CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019966	Rhodopseudomonas palustris strain PS3 chromosome, complete genome	1 crisprs	RT,csa3,DinG,WYL	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019966_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019966_1

3175919-3176019

Orphan

Consensus_repeat	Method
CGTCTTCATCAACGGCAAGCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019966_1

>merge|NZ_CP019966|1|3175919-3176019|CRISPRCasFinder
CGTGATAGTCGGCGGCAAGCCGGCAGCCCGCGCCGGCGACACCACCAGCGACGGCGCTATCGTCGAAGGCTCAAACAACGTCTTCATCAACGGCAAGCCGG

>NZ_CP019966|1|1|3175919-3176019|CRISPRCasFinder
CGTGATAGTCGGCGGCAAGCCGG	CAGCCCGCGCCGGCGACACCACCAGCGACGGCGCTATCGTCGAAGGCTCAAACAA
CGTCTTCATCAACGGCAAGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019966.1\|WP_107344781.1\|3170708_3171935_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP019966.1\|WP_107344783.1\|3173776_3174103_-\|NIPSNAP-family-protein	unknown	unknown	gnl\|CDD\|311781
NZ_CP019966.1\|WP_107344791.1\|3182292_3184194_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|372652
NZ_CP019966.1\|WP_107344780.1\|3168546_3170712_+\|glucans-biosynthesis-glucosyltransferase-MdoH	unknown	unknown	gnl\|CDD\|235476
NZ_CP019966.1\|WP_107344794.1\|3186461_3186983_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP019966.1\|WP_107346616.1\|3174773_3175631_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019966.1\|WP_107344790.1\|3181258_3182035_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_CP019966.1\|WP_107344793.1\|3185393_3186215_+\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NZ_CP019966.1\|WP_107344787.1\|3176241_3178866_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_CP019966.1\|WP_107344788.1\|3178879_3180511_-\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
NZ_CP019966.1\|WP_107344789.1\|3180678_3181083_-\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|235881
NZ_CP019966.1\|WP_107344795.1\|3187020_3189576_+\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_CP019966.1\|WP_107344785.1\|3174454_3174739_+\|BrnA-antitoxin-family-protein	unknown	unknown	gnl\|CDD\|373040
NZ_CP019966.1\|WP_107344784.1\|3174213_3174465_+\|BrnT-family-toxin	unknown	unknown	gnl\|CDD\|367913
NZ_CP019966.1\|WP_107344779.1\|3167053_3168559_+\|glucan-biosynthesis-protein-G	unknown	unknown	gnl\|CDD\|237328
NZ_CP019966.1\|WP_107344778.1\|3166473_3166818_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019966.1\|WP_107344796.1\|3189703_3190180_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019966.1\|WP_107344792.1\|3184230_3185247_+\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
NZ_CP019966.1\|WP_107346615.1\|3172794_3173664_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|379203
NZ_CP019966.1\|WP_107344782.1\|3171934_3172798_-\|3-deoxy-8-phosphooctulonate-synthase	unknown	unknown	gnl\|CDD\|235363

Protein	Function_ID	Function_description	E-value
NZ_CP019966.1\|WP_107344781.1\|3170708_3171935_-\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.81954e-52
NZ_CP019966.1\|WP_107344783.1\|3173776_3174103_-\|NIPSNAP-family-protein	gnl\|CDD\|311781	pfam07978, NIPSNAP, NIPSNAP. Members of this family include many hypothetical proteins. It also includes members of the NIPSNAP family which have putative roles in vesicular transport. This domain is often found in duplicate.	7.41786e-35
NZ_CP019966.1\|WP_107344791.1\|3182292_3184194_+\|peptidylprolyl-isomerase	gnl\|CDD\|372652	pfam13624, SurA_N_3, SurA N-terminal domain. This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.	1.318e-40
NZ_CP019966.1\|WP_107344780.1\|3168546_3170712_+\|glucans-biosynthesis-glucosyltransferase-MdoH	gnl\|CDD\|235476	PRK05454, PRK05454, glucans biosynthesis glucosyltransferase MdoH.	0
NZ_CP019966.1\|WP_107344792.1\|3184230_3185247_+\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	0
NZ_CP019966.1\|WP_107344790.1\|3181258_3182035_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	5.33439e-124
NZ_CP019966.1\|WP_107344793.1\|3185393_3186215_+\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	6.09093e-151
NZ_CP019966.1\|WP_107344787.1\|3176241_3178866_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.33414e-47
NZ_CP019966.1\|WP_107344788.1\|3178879_3180511_-\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP019966.1\|WP_107344794.1\|3186461_3186983_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	4.85068e-92
NZ_CP019966.1\|WP_107344795.1\|3187020_3189576_+\|cation-translocating-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_CP019966.1\|WP_107344785.1\|3174454_3174739_+\|BrnA-antitoxin-family-protein	gnl\|CDD\|373040	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	1.83037e-19
NZ_CP019966.1\|WP_107344784.1\|3174213_3174465_+\|BrnT-family-toxin	gnl\|CDD\|367913	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system. BrnT is a ribonuclease toxin of a type II toxin-antitoxin system that exhibits a RelE-like fold. The antitoxin that neutralizes this toxin is pfam14384. BrnT is found in bacteria, archaea, bacteriophage, and plasmids. BrnT-BrnA forms a 2:2 tetrameric complex and autoregulates its own expression, which is induced by a number of different environmental stresses. Expression of BrnT alone results in cessation of bacterial growth which can be rescued after subsequent expression of BrnA.	4.24455e-18
NZ_CP019966.1\|WP_107344789.1\|3180678_3181083_-\|preprotein-translocase-subunit-SecG	gnl\|CDD\|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	6.06993e-22
NZ_CP019966.1\|WP_107344779.1\|3167053_3168559_+\|glucan-biosynthesis-protein-G	gnl\|CDD\|237328	PRK13274, mdoG, glucan biosynthesis protein G; Provisional.	0
NZ_CP019966.1\|WP_107346615.1\|3172794_3173664_-\|VOC-family-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	1.93702e-31
NZ_CP019966.1\|WP_107344782.1\|3171934_3172798_-\|3-deoxy-8-phosphooctulonate-synthase	gnl\|CDD\|235363	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional.	0

>NZ_CP019966.1|WP_107346616.1|3174773_3175631_-|hypothetical-protein
MTPSVNLYAWAIPAWSSESPVDHTWVTSYDNQVHPYSTIADVVVAGQSFWYCWGPFHPQGGTPINPTGALGQQSGNLKLAQCLVQPNADSNTTAAARGTIYTYGVDGVCHQLANQVLYATANGSVPPLTVSKARGYPLSSFIYGTYGLQHTAWAAKVASCSGAQLVARLARPGGLTVVAGGEGIAVDEFERRATEVLATEPAKLASLLRLRGEVQRFAAQPWPGTGQPSAEALNARNQHLIDEAAKLLGPEHFRKLFGAEPGAKVTLVDPRTAATAGEIPPPKPR
>NZ_CP019966.1|WP_107344785.1|3174454_3174739_+|BrnA-antitoxin-family-protein
MPRKRSEPVFDEDNPEWTAEDFANATPVNIMAKDLTSEFLAKIPGRRGPQKAPTKVPVSIRLSADVVEHYKATGPGWQSRIDETLRKAAKLKAG
>NZ_CP019966.1|WP_107344784.1|3174213_3174465_+|BrnT-family-toxin
MSDFDPAKDAINRAKHGISLARWVDLRVRSIIRDGRFDYGEDRFRAYGYIDGLAYCLVFTYRDRLRPISLRRAHDKEMRRHAP
>NZ_CP019966.1|WP_107344783.1|3173776_3174103_-|NIPSNAP-family-protein
MIYESRVYRCVPGKLPAILKRFETITLKLFEKHGIRQAGFFTTLVGASNQELTYLLAWESLAEREQKWTAFATDPEWLAAKAETEKDGQIVDSITNQLLVPTAFSALK
>NZ_CP019966.1|WP_107346615.1|3172794_3173664_-|VOC-family-protein
MSNGFDHIVHTVRDLDAAADLYRRLGFIVGARNVHPWGTHNRIVQFDRFFIELLTIGEPDKIPPHRDGAFSFGAFQRDYLAVREGLSMLLLASDDAAADLRRFTDSGIAAGEVFTFGREGRRPDGSVVKLQFSLAFARDALSPQAGFATCQHHYPENFWNPAFQAHANGARAAAAVVMVADNPTDHHIFLEAFTGSRDLRSTSIGVTAPTKRGEIDIVEPVSLRDQYGITVPSEGEGASFVGLRIAADDLGVVERLLQDHKIPAARHVGRLVVPNVCGATLIFEQGTVR
>NZ_CP019966.1|WP_107344782.1|3171934_3172798_-|3-deoxy-8-phosphooctulonate-synthase
MNKSIAPATSVVAGNVKFGNALPLSIIAGPCQLESRAHALEVASALKEIATRLGIGLVYKTSFDKANRTSAASARGLGLDAALPIFAEIRESLGMPVLTDVHENEQCARAAEAVDILQIPAFLCRQTDLLLAAAATGKIVNVKKGQFLAPWDMGNVVSKITYAGNTKVLVTERGVSFGYNTLVSDMRALPIMAKTTGAPVIFDATHSVQQPGGKGTSSGGEREYVPVLARAAVAVGVAGVFIETHPDPDHAPSDGPNMVPLREFEALIKTLMEFDALAKKRPAVGAV
>NZ_CP019966.1|WP_107344781.1|3170708_3171935_-|MFS-transporter
MPSAGGAASSSRLPPALNIIALSSFAASLSTRALDPVLPRIAEEFSVTITTAAGLAAVTAFTFAVVQPAIGALGDLFGKARLMIVCLALLGFASLLGALSSSFTVLFVCRILAGIGSGGVFPVALGLASDLVTVDRRQVAIGRVLGGSMAGNLLGASASGVIGDFLGWRGVLAILGVLVIVAAIAVAFGARGAKMPPRSAEMDLPALRRGYRTIFSNPNAAICFTAVLIEGTCVMGVFPYVAAFLHEQGEQSLAIAGLVIAGFAIGGLIYTLTVSQLLPRLRTTGMMIGGGLLVALQLAAIMLGPHWQAQMFAFVLMGMGFYMLHGCIQVFASELTETARGTAMSLHSFFFFIGQTTGPIAYGFGLSHLGKTATLTPTALTMASLGIVLARILKPRPPADAVARELPL
>NZ_CP019966.1|WP_107344780.1|3168546_3170712_+|glucans-biosynthesis-glucosyltransferase-MdoH
MDAVIGPRREGYSDTSRRAEPLPANAPLPMPVQSLLQSPRAAAVRSPAAWRRVLIMVATAVLSAAGIYEMYQVLQVGGITVLEGVVLVLFAALFAWVALSFVSALAGFTVLCCGWRDDIGIMADGSVPAVSSRIAMLLPTYNEDAPVVFARLQATRQSVDETGRGAQFDWFVLSDSTDPSVWIDEERCYAELAATHDRLYYRHRPHNTARKSGNIADWVERFGGAYDFMVILDADSVMTGDVLVRIAAAMEANSDVGLIQTLPVVVQARTLFARVQQFAGSIYGPMIAAGTAWWHGSESNYWGHNAIIRVSAFAGSAGLPTLAGRKPFGGEILSHDFVEAALMRRAGWRIHLAPTLRGSYEECPPSLLDFAARDRRWCQGNLQHGKLLTARGLHWVSRLHFLTGIGAYLTAPMWLAFLIAGILISLQAQFVRPEYFPKDFSLFPIWPAQDPVRAAWVFAGTMGLLILPKLLALWLVLMRNETRRKFGGGLRAFGGLLLETLISALNAPVMMVFQSTAVIEILLGRDAGWQVQHRGDGAIPLLEVVRRYALPTALGATMAIGAWLVSWPLLLWMTPVIVGLLLAIPVALLTTRVSRSRPLLMTTPEQIDPPAILAQVHALADRLCQANQTTDPLSALCSDRRLRELHLAALAFHPPRPRGRIDPHLATARVLIDDAESYSEAAGWLDPREIRAVLGDRETLQGLLALPGGDGPGPIATESRG
>NZ_CP019966.1|WP_107344779.1|3167053_3168559_+|glucan-biosynthesis-protein-G
MNRRQVLTGLAALPLLQAKPDPAAADRSSSIDFDPWMVRKLARELASKPYEAPDGSLPASLNDLSYDAYRSLRFRPERALWRAENLPFQVQFFHRGFLYKNRVTIFEVADGKARHVPYRADDFSFGDVAPPPDADLGFAGFRIHAPLQRADYYDEVSAFLGAAYFRAVTKGERYGLSARGLSIDTGQSSGEEFPLFKTFWLERPAPGASSLVVHALLDSKSVAGAYRFTIRPGDTTVFDVEMALYPRVDLQHAGLAPMTSMFLFGPNDPADTPDFRAAVHDSDGLAIFNGSGEELWRPLCNPKDLQISSFSDRNPRGFGLMQRERSFANYQDLESRYELRPSLWAEPIGDWTDGAVKLIEIPTREEVHDNIAAFWEPKQPLRAKGEHIYTYRLHWGPDAPKPKALARFVRTGVSARGDTERLFVLDFAGERLKTVDAAAIRGVVTADKGEIRNIVTQPNPAMGGWRLSFDLAQARAPVELRAVVCEGDAAVSEVWLYRWTP
>NZ_CP019966.1|WP_107344778.1|3166473_3166818_+|hypothetical-protein
MNDLYSWTAHQHHGLHTFKSFQDKLEQFAEDHPAQRGLCRVLSHLVQDYIEAFDEAPLPADLARDVHHRLLQLLASLELHGDSERRLADINRVAGFALWPMPQSPSGGEHRPHH
>NZ_CP019966.1|WP_107344787.1|3176241_3178866_+|CHAT-domain-containing-protein
MLVPTFAAQAQAQQRGAPTERELVAKINDAFRSLQAGDRDGGRQRLTAALRAVRDSSYHPLTIQAYLSAATLFERRRDTAIASELFAEAANTRAARETSPEATTLWFEYARFLERTVQYERGIPVAVEASKRMRAIYGPNSAQDIAGRDILATLLTDNGAVAAGLNLSEETYLGARKALGDNEPLTWRTENNYAEALRMVGHPDLAAKIDAPLLKKSIAHYGVGSIQALVSASNLALDHLAMGNEAETMQALALQKRCAAELADPTSEHVAQADTWIAYAKAYFHPDRALSTAELEAMARVKDWNGAPDLLRIKSAQLAADHYERRGDSARALALRLDAYHRSQETIARQHPITFDALLGVAVTRLKRGDPDALATFKDVEQQSFNWMLREVGTAGNRYVAETMRKLADDILYEYGRYALIDPTAAVAYADAVSRWKTMEDGERTLLRLTLDRLPDEPTRELARAVLRLSGQQQEMLSSGKLDDDARDVLKRLQEARHQLAARAGTRPPADVQLPSVADKLGATDALVDFFVSGRGSRVNPAEPKPAARLQAVIHRHGKPPQVIDLGPLDGFTAPSVADADRTQPFRRLYATLIGPLKPLLAGVTRLFLVPDADLYSLPFAMLQDGNGRHLDEIYDTRFLTRADAIVFAEQDDKLIAESKAVLVGGLDYAGAASQLPSTKTEIERIAPDLQRRDIASTTMTGNAGEASIRSKAEGATLLHLATHGFYKAATDRTDALWRSGLVAARPLLDRPPRHDGDDGVIYARELMDWNLSAADLVVLSACQTALGDPSRIGSVRGLPTALAIAGARRSLLTLWEVSDEGTANFMARLYQVLADDNLDYASALRKVRIEAIHGKIKAAEDPSVWAAFVLFEN
>NZ_CP019966.1|WP_107344788.1|3178879_3180511_-|CTP-synthase
MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGRPATKQDNITTGRIYQDILTKERRGDYLGATIQVVPHVTNAIKEFIVSDNDGYDFVLVEIGGTVGDIEGLPFFEAIRQIKNDLPRGDVIYIHLTLLPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDREIPKEERRKLGLFCNVRESAVIEARDVDNIYAVPEAYHAAGLDDEVLAAFAIAAKEPPQLARWHEINERIRNPEGAVTIAIVGKYTGMKDAYKSLIEALSHGGIANKVQVKLDWIESEVFENEDPAPFLEHVNGILVPGGFGQRGAEGKIEAARFARERNVPYFGICFGMQMAVIEAARNLAGIEQANSTEFGPTPEPLVGLMTEWVRGNELEKRNQAGDLGGTMRLGAYPASLKRGSRVSQVYGGATEISERHRHRYEVNTAYKDRLEQHGLKFSGMSPDGVLPEIVEYEDHPWFIGVQFHPELKSRPFDPHPLFASFVQAALVQSRLV
>NZ_CP019966.1|WP_107344789.1|3180678_3181083_-|preprotein-translocase-subunit-SecG
MQTVIIVIHLMFVLGLIGVVLLQKSEGGGLGVGGGGGFMSSRGTANLLTRTTAILAAGFFATSLLLTWLASYNRKPTTILPTAAPIQQQAPGQPAPPLSQGGGLLDTLKQTDQQQNQQPAAPAAPAAPTPPQSQ
>NZ_CP019966.1|WP_107344790.1|3181258_3182035_-|triose-phosphate-isomerase
MPVPAVRPLIAGNWKMNGLKDSVAELDAMLKGAAELPQGIDLLVCPPATLVASFAARVAEAHAGKALPFSIGGQDCHANASGAHTGDIAAEMLADAGAAAIIVGHSERRADHAENDAIVRAKAQAVWRAGLVAIVCVGETQGERDAGHTLDVVAGMLAGSLPDGATAANLVVAYEPVWAIGTGRTPTAADVEEVHGFIRKTLSDRFGAAGETMRILYGGSVKPSNARELLAVPHVNGALIGGASLKASDFLAIAAGCP
>NZ_CP019966.1|WP_107344791.1|3182292_3184194_+|peptidylprolyl-isomerase
MLRGMRKASSNWIGKTIMTIVMGVLIVSFGVWGIADVFRGFGRSTLAKIGSTEISTEQFRQTYNDRLQQIGRQFGRPLTPDQARAIGIDRQVLQQTIAEAALDEDARRLGLGQSDADTMKSILEDPNFKGANGQFDANRFQQLIRQFGFTEQRYLAEQRRVALRRQIAGSLTAGLEPPKTLMQALSQFQNEERAIDYLKLTDAQAGTIPAPSPADLTAFYDSHKAQFRAPEYRKISFLVVTPESIAKWAEVSDADAQKLFEQRKDKLSTPEKRQILQIVFPNVEEAQAARAKIASGTSFADLAKERGVKPADLDLGLVSQSEMLDQKVAAAAFALPLNEVSQPVQGQFGTVLLEITKIEPGKQPDYASVAASLKRDLAQERARKQVQELHDKMEDARGGGASVVDAAKQLGLTAVTIDAIDRAGRGPDGAPVAAIPQGLELANAAFNSEPGVDNDAISFQNGYVWYDILGITPSHERPLDEVKDKVEAGWRAEQVTEKLRKLAAELVQKLQGGAKLAEVAPAGVTVQTASGIKREGADAGLPNTVVDAVFRTAKDGAGQVQGGSATEWYVFRVTGDTVPTADLNAPQMQQLKDNLVQRLRDEQVGEYIAWLEKDIGTKVNQEAVAQATGAATN
>NZ_CP019966.1|WP_107344792.1|3184230_3185247_+|anthranilate-phosphoribosyltransferase
MVDFKSIIAKVATGATLTRDEATDAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRSKMLPVSAPADAEDIVGTGGDGSGSVNVSTCASFVVAGCGVTVAKHGNRALSSKSGAADVLAALGVKIDIPPEQVGRCVNEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLKNLGAEAVWVVHGSDGLDEITLSGTTAVAQLKNGEITSFEISPEDAGLPRAPADALKGGDAQANAVALRAVLEGMPGPYRDVALLNAAATLVVAGKAKDLKEGVALGTQSIDSGAAEARLKKLIAVSAAA
>NZ_CP019966.1|WP_107344793.1|3185393_3186215_+|indole-3-glycerol-phosphate-synthase-TrpC
MSDILTKIEAYKREEIAAAKRERPLAAIEAIAREASPPRGFVKALRAKHAAGDYGLIAEIKKASPSKGLIRADFDPPALARAYKAGGAACLSVLTDTPSFQGSLDYLVAARAAVSLPALRKDFMYDTYQVVEARAHGADCILIIMAALDDAAAKDIEDAAFDLGMDVLLEVHNAPELERALKLRSPMVGVNNRNLRTFEVTLATSEALAPLIPNDRLMVGESGIFTPADLARLAHVGMSTFLVGESLMRQPDVTAATRALLTRQTTPQQTGTN
>NZ_CP019966.1|WP_107344794.1|3186461_3186983_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MAKKSTTRAATTPALTHIGASGEARMVDVSEKPATERVAVAEGRVVMKKATLELILSGDAKKGDVLGTARVAGIMAAKRTAELIPLCHPLALSKVTLDITPDAKLPGCIVRATVKVTGPTGVEMEALTAVSVACLTIYDMIKAAERGVRIEAIHLIAKTGGKSGDYVASARRK
>NZ_CP019966.1|WP_107344795.1|3187020_3189576_+|cation-translocating-P-type-ATPase
MPDLASPSDSISGLSEREAAERLASEGYNELPSPDRRTLLGIVFEVVREPMLALLLGGGVVYMALGDLKEAIILLIFATLSVVITVVQEARTERVLETLRDLTSPRALVIRDGVRKRIAGREVARGDVIVLSEGDRIAAEAVLLQADDLLVDESLLTGESVPVRKLSRDEADTTASHRPGGDDQPNVYSGSLVVRGGGLAEVTATGARSEIGKIGQALGSMQTEAPRLQQQTRALVRTFGIIAAAFTALVVILYGALRDGWLDAVLAGITVGMSMLPEEFPVVLTVFMAMGAWRISQARVLTRRAAAIEALGSATVLCTDKTGTLTENRMSVAELRLPSGEVFRPREDGALPQGFAPLLETGLLAAAPDPFDPMDLALHRLAGDHLPNGNGARSLVHAYGLRRDLLAITQVWRDPDDVSNYVVAAKGAPEAIARMCGLDAAALGNVSRTVDAMAAEGLRVLGVARASHPDEDWPETQLGFRFDFLGLVGLADPLRASVPAAVADCRAAGIRVVMITGDYPATAQEIARQAGIDADSCVTGEEIATLDDAALAERLRRATVFARIMPEQKLRIVEALKADGEVVAMTGDGVNDAPSLKAAHIGIAMGGRGTDVAREASAIVLLDDDFASIVKAIRLGRRIYDNLVKAMGFIFAVHVPIAGLALLPLLFGLPILLGPIHIAFLEMIIDPVCSIVFEAETAEDDAMRRPPRDPEQPLFSRALIVWGMLQGLLVFVLVAGVFVIGQMRAMPDTELRALTFFALVLSFVGLIFVNRSFSASLLTALRRPNAMLAGMLGIVAVVLIASLAWPWLRDLFRFGPLHPDDLGLTAAAALVVLIVLELVKPLWRKMMRQPG
>NZ_CP019966.1|WP_107344796.1|3189703_3190180_-|hypothetical-protein
MRSTNFEHSYAPGAASVTTLRPSATVYDHPDQVLRDDALCTAEKRAILSSWASDANAVEQQPWLRLAPGHRNPVPLRAILDALQRLDDDDPPPKGGASIRLSGDRAAQHDPSDDYRPSWRRHYGLAPRINQFRPVPLSGVRRDHAARARRATTGRTQG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2061235 : 2076898

Geobacillus_phage(25.0%)

protease,capsid,head,tail,portal

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_107343849.1\|2061235_2062411_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	9.0e-75	42.0
WP_107343850.1\|2062527_2063121_+	hypothetical protein	NA	NA	NA	NA
WP_107343851.1\|2063208_2063406_+	hypothetical protein	NA	NA	NA	NA
WP_107343852.1\|2063413_2063593_+	hypothetical protein	NA	NA	NA	NA
WP_107343853.1\|2063679_2064426_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.5e-30	49.0
WP_107346530.1\|2064560_2065814_+\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	3.4e-72	39.6
WP_159060661.1\|2066128_2066446_+	hypothetical protein	NA	NA	NA	NA
WP_107343855.1\|2066433_2066661_+	addiction module toxin, HicA family	NA	NA	NA	NA
WP_159060662.1\|2067258_2067918_+	hypothetical protein	NA	NA	NA	NA
WP_107343857.1\|2068120_2070691_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_107343858.1\|2071113_2072070_+	hypothetical protein	NA	NA	NA	NA
WP_107346531.1\|2072146_2073307_+	DNA-packaging protein	A0A0U4IJ26	Arthrobacter_phage	2.9e-70	41.0
WP_107343859.1\|2073509_2073803_+	hypothetical protein	NA	NA	NA	NA
WP_107343860.1\|2073886_2074198_-	hypothetical protein	NA	NA	NA	NA
WP_107343861.1\|2074358_2075123_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_107343862.1\|2075187_2075754_+	hypothetical protein	NA	NA	NA	NA
WP_107343863.1\|2075750_2076071_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_107343864.1\|2076067_2076478_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_107343865.1\|2076490_2076898_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA

DBSCAN-SWA_2

2780950 : 2824465

Rhizobium_phage(38.1%)

terminase,integrase,capsid,head,tail,portal

attL 2771093:2771109|attR 2788866:2788882

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2771093:2771109	attL	NA	NA	NA	NA
WP_107344442.1\|2780950_2782162_-\|integrase	tyrosine-type recombinase/integrase	A0A291AUF0	Sinorhizobium_phage	5.6e-64	43.1
WP_107344443.1\|2782158_2782428_-	hypothetical protein	NA	NA	NA	NA
WP_107344444.1\|2782537_2782789_-	hypothetical protein	NA	NA	NA	NA
WP_107344445.1\|2782795_2783266_-	hypothetical protein	NA	NA	NA	NA
WP_107344446.1\|2783255_2783453_-	hypothetical protein	NA	NA	NA	NA
WP_107344447.1\|2783449_2783695_-	hypothetical protein	NA	NA	NA	NA
WP_107344448.1\|2783694_2783967_-	hypothetical protein	NA	NA	NA	NA
WP_159060672.1\|2783966_2784347_-	hypothetical protein	NA	NA	NA	NA
WP_107344450.1\|2784358_2784667_-	hypothetical protein	NA	NA	NA	NA
WP_107344451.1\|2784705_2785197_+	hypothetical protein	NA	NA	NA	NA
WP_107344452.1\|2785212_2785569_+	hypothetical protein	NA	NA	NA	NA
WP_107344453.1\|2785800_2786448_-	hypothetical protein	NA	NA	NA	NA
WP_107344454.1\|2786563_2786887_+	hypothetical protein	NA	NA	NA	NA
WP_107344455.1\|2786898_2787207_-	hypothetical protein	NA	NA	NA	NA
WP_107344456.1\|2787343_2787583_+	hypothetical protein	NA	NA	NA	NA
WP_107344457.1\|2787797_2788118_+	hypothetical protein	H2BD37	Pseudomonas_phage	1.4e-19	53.2
WP_107344458.1\|2788114_2788402_+	hypothetical protein	NA	NA	NA	NA
WP_107344459.1\|2788398_2788578_+	hypothetical protein	NA	NA	NA	NA
WP_107344460.1\|2788564_2788918_+	hypothetical protein	NA	NA	NA	NA
2788866:2788882	attR	NA	NA	NA	NA
WP_107344461.1\|2788917_2789247_+	hypothetical protein	NA	NA	NA	NA
WP_107344462.1\|2789243_2789669_+	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	1.5e-43	54.0
WP_107344463.1\|2789689_2789941_+	hypothetical protein	NA	NA	NA	NA
WP_107344464.1\|2789937_2791068_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	3.7e-33	30.7
WP_107344465.1\|2791079_2791331_+	hypothetical protein	NA	NA	NA	NA
WP_107344466.1\|2791327_2792665_+	hypothetical protein	A0A1V0DX34	Synechococcus_virus	3.6e-27	37.3
WP_159060673.1\|2792645_2793026_+	hypothetical protein	NA	NA	NA	NA
WP_107346587.1\|2793141_2793522_+	hypothetical protein	NA	NA	NA	NA
WP_107344468.1\|2793518_2793785_+	hypothetical protein	NA	NA	NA	NA
WP_107344469.1\|2793781_2794018_+	restriction alleviation protein, Lar family	NA	NA	NA	NA
WP_107344470.1\|2794014_2794293_+	hypothetical protein	NA	NA	NA	NA
WP_159060674.1\|2794355_2795522_+	DNA primase	A0A0A8IL83	Aurantimonas_phage	1.5e-45	38.6
WP_107344472.1\|2795518_2796394_+	DNA adenine methylase	A0A0K1LM14	Caulobacter_phage	7.9e-76	51.6
WP_107344473.1\|2796390_2798754_+	hypothetical protein	G8DGC0	Emiliania_huxleyi_virus	1.1e-50	29.4
WP_107344474.1\|2798787_2799150_+	hypothetical protein	NA	NA	NA	NA
WP_159060675.1\|2799146_2799416_+	hypothetical protein	NA	NA	NA	NA
WP_159060676.1\|2799935_2800646_+	hypothetical protein	NA	NA	NA	NA
WP_159060677.1\|2801243_2801474_+	hypothetical protein	NA	NA	NA	NA
WP_104512776.1\|2801470_2802040_+	hypothetical protein	A0A0A8IL87	Aurantimonas_phage	1.3e-34	51.3
WP_107344478.1\|2802233_2802863_+	hypothetical protein	NA	NA	NA	NA
WP_107344479.1\|2802859_2804974_+\|terminase	terminase	G8DH41	Emiliania_huxleyi_virus	6.7e-97	34.2
WP_159060678.1\|2804970_2805489_+	hypothetical protein	NA	NA	NA	NA
WP_107346588.1\|2805509_2807159_+\|portal	phage portal protein	A0A068CC70	Rhizobium_phage	9.7e-168	56.8
WP_104512780.1\|2807158_2807419_+	hypothetical protein	NA	NA	NA	NA
WP_107344481.1\|2807432_2808356_+	S49 family peptidase	A0A068CE01	Rhizobium_phage	3.0e-94	58.2
WP_159060679.1\|2808472_2808883_+	hypothetical protein	NA	NA	NA	NA
WP_107344483.1\|2808898_2809549_+\|head	head decoration protein	NA	NA	NA	NA
WP_107344484.1\|2809563_2810592_+\|capsid	major capsid protein	A0A0A8ILA9	Aurantimonas_phage	3.7e-141	71.0
WP_107344485.1\|2810702_2811116_+	hypothetical protein	NA	NA	NA	NA
WP_107344486.1\|2811128_2811881_+	hypothetical protein	NA	NA	NA	NA
WP_107344487.1\|2811888_2812113_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_107344488.1\|2812119_2813628_+\|tail	phage tail protein	A0A068CC80	Rhizobium_phage	3.2e-69	36.5
WP_107344489.1\|2813694_2814084_+	hypothetical protein	NA	NA	NA	NA
WP_107344490.1\|2814091_2814505_+	hypothetical protein	NA	NA	NA	NA
WP_107344491.1\|2814632_2816519_+\|tail	phage tail tape measure protein	R9TP54	Rhizobium_phage	2.9e-59	44.5
WP_107344492.1\|2816522_2817740_+	hypothetical protein	A0A068CDD2	Rhizobium_phage	9.8e-16	35.1
WP_107344493.1\|2817744_2818791_+	hypothetical protein	M4M9L5	Vibrio_phage	5.8e-25	26.6
WP_107344494.1\|2818790_2819300_+	hypothetical protein	NA	NA	NA	NA
WP_107344495.1\|2819299_2819893_+	hypothetical protein	A0A068CDD6	Rhizobium_phage	2.9e-29	45.3
WP_107344496.1\|2819892_2821023_+	hypothetical protein	B5TK75	Pseudomonas_phage	1.1e-29	31.3
WP_107344497.1\|2821031_2821649_+	hypothetical protein	NA	NA	NA	NA
WP_107344498.1\|2821641_2823030_+	hypothetical protein	NA	NA	NA	NA
WP_107344499.1\|2823044_2823638_+	DUF4376 domain-containing protein	A0A023NHR7	Nitrincola_phage	7.6e-06	34.1
WP_107344500.1\|2823695_2823968_+	hypothetical protein	NA	NA	NA	NA
WP_107344501.1\|2823964_2824465_+	lysozyme	A0A0K1Y6F2	Rhodobacter_phage	2.1e-20	35.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage