_001515524.1\|3563752_3564838_+\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|236649
NZ_CP019961.1\|WP_001515523.1\|3564837_3565737_+\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|182184

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_001153547.1\|3547654_3548203_+\|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl\|CDD\|188523	TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF. This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. This acetyltransferase is believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit).	7.2871e-132
NZ_CP019961.1\|WP_000479836.1\|3550320_3550800_+\|GDP-mannose-mannosyl-hydrolase	gnl\|CDD\|237966	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase.	1.30195e-118
NZ_CP019961.1\|WP_000079285.1\|3552022_3553459_+\|mannose-1-phosphate-guanyltransferase	gnl\|CDD\|185357	PRK15460, cpsB, mannose-1-phosphate guanyltransferase; Provisional.	0
NZ_CP019961.1\|WP_000770796.1\|3558410_3559691_+\|colanic-acid-biosynthesis-pyruvyl-transferase-WcaK	gnl\|CDD\|188521	TIGR04006, wcaK, colanic acid biosynthesis pyruvyl transferase WcaK. This gene is the pyruvyl transferase involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.	0
NZ_CP019961.1\|WP_000927089.1\|3546892_3547639_+\|colanic-acid-biosynthesis-glycosyltransferase-WcaE	gnl\|CDD\|182218	PRK10063, PRK10063, colanic acid biosynthesis glycosyltransferase WcaE.	4.86723e-180
NZ_CP019961.1\|WP_000183130.1\|3555164_3556559_+\|undecaprenyl-phosphate-glucose-phosphotransferase	gnl\|CDD\|182254	PRK10124, PRK10124, putative UDP-glucose lipid carrier transferase; Provisional.	0
NZ_CP019961.1\|WP_001515522.1\|3565794_3566673_+\|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl\|CDD\|185377	PRK15480, PRK15480, glucose-1-phosphate thymidylyltransferase RfbA; Provisional.	0
NZ_CP019961.1\|WP_001515525.1\|3560918_3562313_+\|colanic-acid-biosynthesis-protein-WcaM	gnl\|CDD\|182253	PRK10123, wcaM, putative colanic acid biosynthesis protein; Provisional.	0
NZ_CP019961.1\|WP_000107816.1\|3545664_3546882_+\|putative-colanic-acid-polymerase-WcaD	gnl\|CDD\|188525	TIGR04010, WcaD, putative colanic acid polymerase WcaD. This membrane protein is believed to function as the colanic acid repeating unit polymerase (in an analagous fashion to wzy proteins in O-antigen polymerization).	0
NZ_CP019961.1\|WP_000043654.1\|3549352_3550318_+\|GDP-L-fucose-synthase	gnl\|CDD\|187550	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs. GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP019961.1\|WP_001439135.1\|3553739_3555110_+\|phosphomannomutase-CpsG	gnl\|CDD\|185312	PRK15414, PRK15414, phosphomannomutase.	0
NZ_CP019961.1\|WP_001023912.1\|3544472_3545690_+\|colanic-acid-biosynthesis-glycosyltransferase-WcaC	gnl\|CDD\|274919	TIGR04015, WcaC, colanic acid biosynthesis glycosyl transferase WcaC. This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.	0
NZ_CP019961.1\|WP_001515526.1\|3559687_3560908_+\|colanic-acid-biosynthesis-glycosyltransferase-WcaL	gnl\|CDD\|188520	TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL. This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.	0
NZ_CP019961.1\|WP_000048190.1\|3548228_3549350_+\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_CP019961.1\|WP_000183060.1\|3562487_3563381_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalF	gnl\|CDD\|182252	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF.	0
NZ_CP019961.1\|WP_000699759.1\|3550796_3552020_+\|colanic-acid-biosynthesis-fucosyltransferase-WcaI	gnl\|CDD\|188522	TIGR04007, wcaI, colanic acid biosynthesis glycosyl transferase WcaI. This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.	0
NZ_CP019961.1\|WP_000058514.1\|3556560_3558039_+\|M-antigen-undecaprenyl-disphosphate-flippase	gnl\|CDD\|236697	PRK10459, PRK10459, MOP flippase family protein.	0
NZ_CP019961.1\|WP_000888740.1\|3543987_3544476_+\|colanic-acid-biosynthesis-acetyltransferase-WcaB	gnl\|CDD\|182295	PRK10191, PRK10191, putative acyl transferase; Provisional.	1.22636e-101
NZ_CP019961.1\|WP_001515524.1\|3563752_3564838_+\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|236649	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional.	0
NZ_CP019961.1\|WP_001515523.1\|3564837_3565737_+\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|182184	PRK09987, PRK09987, dTDP-4-dehydrorhamnose reductase; Provisional.	0

>NZ_CP019961.1|WP_000079285.1|3552022_3553459_+|mannose-1-phosphate-guanyltransferase
MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAAKRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELKKYRPDILDACEKAMSAVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAGWSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTKDAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKIPLDLIEVRSGSYLEEDDVVRFADRYGRV
>NZ_CP019961.1|WP_000699759.1|3550796_3552020_+|colanic-acid-biosynthesis-fucosyltransferase-WcaI
MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYYPQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQRRWKPERIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGSKVAQLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADADVDALRNQLGLPDNKKIILYSGNIGEKQGLENVIEAADLLRDEPLIFAIVGQGGGKARLEKMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGNAVITAEAHTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTLDKENVLRQFINDIRG
>NZ_CP019961.1|WP_000479836.1|3550320_3550800_+|GDP-mannose-mannosyl-hydrolase
MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVAEEELLLPDEQHDDYRWLTPDALLASDNVHANSRAYFLAEKRAGVPGL
>NZ_CP019961.1|WP_000043654.1|3549352_3550318_+|GDP-L-fucose-synthase
MSKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRG
>NZ_CP019961.1|WP_000048190.1|3548228_3549350_+|GDP-mannose-4,6-dehydratase
MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES
>NZ_CP019961.1|WP_001153547.1|3547654_3548203_+|colanic-acid-biosynthesis-acetyltransferase-WcaF
MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRAFLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQKSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVIRERVETE
>NZ_CP019961.1|WP_000927089.1|3546892_3547639_+|colanic-acid-biosynthesis-glycosyltransferase-WcaE
MLLSIITVAFRNLEGIVKTHASLAHLAQVEDISFEWIVVDGGSNDGTREYLENLNGIFNLRFVSEPDNGIYDAMNKGIAMAQGKFALFLNSGDIFHQNAANFVRKLKMQKDNVMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKWRYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSKTKALYNKV
>NZ_CP019961.1|WP_000107816.1|3545664_3546882_+|putative-colanic-acid-polymerase-WcaD
MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITR
>NZ_CP019961.1|WP_001023912.1|3544472_3545690_+|colanic-acid-biosynthesis-glycosyltransferase-WcaC
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
>NZ_CP019961.1|WP_000888740.1|3543987_3544476_+|colanic-acid-biosynthesis-acetyltransferase-WcaB
MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPLLVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRGADNMACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKVIK
>NZ_CP019961.1|WP_001439135.1|3553739_3555110_+|phosphomannomutase-CpsG
MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREEARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQITLRDAYVDHLFGYINVKNLMPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTTAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKEKTLGELVRDRMAAFPASGEINSKLAQPVEAINRVEQHFSREALAVDRTDGISMTFADWRFNLRTSNTEPVVRLNVESRGDVPLMEARTRTLLTLLNE
>NZ_CP019961.1|WP_000183130.1|3555164_3556559_+|undecaprenyl-phosphate-glucose-phosphotransferase
MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYGLTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY
>NZ_CP019961.1|WP_000058514.1|3556560_3558039_+|M-antigen-undecaprenyl-disphosphate-flippase
MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGLVVCVVVFLLSDLIGDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTVVSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTADSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCVVGLLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQIINTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSSALGIVLKGQLALGMLLAVQIAAGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRVG
>NZ_CP019961.1|WP_000770796.1|3558410_3559691_+|colanic-acid-biosynthesis-pyruvyl-transferase-WcaK
MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILEACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNTRLSEAVSRERQTGMQMVQSVLERIGEVK
>NZ_CP019961.1|WP_001515526.1|3559687_3560908_+|colanic-acid-biosynthesis-glycosyltransferase-WcaL
MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWAKYNLAARTRWLQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESRNLILSAICGQVATPFHADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDNADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLDTDELAPVVKRAREKVEHDFNQQVINRELASLLQAL
>NZ_CP019961.1|WP_001515525.1|3560918_3562313_+|colanic-acid-biosynthesis-protein-WcaM
MPFKTLSRRTFLTASSALAFLHTPFVRALPARQSVNINDYNPHDWIASFKQAFSEGQTVVVPGGLVCDNINTGIFIPSGKTLHILGSLRGNGRGRFVLQDGSQVTGEEGGSMHNITLDVRGSDCTIKGLAMSGFGPVTQIYIGGKNKRVMRNLTIDNLTVSHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNNIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHLFMRNIKVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSADIDRINHHIVNVEKINFRLPERRE
>NZ_CP019961.1|WP_000183060.1|3562487_3563381_+|UTP--glucose-1-phosphate-uridylyltransferase-GalF
MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE
>NZ_CP019961.1|WP_001515524.1|3563752_3564838_+|dTDP-glucose-4,6-dehydratase
MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYIFEHADICDAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNNEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGAYQSWIEQNYEGRQ
>NZ_CP019961.1|WP_001515523.1|3564837_3565737_+|dTDP-4-dehydrorhamnose-reductase
MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEADATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRMALNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNELFTTTAI
>NZ_CP019961.1|WP_001515522.1|3565794_3566673_+|glucose-1-phosphate-thymidylyltransferase-RfbA
MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLSDGSQWGLNLQYKVQPTPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHDLPKLMDAAVNKESGATVFAYHVNDPERYGVVEFDKNGTAISLEEKPLQPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAYRKGFIDSGQVRVLAEPLKKNAYGQYLLKMVKGY

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Crispr_ID: NZ_CP019961_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_8

3995865-3995988

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019961_8

>merge|NZ_CP019961|8|3995865-3995988|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP019961|8|8|3995865-3995988|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_000493947.1\|3999187_3999829_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP019961.1\|WP_107317017.1\|3993694_3995299_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP019961.1\|WP_001182363.1\|4001307_4002519_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP019961.1\|WP_001069987.1\|3992081_3992867_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP019961.1\|WP_000190982.1\|4003560_4004586_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP019961.1\|WP_000701040.1\|4005139_4006309_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP019961.1\|WP_000528342.1\|3987288_3987498_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP019961.1\|WP_000534307.1\|3996302_3997559_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP019961.1\|WP_000007283.1\|4006543_4007125_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP019961.1\|WP_000212680.1\|3995424_3995730_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP019961.1\|WP_001349911.1\|3991416_3992085_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP019961.1\|WP_089623723.1\|3988599_3990702_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP019961.1\|WP_089623725.1\|4002631_4003564_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP019961.1\|WP_001070230.1\|3987952_3988579_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP019961.1\|WP_107317016.1\|3990705_3991353_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP019961.1\|WP_000587561.1\|3992870_3993683_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP019961.1\|WP_001174961.1\|3997599_3998973_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP019961.1\|WP_000102278.1\|4004884_4004974_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP019961.1\|WP_000098896.1\|3999868_4001017_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP019961.1\|WP_001295403.1\|3985319_3986732_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_000493947.1\|3999187_3999829_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP019961.1\|WP_107317017.1\|3993694_3995299_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP019961.1\|WP_001182363.1\|4001307_4002519_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP019961.1\|WP_001069987.1\|3992081_3992867_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.01591e-161
NZ_CP019961.1\|WP_000190982.1\|4003560_4004586_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP019961.1\|WP_000701040.1\|4005139_4006309_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_CP019961.1\|WP_000528342.1\|3987288_3987498_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP019961.1\|WP_000534307.1\|3996302_3997559_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP019961.1\|WP_000007283.1\|4006543_4007125_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP019961.1\|WP_000212680.1\|3995424_3995730_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	4.48611e-64
NZ_CP019961.1\|WP_001349911.1\|3991416_3992085_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
NZ_CP019961.1\|WP_089623723.1\|3988599_3990702_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP019961.1\|WP_089623725.1\|4002631_4003564_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP019961.1\|WP_001070230.1\|3987952_3988579_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_CP019961.1\|WP_107317016.1\|3990705_3991353_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	6.80758e-121
NZ_CP019961.1\|WP_000587561.1\|3992870_3993683_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	1.59319e-174
NZ_CP019961.1\|WP_001174961.1\|3997599_3998973_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP019961.1\|WP_000098896.1\|3999868_4001017_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP019961.1\|WP_001295403.1\|3985319_3986732_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0

>NZ_CP019961.1|WP_000212680.1|3995424_3995730_-|monooxygenase
MATLLQLHFSFNGPFGDTMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP019961.1|WP_107317017.1|3993694_3995299_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVLWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP019961.1|WP_000587561.1|3992870_3993683_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_CP019961.1|WP_001069987.1|3992081_3992867_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPLPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP019961.1|WP_001349911.1|3991416_3992085_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP019961.1|WP_107317016.1|3990705_3991353_+|YdhW-family-putative-oxidoreductase-system-protein
MGEMNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVALEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP019961.1|WP_089623723.1|3988599_3990702_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGVPCSSRVNITSLSTFTKGNLIVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLISSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
>NZ_CP019961.1|WP_001070230.1|3987952_3988579_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP019961.1|WP_000528342.1|3987288_3987498_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP019961.1|WP_001295403.1|3985319_3986732_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP019961.1|WP_000534307.1|3996302_3997559_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGTGWLKVATGGIVKCTQYGNNGTLSVSDGAIATDVVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIRVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP019961.1|WP_001174961.1|3997599_3998973_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALAEKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR
>NZ_CP019961.1|WP_000493947.1|3999187_3999829_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP019961.1|WP_000098896.1|3999868_4001017_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP019961.1|WP_001182363.1|4001307_4002519_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP019961.1|WP_089623725.1|4002631_4003564_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLQEPEETPATGD
>NZ_CP019961.1|WP_000190982.1|4003560_4004586_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP019961.1|WP_000102278.1|4004884_4004974_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP019961.1|WP_000701040.1|4005139_4006309_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP019961.1|WP_000007283.1|4006543_4007125_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP019961_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019961_9

4648760-4648851

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019961_9

>merge|NZ_CP019961|9|4648760-4648851|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP019961|9|9|4648760-4648851|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019961.1\|WP_107317032.1\|4654578_4655178_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP019961.1\|WP_000191700.1\|4642101_4642740_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP019961.1\|WP_038347116.1\|4638099_4642062_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP019961.1\|WP_032255768.1\|4646627_4647122_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP019961.1\|WP_001044280.1\|4650156_4651398_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP019961.1\|WP_000979516.1\|4637835_4638045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019961.1\|WP_001143120.1\|4649891_4650119_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP019961.1\|WP_032255771.1\|4646026_4646617_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP019961.1\|WP_000787869.1\|4651690_4651939_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182074
NZ_CP019961.1\|WP_089623827.1\|4647142_4648471_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP019961.1\|WP_032255773.1\|4645216_4646017_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP019961.1\|WP_001352489.1\|4643027_4644119_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP019961.1\|WP_089623825.1\|4652056_4652941_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182074
NZ_CP019961.1\|WP_001230242.1\|4657720_4658893_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP019961.1\|WP_001126780.1\|4644822_4645209_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP019961.1\|WP_000420621.1\|4653201_4654122_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP019961.1\|WP_001151437.1\|4649274_4649871_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP019961.1\|WP_038989454.1\|4644118_4644811_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP019961.1\|WP_000024560.1\|4654121_4654427_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP019961.1\|WP_089623824.1\|4655174_4657721_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909

Protein	Function_ID	Function_description	E-value
NZ_CP019961.1\|WP_107317032.1\|4654578_4655178_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	1.19116e-82
NZ_CP019961.1\|WP_000191700.1\|4642101_4642740_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.12845e-153
NZ_CP019961.1\|WP_038347116.1\|4638099_4642062_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP019961.1\|WP_032255768.1\|4646627_4647122_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	2.14732e-104
NZ_CP019961.1\|WP_001044280.1\|4650156_4651398_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP019961.1\|WP_089623825.1\|4652056_4652941_-\|hypothetical-protein	gnl\|CDD\|182074	PRK09784, PRK09784, YccE family protein.	0
NZ_CP019961.1\|WP_001143120.1\|4649891_4650119_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP019961.1\|WP_000787869.1\|4651690_4651939_-\|hypothetical-protein	gnl\|CDD\|182074	PRK09784, PRK09784, YccE family protein.	4.88813e-50
NZ_CP019961.1\|WP_089623827.1\|4647142_4648471_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP019961.1\|WP_032255773.1\|4645216_4646017_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	2.10476e-141
NZ_CP019961.1\|WP_001352489.1\|4643027_4644119_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP019961.1\|WP_000024560.1\|4654121_4654427_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
NZ_CP019961.1\|WP_001230242.1\|4657720_4658893_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP019961.1\|WP_001126780.1\|4644822_4645209_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_CP019961.1\|WP_032255771.1\|4646026_4646617_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	6.44948e-129
NZ_CP019961.1\|WP_000420621.1\|4653201_4654122_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP019961.1\|WP_001151437.1\|4649274_4649871_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_CP019961.1\|WP_038989454.1\|4644118_4644811_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	9.22185e-169
NZ_CP019961.1\|WP_089623824.1\|4655174_4657721_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0

>NZ_CP019961.1|WP_089623827.1|4647142_4648471_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGMNPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAPVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_CP019961.1|WP_032255768.1|4646627_4647122_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCCISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP019961.1|WP_032255771.1|4646026_4646617_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQYVDDAFFAGSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL
>NZ_CP019961.1|WP_032255773.1|4645216_4646017_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAVL
>NZ_CP019961.1|WP_001126780.1|4644822_4645209_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP019961.1|WP_038989454.1|4644118_4644811_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSLARIA
>NZ_CP019961.1|WP_001352489.1|4643027_4644119_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAVRMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_CP019961.1|WP_000191700.1|4642101_4642740_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEIFFNQTVENVQRIIIEGIRPR
>NZ_CP019961.1|WP_038347116.1|4638099_4642062_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPVERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKVNIERHIQTMRSKGRPVFQAVRKNNEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP019961.1|WP_000979516.1|4637835_4638045_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP019961.1|WP_001151437.1|4649274_4649871_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP019961.1|WP_001143120.1|4649891_4650119_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP019961.1|WP_001044280.1|4650156_4651398_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK
>NZ_CP019961.1|WP_000787869.1|4651690_4651939_-|hypothetical-protein
MKNFLTALSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLINTGNHYDVYLPPELFAQAYKLKNKEMNAQLDYLNRYAI
>NZ_CP019961.1|WP_089623825.1|4652056_4652941_-|hypothetical-protein
MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLIENTLVCFMRLYNELRRKVNEEDTPCLECESLEKQLYEMQNDNDLSSFLKTLHAKDTKIYSGVSGGFTYTIKYSQERELVIISLPYRSSETIADFKGYCWLNFIKFIESLCDDVFSEYCLDDENMSVQPEWINTPGISDLDSGIDLSGISFIQSEINKTYGLKYAPVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFYNLREDVKTLFGVDLQSDNKIQGEGSLMSWNFLFFKK
>NZ_CP019961.1|WP_000420621.1|4653201_4654122_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP019961.1|WP_000024560.1|4654121_4654427_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP019961.1|WP_107317032.1|4654578_4655178_-|molecular-chaperone-TorD
MTTLTAQQIACVYAGLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR
>NZ_CP019961.1|WP_089623824.1|4655174_4657721_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAVNRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP019961.1|WP_001230242.1|4657720_4658893_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019961_5	5.5\|2799265\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799265-2799296	32	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	72360-72391	0	1.0
NZ_CP019961_9	9.1\|4648786\|40\|NZ_CP019961\|CRISPRCasFinder	4648786-4648825	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
NZ_CP019961_5	5.9\|2799509\|32\|NZ_CP019961\|CRISPRCasFinder,CRT	2799509-2799540	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	1	0.969
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14210-14244	2	0.943
NZ_CP019961_8	8.1\|3995908\|38\|NZ_CP019961\|CRISPRCasFinder	3995908-3995945	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51848-51882	3	0.914
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110220	4	0.886
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63903-63937	4	0.886
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24794-24828	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24907-24941	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14119-14153	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	170873-170907	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87173-87207	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40381-40415	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	14051-14085	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229117	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229218	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229319	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239611	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239712	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239813	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230523	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230624	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230725	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211493	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211594	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211695	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	145331-145365	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NC_049343	Escherichia phage 500465-2, complete genome	31797-31831	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17899-17933	5	0.857
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	29-63	5	0.857
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	61986-62020	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	210117-210151	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11525-11559	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82856-82890	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102558-102592	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	115819-115853	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP019906	Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence	9275-9309	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4179-4213	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194037	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211764	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211964	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229420	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4178-4212	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204531	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222258	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222458	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239914	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4178-4212	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195365	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213092	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213292	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230826	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4178-4212	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176320	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194047	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194247	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211796	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	93107-93141	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12173-12207	6	0.829
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MF374379	Escherichia phage DN1, complete genome	31172-31206	6	0.829
NZ_CP019961_4	4.8\|2773199\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773199-2773230	32	NZ_KX893538	Pseudomonas fluorescens strain PC20 plasmid pG20, complete sequence	92280-92311	7	0.781
NZ_CP019961_5	5.5\|2799265\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799265-2799296	32	MT446416	UNVERIFIED: Escherichia virus TH47, complete genome	160213-160244	7	0.781
NZ_CP019961_5	5.5\|2799265\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799265-2799296	32	KM507819	Escherichia phage 121Q, complete genome	77721-77752	7	0.781
NZ_CP019961_5	5.9\|2799509\|32\|NZ_CP019961\|CRISPRCasFinder,CRT	2799509-2799540	32	MK455769	Aeromonas phage MJG, complete genome	10369-10400	7	0.781
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	158422-158456	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	27041-27075	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404167	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313606-313640	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	115003-115037	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194130	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194316	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194223	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3336-3370	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	216142-216176	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204624	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204810	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204717	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3335-3369	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	226636-226670	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195458	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195644	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195551	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3335-3369	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	217470-217504	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176413	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176599	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176506	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3335-3369	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	198425-198459	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	64358-64392	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	22622-22656	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141030-141064	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7456-7490	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	6708-6742	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84280-84314	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	83554-83588	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	28008-28042	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6873-6907	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33093	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27316	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27415	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198943	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91452	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	103-137	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40339	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19403-19437	7	0.8
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	108-142	7	0.8
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	NZ_CP053436	Spirosoma sp. TS118 plasmid pTS, complete sequence	23185-23216	8	0.75
NZ_CP019961_4	4.6\|2773077\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773077-2773108	32	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	312486-312517	8	0.75
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	822257-822288	8	0.75
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	265054-265085	8	0.75
NZ_CP019961_4	4.8\|2773199\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773199-2773230	32	CP027478	Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence	337384-337415	8	0.75
NZ_CP019961_4	4.8\|2773199\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773199-2773230	32	CP027479	Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence	189914-189945	8	0.75
NZ_CP019961_4	4.11\|2773382\|32\|NZ_CP019961\|CRISPRCasFinder,CRT	2773382-2773413	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
NZ_CP019961_5	5.7\|2799387\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799387-2799418	32	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	218852-218883	8	0.75
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397122	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386522-386556	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56045-56079	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	111818-111852	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP019906	Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence	17871-17905	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	108-142	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	107-141	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	107-141	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	107-141	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31313-31347	8	0.771
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18285-18319	8	0.771
NZ_CP019961_2	2.1\|761443\|43\|NZ_CP019961\|CRISPRCasFinder	761443-761485	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4037-4079	9	0.791
NZ_CP019961_2	2.1\|761443\|43\|NZ_CP019961\|CRISPRCasFinder	761443-761485	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4036-4078	9	0.791
NZ_CP019961_2	2.1\|761443\|43\|NZ_CP019961\|CRISPRCasFinder	761443-761485	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4036-4078	9	0.791
NZ_CP019961_2	2.1\|761443\|43\|NZ_CP019961\|CRISPRCasFinder	761443-761485	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4036-4078	9	0.791
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	NC_021623	Borrelia hermsii strain HS1 plasmid lp174, complete sequence	4388-4419	9	0.719
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	NZ_CP014350	Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence	4514-4545	9	0.719
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	MK250029	Prevotella phage Lak-C1, complete genome	109932-109963	9	0.719
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	MK250016	Prevotella phage Lak-A1, complete genome	149385-149416	9	0.719
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	MK250019	Prevotella phage Lak-A2, complete genome	72432-72463	9	0.719
NZ_CP019961_5	5.6\|2799326\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799326-2799357	32	AP014022	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, * SEQUENCING IN PROGRESS *	22698-22729	9	0.719
NZ_CP019961_5	5.6\|2799326\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799326-2799357	32	AP014023	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, * SEQUENCING IN PROGRESS *	23700-23731	9	0.719
NZ_CP019961_5	5.7\|2799387\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799387-2799418	32	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	208455-208486	9	0.719
NZ_CP019961_5	5.9\|2799509\|32\|NZ_CP019961\|CRISPRCasFinder,CRT	2799509-2799540	32	NC_047954	Pseudomonas phage Njord, complete genome	11435-11466	9	0.719
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	74476-74510	9	0.743
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	6914-6948	9	0.743
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	21767-21801	9	0.743
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	99613-99647	9	0.743
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	167175-167209	9	0.743
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30213-30247	9	0.743
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
NZ_CP019961_3	3.1\|984481\|38\|NZ_CP019961\|CRISPRCasFinder	984481-984518	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	CAJDKA010000002	Enterococcus phage 163 genome assembly, contig: phage163-genome, whole genome shotgun sequence	135561-135592	10	0.688
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	MT856905	Enterococcus phage vB_EfaM_A2, complete genome	39757-39788	10	0.688
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	MW004544	Enterococcus phage EFGrKN, complete genome	39314-39345	10	0.688
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	MN241318	Enterococcus phage PEf771, complete genome	81969-82000	10	0.688
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	NC_029009	Enterococcus phage EFDG1, complete genome	39358-39389	10	0.688
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	KY549443	Enterococcus phage EFP01, complete genome	116454-116485	10	0.688
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	MH880817	Enterococcus phage EfV12-phi1, complete genome	41045-41076	10	0.688
NZ_CP019961_4	4.3\|2772894\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2772894-2772925	32	MN027503	Enterococcus phage vB_OCPT_Ben, complete genome	111027-111058	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	NZ_CP041068	Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence	15222-15253	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	CP041516	Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence	38867-38898	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	NC_019506	Clostridium phage phiCP13O, complete genome	20539-20570	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	NC_019508	Clostridium phage phiCP34O, complete genome	20153-20184	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	JF767208	Clostridium phage phi13O, complete genome	20539-20570	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	GQ443085	Clostridium phage CP26F, complete genome	20369-20400	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	JF767210	Clostridium phage phi9O, complete genome	20774-20805	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	JF767209	Clostridium phage phi34O, complete genome	20153-20184	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	NC_011318	Clostridium phage 39-O, complete genome	19873-19904	10	0.688
NZ_CP019961_4	4.7\|2773138\|32\|NZ_CP019961\|PILER-CR,CRISPRCasFinder,CRT	2773138-2773169	32	NC_019496	Clostridium phage phiCP26F, complete genome	20369-20400	10	0.688
NZ_CP019961_5	5.5\|2799265\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799265-2799296	32	MF403008	Agrobacterium phage Atu_ph07, complete genome	280549-280580	10	0.688
NZ_CP019961_5	5.7\|2799387\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799387-2799418	32	NZ_CP041349	Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence	27173-27204	10	0.688
NZ_CP019961_5	5.7\|2799387\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799387-2799418	32	NZ_CP041350	Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence	149091-149122	10	0.688
NZ_CP019961_5	5.7\|2799387\|32\|NZ_CP019961\|CRISPRCasFinder,CRT,PILER-CR	2799387-2799418	32	NZ_CP004365	Komagataeibacter xylinus E25 plasmid pGX5, complete sequence	172655-172686	10	0.688
NZ_CP019961_5	5.9\|2799509\|32\|NZ_CP019961\|CRISPRCasFinder,CRT	2799509-2799540	32	NC_047894	Pseudomonas phage uligo, complete genome	11353-11384	10	0.688
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	9677-9711	10	0.714
NZ_CP019961_7	7.1\|3553562\|35\|NZ_CP019961\|CRISPRCasFinder	3553562-3553596	35	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	164412-164446	10	0.714
NZ_CP019961_5	5.2\|2799082\|32\|NZ_CP019961\|CRISPRCasFinder,CRT	2799082-2799113	32	NC_023136	Leisingera methylohalidivorans DSM 14336 plasmid unnamed, complete sequence	124307-124338	11	0.656
NZ_CP019961_5	5.3\|2799143\|32\|NZ_CP019961\|CRISPRCasFinder,CRT	2799143-2799174	32	MN694507	Marine virus AFVG_250M1178, complete genome	3229-3260	11	0.656

1. spacer 5.5|2799265|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

actgcaaagttcttcacgctggtttttatgca	CRISPR spacer
actgcaaagttcttcacgctggtttttatgca	Protospacer
********************************

2. spacer 9.1|4648786|40|NZ_CP019961|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

3. spacer 5.9|2799509|32|NZ_CP019961|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

4. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 2, identity: 0.943

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccg	Protospacer
*****.**.**************************

5. spacer 8.1|3995908|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

6. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 3, identity: 0.914

-gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agctgg-tgccggatgcggcgtaaacgccttatccg	Protospacer
 ***** **.************.*************

7. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 4, identity: 0.886

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccg	Protospacer
***  .**.**************************

8. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 4, identity: 0.886

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccg	Protospacer
***  .**.**************************

9. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cgttgatgtcggatgcggcgtaaacgccttatccg	Protospacer
  * * ***************.*************

10. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cattgatgtcggatgcggcgtaaacgccttatccg	Protospacer
  * * ***************.*************

11. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccg	Protospacer
*.**..**.************.*************

12. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
atgcactgtcggatgcggcgtgaacgccttatccg	Protospacer
..  .******************************

13. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
accgaatgccggatgcggcgtgaacgccttatccg	Protospacer
.*.*. **.**************************

14. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gctttttgccggatgcggcgtaaacgccttatccg	Protospacer
***  .**.************.*************

15. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
atggtttgtcggatgcggcgtgaacgccttatccg	Protospacer
.. * .*****************************

16. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

17. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

18. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

19. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

20. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

21. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

22. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

23. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

24. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

25. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

26. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

27. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccg	Protospacer
  .*.***.**************************

28. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ctcgactgtcggatgcggcgtggacgccttatccg	Protospacer
 ..*.*****************.************

29. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccg	Protospacer
. ** .**.**************************

30. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 5, identity: 0.857

gctggc-tgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
-cggacttgccggatgcggcgtaaacgccttatccg	Protospacer
 * *.* **.************.*************

31. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 5, identity: 0.857

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gcacggtgtcggatgcggcgcgagcgccttatccg	Protospacer
**  * **************.**.***********

32. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

33. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

34. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

35. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

36. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

37. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

38. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ataccgtgtcggatgcggcgtgaacgccttatccg	Protospacer
..    *****************************

39. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgcaaatgtcggatgcggcgtgaacgccttatccg	Protospacer
  ... *****************************

40. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccg	Protospacer
. *  .**.**************************

41. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccg	Protospacer
*. .. **.**************************

42. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccg	Protospacer
. * . **.**************************

43. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccg	Protospacer
  ...***.**************************

44. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP019906 (Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
atgttttgtcggatgcggcgtgaacgccttatccg	Protospacer
..   .*****************************

45. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccg	Protospacer
  ...***.**************************

46. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccg	Protospacer
  *   **.**************************

47. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccg	Protospacer
. *   **.**************************

48. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccg	Protospacer
. *   **.**************************

49. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccg	Protospacer
  .*.***.************.*************

50. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccg	Protospacer
  ...***.**************************

51. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccg	Protospacer
  *   **.**************************

52. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccg	Protospacer
. *   **.**************************

53. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccg	Protospacer
. *   **.**************************

54. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccg	Protospacer
  .*.***.************.*************

55. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccg	Protospacer
  ...***.**************************

56. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccg	Protospacer
  *   **.**************************

57. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccg	Protospacer
. *   **.**************************

58. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccg	Protospacer
. *   **.**************************

59. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccg	Protospacer
  .*.***.************.*************

60. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccg	Protospacer
  ...***.**************************

61. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccg	Protospacer
  *   **.**************************

62. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccg	Protospacer
. *   **.**************************

63. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccg	Protospacer
. *   **.**************************

64. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccg	Protospacer
  .*.***.************.*************

65. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgtttttgccggatgcggcgtgaacgccttatccg	Protospacer
  *  .**.**************************

66. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gccgaacgccggatgcggcgtggacgccttatccg	Protospacer
**.*. .*.*************.************

67. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 6, identity: 0.829

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccg	Protospacer
  *   **.**************************

68. spacer 4.8|2773199|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX893538 (Pseudomonas fluorescens strain PC20 plasmid pG20, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtctcgagcgccggacgattcaaaaccagc	CRISPR spacer
acgattacagcgccggccgattcaaaaccagt	Protospacer
.** .*  ******** **************.

69. spacer 5.5|2799265|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to MT446416 (UNVERIFIED: Escherichia virus TH47, complete genome) position: , mismatch: 7, identity: 0.781

actgcaaagttcttcacgctggtt-----tttatgca	CRISPR spacer
actgcaaagttcttcaagctgtttagctgttt-----	Protospacer
**************** **** **     ***

70. spacer 5.5|2799265|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 7, identity: 0.781

actgcaaagttcttcacgctggtt-----tttatgca	CRISPR spacer
actgcaaagttcttcaagctgtttagctgttt-----	Protospacer
**************** **** **     ***

71. spacer 5.9|2799509|32|NZ_CP019961|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   *

72. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccg	Protospacer
  ....**.**************************

73. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cgttcataccggatgcggcgtgaacgccttatccg	Protospacer
  *   *..**************************

74. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccg	Protospacer
 .*  .**.************.*************

75. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccg	Protospacer
.* .. **.************.*************

76. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccactgccggatgcggcgtaaacgccttatccg	Protospacer
  . .***.************.*************

77. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccg	Protospacer
  . ..**.**************************

78. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccg	Protospacer
  . ..**.**************************

79. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccg	Protospacer
  . .***.*************.************

80. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tacaactgccggatgcggcgtaaacgccttatccg	Protospacer
  ...***.************.*************

81. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
aatcaatgtcggatgcggcgcgagcgccttatccg	Protospacer
. * . **************.**.***********

82. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccg	Protospacer
  . ..**.**************************

83. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccg	Protospacer
  . ..**.**************************

84. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccg	Protospacer
  . .***.*************.************

85. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tacaactgccggatgcggcgtaaacgccttatccg	Protospacer
  ...***.************.*************

86. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
aatcaatgtcggatgcggcgcgagcgccttatccg	Protospacer
. * . **************.**.***********

87. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccg	Protospacer
  . ..**.**************************

88. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccg	Protospacer
  . ..**.**************************

89. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccg	Protospacer
  . .***.*************.************

90. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tacaactgccggatgcggcgtaaacgccttatccg	Protospacer
  ...***.************.*************

91. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
aatcaatgtcggatgcggcgcgagcgccttatccg	Protospacer
. * . **************.**.***********

92. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccg	Protospacer
  . ..**.**************************

93. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccg	Protospacer
  . ..**.**************************

94. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccg	Protospacer
  . .***.*************.************

95. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tacaactgccggatgcggcgtaaacgccttatccg	Protospacer
  ...***.************.*************

96. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
aatcaatgtcggatgcggcgcgagcgccttatccg	Protospacer
. * . **************.**.***********

97. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgaacgccggatgcggcgtgaacgccttatccg	Protospacer
  .*. .*.**************************

98. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gaaagtggccggatgcggcgtgaacgccttttccg	Protospacer
*  .*. *.********************* ****

99. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccg	Protospacer
.*   .**.******************** *****

100. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccg	Protospacer
  ....**.**************************

101. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaactgccggatgcggcgtgaatgccttatccg	Protospacer
  ...***.***************.**********

102. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccg	Protospacer
  ....**.**************************

103. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaactgccggatgcggcgtgaatgccttatccg	Protospacer
  ...***.***************.**********

104. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccg	Protospacer
 .... **.**************************

105. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccg	Protospacer
 .   .**.**************************

106. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccg	Protospacer
.*   .**.******************** *****

107. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccg	Protospacer
  ...*.*.**************************

108. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccg	Protospacer
  ...*.*.**************************

109. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatcca	Protospacer
  *   **.*************************.

110. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatcca	Protospacer
  *   **.*************************.

111. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacgatcgccggatgcggcgtgaacgccttatccg	Protospacer
  .*...*.**************************

112. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccg	Protospacer
  *   **.************.*************

113. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccg	Protospacer
  *   **.*********.****************

114. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 7, identity: 0.8

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccg	Protospacer
 .  *.**.************.*************

115. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

116. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

117. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

118. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

119. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053436 (Spirosoma sp. TS118 plasmid pTS, complete sequence) position: , mismatch: 8, identity: 0.75

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
tctttgcggaaacgcaaaatagtttatgtatg	Protospacer
 *.* .  ***************** * ****

120. spacer 4.6|2773077|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgcgcggcgggtgagtccgtgttttatac	CRISPR spacer
ggcggcgcggcgggtgagtcggtggtagctgc	Protospacer
 ** **************** *** *   *.*

121. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 8, identity: 0.75

ccatgactataaaagcttatattttgataaat	CRISPR spacer
gcaggacaataaaagcttatatttggggatag	Protospacer
 ** *** **************** *. * *

122. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccatga-ctataaaagcttatattttgataaat	CRISPR spacer
-aataatctataaaaccttatatttttatatta	Protospacer
  **.* ******** ********** ***

123. spacer 4.8|2773199|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to CP027478 (Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtctcgagcgccggacgattcaaaaccagc	CRISPR spacer
acgatcacagcgccggccgattcaaaaccagt	Protospacer
.** ..  ******** **************.

124. spacer 4.8|2773199|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to CP027479 (Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtctcgagcgccggacgattcaaaaccagc	CRISPR spacer
acgatcacagcgccggccgattcaaaaccagt	Protospacer
.** ..  ******** **************.

125. spacer 4.11|2773382|32|NZ_CP019961|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

126. spacer 5.7|2799387|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
aatctacaggccgtgacggttgtcatggaggc	Protospacer
     *****************.*** *** *

127. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccg	Protospacer
  ....**.************.*************

128. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccg	Protospacer
  ... **.************.*************

129. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccg	Protospacer
  . ..**.************.*************

130. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttttcaggtcggatgcggcgtgaacgcattattcg	Protospacer
 .*    ******************** ****.**

131. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP019906 (Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
catcatggccggatgcggcgttaacgccttatccg	Protospacer
  * .. *.************ *************

132. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttttcaggtcggatgcggcgtgaacgcattattcg	Protospacer
 .*    ******************** ****.**

133. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttttcaggtcggatgcggcgtgaacgcattattcg	Protospacer
 .*    ******************** ****.**

134. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttttcaggtcggatgcggcgtgaacgcattattcg	Protospacer
 .*    ******************** ****.**

135. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttttcaggtcggatgcggcgtgaacgcattattcg	Protospacer
 .*    ******************** ****.**

136. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccg	Protospacer
. ... **.************.*************

137. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 8, identity: 0.771

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttttcaggtcggatgcggcgtgaacgcattattcg	Protospacer
 .*    ******************** ****.**

138. spacer 2.1|761443|43|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

139. spacer 2.1|761443|43|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

140. spacer 2.1|761443|43|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

141. spacer 2.1|761443|43|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

142. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

143. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

144. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

145. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

146. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

147. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

148. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

149. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

150. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

151. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

152. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

153. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

154. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

155. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

156. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

157. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

158. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

159. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tgaggcagataaaagcttatatttggctaaag	Protospacer
. * *   **************** * ****

160. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tgaggcagataaaagcttatatttggctaaag	Protospacer
. * *   **************** * ****

161. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*

162. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*

163. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*

164. spacer 5.6|2799326|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to AP014022 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccagccgaaacaacgccagcaaaatcgaccgc	CRISPR spacer
ccagccaaaacatcgccagcaaaaccttggag	Protospacer
******.***** ***********.*    .

165. spacer 5.6|2799326|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to AP014023 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccagccgaaacaacgccagcaaaatcgaccgc	CRISPR spacer
ccagccaaaacatcgccagcaaaaccctggag	Protospacer
******.***** ***********.*    .

166. spacer 5.7|2799387|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gctgcacagggtgtgacggttgccattgccga	Protospacer
 * * ***** .****************

167. spacer 5.9|2799509|32|NZ_CP019961|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.

168. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.743

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
aaagattaccggatgcggcgtgaacgtcttatcca	Protospacer
.  *..*..*****************.*******.

169. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.743

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gggcagcgccggatgcggcgtaagcgccttatccg	Protospacer
*   . .*.************.*.***********

170. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.743

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
caccaccgccggatgcggcgcgagcgccttatccg	Protospacer
  . .*.*.***********.**.***********

171. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.743

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
aaagattaccggatgcggcgtgaacgtcttatcca	Protospacer
.  *..*..*****************.*******.

172. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.743

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
gggcagcgccggatgcggcgtaagcgccttatccg	Protospacer
*   . .*.************.*.***********

173. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.743

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
cacaaatgccggatgcggcgtaaacgccttatctg	Protospacer
  ... **.************.***********.*

174. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

175. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

176. spacer 3.1|984481|38|NZ_CP019961|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

177. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to CAJDKA010000002 (Enterococcus phage 163 genome assembly, contig: phage163-genome, whole genome shotgun sequence) position: , mismatch: 10, identity: 0.688

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

178. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to MT856905 (Enterococcus phage vB_EfaM_A2, complete genome) position: , mismatch: 10, identity: 0.688

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

179. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to MW004544 (Enterococcus phage EFGrKN, complete genome) position: , mismatch: 10, identity: 0.688

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

180. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to MN241318 (Enterococcus phage PEf771, complete genome) position: , mismatch: 10, identity: 0.688

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

181. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NC_029009 (Enterococcus phage EFDG1, complete genome) position: , mismatch: 10, identity: 0.688

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

182. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to KY549443 (Enterococcus phage EFP01, complete genome) position: , mismatch: 10, identity: 0.688

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

183. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to MH880817 (Enterococcus phage EfV12-phi1, complete genome) position: , mismatch: 10, identity: 0.688

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

184. spacer 4.3|2772894|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to MN027503 (Enterococcus phage vB_OCPT_Ben, complete genome) position: , mismatch: 10, identity: 0.688

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

185. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041068 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tttggtaaataaatgcttattttttgataaaa	Protospacer
..  *   ***** ****** **********

186. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to CP041516 (Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tttggtaaataaatgcttattttttgataaaa	Protospacer
..  *   ***** ****** **********

187. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NC_019506 (Clostridium phage phiCP13O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

188. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NC_019508 (Clostridium phage phiCP34O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

189. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to JF767208 (Clostridium phage phi13O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

190. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to GQ443085 (Clostridium phage CP26F, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

191. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to JF767210 (Clostridium phage phi9O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

192. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to JF767209 (Clostridium phage phi34O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

193. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NC_011318 (Clostridium phage 39-O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

194. spacer 4.7|2773138|32|NZ_CP019961|PILER-CR,CRISPRCasFinder,CRT matches to NC_019496 (Clostridium phage phiCP26F, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

195. spacer 5.5|2799265|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 10, identity: 0.688

actgcaaagttcttcacgctggtttttatgca	CRISPR spacer
cataagaagtgcttcacgctggttttcatcag	Protospacer
  *. .**** ***************.**  .

196. spacer 5.7|2799387|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gacggacaggccgccacggttgccatcaggaa	Protospacer
   **********. ***********...*

197. spacer 5.7|2799387|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

198. spacer 5.7|2799387|32|NZ_CP019961|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

199. spacer 5.9|2799509|32|NZ_CP019961|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .

200. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 10, identity: 0.714

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttatcttgccggatgcggcgtgaacaccttactcg	Protospacer
 .   .**.****************.*****..**

201. spacer 7.1|3553562|35|NZ_CP019961|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 10, identity: 0.714

gctggctgtcggatgcggcgtgaacgccttatccg	CRISPR spacer
ttatcttgccggatgcggcgtgaacaccttactcg	Protospacer
 .   .**.****************.*****..**

202. spacer 5.2|2799082|32|NZ_CP019961|CRISPRCasFinder,CRT matches to NC_023136 (Leisingera methylohalidivorans DSM 14336 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

cgtccgcggctgcaactgatgccggggcttat	CRISPR spacer
tcaagacggctgcaaacgatgccggggctagg	Protospacer
.    .********* .************ .

203. spacer 5.3|2799143|32|NZ_CP019961|CRISPRCasFinder,CRT matches to MN694507 (Marine virus AFVG_250M1178, complete genome) position: , mismatch: 11, identity: 0.656

aaccttgtcgggtcgcccgtgcgtcatgatga	CRISPR spacer
tggtatgtcgggtagcccgtgcgccatgcccg	Protospacer
 . . ******** *********.**** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

186 : 52717

Escherichia_phage(39.02%)

protease,capsid,portal,integrase,lysis,holin,tail,tRNA,terminase,plate,head

attL 19864:19879|attR 43019:43034

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159048238.1\|186_756_+\|tail	phage tail protein	K7PH60	Enterobacterial_phage	2.1e-45	57.5
WP_000613358.1\|755_1349_+\|tail	tail assembly protein	Q9MCR5	Enterobacteria_phage	2.7e-59	64.4
WP_000978831.1\|1320_1764_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	3.3e-46	62.4
WP_107316896.1\|2920_3532_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.1e-116	99.5
WP_107316897.1\|3524_4433_-\|plate	baseplate assembly protein	U5N3T9	Enterobacteria_phage	1.3e-161	99.3
WP_000127173.1\|4437_4785_-\|plate	baseplate assembly protein W	A0A0F7L9X3	Escherichia_phage	8.5e-58	99.1
WP_006778005.1\|4781_5417_-\|plate	phage baseplate assembly protein V	A0A0F7LBP2	Escherichia_phage	1.6e-110	97.6
WP_001001782.1\|5483_5936_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	4.1e-76	99.3
WP_053285572.1\|5928_6396_-\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	1.3e-80	96.8
WP_107316898.1\|6503_6929_-\|lysis	LysB family phage lysis regulatory protein	Q858W0	Yersinia_virus	1.2e-64	95.7
WP_107316899.1\|6916_7342_-	protein lysA	A0A0F7LBP4	Escherichia_phage	3.6e-58	95.7
WP_001144101.1\|7356_7854_-	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_000123123.1\|7853_8135_-\|holin	holin	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_000846409.1\|8138_8342_-\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000988633.1\|8341_8851_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_021570157.1\|8950_9694_-\|terminase	terminase endonuclease subunit	A0A0F7LBP7	Escherichia_phage	2.1e-125	99.6
WP_107316900.1\|9697_10771_-\|capsid	phage major capsid protein, P2 family	Q94MK2	Enterobacteria_phage	1.9e-201	99.7
WP_097755140.1\|10829_11684_-\|capsid	GPO family capsid scaffolding protein	Q778Z1	Enterobacteria_phage	1.6e-134	98.6
WP_000156872.1\|11857_13630_+\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	100.0
WP_107316901.1\|13629_14664_+\|portal	phage portal protein	Q858W8	Yersinia_virus	6.0e-200	98.8
WP_107316902.1\|14856_15858_-	hypothetical protein	NA	NA	NA	NA
WP_021530418.1\|16327_17872_+	RNA-directed DNA polymerase	Q2P9X0	Enterobacteria_phage	1.4e-288	99.0
WP_107316903.1\|18359_20636_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	97.6
19864:19879	attL	NA	NA	NA	NA
WP_000027672.1\|20625_20901_-	DUF5405 family protein	S4TP00	Salmonella_phage	8.6e-45	98.9
WP_001113259.1\|20897_21122_-	hypothetical protein	Q858T6	Yersinia_virus	1.1e-34	97.3
WP_001277944.1\|21121_21424_-	DUF5405 family protein	Q7Y4C1	Escherichia_virus	5.5e-45	94.0
WP_021530416.1\|21423_21648_-	DUF2732 family protein	S4TP68	Salmonella_phage	2.0e-31	97.3
WP_000217671.1\|21711_22212_-	hypothetical protein	S4TTB7	Salmonella_phage	1.7e-91	99.4
WP_000022051.1\|22389_22746_-	hypothetical protein	A0A0F7LDH4	Escherichia_phage	1.1e-63	100.0
WP_000072552.1\|22850_23162_+	helix-turn-helix transcriptional regulator	Q1JS25	Enterobacteria_phage	4.3e-53	100.0
WP_000023391.1\|23255_24251_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	7.1e-190	99.7
WP_000067977.1\|24282_25080_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	1.3e-21	26.6
WP_001190363.1\|25161_25752_-	NAD(P)H oxidoreductase	NA	NA	NA	NA
WP_001242678.1\|25851_26760_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_097492905.1\|26760_28191_-	amino acid permease	NA	NA	NA	NA
WP_000109295.1\|28400_29549_-	MFS transporter	NA	NA	NA	NA
WP_089623817.1\|29862_30489_+	hydrolase	NA	NA	NA	NA
WP_089623816.1\|30523_31387_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000213098.1\|31388_32006_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_000850303.1\|32016_34461_-	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	6.6e-221	49.8
WP_000886683.1\|34699_35992_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000067755.1\|36082_37426_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_089623815.1\|37436_38048_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_073544309.1\|38202_42231_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_000228473.1\|42365_42860_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_000537418.1\|43404_44370_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	8.5e-63	44.6
43019:43034	attR	NA	NA	NA	NA
WP_107316904.1\|44492_46259_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	7.0e-23	24.3
WP_001400164.1\|46259_47981_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	9.9e-22	25.2
WP_001241677.1\|48022_48727_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|49011_49230_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_000934040.1\|50089_52366_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.5e-166	42.2
WP_000520781.1\|52396_52717_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4

DBSCAN-SWA_2

366033 : 420769

Enterobacteria_phage(54.55%)

protease,integrase,lysis,tail,terminase,transposase

attL 400849:400895|attR 420783:420829

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089624135.1\|366033_367146_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000956455.1\|367222_367375_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_085955856.1\|367472_368842_-\|transposase	IS3-like element IS150 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.4e-111	99.5
WP_001719814.1\|369109_370228_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_000682514.1\|370293_370542_+	DUF1158 domain-containing protein	NA	NA	NA	NA
WP_000360951.1\|370606_370975_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_097404168.1\|371068_371722_+	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA
WP_001153148.1\|371829_373077_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_000786320.1\|373144_374521_-	phenylalanine transporter	NA	NA	NA	NA
WP_001400043.1\|374622_377766_-	Cu(+)/Ag(+) efflux RND transporter permease subunit CusA	S5VTK5	Leptospira_phage	2.2e-59	21.9
WP_000717157.1\|377777_379001_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB	NA	NA	NA	NA
WP_000709865.1\|379016_379349_-	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF	NA	NA	NA	NA
WP_000074234.1\|379506_380880_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC	NA	NA	NA	NA
WP_000770953.1\|381036_381720_+	copper response regulator transcription factor CusR	W8CYM9	Bacillus_phage	1.0e-30	35.1
WP_000253805.1\|381709_383158_+	Cu(+)/Ag(+) sensor histidine kinase CusS	A0A1V0SGX0	Hokovirus	3.9e-11	26.1
WP_107316917.1\|383894_385796_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.1e-28	26.3
WP_001160804.1\|385823_386285_+	DcrB-related protein	NA	NA	NA	NA
WP_089624128.1\|386304_390822_+	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	3.2e-19	31.5
WP_000889443.1\|390854_391115_+	hypothetical protein	NA	NA	NA	NA
WP_001300892.1\|391240_391402_+	hypothetical protein	NA	NA	NA	NA
WP_000420970.1\|392366_393503_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_089624123.1\|395997_398970_+	bacteriophage adsorption protein NfrA	NA	NA	NA	NA
WP_001224575.1\|398970_399861_+	DUF4434 family protein	NA	NA	NA	NA
WP_001177481.1\|400043_400805_+	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA
400849:400895	attL	NA	NA	NA	NA
WP_001201845.1\|401317_402271_+\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
WP_000386784.1\|402520_403270_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_122992210.1\|404132_404801_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001598023.1\|404855_405440_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.5e-102	94.3
WP_089624121.1\|406059_406644_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	1.3e-87	97.1
WP_001309326.1\|407032_407266_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
WP_000079508.1\|407323_407734_+	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
WP_016245257.1\|408412_408901_-	GIY-YIG nuclease family protein	K7P7S3	Enterobacteria_phage	1.6e-86	99.4
WP_000092271.1\|409106_409565_-\|lysis	lysis protein	K7PJW6	Enterobacteria_phage	6.2e-72	95.4
WP_052916486.1\|409561_410059_-	lysozyme	M1FJA0	Enterobacteria_phage	9.3e-90	97.0
WP_000839596.1\|410058_410274_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_089624070.1\|410847_411945_+	porin	Q1MVN1	Enterobacteria_phage	2.2e-155	76.3
WP_001204791.1\|412134_412518_-	antitermination protein QuuD	A0A088CD47	Shigella_phage	4.4e-55	83.3
WP_000971057.1\|412603_412744_-	YlcG family protein	K7PHH3	Enterobacteria_phage	7.2e-08	67.4
WP_001099522.1\|412740_413103_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	5.6e-60	96.5
WP_000028392.1\|413474_414107_+	LexA family transcriptional regulator	K7P850	Enterobacteria_phage	1.6e-118	99.5
WP_000618037.1\|414103_414508_+	hypothetical protein	Q716D7	Shigella_phage	4.3e-69	98.5
WP_000340004.1\|414861_415185_+	antitermination protein	A4KWR8	Enterobacteria_phage	1.4e-49	94.3
WP_107316918.1\|415181_416063_+	hypothetical protein	NA	NA	NA	NA
WP_000065384.1\|416251_416620_+	DUF2528 family protein	M1FPD2	Enterobacteria_phage	2.2e-64	98.4
WP_001198861.1\|416692_416857_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000372939.1\|416825_416990_+	host cell division inhibitory peptide Kil	A0A0P0ZC96	Stx2-converting_phage	3.0e-21	96.2
WP_000995439.1\|417043_417340_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_000100845.1\|417345_418131_+	phage recombination protein Bet	A0A0N7KZJ3	Stx2-converting_phage	1.1e-148	100.0
WP_049022329.1\|418161_418308_+	DUF1317 family protein	A0A1U8QQC1	Enterobacteria_phage	2.1e-18	93.8
WP_089624069.1\|418280_418472_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	6.2e-26	96.8
WP_001443983.1\|418482_418764_+	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	7.2e-47	98.9
WP_000763385.1\|418862_419081_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	7.5e-36	100.0
WP_000488407.1\|419128_419407_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
WP_000446905.1\|419378_419750_+	helix-turn-helix domain-containing protein	M1FJ59	Enterobacteria_phage	2.1e-46	81.0
WP_000051902.1\|419605_420769_+\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.0e-200	86.6
420783:420829	attR	NA	NA	NA	NA

DBSCAN-SWA_3

654741 : 739901

Enterobacteria_phage(33.9%)

protease,capsid,portal,integrase,tail,holin,terminase,plate,transposase,head

attL 733298:733347|attR 747559:747608

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000131044.1\|654741_656775_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
WP_001335745.1\|656903_657491_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_001399954.1\|657504_658977_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001159094.1\|658990_660661_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
WP_001209100.1\|660873_661542_+	hypothetical protein	NA	NA	NA	NA
WP_000370307.1\|661784_662480_-	lactate utilization protein C	NA	NA	NA	NA
WP_000023927.1\|662472_663900_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001102108.1\|663910_664630_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000339594.1\|665156_666011_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_107316923.1\|666236_667562_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.9e-113	47.6
WP_000474077.1\|667670_667907_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001299021.1\|667918_668512_+	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_122992209.1\|669101_669953_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_089624057.1\|670092_674349_-	intimin-like adhesin FdeC	NA	NA	NA	NA
WP_000662258.1\|675464_675566_+	hypothetical protein	NA	NA	NA	NA
WP_000803998.1\|675929_676193_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000866436.1\|676192_676333_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_001147279.1\|676367_676595_-	hypothetical protein	NA	NA	NA	NA
WP_001323479.1\|677418_677961_+	ECP biosynthesis operon DNA-binding transcriptional regulator EcpR	NA	NA	NA	NA
WP_107316924.1\|678035_678623_+	common pilus major fimbrillin subunit EcpA	NA	NA	NA	NA
WP_001399951.1\|678680_679349_+	hypothetical protein	NA	NA	NA	NA
WP_089624060.1\|681889_683533_+	fimbrial adhesin EcpD	NA	NA	NA	NA
WP_089624061.1\|683501_684212_+	hypothetical protein	NA	NA	NA	NA
WP_001303809.1\|684524_684854_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_000070699.1\|686132_686822_+	aldehyde dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_000643326.1\|686818_687775_+	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA
WP_000667017.1\|687771_689970_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	A0A0P0I429	Acinetobacter_phage	2.5e-38	25.8
WP_000121359.1\|689979_690936_+	molybdenum cofactor insertion chaperone PaoD	NA	NA	NA	NA
WP_001111348.1\|690914_691325_+	hypothetical protein	NA	NA	NA	NA
WP_107316925.1\|691943_694145_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_107316926.1\|694793_695336_+\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	6.6e-57	67.1
WP_107317037.1\|695350_695953_+\|tail	tail fiber assembly protein	Q9MCR5	Enterobacteria_phage	1.1e-95	88.8
WP_000978830.1\|695924_696368_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	5.1e-47	63.1
WP_107316927.1\|696367_696991_-	hypothetical protein	U5P0I1	Shigella_phage	2.9e-64	69.6
WP_000383559.1\|696994_697579_-	YmfQ family protein	O22003	Shigella_phage	2.4e-113	99.5
WP_107316928.1\|697569_698628_-\|plate	baseplate J/gp47 family protein	M1FQW3	Enterobacteria_phage	9.5e-201	99.1
WP_000424737.1\|698614_699040_-	hypothetical protein	U5P0R9	Shigella_phage	6.7e-81	99.3
WP_001259084.1\|699039_699588_-\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	5.1e-97	98.9
WP_000999510.1\|699587_700667_-\|plate	baseplate protein	U5P0H6	Shigella_phage	5.3e-207	100.0
WP_001368756.1\|700663_701992_-	DNA circularization protein	Q8SBG8	Shigella_phage	1.9e-246	98.9
WP_000807177.1\|702052_703888_-\|tail	phage tail tape measure protein	S5FM63	Shigella_phage	1.7e-306	99.2
WP_000661054.1\|704029_704299_-\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	3.5e-43	100.0
WP_000090997.1\|704298_704655_-	hypothetical protein	U5P076	Shigella_phage	9.0e-63	99.2
WP_088551291.1\|704654_706151_-\|tail	phage tail protein	S5FKL0	Shigella_phage	2.0e-276	99.0
WP_000497753.1\|706134_706305_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	2.7e-25	98.2
WP_000779292.1\|706313_706874_-	hypothetical protein	M1FQV7	Enterobacteria_phage	1.0e-105	100.0
WP_000224834.1\|706870_707377_-	hypothetical protein	M1FPE2	Enterobacteria_phage	6.6e-83	92.3
WP_088551289.1\|707351_707762_-\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	1.4e-70	94.1
WP_000927715.1\|707758_708082_-\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	3.3e-56	98.1
WP_000601363.1\|708084_708285_-	hypothetical protein	S5FNU1	Shigella_phage	1.7e-26	98.5
WP_106485385.1\|708334_709540_-\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	5.3e-224	99.8
WP_001193631.1\|709554_710205_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	2.5e-119	100.0
WP_000466255.1\|710182_711424_-\|portal	phage portal protein	U5P411	Shigella_phage	2.0e-242	99.8
WP_000605605.1\|711423_711606_-	hypothetical protein	S5FXQ9	Shigella_phage	3.8e-25	98.3
WP_122987458.1\|711617_713114_-\|terminase	terminase large subunit	A0A1C9IIA1	Salmonella_phage	8.2e-299	99.4
WP_000929175.1\|713347_713842_-\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	3.9e-88	99.4
WP_106485386.1\|713967_714318_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	8.9e-63	95.7
WP_107316929.1\|714438_716892_-	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	2.2e-83	48.6
WP_096939913.1\|717282_717675_-	DUF2570 domain-containing protein	U5P0U9	Shigella_phage	1.6e-52	85.4
WP_107316930.1\|717658_718135_-	glycoside hydrolase family 104 protein	U5P0A9	Shigella_phage	1.7e-85	96.8
WP_000544528.1\|718121_718427_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	7.0e-40	87.6
WP_039000348.1\|718748_719438_-	antitermination protein	I6PDF8	Cronobacter_phage	1.4e-56	46.8
WP_000971094.1\|719434_719575_-	YlcG family protein	K7PHH3	Enterobacteria_phage	1.7e-09	68.9
WP_024222012.1\|719571_719934_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	9.5e-60	94.9
WP_000774473.1\|719930_720221_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	1.1e-47	93.8
WP_000224914.1\|720213_720384_-	hypothetical protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
WP_001053012.1\|720383_720839_-	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	9.2e-60	66.9
WP_001309322.1\|720835_720937_-	hypothetical protein	NA	NA	NA	NA
WP_053265998.1\|721113_722532_+	hypothetical protein	NA	NA	NA	NA
WP_001697053.1\|722583_722838_-	hypothetical protein	NA	NA	NA	NA
WP_001697051.1\|722902_723190_-	ren protein from phage origin	A0A0N6WES4	Escherichia_phage	1.5e-44	96.8
WP_107316931.1\|723186_723888_-	Replication protein P	A0A0P0ZD31	Stx2-converting_phage	6.0e-127	97.4
WP_159048239.1\|723884_724814_-	replication protein	A0A0M5M7Y1	Salmonella_phage	8.0e-111	64.4
WP_107316933.1\|724900_725440_-	regulator	M9NZI6	Enterobacteria_phage	2.0e-61	66.1
WP_000184665.1\|725470_725698_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	3.8e-22	69.0
WP_032316961.1\|725808_726501_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.9e-110	85.8
WP_137325925.1\|728514_728805_+	hypothetical protein	K7P6H3	Enterobacteria_phage	2.9e-27	83.8
WP_000995455.1\|728880_729177_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	8.1e-49	99.0
WP_105906434.1\|729182_729968_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	1.1e-148	99.6
WP_107316935.1\|729964_730645_+	YqaJ viral recombinase family protein	A0A0N6WET1	Escherichia_phage	6.0e-132	99.6
WP_072217314.1\|730641_730824_+	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	2.6e-26	95.0
WP_000548531.1\|730796_730988_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
WP_077871858.1\|730998_731280_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	3.6e-46	97.8
WP_000763385.1\|731378_731597_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	7.5e-36	100.0
WP_000488407.1\|731644_731923_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
WP_000446900.1\|731894_732245_+	helix-turn-helix domain-containing protein	M1FJ59	Enterobacteria_phage	8.6e-58	96.6
733298:733347	attL	NA	NA	NA	NA
WP_024046444.1\|733435_734509_+\|integrase	site-specific integrase	W6MYA3	Pseudomonas_phage	1.9e-47	38.0
WP_024046445.1\|734526_735924_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_024046447.1\|736153_736366_-	hypothetical protein	NA	NA	NA	NA
WP_024046448.1\|736435_737830_-	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
WP_107316936.1\|738017_738674_-	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
WP_085947771.1\|738739_739901_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
747559:747608	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2812978 : 2820118

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001278994.1\|2812978_2813617_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590403.1\|2813613_2814876_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.7e-135	61.4
WP_000847985.1\|2814872_2815781_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_001300386.1\|2815976_2816744_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	7.4e-70	56.3
WP_001141322.1\|2816794_2817451_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	6.2e-49	46.3
WP_089623946.1\|2817556_2820118_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.0e-30	20.7

DBSCAN-SWA_5

2899839 : 2909407

Enterobacteria_phage(83.33%)

capsid,integrase

attL 2899406:2899423|attR 2909422:2909439

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2899406:2899423	attL	NA	NA	NA	NA
WP_107316983.1\|2899839_2902173_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	85.5
WP_097433382.1\|2902187_2902508_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_107316984.1\|2902504_2902732_-	hypothetical protein	NA	NA	NA	NA
WP_107316985.1\|2902728_2903277_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.2e-29	65.8
WP_000556587.1\|2903273_2903540_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_024134649.1\|2903859_2904048_-	hypothetical protein	NA	NA	NA	NA
WP_107316986.1\|2903960_2904821_+\|capsid	capsid protein	NA	NA	NA	NA
WP_000468229.1\|2904824_2905064_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.7e-20	61.7
WP_058663597.1\|2905079_2905646_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	3.9e-60	64.9
WP_061353170.1\|2906026_2906872_-	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_061353169.1\|2906873_2908211_-	AAA family ATPase	NA	NA	NA	NA
WP_061353168.1\|2908213_2909407_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	2.8e-108	50.8
2909422:2909439	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3199749 : 3205503

Enterobacteria_phage(69.23%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001163428.1\|3199749_3199950_-	response regulator inhibitor TorI	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
WP_089623919.1\|3200361_3200715_-	DUF551 domain-containing protein	A0A0P0ZD75	Stx2-converting_phage	3.0e-34	90.4
WP_089623920.1\|3200711_3201095_-	hypothetical protein	A0A088CE95	Shigella_phage	1.6e-41	73.3
WP_089623921.1\|3201608_3202064_-	ead/Ea22-like family protein	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	1.4e-55	98.2
WP_001214446.1\|3202060_3202225_-	DUF2737 family protein	K7P716	Enterobacteria_phage	6.5e-24	100.0
WP_021560265.1\|3202235_3202532_-	DUF2856 family protein	Q76H42	Enterobacteria_phage	4.3e-42	89.8
WP_040075010.1\|3202555_3202939_-	hypothetical protein	K7P7R8	Enterobacteria_phage	6.5e-67	99.2
WP_000031367.1\|3202938_3203544_-	ERF family protein	K7P6W7	Enterobacteria_phage	4.1e-108	100.0
WP_001243355.1\|3203800_3203953_-	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	4.7e-21	100.0
WP_000972063.1\|3203937_3204072_-	hypothetical protein	K7PHK2	Enterobacteria_phage	3.1e-16	100.0
WP_089623923.1\|3204442_3204742_-	hypothetical protein	K7PH98	Enterobacteria_phage	2.1e-49	96.9
WP_089623924.1\|3204794_3205244_-	hypothetical protein	I6RSN8	Salmonella_phage	6.2e-69	87.2
WP_089623925.1\|3205302_3205503_-	restriction endonuclease	A0A0K2FJE6	Enterobacteria_phage	2.7e-32	97.0

DBSCAN-SWA_7

3208620 : 3216640

Enterobacteria_phage(66.67%)

integrase

attL 3213689:3213702|attR 3216140:3216153

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000614033.1\|3208620_3209076_+	DUF2824 family protein	A5VW67	Enterobacteria_phage	6.7e-87	99.3
WP_089623926.1\|3211478_3212810_-	hypothetical protein	U5P0I5	Shigella_phage	2.1e-64	36.9
WP_089623927.1\|3212806_3213727_-	glycosyltransferase family 2 protein	M1FQW5	Enterobacteria_phage	3.8e-161	90.2
3213689:3213702	attL	NA	NA	NA	NA
WP_000915536.1\|3213723_3214086_-	GtrA family protein	U5P0S6	Shigella_phage	4.1e-55	91.7
WP_000958665.1\|3214238_3215396_-\|integrase	prophage integrase IntS	A5VW56	Enterobacteria_phage	3.7e-222	99.2
WP_000368131.1\|3215707_3216640_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
3216140:3216153	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3460421 : 3469863

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569357.1\|3460421_3461348_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8
WP_000783120.1\|3461352_3462084_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|3462064_3462172_-	protein YohO	NA	NA	NA	NA
WP_069357594.1\|3462231_3462963_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	3.7e-111	99.0
WP_001295431.1\|3463184_3464870_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_000598641.1\|3464866_3465586_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_089623786.1\|3465632_3466103_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.2e-82	99.4
WP_001296231.1\|3466143_3466605_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001400642.1\|3466729_3468730_-	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.7
WP_001292770.1\|3468726_3469863_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	8.5e-163	97.7

DBSCAN-SWA_9

3560918 : 3567229

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001515525.1\|3560918_3562313_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.7e-19	31.9
WP_000183060.1\|3562487_3563381_+	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_001515524.1\|3563752_3564838_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.3e-101	54.2
WP_001515523.1\|3564837_3565737_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.2e-28	34.5
WP_001515522.1\|3565794_3566673_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.3e-105	63.4
WP_001515521.1\|3566677_3567229_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.8e-49	57.3

DBSCAN-SWA_10

4289998 : 4306273

Escherichia_phage(33.33%)

lysis,transposase,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000837924.1\|4289998_4291132_+	porin OmpN	Q1MVN1	Enterobacteria_phage	8.3e-118	58.8
WP_001295593.1\|4291272_4291707_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
WP_001157925.1\|4291971_4292145_-	hypothetical protein	NA	NA	NA	NA
WP_120795384.1\|4292484_4292598_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|4292666_4292900_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000086527.1\|4293216_4293807_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_089624087.1\|4293904_4294555_-	hypothetical protein	A0A1B1P9C9	Acinetobacter_phage	8.2e-54	69.9
WP_089624085.1\|4294580_4295675_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	2.0e-113	80.5
WP_089624086.1\|4295678_4295888_-	hypothetical protein	NA	NA	NA	NA
WP_053287080.1\|4295865_4296798_-	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	2.4e-83	54.9
WP_085947771.1\|4297236_4298398_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
WP_107317027.1\|4298426_4298840_-	ParB N-terminal domain-containing protein	A0A2I7RQE2	Vibrio_phage	7.8e-34	53.5
WP_001097894.1\|4298977_4300435_-	potassium transporter TrkG	NA	NA	NA	NA
WP_001228696.1\|4300631_4300817_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.8e-15	98.2
WP_016261931.1\|4301033_4301531_-	lysozyme	M1FJA0	Enterobacteria_phage	1.6e-89	96.4
WP_000839565.1\|4301530_4301746_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.3e-32	94.4
WP_001348108.1\|4301997_4302372_-	hypothetical protein	NA	NA	NA	NA
WP_000506936.1\|4302543_4302972_-	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_040062257.1\|4304015_4304558_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	8.3e-76	75.1
WP_040062258.1\|4304554_4304845_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	5.3e-45	86.5
WP_040062259.1\|4304844_4305444_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	2.5e-105	91.5
WP_032291366.1\|4305908_4306121_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.3e-13	67.7
WP_122083109.1\|4306165_4306273_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	3.8e-09	100.0

DBSCAN-SWA_11

4311037 : 4329339

Escherichia_phage(55.56%)

tRNA,integrase

attL 4312374:4312387|attR 4326762:4326775

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001676522.1\|4311037_4313035_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	3.3e-21	26.2
4312374:4312387	attL	NA	NA	NA	NA
WP_001151151.1\|4313375_4313798_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.8e-63	88.5
WP_001262352.1\|4313838_4314909_-	hypothetical protein	A0A088CD36	Shigella_phage	4.7e-62	64.6
WP_000693836.1\|4314980_4315406_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000391949.1\|4315389_4315671_-	hypothetical protein	K7PHA1	Enterobacteria_phage	8.5e-24	72.6
WP_000362155.1\|4315771_4316191_+	hypothetical protein	K7PK07	Enterobacteria_phage	8.8e-25	65.1
WP_001169151.1\|4316590_4316746_+	YdaF family protein	M4QQ57	Salicola_phage	6.1e-08	55.3
WP_001312793.1\|4316742_4317231_-	superinfection exclusion protein B	NA	NA	NA	NA
WP_000560225.1\|4317672_4317894_+	killing protein KilR	A0A0U2RTC4	Escherichia_phage	4.9e-35	97.3
WP_001352098.1\|4317893_4318064_+	conserved protein, Rac prophage	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
WP_000632297.1\|4318138_4318414_+	protein RacC	A0A0U2QW85	Escherichia_phage	1.4e-42	96.7
WP_000105089.1\|4318515_4321116_+	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	1.5e-247	63.4
WP_089623960.1\|4321108_4321918_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.2e-105	71.5
WP_001317028.1\|4321974_4322169_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	5.8e-32	96.9
WP_001383994.1\|4322161_4322350_+	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	1.9e-27	100.0
WP_000079604.1\|4322449_4322665_+	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_000040842.1\|4322666_4323902_+\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	2.8e-236	97.8
WP_001157377.1\|4323953_4324889_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	2.8e-148	100.0
WP_000123745.1\|4325017_4326391_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_000387388.1\|4326868_4327852_-	zinc transporter ZntB	NA	NA	NA	NA
4326762:4326775	attR	NA	NA	NA	NA
WP_000628058.1\|4328106_4329339_+	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5

DBSCAN-SWA_12

4697864 : 4774447

Escherichia_phage(39.13%)

protease,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000156518.1\|4697864_4699625_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000227927.1\|4699693_4700212_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_000828648.1\|4700281_4700449_-	ribosome modulation factor	NA	NA	NA	NA
WP_000759120.1\|4700704_4701268_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_000445533.1\|4701264_4702905_-	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000333176.1\|4702909_4704163_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000053089.1\|4704292_4706200_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.4e-53	29.7
WP_001086517.1\|4706210_4708319_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000224273.1\|4708562_4709672_+	6-N-hydroxylaminopurine resistance protein YcbX	NA	NA	NA	NA
WP_001295353.1\|4709668_4710211_-	cell division protein ZapC	NA	NA	NA	NA
WP_001295352.1\|4710384_4711395_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_032083906.1\|4711505_4712216_-	fimbrial chaperone	NA	NA	NA	NA
WP_000919497.1\|4712208_4712724_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_000730614.1\|4712731_4713274_-	fimbrial protein	NA	NA	NA	NA
WP_001165668.1\|4713285_4714356_-	fimbrial protein	NA	NA	NA	NA
WP_001402987.1\|4714346_4716947_-	fimbrial biogenesis usher protein	NA	NA	NA	NA
WP_107317033.1\|4716971_4717673_-	molecular chaperone	NA	NA	NA	NA
WP_000750304.1\|4717755_4718295_-	fimbrial protein	NA	NA	NA	NA
WP_001263933.1\|4718650_4719226_+	NADPH-dependent FMN reductase	NA	NA	NA	NA
WP_001244308.1\|4719218_4720178_+	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000056006.1\|4720174_4721320_+	FMNH2-dependent alkanesulfonate monooxygenase	NA	NA	NA	NA
WP_089623821.1\|4721330_4722122_+	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA
WP_001090506.1\|4722118_4722886_+	aliphatic sulfonates ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.7e-30	38.0
WP_000193841.1\|4722928_4725541_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	7.0e-19	22.8
WP_001297200.1\|4725806_4727009_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_000117881.1\|4727177_4728578_+\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	5.3e-82	36.1
WP_000977907.1\|4729179_4730268_+	porin OmpF	Q1MVN1	Enterobacteria_phage	2.8e-99	54.5
WP_000462687.1\|4730452_4731643_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_001109487.1\|4731864_4732512_-	hydroxyacylglutathione hydrolase GloC	NA	NA	NA	NA
WP_001295932.1\|4732538_4733087_-	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	7.0e-06	33.7
WP_089623820.1\|4733267_4735115_-	L,D-transpeptidase	NA	NA	NA	NA
WP_000572670.1\|4735375_4739836_-	chromosome partition protein MukB	NA	NA	NA	NA
WP_001295347.1\|4739835_4740540_-	chromosome partition protein MukE	NA	NA	NA	NA
WP_001288850.1\|4740520_4741843_-	chromosome partition protein MukF	NA	NA	NA	NA
WP_001298300.1\|4741839_4742625_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_000899600.1\|4742760_4743540_+	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_000436922.1\|4743516_4744410_-	YcbJ family phosphotransferase	NA	NA	NA	NA
WP_000011603.1\|4744563_4745310_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_000350058.1\|4745306_4745489_-	protein YcaR	NA	NA	NA	NA
WP_000056538.1\|4745540_4746773_-	winged helix DNA-binding protein YcaQ	NA	NA	NA	NA
WP_000570540.1\|4746809_4747796_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_000551270.1\|4747792_4749541_-	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	2.5e-57	29.8
WP_000705764.1\|4749577_4751842_-	ComEC family protein	NA	NA	NA	NA
WP_000167336.1\|4752049_4752334_-	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
WP_000140327.1\|4752493_4754167_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_000125016.1\|4754277_4754961_-	(d)CMP kinase	NA	NA	NA	NA
WP_001295345.1\|4755133_4755898_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_000445249.1\|4756066_4757350_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_000057149.1\|4757420_4758509_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	3.5e-81	46.8
WP_000642849.1\|4758707_4759400_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_001295344.1\|4759529_4761290_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_000642546.1\|4761695_4762553_+	formate transporter FocA	NA	NA	NA	NA
WP_001292822.1\|4762607_4764890_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-162	41.5
WP_000468308.1\|4765208_4765427_-	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_000882975.1\|4765508_4766672_-	phage late control D family protein	U5N3V4	Enterobacteria_phage	3.7e-206	99.7
WP_107317034.1\|4766671_4767151_-\|tail	phage tail protein	M1TAU1	Escherichia_phage	7.3e-84	98.1
WP_107317035.1\|4767165_4769613_-\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	0.0e+00	96.2
WP_000785970.1\|4769605_4769725_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001031303.1\|4769757_4770033_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_001251408.1\|4770090_4770609_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_033811997.1\|4770621_4771812_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.8e-224	99.5
WP_057696600.1\|4771871_4772465_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	1.6e-104	98.0
WP_107317036.1\|4772495_4773065_+\|tail	phage tail protein	K7PH60	Enterobacterial_phage	2.1e-45	58.7
WP_000613358.1\|4773064_4773658_+\|tail	tail assembly protein	Q9MCR5	Enterobacteria_phage	2.7e-59	64.4
WP_000978831.1\|4773629_4774073_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	3.3e-46	62.4
WP_096976489.1\|4774072_4774447_-\|tail	phage tail protein	A0A0F7LBW5	Escherichia_phage	4.8e-14	49.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019961

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection