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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP025609 Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome 1 crisprs DEDDh,WYL,cas3,csa3,DinG 0 0 26 0

Results visualization

1. NZ_CP025609
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025609_1 29512-29660 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 7549 : 59766 38 Acidithiobacillus_phage(16.67%) transposase,protease NA
DBSCAN-SWA_2 486729 : 611586 100 Stenotrophomonas_phage(39.22%) transposase,integrase,head,portal,holin,tail,plate,terminase,capsid,tRNA attL 512345:512389|attR 556856:556900
DBSCAN-SWA_3 620889 : 702685 47 Acidithiobacillus_phage(16.67%) protease,transposase NA
DBSCAN-SWA_4 754409 : 824893 55 Ralstonia_phage(20.0%) transposase NA
DBSCAN-SWA_5 1065195 : 1127613 44 Leptospira_phage(16.67%) protease,transposase NA
DBSCAN-SWA_6 1149681 : 1212091 51 Leptospira_phage(18.18%) protease,transposase NA
DBSCAN-SWA_7 1251170 : 1312121 46 Bacillus_phage(15.38%) transposase NA
DBSCAN-SWA_8 1316384 : 1385220 52 Ralstonia_phage(27.27%) transposase,plate NA
DBSCAN-SWA_9 1410655 : 1519008 87 Acidithiobacillus_phage(18.75%) protease,transposase,tRNA NA
DBSCAN-SWA_10 1568760 : 1630516 50 Staphylococcus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_11 1739013 : 1800743 51 Leptospira_phage(14.29%) integrase,transposase,tRNA attL 1739801:1739821|attR 1799903:1799923
DBSCAN-SWA_12 1831919 : 1841807 7 Micromonas_sp._RCC1109_virus(16.67%) tRNA NA
DBSCAN-SWA_13 1968026 : 2049117 48 uncultured_Caudovirales_phage(38.1%) transposase,tRNA NA
DBSCAN-SWA_14 2136150 : 2217462 55 Ralstonia_phage(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_15 2235000 : 2373419 51 Tupanvirus(35.71%) transposase,plate NA
DBSCAN-SWA_16 2598715 : 2700239 60 Ralstonia_phage(18.75%) protease,transposase,tRNA NA
DBSCAN-SWA_17 2899229 : 3043314 103 Ralstonia_phage(12.5%) protease,transposase,coat,tRNA NA
DBSCAN-SWA_18 3537735 : 3558501 15 Ralstonia_phage(60.0%) transposase,tRNA NA
DBSCAN-SWA_19 3646144 : 3706141 45 Ralstonia_phage(25.0%) protease,transposase NA
DBSCAN-SWA_20 3804710 : 3872547 46 Staphylococcus_phage(14.29%) protease,transposase,tRNA NA
DBSCAN-SWA_21 3892346 : 3898716 6 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_22 4088761 : 4226753 120 Xanthomonas_phage(12.82%) integrase,head,portal,protease,tail,terminase,transposase,capsid,tRNA attL 4092828:4092847|attR 4232586:4232605
DBSCAN-SWA_23 4284482 : 4361266 56 Acidithiobacillus_phage(21.43%) transposase NA
DBSCAN-SWA_24 4398433 : 4458422 41 Ralstonia_phage(37.5%) transposase NA
DBSCAN-SWA_25 4469096 : 4548377 50 Acidithiobacillus_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_26 4565840 : 4723380 116 Acidithiobacillus_phage(26.32%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage