CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027103	Escherichia coli strain RM14723 chromosome, complete genome	1 crisprs	DEDDh,cas14j,DinG,cas3,c2c9_V-U4,csa3	0	1	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027103_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027103_1

640140-640279

Orphan

Consensus_repeat	Method
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027103_1

>merge|NZ_CP027103|1|640140-640279|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACAGCCTTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

>NZ_CP027103|1|1|640140-640279|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	GCCTTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGAGTTCAGTGC
TGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027103.1\|WP_000786399.1\|639594_640038_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP027103.1\|WP_001298035.1\|634809_635313_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP027103.1\|WP_001357999.1\|644415_645918_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP027103.1\|WP_000931915.1\|650777_651179_-\|protein-gop	unknown	unknown	unknown
NZ_CP027103.1\|WP_000446132.1\|651589_652162_-\|Polarity-suppression-protein	unknown	unknown	gnl\|CDD\|311413
NZ_CP027103.1\|WP_000002952.1\|634216_634633_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_CP027103.1\|WP_001357996.1\|649707_650775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373022
NZ_CP027103.1\|WP_000428631.1\|629701_630646_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
NZ_CP027103.1\|WP_000635218.1\|632553_633006_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NZ_CP027103.1\|WP_000235828.1\|628686_629691_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
NZ_CP027103.1\|WP_001357997.1\|648885_649680_+\|sce7726-family-protein	unknown	unknown	unknown
NZ_CP027103.1\|WP_000638634.1\|652235_652736_-\|transactivation-protein	unknown	unknown	gnl\|CDD\|137468
NZ_CP027103.1\|WP_001357998.1\|646047_647067_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP027103.1\|WP_001358000.1\|635505_636693_+\|DUF898-family-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP027103.1\|WP_000012936.1\|633050_634055_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP027103.1\|WP_000772677.1\|647510_648779_+\|integrase-arm-type-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
NZ_CP027103.1\|WP_001298046.1\|627226_628630_-\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP027103.1\|WP_000416365.1\|636739_639595_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP027103.1\|WP_001295681.1\|643172_644255_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP027103.1\|WP_000397144.1\|640295_641807_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863

Protein	Function_ID	Function_description	E-value
NZ_CP027103.1\|WP_000786399.1\|639594_640038_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NZ_CP027103.1\|WP_001298035.1\|634809_635313_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.51706e-18
NZ_CP027103.1\|WP_001357999.1\|644415_645918_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP027103.1\|WP_000446132.1\|651589_652162_-\|Polarity-suppression-protein	gnl\|CDD\|311413	pfam07455, Psu, Phage polarity suppression protein (Psu). This family contains a number of phage polarity suppression proteins (Psu) (approximately 190 residues long). The Psu protein of bacteriophage P4 causes suppression of transcriptional polarity in Escherichia coli by overcoming Rho termination factor activity.	5.7343e-53
NZ_CP027103.1\|WP_000002952.1\|634216_634633_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	8.18116e-69
NZ_CP027103.1\|WP_001357996.1\|649707_650775_-\|hypothetical-protein	gnl\|CDD\|373022	pfam14350, Beta_protein, Beta protein. This family includes the beta protein from Bacteriophage T4. Beta protein prevents the gop protein from killing the bacterial host cell.	4.44922e-67
NZ_CP027103.1\|WP_000428631.1\|629701_630646_-\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
NZ_CP027103.1\|WP_000635218.1\|632553_633006_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	1.7147e-64
NZ_CP027103.1\|WP_000235828.1\|628686_629691_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NZ_CP027103.1\|WP_000638634.1\|652235_652736_-\|transactivation-protein	gnl\|CDD\|137468	PRK09678, PRK09678, DNA-binding transcriptional regulator; Provisional.	2.40552e-10
NZ_CP027103.1\|WP_001357998.1\|646047_647067_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	8.15216e-169
NZ_CP027103.1\|WP_001358000.1\|635505_636693_+\|DUF898-family-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	1.1019e-105
NZ_CP027103.1\|WP_000012936.1\|633050_634055_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP027103.1\|WP_000772677.1\|647510_648779_+\|integrase-arm-type-DNA-binding-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	1.27672e-83
NZ_CP027103.1\|WP_001298046.1\|627226_628630_-\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NZ_CP027103.1\|WP_000416365.1\|636739_639595_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP027103.1\|WP_001295681.1\|643172_644255_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP027103.1\|WP_000397144.1\|640295_641807_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0

>NZ_CP027103.1|WP_000786399.1|639594_640038_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP027103.1|WP_000416365.1|636739_639595_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRASAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP027103.1|WP_001358000.1|635505_636693_+|DUF898-family-protein
MNDVNIGKDNSRHSFVFTGKGGEYFLICLVNFLLTIITLGIYGPWALIKCRRYIYQHVTLKGQPFSYKGTGGAIFVSMLLIVVVYLFSISCFAGQHFALGLFLFALLICGIPCMAVKSLQYQANMTSLNDIRFGFNCSMMRAWWVMLGLPVLLALVFWFALYLIAQVTTSIGGLFFNLVALSLLSAIGLGVVHGITYSKWMPLLGNNATFGIHKFSIQVNVKECIKGCMLAILTMVPFIIVIGIMIAPVFQQLIMMSMLGRSDAGSEFVLQYYPQIMASYFLYFVAILVFASYLYVTLRSLFLNNLTLANGTIRFHSSVTAIGMLLRMLAVLMGASITCGLAYPWLKMWMVSWIANNTHVQGDLDSLELTNDDKPQDSGSLMWISRGIMPYVPFI
>NZ_CP027103.1|WP_001298035.1|634809_635313_-|GNAT-family-N-acetyltransferase
MNVVASPALRLRKLTVADNPAIAHVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL
>NZ_CP027103.1|WP_000002952.1|634216_634633_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGIRH
>NZ_CP027103.1|WP_000012936.1|633050_634055_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSKMMALTGNSQVKFLHCLPAFHDEQTTLGKKMAAEFGLYGGMEVTDEVFESPASIVFDQAENRMHTIKAVMVATLAK
>NZ_CP027103.1|WP_000635218.1|632553_633006_+|YhcH/YjgK/YiaL-family-protein
MIVGNIHHLQSWLPEELREAIEYIKSHVSDETAKGKHAIDGDRLFYLISEDTTEPGELRRAEYHARYLDIQIVLKGQEGMTFSTQPASVPETDWLADKDIAFIGQGIDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKLLKA
>NZ_CP027103.1|WP_000428631.1|629701_630646_-|carbamate-kinase
MENKPTLVIALGGNALLKRGEPLEAEIQRKNIDLAAKTIAQLTQHWRVVLVHGNGPQVGLLALQNSAYAHVAPYPLDILGAESQGMIGYMLQQALKNQLPQREISVLLTQVEVDANDPAFSNPTKYIGPIYDHAQTQVLQAEKGWVFKADGHSFRRVVPSPQPKRIVERDAIQTLIAHDHLVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQIHANALLILTDADAVYLDWGKPTQRPLAQVTPELLNEMQFDAGSMGPKVTACAKFVSQCRGIAGIGSLADGPEILAGDKGTLIRLDTPITTLDPFL
>NZ_CP027103.1|WP_000235828.1|628686_629691_-|ornithine-carbamoyltransferase
MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQGAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGEPKEAWAERVSLMAPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTEEVFESAHSIVFDEAENRMHTIKAVMVATLGD
>NZ_CP027103.1|WP_001298046.1|627226_628630_-|YfcC-family-protein
MGKFKFPTAYTILFVLIALVAAMTWIVPAGKYQMVTNAALGKEVPVAGTYAPVEAQPQGITAVLLAPIDGLYNHQTYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTTRLNGREEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVAAATVLLGSGIGTLGSTINPFATVIAANAAGIPFTQGILLRVILLLVGYVICVYWVMRYARKVRNSPESSIVADKMAENQAHFLGNRSETMLEFTPTRKAILILFAASFAFMIYGVAVLGWWMAEISAVFLAAAVIVGVIARMGEETFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAENLVSGLSTTVFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFAHVQRDLVVTAYQSASGVVNLITPTSAVVMGGLAIARVPWVRYLRWVAPLLLILTMLNMIVLSIAAMI
>NZ_CP027103.1|WP_000397144.1|640295_641807_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP027103.1|WP_001295681.1|643172_644255_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP027103.1|WP_001357999.1|644415_645918_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTTSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPTFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NZ_CP027103.1|WP_001357998.1|646047_647067_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKTLAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>NZ_CP027103.1|WP_000772677.1|647510_648779_+|integrase-arm-type-DNA-binding-domain-containing-protein
MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKVVQKEARAENSGAYTFEAIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMMQWWADYLDMNRNKYITPYDYSKYKEILK
>NZ_CP027103.1|WP_001357997.1|648885_649680_+|sce7726-family-protein
MAELLREQEVKIALIEWLYKKGMLSDATIINEMVVANWSRRADLAIANGSLQAFEIKSDFDSLKRLDGQLKIFKSSFEKVTIVCAPKFTSEVSKRVSSDVGVVEFQSNNSSVRFKIIQKGRVCSRLNKFVYLGFLLKSELKDLLNQYGITFSNELHRDCLEVLASKLSLNKIREFVITSIKNRYHATSNDFLSRLHGNQEISINDLALLSKAKRRNNSLVKFEFKACSEKSLNEYHKVDVDSIVRKYGDDVSYIPEKVLKRVVG
>NZ_CP027103.1|WP_001357996.1|649707_650775_-|hypothetical-protein
MKVYFENYSYYPALRTRSAEMTGLNNLSYENKKKILPLISLGKWPRSEEIQVSLDKSLEVMSNLPFILDVTKDNSHHCASSFELLSPENGFKNWIEFCSRNDNIIPVVQMPDSAKLRDISIQARVLEELKGSIAFRIRNLNTDINKTLTSLVSMNSPENAIVFIDLGYIRGNVSAITAAAINSINQIRTEIPEAIISVLATSFPSSVTNFCRENGQSGYIDVIERELHQNIGGSDVAIYGDHGSIHSVVYDNIIGRYVPRIDIALNDSWYFERRPGMNKEGFIEAAKSILAEYPHYQREDSWGAAMIRNAAIGDIAGMGSPAKWIAVRVNLHLNKQIELSEALQYGFDHDEEDLI
>NZ_CP027103.1|WP_000931915.1|650777_651179_-|protein-gop
MLNHVYGLIGVVGTIITIATSFIRNQDISQWLLVCSGWLAALLIGWFTHRTIKAISNNHTNVIKSNMEVIKSHNESNQNLMAENKELIKELARTSEQKEKMESIAAYLATQNPQINAMPRTASRPENIDSEAN
>NZ_CP027103.1|WP_000446132.1|651589_652162_-|Polarity-suppression-protein
MESTALQQAFDTCQNNKAAWLQRKNELAAAEQEYLRLLSGEGRNVSRLDELRNIIEVRKWQVNQAAGRYIRSHEAVQHISIRDRLNDFMQQHGTALAAALAPELMGYSELTAIARNCAIQRATDALREALLSWLAKGEKINYSAQDSDILTTIGFRPDAASVDDSREKFTPAQNMIFSRKSAQLASRQSV
>NZ_CP027103.1|WP_000638634.1|652235_652736_-|transactivation-protein
MIYCPSCGHVAHTRRAHFMDDGTKIMIAQCRNIYCSATFEASESFFSDSKDSGMEYISGKQRYRDSLTSASGSMKRPKRMLVTGYCCRRCKGLALSRTSRRLSQEVTERFYVCTDPGCGLVFKTLQTINRFIVRPVTPDELAERLHEKQELPPVRLKTQSYSLRLE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12113-12164	10	0.808
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	272-323	10	0.808
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31252-31303	10	0.808
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4115-4166	11	0.788
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4114-4165	11	0.788
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4114-4165	11	0.788
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4114-4165	11	0.788
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	152-203	11	0.788
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208982-209033	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	44-95	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219476-219527	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	43-94	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18332-18383	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210310-210361	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	43-94	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191265-191316	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	43-94	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7393-7444	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84217-84268	12	0.769
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3373-3424	13	0.75
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3372-3423	13	0.75
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15000-15051	13	0.75
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3372-3423	13	0.75
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3372-3423	13	0.75
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	70-121	14	0.731
NZ_CP027103_1	1.1\|640184\|52\|NZ_CP027103\|CRISPRCasFinder	640184-640235	52	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30159-30210	14	0.731

1. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
tcggtgcctgatgcgacgctggcgcgtcttatcaggcctacgagtcgcccgt	Protospacer
 *  ***************** ***********************.   .*.

2. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 *  *************************************.*. .*. *.*

3. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc--	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 *  *************************************..  .*. ***

4. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

5. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

6. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

7. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

8. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ttgaagcctgatgcgacgctgacgcgtcttatcaggcctacnagacccgagc	Protospacer
 .   **************** ******************* ** .* * **

9. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

10. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

11. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

12. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

13. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

14. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

15. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

16. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

17. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

18. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc---	CRISPR spacer
cggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa---actgcact	Protospacer
    ***************** ************ ******.*.   * ***

19. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc---	CRISPR spacer
cggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa---actgcact	Protospacer
    ***************** ************ ******.*.   * ***

20. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

21. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

22. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

23. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

24. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

25. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 14, identity: 0.731

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ccgatgcctgatgcgacgctgacgcgtcttatcatgcctacggacctgaacc	Protospacer
 *  ***************** ************ *******.......  *

26. spacer 1.1|640184|52|NZ_CP027103|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 14, identity: 0.731

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaatctgcaccc	Protospacer
 .  ***************** ************ ******.* .*  .. *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

165241 : 263900

Escherichia_phage(35.56%)

portal,tail,holin,lysis,tRNA,plate,protease,capsid,transposase,integrase,terminase,head

attL 180120:180139|attR 274613:274632

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000560983.1\|165241_165679_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_001297068.1\|165723_166665_+	fatty acid biosynthesis protein FabY	NA	NA	NA	NA
WP_001357065.1\|166728_167637_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000897302.1\|167865_168177_+	hypothetical protein	NA	NA	NA	NA
WP_000356397.1\|168177_168468_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001296612.1\|168826_169105_+	hypothetical protein	NA	NA	NA	NA
WP_001314326.1\|169500_169719_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_000027710.1\|169942_170872_-	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_001357064.1\|170868_171504_-	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA
WP_000331377.1\|171500_172403_-	formate dehydrogenase O subunit beta	NA	NA	NA	NA
WP_077627280.1\|172415_175466_-	formate dehydrogenase-N subunit alpha	A0A077SK27	Escherichia_phage	1.1e-07	23.8
WP_000753585.1\|175659_176493_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_000749934.1\|177488_178883_+	glycoporin	NA	NA	NA	NA
WP_001357063.1\|178923_179238_-	L-rhamnose mutarotase	NA	NA	NA	NA
WP_001179744.1\|179247_180072_-	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
180120:180139	attL	NA	NA	NA	NA
WP_001357062.1\|180164_181424_-	L-rhamnose isomerase	NA	NA	NA	NA
WP_000144110.1\|181420_182890_-	rhamnulokinase	NA	NA	NA	NA
WP_000217156.1\|183177_184014_+	HTH-type transcriptional activator RhaS	NA	NA	NA	NA
WP_001357061.1\|183997_184936_+	HTH-type transcriptional activator RhaR	NA	NA	NA	NA
WP_000063508.1\|184932_185967_-	L-rhamnose/proton symporter RhaT	NA	NA	NA	NA
WP_001298417.1\|186252_186873_+	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	8.4e-64	59.8
WP_107629864.1\|187151_188117_+	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA
WP_001270239.1\|188265_188940_+	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_001357059.1\|189044_190418_-	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	3.8e-16	25.9
WP_001033720.1\|190414_191113_-	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_001357058.1\|191262_191763_+	cell-envelope stress modulator CpxP	NA	NA	NA	NA
WP_000985246.1\|191949_192930_-\|integrase	tyrosine-type recombinase/integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
WP_000777029.1\|192999_193293_-	helix-turn-helix domain-containing protein	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
WP_001308179.1\|193429_193702_+	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
WP_000217670.1\|193871_194372_+	hypothetical protein	M1SV55	Escherichia_phage	2.6e-92	100.0
WP_000557698.1\|194435_194660_+	DUF2732 family protein	S4TP68	Salmonella_phage	5.2e-32	97.3
WP_001357057.1\|194659_194962_+	DUF5405 family protein	A0A0F7LCL4	Escherichia_phage	5.0e-46	97.0
WP_001113264.1\|194961_195186_+	TraR/DksA family transcriptional regulator	S4TRY6	Salmonella_phage	2.9e-35	100.0
WP_000027664.1\|195182_195458_+	DUF5405 family protein	U5N3W1	Enterobacteria_phage	3.8e-45	100.0
WP_001357056.1\|195447_197763_+	replication endonuclease	Q858T4	Yersinia_virus	0.0e+00	96.2
WP_001357055.1\|197777_198824_+\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	2.9e-08	23.8
WP_000038148.1\|201706_202741_-\|portal	phage portal protein	Q7Y4E8	Escherichia_virus	3.2e-201	99.7
WP_001357052.1\|202740_204513_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.7
WP_001085978.1\|204686_205541_+\|capsid	GPO family capsid scaffolding protein	Q94MH0	Enterobacteria_phage	6.2e-134	98.6
WP_001248578.1\|205599_206673_+\|capsid	phage major capsid protein, P2 family	Q94MK7	Enterobacteria_phage	3.3e-201	99.2
WP_024262840.1\|206676_207420_+\|terminase	terminase endonuclease subunit	Q94MK1	Enterobacteria_phage	6.2e-122	98.8
WP_000988636.1\|207519_208029_+\|head	head completion/stabilization protein	A0A0F7LDJ1	Escherichia_phage	8.6e-91	100.0
WP_000846399.1\|208028_208232_+\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
WP_000123124.1\|208235_208517_+\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_001357049.1\|208516_209014_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	6.9e-93	99.4
WP_001357048.1\|209028_209454_+	hypothetical protein	U5N096	Enterobacteria_phage	2.3e-60	98.6
WP_001357047.1\|209441_209867_+\|lysis	LysB family phage lysis regulatory protein	A0A0F7LDJ6	Escherichia_phage	6.8e-65	95.0
WP_000917180.1\|209974_210442_+\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	4.3e-81	98.7
WP_001001807.1\|210434_210887_+	phage virion morphogenesis protein	A0A0F7LDR6	Escherichia_phage	4.1e-76	99.3
WP_000127163.1\|211584_211932_+\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_001121474.1\|211936_212845_+\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	1.2e-162	100.0
WP_001357046.1\|212837_213368_+\|tail	phage tail protein I	U5N0U8	Enterobacteria_phage	4.3e-101	98.9
WP_001357045.1\|213378_215307_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	1.0e-224	71.3
WP_001357044.1\|215310_215838_+\|tail	tail fiber assembly protein	Q858V3	Yersinia_virus	4.4e-90	94.3
WP_032301962.1\|216059_216653_+	hypothetical protein	Q858S7	Enterobacteria_phage	9.7e-102	94.9
WP_001286703.1\|216983_218174_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.4e-224	99.5
WP_001251408.1\|218186_218705_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001031307.1\|218761_219037_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
WP_000785970.1\|219069_219189_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001357042.1\|219181_221629_+\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	0.0e+00	95.2
WP_000978910.1\|221643_222123_+\|tail	phage tail protein	Q7Y4C7	Escherichia_virus	2.5e-84	98.7
WP_000882980.1\|222122_223286_+	phage late control D family protein	U5N3V4	Enterobacteria_phage	6.3e-206	99.5
WP_000468308.1\|223367_223586_+	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_001076748.1\|223821_224724_+	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
WP_001318165.1\|224904_225867_+	6-phosphofructokinase	NA	NA	NA	NA
WP_000758727.1\|226186_227176_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001357041.1\|227282_228038_+	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_001216325.1\|228092_228860_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_000802217.1\|228967_229567_-	YiiQ family protein	NA	NA	NA	NA
WP_000155252.1\|229667_230108_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_000655986.1\|230319_230619_+	DUF406 domain-containing protein	NA	NA	NA	NA
WP_000323555.1\|230645_231074_+	universal stress protein UspD	NA	NA	NA	NA
WP_000796342.1\|231078_231825_-	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_001250644.1\|231921_232932_-	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000136788.1\|233102_234611_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_000084268.1\|234633_235479_-	glycerol uptake facilitator protein GlpF	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.4e-15	28.0
WP_001296623.1\|235903_236149_+	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_000872908.1\|236233_236719_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_001305044.1\|236811_237738_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_001293344.1\|237804_239136_-	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	1.7e-45	29.9
WP_000208242.1\|239145_239676_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_000068834.1\|239768_240728_-	cell division protein FtsN	NA	NA	NA	NA
WP_000644904.1\|240819_241845_-	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
WP_001340148.1\|242000_244199_-	primosomal protein N'	NA	NA	NA	NA
WP_000710769.1\|244401_244614_+	50S ribosomal protein L31	NA	NA	NA	NA
WP_000702302.1\|244674_245283_-	YiiX family permuted papain-like enzyme	NA	NA	NA	NA
WP_000852812.1\|245342_245660_-	met regulon transcriptional regulator MetJ	NA	NA	NA	NA
WP_001357040.1\|245936_247097_+	cystathionine gamma-synthase	NA	NA	NA	NA
WP_000110759.1\|247099_249532_+	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
WP_000275563.1\|249749_250610_-	nucleoside-specific channel-forming protein Tsx	NA	NA	NA	NA
WP_001357039.1\|250686_252306_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_000105532.1\|254118_255243_-	hypothetical protein	NA	NA	NA	NA
WP_000694066.1\|255375_256929_+	bifunctional metallophosphatase/5'-nucleotidase	A0A0B5J7T1	Pandoravirus	1.0e-09	24.2
WP_000007515.1\|257310_258201_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA
WP_001296626.1\|258529_260710_+	catalase/peroxidase HPI	NA	NA	NA	NA
WP_001271242.1\|260803_261709_+	cystine transporter YijE	NA	NA	NA	NA
WP_000647862.1\|261735_262353_-	DUF1287 domain-containing protein	NA	NA	NA	NA
WP_106426573.1\|262552_263900_+\|transposase	IS3-like element IS1397 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
274613:274632	attR	NA	NA	NA	NA

DBSCAN-SWA_2

647510 : 661491

Enterobacteria_phage(72.73%)

integrase,transposase

attL 642544:642559|attR 667782:667797

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
642544:642559	attL	NA	NA	NA	NA
WP_000772677.1\|647510_648779_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.1e-73	41.0
WP_001357997.1\|648885_649680_+	sce7726 family protein	A0A0U2RXY7	Escherichia_phage	8.3e-08	28.6
WP_001357996.1\|649707_650775_-	hypothetical protein	NA	NA	NA	NA
WP_000931915.1\|650777_651179_-	protein gop	NA	NA	NA	NA
WP_000446132.1\|651589_652162_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.2e-95	97.3
WP_000638634.1\|652235_652736_-	transactivation protein	NA	NA	NA	NA
WP_024262875.1\|652732_653467_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	2.6e-128	98.4
WP_001149160.1\|654018_654285_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	4.9e-45	100.0
WP_024262874.1\|654281_654872_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	5.3e-60	90.3
WP_001244670.1\|654864_655152_+	hypothetical protein	Q7M2A0	Enterobacteria_phage	2.5e-47	96.8
WP_001357995.1\|655144_655600_+	hypothetical protein	Q7M298	Enterobacteria_phage	4.7e-64	98.2
WP_001357994.1\|655735_656056_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_001357993.1\|656070_658404_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.5
WP_044815386.1\|658758_658953_+	hypothetical protein	Q38404	Enterobacteria_phage	1.5e-24	100.0
WP_085948128.1\|660277_661491_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	6.8e-102	57.8
667782:667797	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1043578 : 1055053

Enterobacteria_phage(88.89%)

integrase

attL 1042758:1042771|attR 1060528:1060541

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1042758:1042771	attL	NA	NA	NA	NA
WP_001356950.1\|1043578_1044754_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.5e-141	61.7
WP_001356949.1\|1044754_1046455_+	AAA family ATPase	NA	NA	NA	NA
WP_001356948.1\|1046451_1048074_+	ATP-dependent helicase	A0A068EQC7	Bacillus_phage	8.2e-10	24.4
WP_000446132.1\|1048274_1048847_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.2e-95	97.3
WP_032340366.1\|1048920_1049421_-	transactivation protein	NA	NA	NA	NA
WP_001356946.1\|1049417_1050152_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.8e-129	98.8
WP_001356944.1\|1050704_1050971_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	1.4e-44	98.9
WP_032340365.1\|1050967_1051522_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.2e-40	79.3
WP_001356942.1\|1051514_1051802_+	hypothetical protein	Q7M2A0	Enterobacteria_phage	4.3e-47	95.8
WP_001356941.1\|1051794_1052250_+	hypothetical protein	Q7M298	Enterobacteria_phage	4.7e-64	98.2
WP_001356939.1\|1052719_1055053_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.8
1060528:1060541	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1293485 : 1348339

Enterobacteria_phage(55.17%)

portal,tail,lysis,tRNA,protease,capsid,integrase,terminase,head

attL 1287955:1287970|attR 1349483:1349498

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1287955:1287970	attL	NA	NA	NA	NA
WP_000912345.1\|1293485_1294871_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8
WP_001143520.1\|1294906_1295428_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190288.1\|1295535_1295748_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729155.1\|1295749_1296616_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_001357000.1\|1296978_1298142_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	2.4e-197	86.0
WP_000446905.1\|1297997_1298369_-	helix-turn-helix domain-containing protein	M1FJ59	Enterobacteria_phage	2.1e-46	81.0
WP_000488407.1\|1298340_1298619_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
WP_000763385.1\|1298666_1298885_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	7.5e-36	100.0
WP_001386642.1\|1298983_1299265_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
WP_001356999.1\|1299275_1299833_-	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.0e-61	62.3
WP_000682294.1\|1299825_1299987_-	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	7.7e-22	96.0
WP_000186833.1\|1299983_1300664_-	YqaJ viral recombinase family protein	B6DZ61	Enterobacteria_phage	5.1e-131	98.2
WP_000100847.1\|1300660_1301446_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995433.1\|1301451_1301748_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-49	99.0
WP_000233576.1\|1301823_1302030_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000858975.1\|1302626_1303316_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_001067458.1\|1303420_1303651_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_001182903.1\|1303719_1304259_+	hypothetical protein	M9NZI6	Enterobacteria_phage	1.2e-61	66.1
WP_001551200.1\|1304345_1305275_+	replication protein	A0A0M5M7Y1	Salmonella_phage	8.0e-111	64.1
WP_000788815.1\|1305271_1305973_+	hypothetical protein	M1FJ72	Enterobacteria_phage	2.4e-128	98.7
WP_000145915.1\|1305969_1306272_+	protein ren	A0A0N6WES4	Escherichia_phage	1.1e-42	95.7
WP_001070442.1\|1306339_1306672_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_001299444.1\|1306719_1306869_+	hypothetical protein	NA	NA	NA	NA
WP_001356996.1\|1306926_1308453_+	recombinase family protein	Q3HQV4	Burkholderia_phage	7.9e-31	28.0
WP_001445652.1\|1308917_1309469_+	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_000881075.1\|1309478_1310276_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001303586.1\|1310392_1310494_+	hypothetical protein	NA	NA	NA	NA
WP_001356995.1\|1310490_1310946_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	3.7e-61	67.5
WP_000224914.1\|1310945_1311116_+	hypothetical protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
WP_000774486.1\|1311108_1311399_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	3.3e-47	93.8
WP_001356994.1\|1311395_1311758_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	9.5e-60	96.5
WP_001307651.1\|1311754_1311895_+	YlcG family protein	K7PHH3	Enterobacteria_phage	8.5e-09	69.8
WP_001204780.1\|1311980_1312364_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	4.0e-56	84.2
WP_001356992.1\|1312552_1313635_-	porin OmpD	Q1MVN1	Enterobacteria_phage	2.0e-153	76.3
WP_000839596.1\|1314223_1314439_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135274.1\|1314438_1314936_+	lysozyme	M1FJA0	Enterobacteria_phage	3.2e-90	97.0
WP_077628513.1\|1315152_1315335_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.5e-16	96.7
WP_000738423.1\|1315425_1315719_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	2.0e-44	91.8
WP_001307652.1\|1316078_1316273_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
WP_000453611.1\|1316661_1317207_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
WP_001027269.1\|1317181_1319107_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
WP_000198153.1\|1319103_1319310_+\|head,tail	head-tail joining protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
WP_001357874.1\|1319306_1320908_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	6.1e-308	98.5
WP_001357873.1\|1320888_1322208_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.0e-231	97.9
WP_001357872.1\|1322217_1322550_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	8.4e-55	98.2
WP_001357871.1\|1322605_1323631_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.1e-188	97.4
WP_000158875.1\|1323672_1324068_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	1.1e-58	95.5
WP_000785282.1\|1324079_1324433_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	6.4e-61	97.4
WP_001357870.1\|1325018_1325414_+\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	2.9e-70	98.5
WP_001357869.1\|1325421_1326162_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.6e-130	98.4
WP_001357868.1\|1326177_1326600_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	8.2e-71	96.4
WP_000459457.1\|1326581_1327016_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_001357867.1\|1327008_1329570_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	92.0
WP_000847347.1\|1329566_1329896_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	3.6e-58	99.1
WP_001357866.1\|1329895_1330594_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.7e-132	98.3
WP_000194779.1\|1330599_1331343_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.0e-149	97.6
WP_000090917.1\|1331279_1331912_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-97	100.0
WP_001230378.1\|1335436_1336036_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	4.4e-110	98.0
WP_024262868.1\|1336100_1339127_+\|tail	tail protein	U5N099	Enterobacteria_phage	7.2e-68	82.1
WP_001357863.1\|1339126_1339702_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.2e-102	94.8
WP_000086527.1\|1339799_1340390_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000836772.1\|1340706_1340940_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	4.1e-32	87.0
WP_120795384.1\|1341008_1341122_-	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000239881.1\|1341487_1342156_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000386784.1\|1343018_1343768_+	DNA-binding transcriptional activator AppY	NA	NA	NA	NA
WP_001357862.1\|1344017_1344971_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
WP_001695516.1\|1345445_1345754_-\|integrase	tyrosine-type recombinase/integrase	Q76H30	Enterobacteria_phage	1.8e-38	69.3
WP_001695517.1\|1345773_1346073_-\|integrase	tyrosine-type recombinase/integrase	B9UDL9	Salmonella_phage	5.0e-30	82.4
WP_000239877.1\|1346485_1347154_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001357859.1\|1347385_1348339_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
1349483:1349498	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1919949 : 1973798

Enterobacteria_phage(45.45%)

portal,holin,tail,tRNA,protease,integrase,terminase

attL 1915044:1915058|attR 1921524:1921538

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1915044:1915058	attL	NA	NA	NA	NA
WP_000074983.1\|1919949_1921068_-\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	7.7e-84	44.2
WP_000003742.1\|1921036_1921306_-	excisionase	NA	NA	NA	NA
WP_001356839.1\|1921367_1923839_-	exonuclease	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
1921524:1921538	attR	NA	NA	NA	NA
WP_001090200.1\|1923931_1924123_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449192.1\|1924119_1924308_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001296188.1\|1924707_1924872_+	hypothetical protein	NA	NA	NA	NA
WP_001171942.1\|1924875_1925094_-	hypothetical protein	NA	NA	NA	NA
WP_000379575.1\|1925253_1925409_-	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_000787428.1\|1925614_1926022_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000912294.1\|1926098_1926326_+	transcriptional regulator	NA	NA	NA	NA
WP_000705383.1\|1926309_1926861_+	hypothetical protein	NA	NA	NA	NA
WP_001357499.1\|1926832_1927873_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	6.9e-87	84.6
WP_159065192.1\|1927865_1928327_+	replication protein	A0A0U2JGJ0	Escherichia_phage	2.9e-85	98.7
WP_001357497.1\|1928361_1929108_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	3.9e-108	83.9
WP_122368318.1\|1929104_1929269_+	hypothetical protein	NA	NA	NA	NA
WP_032340380.1\|1929967_1930726_+	AcfC family adhesin Paa	NA	NA	NA	NA
WP_000961821.1\|1931008_1931221_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
WP_001357494.1\|1931441_1931702_+	hypothetical protein	NA	NA	NA	NA
WP_032340379.1\|1931768_1932047_+	hypothetical protein	I6PCV7	Cronobacter_phage	1.3e-11	48.4
WP_001357493.1\|1932048_1933107_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	9.8e-89	47.7
WP_001357492.1\|1933107_1933488_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	4.1e-37	64.6
WP_001357491.1\|1933484_1934306_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.1e-79	59.3
WP_001341380.1\|1934945_1935377_+	tellurite resistance protein	H6WZJ6	Escherichia_phage	1.6e-66	96.5
WP_001357487.1\|1935869_1936040_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	9.7e-23	96.4
WP_000411802.1\|1936506_1936713_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_000075159.1\|1936712_1937210_+	lysozyme	A5LH83	Enterobacteria_phage	1.3e-91	100.0
WP_134235334.1\|1937426_1937612_+	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	1.9e-19	78.7
WP_000232224.1\|1937695_1938058_+	hypothetical protein	A5LH85	Enterobacteria_phage	8.9e-66	99.2
WP_000421824.1\|1938509_1939049_+	DUF1441 family protein	A5LH26	Enterobacteria_phage	3.0e-94	99.4
WP_024262851.1\|1939057_1941157_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	0.0e+00	99.6
WP_001072975.1\|1941153_1941366_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_001357481.1\|1941365_1942874_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	2.5e-287	99.2
WP_077627454.1\|1942818_1944846_+\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.5
WP_001097050.1\|1944932_1945256_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_001283153.1\|1945248_1945524_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_000677112.1\|1945535_1946114_+\|tail	phage tail protein	A0A291AWZ0	Escherichia_phage	9.4e-102	99.5
WP_001079419.1\|1946110_1946512_+\|tail	tail protein	A5LH34	Enterobacteria_phage	1.9e-72	99.2
WP_000211123.1\|1946522_1947266_+\|tail	phage tail protein	A5LH35	Enterobacteria_phage	9.5e-131	98.0
WP_001300035.1\|1947326_1947713_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
WP_001161009.1\|1947721_1948051_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_000447253.1\|1951086_1951416_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
WP_001152388.1\|1951425_1952124_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	8.6e-134	99.6
WP_071987287.1\|1952128_1952872_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.7e-152	99.2
WP_032340378.1\|1952769_1953417_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	5.0e-112	97.2
WP_001357476.1\|1953477_1956873_+	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	88.9
WP_001357475.1\|1956940_1957540_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	2.8e-101	91.0
WP_024262850.1\|1957604_1958918_+\|tail	tail fiber protein	H6WZM9	Escherichia_phage	2.8e-77	98.2
WP_001023999.1\|1958919_1959189_+\|tail	phage tail protein	Q687E5	Enterobacteria_phage	1.7e-42	95.5
WP_077627453.1\|1959460_1960096_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	1.8e-61	75.3
WP_024262848.1\|1961378_1962005_-	T3SS effector NleG family protein	B6DZZ5	Stx2-converting_phage	5.9e-25	37.8
WP_024262847.1\|1962188_1962779_+	T3SS effector guanine nucleotide exchange factor EspM2	NA	NA	NA	NA
WP_001357468.1\|1963238_1963403_+\|tail	phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	8.5e-16	87.2
WP_000799402.1\|1963635_1964499_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000531594.1\|1964482_1965619_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
WP_000359446.1\|1965868_1967095_+	peptidase T	NA	NA	NA	NA
WP_001357466.1\|1967143_1968265_-	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000734671.1\|1968340_1969801_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001265481.1\|1969800_1970472_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_001357465.1\|1970640_1972011_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.6e-107	44.6
WP_001295971.1\|1972014_1972656_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_001298466.1\|1972691_1973798_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_6

2707067 : 2764497

Enterobacteria_phage(35.29%)

portal,tail,holin,capsid,transposase,integrase,terminase,head

attL 2716219:2716278|attR 2764550:2764611

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_107629894.1\|2707067_2708141_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
WP_001357750.1\|2709358_2710210_+	protein deglycase HchA	NA	NA	NA	NA
WP_001357749.1\|2710317_2711676_-	two-component system sensor histidine kinase HprS	NA	NA	NA	NA
WP_024191816.1\|2711675_2712347_-	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	1.4e-32	35.6
WP_000920127.1\|2712479_2712893_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_001357747.1\|2713001_2714006_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_001240076.1\|2714006_2714642_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_001007792.1\|2714898_2715549_+	metal-binding protein ZinT	NA	NA	NA	NA
2716219:2716278	attL	NA	NA	NA	NA
WP_000938107.1\|2716993_2717563_-	T3SS effector caspase inhibitor NleF	NA	NA	NA	NA
WP_095111390.1\|2718692_2718824_-	hypothetical protein	K7PMH7	Enterobacteria_phage	1.5e-07	76.5
WP_000950813.1\|2719170_2720151_-	type III secretion system effector arginine glycosyltransferase NleB2	Q8HAB2	Salmonella_phage	2.9e-87	49.5
WP_001101707.1\|2720327_2720597_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	9.3e-44	97.8
WP_000268803.1\|2720598_2721912_-\|tail	phage tail protein	H6WZM9	Escherichia_phage	1.2e-75	97.3
WP_024262859.1\|2721976_2722600_-	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	3.9e-69	61.4
WP_001357743.1\|2722668_2726145_-	host specificity protein J	Q6H9T2	Enterobacteria_phage	0.0e+00	96.6
WP_000649825.1\|2726278_2726806_+	superoxide dismutase family protein	Q9MC02	Salmonella_phage	2.1e-60	61.0
WP_097479149.1\|2726996_2727629_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	4.9e-104	92.3
WP_001357741.1\|2727574_2728318_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.6e-147	97.2
WP_001357740.1\|2728323_2729022_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.1e-132	98.7
WP_000847304.1\|2729021_2729351_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	95.4
WP_000082334.1\|2729347_2731927_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.0
WP_000533425.1\|2731907_2732321_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
WP_000479105.1\|2732347_2732779_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
WP_001357739.1\|2732792_2733545_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.6e-133	98.0
WP_000683066.1\|2733552_2733948_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	3.9e-59	83.2
WP_000975046.1\|2733944_2734478_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.2e-57	65.1
WP_001204547.1\|2734493_2734847_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-41	70.1
WP_000201525.1\|2734839_2735214_-	hypothetical protein	NA	NA	NA	NA
WP_000522615.1\|2735265_2736294_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.9e-114	60.7
WP_000256809.1\|2736351_2736699_-\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
WP_001253961.1\|2736735_2738241_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	1.0e-99	54.2
WP_000831765.1\|2738230_2739823_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.2e-184	60.9
WP_000259002.1\|2739819_2740026_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_001300238.1\|2740009_2741938_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	2.7e-262	66.0
WP_000235436.1\|2741909_2742419_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001300236.1\|2742821_2743046_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
WP_001303878.1\|2743127_2743442_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_012816791.1\|2743969_2744155_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_000675931.1\|2744376_2744490_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
WP_001003118.1\|2744710_2745244_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
WP_000138558.1\|2745403_2745676_+	hypothetical protein	NA	NA	NA	NA
WP_000411804.1\|2745931_2746138_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	5.3e-31	98.5
WP_001358067.1\|2746585_2748436_-	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	0.0e+00	97.9
WP_001344632.1\|2748878_2749010_-	DUF3927 family protein	H6WZJ7	Escherichia_phage	5.2e-08	85.7
WP_000762860.1\|2749606_2750428_-	hypothetical protein	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
WP_000904093.1\|2750424_2750799_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	6.4e-35	62.7
WP_001265045.1\|2750811_2751861_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	7.9e-107	53.4
WP_001410105.1\|2751862_2752141_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.6e-11	46.9
WP_000813254.1\|2752307_2752463_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001358068.1\|2752534_2753623_+\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
WP_001278455.1\|2753809_2753914_-	hypothetical protein	NA	NA	NA	NA
WP_000207995.1\|2754029_2754899_-	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	1.0e-120	77.2
WP_000224233.1\|2754909_2755173_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_000256993.1\|2755174_2755393_-	DUF4014 family protein	A0A1I9LJM2	Stx_converting_phage	1.1e-26	86.1
WP_000935420.1\|2755425_2755638_-	hypothetical protein	A0A2R2Z310	Escherichia_phage	5.8e-33	94.3
WP_001358070.1\|2756064_2756490_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.4e-62	90.7
WP_000095671.1\|2756530_2757493_-	DNA-binding protein	U5P0A0	Shigella_phage	2.1e-69	51.2
WP_000693916.1\|2757515_2757941_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000711018.1\|2757924_2758248_-	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.2e-10	44.9
WP_000948452.1\|2758372_2758849_+	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	5.7e-12	53.4
WP_000379593.1\|2759167_2759323_+	DUF1391 family protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_001171966.1\|2759482_2759701_+	hypothetical protein	NA	NA	NA	NA
WP_001358071.1\|2759704_2759869_-	hypothetical protein	NA	NA	NA	NA
WP_000449192.1\|2760269_2760458_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001090200.1\|2760454_2760646_+	DUF1482 family protein	NA	NA	NA	NA
WP_001358072.1\|2760738_2763210_+	exonuclease	K7PLW7	Enterobacteria_phage	1.1e-58	60.7
WP_000067202.1\|2763268_2763472_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533619.1\|2763471_2764497_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.0e-102	57.9
2764550:2764611	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2883804 : 2937479

Escherichia_phage(31.71%)

portal,holin,lysis,tRNA,protease,capsid,transposase,integrase,tail,terminase,head

attL 2871014:2871031|attR 2927678:2927695

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2871014:2871031	attL	NA	NA	NA	NA
WP_085948123.1\|2883804_2884972_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.7e-171	91.5
WP_100249772.1\|2885482_2885539_-	type I toxin-antitoxin system Ibs family toxin	NA	NA	NA	NA
WP_001247931.1\|2885959_2886658_-\|protease	T3SS effector zinc metalloprotease NleD	NA	NA	NA	NA
WP_001592261.1\|2887126_2888146_-\|protease	type III secretion system effector zinc metalloprotease NleC	NA	NA	NA	NA
WP_001358129.1\|2888179_2889160_-	type III secretion system effector arginine glycosyltransferase NleB2	Q8HAB2	Salmonella_phage	8.5e-87	49.2
WP_001592264.1\|2889521_2890100_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	5.6e-54	59.0
WP_001023457.1\|2890213_2890483_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	4.2e-44	98.9
WP_001592266.1\|2890484_2891798_-	hypothetical protein	A0A0P0ZCC1	Stx2-converting_phage	8.8e-79	97.3
WP_001228241.1\|2891862_2892462_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	2.4e-100	91.0
WP_085948129.1\|2892530_2893744_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	2.6e-101	57.4
WP_001358132.1\|2893764_2894040_-\|tail	tail protein	A0A2I6TC77	Escherichia_phage	1.5e-44	96.6
WP_001358133.1\|2894047_2894443_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.1e-69	97.7
WP_001358134.1\|2894439_2894973_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	3.6e-63	73.4
WP_001358135.1\|2894984_2895338_-\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	2.0e-62	99.1
WP_001358136.1\|2895349_2895748_-	phage DNA-packaging protein	A0A2R9YJP4	Escherichia_phage	3.0e-59	94.7
WP_001358137.1\|2895789_2896554_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	2.6e-139	98.0
WP_021559942.1\|2896699_2896885_+	hypothetical protein	NA	NA	NA	NA
WP_001358138.1\|2896929_2897691_+	abortive infection family protein	NA	NA	NA	NA
WP_001356805.1\|2898683_2899292_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	5.4e-100	91.1
WP_001356806.1\|2899371_2899755_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_021559944.1\|2899766_2900108_-\|head	head decoration protein	NA	NA	NA	NA
WP_001356808.1\|2900117_2901158_-\|capsid	phage capsid protein	C6ZCY2	Enterobacteria_phage	2.6e-65	42.4
WP_001356809.1\|2901375_2901825_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_001356810.1\|2901821_2902079_-	hypothetical protein	NA	NA	NA	NA
WP_001356812.1\|2904115_2904415_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_001091145.1\|2904432_2904654_-	hypothetical protein	NA	NA	NA	NA
WP_001156310.1\|2904654_2904846_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	1.1e-11	59.3
WP_021559945.1\|2904845_2905031_-	hypothetical protein	NA	NA	NA	NA
WP_064716654.1\|2905023_2905311_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_021559946.1\|2905366_2905561_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_021559947.1\|2905585_2906311_+	hypothetical protein	NA	NA	NA	NA
WP_021559948.1\|2906351_2906585_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001365132.1\|2907953_2908223_-\|capsid	capsid protein	A0A2I6TCE5	Escherichia_phage	5.3e-39	100.0
WP_001356817.1\|2908284_2908617_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	7.1e-54	97.3
WP_001356818.1\|2908626_2909946_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.4e-233	98.4
WP_001356819.1\|2909926_2911528_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	99.2
WP_000198149.1\|2911524_2911731_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_024235691.1\|2911727_2913653_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
WP_000453587.1\|2913627_2914173_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_000881326.1\|2914662_2915280_-	hypothetical protein	A0A1R3Y613	Salmonella_virus	6.5e-93	85.9
WP_001357156.1\|2915429_2915867_-\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	2.9e-71	97.9
WP_000075143.1\|2915863_2916361_-	lysozyme	H6WZK1	Escherichia_phage	3.8e-91	98.8
WP_000284524.1\|2916360_2916576_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
WP_012578864.1\|2916718_2917117_+	hypothetical protein	H6WZJ8	Escherichia_phage	6.9e-11	83.3
WP_000499454.1\|2917197_2917356_-	DUF3927 family protein	NA	NA	NA	NA
WP_001302581.1\|2917441_2918185_-	hypothetical protein	NA	NA	NA	NA
WP_001235438.1\|2918436_2919060_-	antitermination protein	K7P6X1	Enterobacteria_phage	4.4e-113	98.1
WP_021559685.1\|2919056_2919722_-	serine/threonine protein phosphatase	A0A088CPU5	Enterobacteria_phage	1.4e-128	97.3
WP_024229307.1\|2919718_2920339_-	recombination protein NinG	Q716C3	Shigella_phage	3.7e-96	97.1
WP_000566997.1\|2920331_2920502_-	protein ninF	Q716C4	Shigella_phage	3.2e-26	100.0
WP_016063117.1\|2920498_2920681_-	NinE family protein	K7PH28	Enterobacteria_phage	7.4e-29	100.0
WP_000814618.1\|2920677_2921088_-	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	2.0e-69	97.8
WP_000229808.1\|2921095_2921302_-	hypothetical protein	G8C7M4	Escherichia_phage	6.7e-26	95.6
WP_000145926.1\|2921374_2921665_-	protein ren	O48423	Enterobacteria_phage	9.6e-47	100.0
WP_085948123.1\|2921977_2923145_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.7e-171	91.5
WP_071792051.1\|2923185_2924133_+\|integrase	tyrosine-type recombinase/integrase	K7PHK0	Enterobacteria_phage	3.3e-168	96.2
WP_001357162.1\|2924476_2925724_+	multidrug efflux RND transporter subunit MdtA	NA	NA	NA	NA
WP_001197878.1\|2925723_2928846_+	multidrug efflux RND transporter permease subunit MdtB	NA	NA	NA	NA
2927678:2927695	attR	NA	NA	NA	NA
WP_021541090.1\|2928846_2931924_+	multidrug efflux RND transporter permease subunit MdtC	NA	NA	NA	NA
WP_001357165.1\|2931924_2933340_+	MFS transporter	NA	NA	NA	NA
WP_000675178.1\|2933336_2934740_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	7.0e-34	29.8
WP_000137877.1\|2934736_2935459_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	3.7e-31	33.6
WP_001300972.1\|2935638_2935971_+	YegP family protein	NA	NA	NA	NA
WP_000476019.1\|2936117_2937479_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	5.5e-217	99.5

DBSCAN-SWA_8

3209574 : 3257151

Enterobacteria_phage(75.56%)

portal,tail,holin,tRNA,plate,capsid,transposase,integrase,terminase,head

attL 3212580:3212599|attR 3251210:3251229

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001283598.1\|3209574_3210387_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289165.1\|3210386_3211400_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000004835.1\|3211465_3212623_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	4.6e-23	29.4
3212580:3212599	attL	NA	NA	NA	NA
WP_000023402.1\|3212781_3213786_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	4.5e-99	55.7
WP_001390705.1\|3213882_3214203_-	helix-turn-helix transcriptional regulator	Q1JS37	Enterobacteria_phage	1.4e-14	43.2
WP_089627012.1\|3214316_3214604_+	hypothetical protein	A0A0M4RCW1	Salmonella_phage	1.9e-23	53.7
WP_089627013.1\|3214610_3214817_+	hypothetical protein	NA	NA	NA	NA
WP_000813363.1\|3215069_3215411_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	2.3e-55	92.2
WP_000158971.1\|3215421_3215709_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	7.8e-33	76.8
WP_000514277.1\|3215720_3215963_+	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_000021652.1\|3215959_3216073_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	3.3e-11	97.3
WP_000985161.1\|3216159_3216363_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.9e-26	86.6
WP_000153676.1\|3216359_3216605_+	winged helix-turn-helix transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	6.7e-41	100.0
WP_000104308.1\|3216601_3216901_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	1.4e-40	88.9
WP_157839808.1\|3216912_3217530_+	hypothetical protein	S5MQL6	Escherichia_phage	2.2e-11	44.7
WP_107629906.1\|3217526_3217892_+	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	3.3e-60	95.9
WP_159065193.1\|3217898_3220724_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	97.4
WP_107629908.1\|3220909_3221755_+	DNA adenine methylase	A0A219VHB5	Ochrobactrum_phage	1.6e-09	26.6
WP_000588792.1\|3221772_3223470_+	AAA family ATPase	NA	NA	NA	NA
WP_000087812.1\|3224160_3225207_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
WP_107629910.1\|3225206_3226958_-	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
WP_001262688.1\|3227112_3227949_+\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.5e-119	80.6
WP_001055104.1\|3227972_3229025_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.3e-194	97.7
WP_001559525.1\|3229070_3229871_+\|terminase	phage small terminase subunit	A0A0A7NPX9	Enterobacteria_phage	2.1e-128	90.2
WP_000063082.1\|3229973_3230468_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	2.7e-89	99.4
WP_000864901.1\|3230467_3230668_+\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_000104350.1\|3230670_3230994_+\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
WP_000072327.1\|3230990_3231383_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_000780546.1\|3231379_3231787_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	6.1e-63	94.1
WP_107629912.1\|3231924_3232392_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	1.4e-84	98.7
WP_000356339.1\|3232384_3233020_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.1e-114	100.0
WP_001271925.1\|3233016_3233598_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.1e-102	98.4
WP_000213447.1\|3233594_3233945_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
WP_089648569.1\|3233948_3234845_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	2.1e-156	99.0
WP_107629914.1\|3234837_3235368_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	5.6e-93	98.8
WP_107629916.1\|3235370_3237530_+\|tail	phage tail protein	A0A0F7LDR4	Escherichia_phage	6.1e-194	62.8
WP_107629918.1\|3237531_3238056_+\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	7.5e-90	95.4
WP_107629919.1\|3238084_3238618_-\|tail	tail fiber assembly protein	A0A077SL44	Escherichia_phage	6.7e-94	97.7
WP_021513639.1\|3239645_3240233_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.7e-103	97.9
WP_000979945.1\|3240268_3240757_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.4e-85	99.4
WP_107629921.1\|3240769_3243577_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	97.9
WP_000333503.1\|3243563_3243719_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_040090535.1\|3243727_3244102_-\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	9.0e-37	72.5
WP_000290462.1\|3244157_3244670_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	1.5e-90	97.1
WP_000005386.1\|3244669_3245854_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	1.8e-224	98.7
WP_000132855.1\|3246011_3247121_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	3.1e-194	94.3
WP_000604994.1\|3247243_3248029_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_000488107.1\|3248224_3248485_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_107629922.1\|3248625_3249714_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
WP_032140709.1\|3249777_3249918_+	Hok/Gef family protein	S5M7Q0	Escherichia_phage	3.8e-09	65.2
WP_001353016.1\|3250167_3250365_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000215754.1\|3250309_3251101_+	site-specific DNA-methyltransferase	Q775B4	Bordetella_phage	5.1e-66	52.6
WP_001357240.1\|3251330_3252326_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
3251210:3251229	attR	NA	NA	NA	NA
WP_001357241.1\|3252322_3253501_-	MFS transporter	NA	NA	NA	NA
WP_000817183.1\|3253765_3254986_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_001357242.1\|3255144_3257151_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA

DBSCAN-SWA_9

3627933 : 3635073

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000103863.1\|3627933_3630495_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
WP_001141304.1\|3630600_3631257_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	8.6e-51	46.6
WP_001298167.1\|3631307_3632075_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.2e-69	57.4
WP_001357574.1\|3632270_3633179_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.3e-117	76.2
WP_000590411.1\|3633175_3634438_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001279001.1\|3634434_3635073_+	aldolase	A0A077SK32	Escherichia_phage	2.8e-83	75.0

DBSCAN-SWA_10

3849215 : 3910323

Enterobacteria_phage(25.0%)

protease,transposase,tRNA,integrase

attL 3850912:3850927|attR 3890690:3890705

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032155039.1\|3849215_3849713_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_001305312.1\|3849807_3850515_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222509.1\|3850594_3851326_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
3850912:3850927	attL	NA	NA	NA	NA
WP_000593259.1\|3851338_3852289_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|3852397_3852961_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017106.1\|3852960_3853377_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_021560029.1\|3853550_3854531_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|3854548_3855253_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|3855270_3855837_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|3855833_3856124_+	YggU family protein	NA	NA	NA	NA
WP_001174738.1\|3856131_3856725_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_001357634.1\|3856717_3857854_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_001357635.1\|3857918_3858926_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394107.1\|3859042_3860089_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|3860264_3860984_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001107565.1\|3861167_3861494_-	YggL family protein	NA	NA	NA	NA
WP_000786907.1\|3861493_3862213_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001357636.1\|3862373_3863426_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|3863453_3863729_+	oxidative damage protection protein	NA	NA	NA	NA
WP_000760323.1\|3863793_3864873_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001296363.1\|3865074_3866331_+	nucleoside permease	NA	NA	NA	NA
WP_001357637.1\|3866379_3868515_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234491.1\|3868913_3869621_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001219010.1\|3869961_3871224_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	4.3e-67	35.1
WP_001228211.1\|3871495_3872377_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_000193312.1\|3873019_3873235_-	transcriptional regulator	A0A2I7S995	Vibrio_phage	2.5e-15	58.2
WP_000201180.1\|3873231_3873702_-	hypothetical protein	NA	NA	NA	NA
WP_001357638.1\|3874372_3876568_-	AAA family ATPase	NA	NA	NA	NA
WP_000109324.1\|3876767_3877385_+	hypothetical protein	NA	NA	NA	NA
WP_001357639.1\|3877384_3878446_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_100199205.1\|3880129_3881478_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
WP_001357643.1\|3883688_3885884_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_021560034.1\|3886808_3888047_-	hypothetical protein	NA	NA	NA	NA
WP_000895362.1\|3888046_3888670_-	hypothetical protein	NA	NA	NA	NA
WP_021560035.1\|3888669_3892335_-	ATP-binding protein	NA	NA	NA	NA
3890690:3890705	attR	NA	NA	NA	NA
WP_001178367.1\|3892606_3893653_+\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	2.9e-08	23.8
WP_001357644.1\|3893857_3894409_-	type II secretion system protein	NA	NA	NA	NA
WP_001357645.1\|3894410_3895589_-	type II secretion system protein GspL	NA	NA	NA	NA
WP_001357646.1\|3895585_3896563_-	type II secretion system minor pseudopilin GspK	NA	NA	NA	NA
WP_021560036.1\|3896559_3897165_-	type II secretion system minor pseudopilin GspJ	NA	NA	NA	NA
WP_000820077.1\|3897161_3897533_-	type II secretion system minor pseudopilin GspI	NA	NA	NA	NA
WP_001357648.1\|3897529_3898093_-	type II secretion system minor pseudopilin GspH	NA	NA	NA	NA
WP_001087289.1\|3898096_3898552_-	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_001357649.1\|3898568_3899792_-	type II secretion system inner membrane protein GspF	NA	NA	NA	NA
WP_001357650.1\|3899791_3901285_-	type II secretion system ATPase GspE	NA	NA	NA	NA
WP_000498844.1\|3901284_3903345_-	type II secretion system secretin GspD	NA	NA	NA	NA
WP_001357651.1\|3903374_3904334_-	type II secretion system protein GspC	NA	NA	NA	NA
WP_001298257.1\|3904351_3904762_-	GspS/AspS pilotin family protein	NA	NA	NA	NA
WP_001357652.1\|3904827_3905637_-	prepilin peptidase	NA	NA	NA	NA
WP_001357653.1\|3905766_3910323_-\|protease	lipoprotein metalloprotease SslE	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage