CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP028536	Enterobacter hormaechei strain SCEH020042 plasmid pNDM5_020042, complete sequence	0 crisprs	NA	4
NZ_CP028538	Enterobacter hormaechei strain SCEH020042 chromosome, complete genome	3 crisprs	RT,cas3,DEDDh,WYL,csa3,DinG,cas14j	6
NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	0 crisprs	NA	3

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 11322

Streptococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004221702.1\|3651_3837_-	hypothetical protein	NA	NA	NA	NA
WP_004221700.1\|3794_4007_-	hypothetical protein	NA	NA	NA	NA
WP_000557557.1\|4069_4345_-	hypothetical protein	NA	NA	NA	NA
WP_000510385.1\|4362_4617_-	hypothetical protein	NA	NA	NA	NA
WP_000196235.1\|4726_5548_-	sprT domain-containing protein	NA	NA	NA	NA
WP_023408316.1\|5544_5724_-	hypothetical protein	NA	NA	NA	NA
WP_000351937.1\|5996_6647_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001293458.1\|6684_7140_-	DNA-binding protein	NA	NA	NA	NA
WP_004199098.1\|7151_9479_-	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	8.6e-37	28.1
WP_000517490.1\|9482_10745_-	ATP-binding protein	A0A1V0SKF8	Klosneuvirus	1.3e-07	31.4
WP_001215543.1\|10827_11322_-	hypothetical protein	A0A0R6PHV6	Moraxella_phage	8.0e-17	37.3

DBSCAN-SWA_2

29953 : 30469

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001025390.1\|29953_30469_-	molecular chaperone DnaJ	A0A2K9L588	Tupanvirus	3.3e-05	39.8

DBSCAN-SWA_3

35069 : 39522

Escherichia_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000516402.1\|35069_35732_-	peptidyl-arginine deiminase	E5FFJ3	Burkholderia_phage	2.6e-07	25.2
WP_001549893.1\|36112_36775_+	hypothetical protein	M9Q1K0	Clostridium_phage	9.7e-10	29.1
WP_000343760.1\|36863_38084_-\|transposase	ISL3 family transposase ISKox3	NA	NA	NA	NA
WP_001549892.1\|38185_38425_+	hypothetical protein	I6PD82	Cronobacter_phage	4.4e-21	55.1
WP_004199403.1\|38427_38784_+	hypothetical protein	A0A222YZE2	Escherichia_phage	5.5e-20	46.6
WP_001067855.1\|38817_39522_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_4

42784 : 43955

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001310555.1\|42784_43801_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7
WP_094888173.1\|43838_43955_-	sugar kinase	Q6QLL3	Human_immunodeficiency_virus	1.1e-14	97.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP028538

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP028538_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP028538_1

1028143-1028273

Orphan

Consensus_repeat	Method
ATATACGGGAAAAACCCGTATGTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP028538_1

>merge|NZ_CP028538|1|1028143-1028273|CRISPRCasFinder
ATATACGGGAAAAACCCGTATGTTCAGATGTTGGTTAACTGGATATACAGGAAAAACCCGTATGTCTGCATGATGATATACAGGAAAAACCCGTATGTTTCGGCATGATATACGGGAAAAACCTGTACTAT

>NZ_CP028538|1|1|1028143-1028273|CRISPRCasFinder
ATATACGGGAAAAACCCGTATGTT	CAGATGTTGGTTAACTGG
ATATACAGGAAAAACCCGTATGTC	TGCATGATGATATACAGGAAAAACCCGTATGTTTCGGCATG
ATATACGGGAAAAACCTGTACTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP028538.1\|WP_023305522.1\|1018280_1020275_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|281845
NZ_CP028538.1\|WP_023303163.1\|1036084_1036756_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225110
NZ_CP028538.1\|WP_023305526.1\|1023237_1023468_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368216
NZ_CP028538.1\|WP_080347057.1\|1030990_1031227_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_023305523.1\|1020309_1021779_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_040117149.1\|1029588_1030422_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236768
NZ_CP028538.1\|WP_023303159.1\|1032435_1032795_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_045259859.1\|1031216_1031567_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_023305524.1\|1021775_1022693_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
NZ_CP028538.1\|WP_003862898.1\|1032223_1032439_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_023303152.1\|1026203_1026575_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_023303161.1\|1033983_1034184_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_023305527.1\|1023448_1023988_+\|lysozyme	unknown	unknown	gnl\|CDD\|226295
NZ_CP028538.1\|WP_023305528.1\|1023984_1024347_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_045259856.1\|1026653_1027271_-\|phage-integrase	unknown	unknown	gnl\|CDD\|271192
NZ_CP028538.1\|WP_045259860.1\|1032811_1033852_+\|phage-capsid-E-family-protein	unknown	unknown	gnl\|CDD\|377147
NZ_CP028538.1\|WP_045259863.1\|1037049_1038300_-\|integrase	unknown	unknown	gnl\|CDD\|271184
NZ_CP028538.1\|WP_108168558.1\|1034176_1036042_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378260
NZ_CP028538.1\|WP_032624792.1\|1025452_1025731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_023305525.1\|1022689_1023052_-\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229

Protein	Function_ID	Function_description	E-value
NZ_CP028538.1\|WP_023305522.1\|1018280_1020275_+\|hypothetical-protein	gnl\|CDD\|281845	pfam03906, Phage_T7_tail, Phage T7 tail fibre protein. The bacteriophage T7 tail complex consists of a conical tail-tube surrounded by six kinked tail-fibers, which are oligomers of the viral protein gp17.	1.25972e-12
NZ_CP028538.1\|WP_040117149.1\|1029588_1030422_+\|hypothetical-protein	gnl\|CDD\|236768	PRK10819, PRK10819, transport protein TonB; Provisional.	0.000240718
NZ_CP028538.1\|WP_023305526.1\|1023237_1023468_+\|hypothetical-protein	gnl\|CDD\|368216	pfam04971, Phage_holin_2_1, Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	6.87301e-29
NZ_CP028538.1\|WP_045259856.1\|1026653_1027271_-\|phage-integrase	gnl\|CDD\|271192	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	3.13399e-19
NZ_CP028538.1\|WP_023303163.1\|1036084_1036756_-\|EAL-domain-containing-protein	gnl\|CDD\|225110	COG2200, Rtn, c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms].	3.63192e-29
NZ_CP028538.1\|WP_023305527.1\|1023448_1023988_+\|lysozyme	gnl\|CDD\|226295	COG3772, COG3772, Phage-related lysozyme (muraminidase) [General function prediction only].	2.68111e-56
NZ_CP028538.1\|WP_045259860.1\|1032811_1033852_+\|phage-capsid-E-family-protein	gnl\|CDD\|377147	pfam03864, Phage_cap_E, Phage major capsid protein E. Major capsid protein E is involved with the stabilisation of the condensed form of the DNA molecule in phage heads.	0.00924117
NZ_CP028538.1\|WP_045259863.1\|1037049_1038300_-\|integrase	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	9.14179e-36
NZ_CP028538.1\|WP_108168558.1\|1034176_1036042_+\|hypothetical-protein	gnl\|CDD\|378260	pfam09831, DUF2058, Uncharacterized protein conserved in bacteria (DUF2058). This domain, found in various prokaryotic proteins, has no known function.	0.000123017
NZ_CP028538.1\|WP_023305524.1\|1021775_1022693_-\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.08764e-81
NZ_CP028538.1\|WP_023305525.1\|1022689_1023052_-\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	8.47612e-11

>NZ_CP028538.1|WP_045259856.1|1026653_1027271_-|phage-integrase
MAISKGAKRTDGLESAEQVKIVVEEIAKKSQTVADLFLIGVETQLRGVDMRSWRWDELNIGSKVLRITQDKTKEAVEVELTETAREVLKARYNERGNNVYVFQNDSNRSKGKPISRSKIHAEIQYAVDKLKMRGLLPPDAVIAMHSARKTVATIAHNNNEDLEVISKMLGHRSTEHTRAYLGITQAKVDALRTKYSTGIKRGTHV
>NZ_CP028538.1|WP_023303152.1|1026203_1026575_+|hypothetical-protein
MLRVIMLIVSILALPETLGCSFIVFLFVNNWLSKQEAIAIARIIAVEMRSSGYIDSFELRVSRFGAKKFFSMFGEFYLNQFDPDTRERKYQGDVSLQGVGNVYCEFTYDHYKFTKCTLTAGVF
>NZ_CP028538.1|WP_032624792.1|1025452_1025731_+|hypothetical-protein
MYQDNTNSRGMVMTNKQLRIHYGFHGKHKEKIIEWDGCDQINTVLSALVEDLNIPTATQTVNLLEHGIDDVFFFDEVSKKWEEIPTKWLARA
>NZ_CP028538.1|WP_023305528.1|1023984_1024347_+|hypothetical-protein
MTIKAKLLALAVLLAFFVGTFYVGYLKGWYAHSEHVNSQAKAKQKKAEKAVAIGEQKAAAASAEGKVIYRTIYRDVVKYVNDPNHVKCDFDAHAVQLRQRALDAANSISGFDAGAVQGSE
>NZ_CP028538.1|WP_023305527.1|1023448_1023988_+|lysozyme
MASSKTKLSAAVLGLVLAGAPATVILDQFLNEKEGNSLTAYRDGGGIWTICRGATMVDGKPVVQGMKLTQAKCDQVNAIERNKALAWVDRNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRMNAGDRKGACEAIRWWIKDGGRDCRLTKGQKNGCYGQVERRDQESALACWGIDQ
>NZ_CP028538.1|WP_023305526.1|1023237_1023468_+|hypothetical-protein
MNNLSDVAAGLSYGTSIGSFGYWLLQLLDKVSPSQWAAIGVLASILFGLLTYLTNLYFKIKDDRRKEARGNGFQQD
>NZ_CP028538.1|WP_023305525.1|1022689_1023052_-|GtrA-family-protein
MLKLFSKYLTVGVLNTAIHWFVFAIGVYIFSVNQATANFLAFATAVTFSFFANAAFTFKSKPKVKGYFLFVTFMGLMSVLVGKLSDYYQIAPIITLVEFSLISLICGFFYSKHIVFREEK
>NZ_CP028538.1|WP_023305524.1|1021775_1022693_-|glycosyltransferase
MKISLVVPVFNEEDAIPIFYKTVREFEDLQQYEVEIVFINDGSKDATEAIINSIAISDPLVKPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLINKWVAGADMVLAKRTDRSTDGRLKRKTAEWFYKLHNKISNPQIEENVGDFRLMSREVVENIKLMPERNLFMKGVLSWVGGSTDVVEYARAERVAGNTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLLVAGLAFLYGTWMIIDTIAFGNPVRGYPSLLVSVLFLGGIQLIGIGVLGEYIGRIYIESKQRPKYLIKGKK
>NZ_CP028538.1|WP_023305523.1|1020309_1021779_-|hypothetical-protein
MKFIFCKRHLIYFIALIVLTIFYATLSRNILPSSDAVSVMLEGKDVASGNLGLAGWYLSTVSFYFTEVIWYALATKLTGYSSHQAYIIPALMYSCLVLIAFYLSREKLGSVWALIFSIGIPSAFASLNTLIPVIHIGTYVYTLISYILIEKYTNKKELKYLVAFILLATLTCFSDDISNYILIAPLFLSGLFFCVKNKSLYNLYVVMAVLIAYALAKAMQYYASISGLFILPGIPSPQFIDFDLIGKNLYLFTEGMLRYTGSFFFGKSPSEPEAIKSVILLIVFALFCTHTYKALRISYKISIVDMSLCVACLIMIPAFVLSNRPIDVWSIRYLVPFFIFAPIIIGRAKTTNGLIYYILAVFLVVFLAYGSGFSQRTDHSNDILNKLKTTLRENGLKDGYGSFWFASSLSIDGDLKVAPLDVNRVLNIFACNKWLSKNDWYSTGGNFIIIDDDQMRDIALKEVGNPVKVIKTGDKSIFIYNKNITYSCQ
>NZ_CP028538.1|WP_023305522.1|1018280_1020275_+|hypothetical-protein
MSVPNQTPYIIYNANGLTTVFPFEFYIINSGDIQVTINGTVITSGYTVSGVGNIGGGDVIFITPPASGSVVMLERVVPTYRLTDYQDNGDLLADTVNKDFDRLWMAIQRYGIHLGLALRRPLFGGPFDAEGYRIEKLADPVNAQDAVTKKYLESVSLAQVLRVPEASVGLVPSLDLRRNKLLAFNNSGDPIPVLPESGSASDVLIELAKPTGSSLIGYKYPSTGSVSRTVQDKLDDFVFLEDFGGKANDINVDNSLAFIRAFAESPRVRLRTPGVYYMKTRDVVLPANWHVEGSGFNTELKYPGTDTTFTIFTANGTGPEDANQIQGGVFRNIVISADVSLASAFVFRHLKHALWDRCFFYNAGTIMDNFHYIDYIFCQRWGSPFYGAATLNTEKHLSEMPRWLNCFSSSSPIDLIDTTDSVLANSIFYGGEFVVRQRYTAPGLLPGDKTYGFPIHINHCVMDAVRGSALDLDRLAYFTITGNLISAGRDLEKDGVLITNSVSGTFSDNVITYSGAFGLRAANLYQCNFGGNILNGNKTGGMSLSNSKQCTVSGGTMGTSYSYGGYYVQPVGFTDPANNCTDITLMGIQLDDDLSVKISIDTNPASRNRILACRGVPDTFYSGPTSARPSPVGMGFTYFDTTLGLQIQWNATAGKWQRSDGTIV
>NZ_CP028538.1|WP_040117149.1|1029588_1030422_+|hypothetical-protein
MTDIINSKVFSFTNTEDAFNECTRITNLKTGVTVSLSPTNKQLFVRIRHRFHNFVKKRGGKYYDNIDQLGESVGVKYDAASDGIKKLKAVGLISGTIKGRSYQWESVADLTPEDFLFERDINAMKRKTAPEWVDCLKHPVFGNAKEDVAPEVQEEKQQSVPEADPMCEFDDTPEEEAPAPEKVEPAPKPKPTKKPAARKAPDKQQTLSPFEFKTPRDERFDGITFNRLNDASDRFLVFQDYDLPYLVLFESQGKLTNPKAIEHLKMKRNLFERTGRL
>NZ_CP028538.1|WP_080347057.1|1030990_1031227_+|hypothetical-protein
MSPDEMGALQDILNSCPGAFWKPRKIKIFNVDSSNLHKWQILNFSSYEHYCGWLSVNHLNNLTRDFDTLFDTKEHYDS
>NZ_CP028538.1|WP_045259859.1|1031216_1031567_+|hypothetical-protein
MTLNTMDTVNIVNIVNTLINSFHDIWHLPALRLVNKAWCERTPSALLEAIQYTEEAITALEHWNAAVEHLVQMNGDTVTVDQAWRIANDMEELALAMEHITVELGELAIQIAEECA
>NZ_CP028538.1|WP_003862898.1|1032223_1032439_+|hypothetical-protein
MFLLNNRDRILKYKSEVIQVNPELIAKVAEMAGCTVEEIEKAVEQYFPSEDTPQLSMQERIAIKSKEIKQQ
>NZ_CP028538.1|WP_023303159.1|1032435_1032795_+|hypothetical-protein
MIVDLTELFPIRKSFTDVVSYATDSFAVVEGRVFDLPADIQCADVIGADGALYTSGDNAFVVVSDFVSAGDGKTVNVLRAPNVGSFVALKADNLNAANHAAAITTLESKGFVCRPFFTS
>NZ_CP028538.1|WP_045259860.1|1032811_1033852_+|phage-capsid-E-family-protein
MTKIVIGREMVDLAPIFQALPERNYLMNALDLFDGVGVQNPKVVVTQLLDDNYSLFNTPQSRYSSNHDTTARQNGKEYLVEIPWFAREDTFKPVDVQGKRVQGTDYEQTVTDLYTEYTGKHKIAYLRTRESYLARCLFKGEVYTPATDDLLISYAELFGVVPMTASVSAATAAQDFDAILDKVQAAAGGLAGQIERVIVFAKPAAFSQIRFSDSMSKAFQYVAPYDDRNLFYQRHELLPGVSTFSLPGSPVDFVKVTDTLILAQMPDDADMVAVPVFSKGSGSTNPYQNIYGAASGNFALIDAAPAEYYSWGYLSERGDAYHVMHENSALPVNHALGMQVKITITA
>NZ_CP028538.1|WP_023303161.1|1033983_1034184_+|hypothetical-protein
MELILKSNRGLHVRLSADDAEGLLKVSQLCELLEISYTGVRARIFRGETVEAAIHHFLDQKGGGDA
>NZ_CP028538.1|WP_108168558.1|1034176_1036042_+|hypothetical-protein
MLDINVASIKTTVSFVVDKQSLAEARKAGDDLKKYFEKIADPKIRFQAQKQRRQKARQQADDARFNDKPRDTKEMKAQRAAEKQKVRDEKANLKAKQQLQKRQEVAELRLRHAGLQISGIKGKYELDPKSQYEALRFIRQQTEEFAKGNLTSDRMNASIRERVTLLRREAAQQAKVTQAQRTQYAAAATKLKAQKGGNAPIVGGGVLGSLALTAGSLGVGQRIVDKGNDNLELVRMSERVKTNPNAIKTMVAWGQQHGVDSANTSKAVDNMKDVRERLAMTVNDAQMKKGEWKGGDGGITSIMNKFGWSKDQISKFQDSPLDFVQATVNEGQRRGMSQAQIGTLIESLGDDLMHYTDMFMNNGAEYNKTLKTLVESGQTLNDEQIRQVSAYGDLSVAMGNLMNGVDNQLFTGWMKGFADGGDDLVRKTKIITEAAGMLGEGLGNLSKEITGFVGEISSVVSDINKGLKERFPVWFAEKDKPAAQALYDGAVTGSANSAADWVQDKTGFDTRSVGHAVKDWLGIDDQPTGTAVEQYSLNGDSLPGGSLRDSAISSLTSTNSAPSYNLAPVFNLNLEASVPLTIASDSSRLADYVDFTAKASQAAFTQSLTLSALSGQSSTGG
>NZ_CP028538.1|WP_023303163.1|1036084_1036756_-|EAL-domain-containing-protein
MDTTFIADPIVSIDERLLGVELLTRFIASDGRPLHPEFVISSWDLDRKRLFLYEQCGNIATMQTWFERKNLFCTLNIDQKMAFLIRHDYILRQTFESMPFIKLELSEHFPGLDKGLKSPLLKSLSQGVNGLWLDDLGAGNANVVSLIEGYFEVVKIDRIFFNEQVKKPTFNQLIASIKKHCGKVIIEGIENREHLGILREVGVWGLQGYLFKSVPFKNVDLLL
>NZ_CP028538.1|WP_045259863.1|1037049_1038300_-|integrase
MKYKPDQYIISDSYGVYYVRISIPVWLRNAFGGRKTLVRSLKTSDLRVARRKRDVIADEFHHIRQIAEPPKPDSLQDTISYLKSVAKYAKAAPKASAPIIYQCPSLIKMLEIYLMHNADRLKMGTLSKTRKAVELFLNYLRKKDVELNDINRTTVTGWLDHLRETKAVQTVANYLSAMANIFDLASSRYQDAPPLESNVFRGHKLNTAQSRQSYEAFTEEDITKLISAFNKLGEDELRDVTTIAAYSGMRINEIASLKSDNICEVEGVLCFEVTEGKTRNAARLVPLHSAIRTMVLERCQKPHNGFLFYRASVTKREDGKRSSWHVNRFGRLKRDILPGQENKVFHSIRHLVAQTLDRGGVGRDKLTPVPEDRIALLLGHSRGETESFKTYSKNAASPVELQQYIELLRYSKIDNP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP028538_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP028538_2

1614814-1614927

Orphan

Consensus_repeat	Method
GCCGGGTAAACGCAGTGCCACCCGGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP028538_2

>merge|NZ_CP028538|2|1614814-1614927|CRISPRCasFinder
GCCGGGTAAACGCAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTAACGCTTACCGGGCCTACGAAGAGCCAACATGTACAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAA

>NZ_CP028538|2|2|1614814-1614927|CRISPRCasFinder
GCCGGGTAAACGCAGTGCCACCCGGCAA	AAAGCCCGGTGGCGCTAACGCTTACCGGGCCTACGAAGAGCCAACATGTACAAAGTAG
GCCGGGTAAACGCAGTGCCACCCGGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP028538.1\|WP_108168579.1\|1622559_1623675_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP028538.1\|WP_023305791.1\|1611952_1612954_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|236710
NZ_CP028538.1\|WP_023305792.1\|1612992_1614711_-\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP028538.1\|WP_023305790.1\|1610505_1611942_-\|DUF2867-domain-containing-protein	unknown	unknown	gnl\|CDD\|187556
NZ_CP028538.1\|WP_023305788.1\|1602997_1603795_+\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|224900
NZ_CP028538.1\|WP_006174393.1\|1626171_1626492_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP028538.1\|WP_023299704.1\|1606853_1607294_+\|type-III-secretion-system-invasion-protein-IagB	unknown	unknown	gnl\|CDD\|185228
NZ_CP028538.1\|WP_022647600.1\|1609399_1610413_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP028538.1\|WP_026080729.1\|1618801_1619497_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP028538.1\|WP_022647599.1\|1607428_1609255_+\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|381595
NZ_CP028538.1\|WP_022647595.1\|1602515_1603001_+\|type-II-secretion-system-protein-M	unknown	unknown	gnl\|CDD\|377391
NZ_CP028538.1\|WP_023299708.1\|1615928_1617581_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP028538.1\|WP_023305789.1\|1604048_1606751_+\|chitinase	unknown	unknown	gnl\|CDD\|214753
NZ_CP028538.1\|WP_023299707.1\|1614949_1615918_-\|NADH-oxidoreductase	unknown	unknown	gnl\|CDD\|236735
NZ_CP028538.1\|WP_023305795.1\|1623671_1625612_+\|MacB-family-efflux-pump-subunit	unknown	unknown	gnl\|CDD\|182528
NZ_CP028538.1\|WP_023299710.1\|1621443_1622400_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|377343
NZ_CP028538.1\|WP_023305787.1\|1601385_1602519_+\|type-II-secretion-system-protein-L	unknown	unknown	gnl\|CDD\|273768
NZ_CP028538.1\|WP_023299709.1\|1619788_1621447_+\|DUF2813-domain-containing-protein	unknown	unknown	gnl\|CDD\|226121
NZ_CP028538.1\|WP_022647606.1\|1617725_1618625_-\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP028538.1\|WP_006174390.1\|1625682_1625904_-\|cold-shock-domain-protein-CspD	unknown	unknown	gnl\|CDD\|184960

Protein	Function_ID	Function_description	E-value
NZ_CP028538.1\|WP_108168579.1\|1622559_1623675_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP028538.1\|WP_023305791.1\|1611952_1612954_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|236710	PRK10534, PRK10534, L-threonine aldolase; Provisional.	0
NZ_CP028538.1\|WP_023305792.1\|1612992_1614711_-\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP028538.1\|WP_023305790.1\|1610505_1611942_-\|DUF2867-domain-containing-protein	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.0648e-140
NZ_CP028538.1\|WP_023305788.1\|1602997_1603795_+\|prepilin-peptidase	gnl\|CDD\|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	1.98468e-41
NZ_CP028538.1\|WP_006174393.1\|1626171_1626492_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	9.90991e-48
NZ_CP028538.1\|WP_023299704.1\|1606853_1607294_+\|type-III-secretion-system-invasion-protein-IagB	gnl\|CDD\|185228	PRK15328, PRK15328, type III secretion system invasion protein IagB.	1.24199e-87
NZ_CP028538.1\|WP_022647600.1\|1609399_1610413_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	1.04343e-52
NZ_CP028538.1\|WP_026080729.1\|1618801_1619497_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	1.82782e-146
NZ_CP028538.1\|WP_022647599.1\|1607428_1609255_+\|PKD-domain-containing-protein	gnl\|CDD\|381595	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.	4.22012e-72
NZ_CP028538.1\|WP_022647595.1\|1602515_1603001_+\|type-II-secretion-system-protein-M	gnl\|CDD\|377391	pfam04612, T2SSM, Type II secretion system (T2SS), protein M. This family of membrane proteins consists of Type II secretion system protein M sequences from several Gram-negative (diderm) bacteria. The precise function of these proteins is unknown, though in Vibrio cholerae, the T2SM (EpsM) protein interacts with the T2SL (EpsL) protein, and also forms homodimers.	1.47125e-27
NZ_CP028538.1\|WP_023299708.1\|1615928_1617581_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP028538.1\|WP_023305789.1\|1604048_1606751_+\|chitinase	gnl\|CDD\|214753	smart00636, Glyco_18, Glyco_18 domain.	7.43979e-123
NZ_CP028538.1\|WP_023299707.1\|1614949_1615918_-\|NADH-oxidoreductase	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
NZ_CP028538.1\|WP_023305795.1\|1623671_1625612_+\|MacB-family-efflux-pump-subunit	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP028538.1\|WP_023299710.1\|1621443_1622400_-\|DUF535-domain-containing-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	6.56154e-124
NZ_CP028538.1\|WP_023305787.1\|1601385_1602519_+\|type-II-secretion-system-protein-L	gnl\|CDD\|273768	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L. This model represents GspL, protein L of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking].	2.52707e-40
NZ_CP028538.1\|WP_023299709.1\|1619788_1621447_+\|DUF2813-domain-containing-protein	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP028538.1\|WP_022647606.1\|1617725_1618625_-\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	2.90935e-117
NZ_CP028538.1\|WP_006174390.1\|1625682_1625904_-\|cold-shock-domain-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	1.04122e-47

>NZ_CP028538.1|WP_023305792.1|1612992_1614711_-|ubiquinone-dependent-pyruvate-dehydrogenase
MKQTVAAYIAKTLEQAGVKRIWGVTGDSLNGLSDSLNKMKTIEWMPTRHEEVAAFAAGAEAQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAILNRGVSVVVLPGDVALKAAPETATTHWYSAPQPTITPADEELKKLAQLLRYSSNIALMCGSGCAGAHKELVEFAAKLKAPVVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQFPYRAFYPTDAKIIQIDINPGSIGAHSKVDMALIGDIKSTLAALLPLLEEKTDRKFLDKALSDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFADDDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAKATAPERQVVAMCGDGGFSMLMGDFLSVAQMKLPLKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFAIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELAKTNWLR
>NZ_CP028538.1|WP_023305791.1|1611952_1612954_-|low-specificity-L-threonine-aldolase
MIDLRSDTVTRPGRAMLEEMMAAPVGDDVYGDDPTVNELQRYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAPDGTLPLDKVAAKIKADDIHFARTKLLSLENTHNGKVLPREYLKAAWDFTRERKLGLHVDGARIFNAVVEYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGSADYIRRANRWRKMTGGGMRQAGILAAAGLYALKNNVSRLKDDHDNAAWMAAQLHEIGADVMRHDTNMLFVRVGNEHAAALGEFMKARGVLINASPVVRLVMHLDVNREQLTEVVKHWQAFLQR
>NZ_CP028538.1|WP_023305790.1|1610505_1611942_-|DUF2867-domain-containing-protein
MPQRILVLGASGYIGQHLTTALSQQGHQVLAVARNTERLQKLHLPGVTCHNVDLNWPKALPALLEGVDTLYYLVHSMGEGGDFIAHERQVAMNVRDTLLQTPVKQVIFLSSLQAPENEQSDHLRARQLTAETLRSARIPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPAAAHRVLEAAGPEVLSYQAQFEHFMRVSGRRRWLVPVPFPTRWISVWFLNVITSVPPTTAKALIQGLKHDLLADDRELRALIPQELIPFDDAVRNTLKEEEKLVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVKTTASLSALWDVVNQIGGKERYFFGNILWQTRGSLDLLVGHRLAKGRPAAPYLNVGDTVDSWKVIIVEPEKQLALLFGMKAPGLGRLCFTLKDKGVHRELDVRAWWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIAQLAEEKRESN
>NZ_CP028538.1|WP_022647600.1|1609399_1610413_-|NAD(P)-dependent-oxidoreductase
MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLQKMGAEFVHADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQEAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIQEDFRPARFACEFARSKAAGEEVIDLLAQSNPHTRFTVLRPQSLFGPHDKVFIPRLAQMMHHYGSVLLPRGGDALVDMTYYENAVHAMWLASQPECDKLVSGRAYNITNGEPCTLRSIVQRLIDELKIDCRIRSVPYPMLDMIARSMERFGSKSAKEPALTHYGVSKLNFDFTLDISRAENELGYKPIISLDEGIVRTAAWLRDHGKLHR
>NZ_CP028538.1|WP_022647599.1|1607428_1609255_+|PKD-domain-containing-protein
MNKRTLLSVLVAGACVAPFMAQAASLQATTGEPYTMKASDLAKKEHELTNFPLMASVKETIQTLDNAQVELIEPGRAANPDNVKRVEGIVKASDWEYLFPLRAQAYTYSNFLKAVGKFPALCKTYNDGRDSDAICRKELATMFAHFAQETGGHESWRPEAEWRQALVHVREMGWSEGQKGGYNGECNPDVWQGQTWPCGKDKDGDFLSYFGRGAKQLSYNYNYGPFSEAMYGDVRTLLDKPELVADTWLNLASAIFFFAYPQPPKPSMLQVIDGTWQPNDHDKANGLVPGFGVTTQIINGGVECGGPTEIAQSQNRIKYYKEFANYLKVPVPANEVLGCANMKQFDEGGAGALKIYWEQDWGWSADTPDGKTYSCQLVGYQTPFSAFKEGDYSKCVQKFYNVNIVNDDGSSVTPDETPVTPTPTPSEDVTPAPTPAPVPDETPVEPVAVNHAPVAQIAGPIGAVEAGAQVSLSAEGSTDADGNKLTYTWRSQDGQTVTGEDKAVVTFKAPESATAQQYEVSLTVSDGELSSTTSYLLNVKAKAATPSGEDTSYPAWSANSKYNAGDIVNNHGKLFQCKPFPYSGWCNSAPTYYEPGAGLAWAEAWTAL
>NZ_CP028538.1|WP_023299704.1|1606853_1607294_+|type-III-secretion-system-invasion-protein-IagB
MKKLILLLLIISQGALANCWDKAARYYHVDPYLLYAIANVESGMNPYAVGKNRDGTRDVGLMQINSSHFTALESRGIDEYRLMTEPCTSIMVGASILSGMIRVYGYNWEAVGAYNAGLKKENYPQRMKYAHKVWAKYQQLKLAARD
>NZ_CP028538.1|WP_023305789.1|1604048_1606751_+|chitinase
MKFMKPKYLALFIAAATSSAFAAAPGTPSITSGNDKFALVEVDQAAQDYNNLIKVHKEGVDVKVEWNVWSGDAPTSAKVLLDGKTVWTGAGSAAGSATFKVKKGGRYQEQVELCNDSGCTKSASKLIIVADTDGSHLLPLNTPLLENNKAFAQHTDKVVGAYFPEWGVYDRNFSADKIPVANINHLLYGFIPICGGDGINDSAKSSGALESLKRACAGRQDYTVAIHDPWAALQKPQKGVSNWDDPYKGNYGQLMAMKKAHPDLKILPSIGGWTLSDPFYQMDNKVLRDRFVASVKDFLTTWKVFDGVDIDWEFPGGGGENAKLGNPQTDKATYTALMHDLRQMLNELSAETGRTYELTTAIGAGKDKIEDVDYNTTQQYLDHIFLMSYDFYGAWSNTDLGHQTALYGASWKPDTNYTTDNAVKAMLEQGVKPGKIVVGAGMYGRGWTGVHGYTGDNPFTGTATGPIKGTWENGIVDYRQIVNQMLGKPGWEYKYDEAAEAPYVFNKSTGELVTYDNARSVMAKGKYVLNKNLGGLFAWSIESDNGDILNAMNESLLGGSSIPDLPVETNHAPMASAADQNVTGPATVTLDGSASSDQDDDALTYKWTQVSGPSVTIANSTKAKASFSVPAVTSDQNLVFRLTVTDAKGLSNAVDVQVVNKAPKANQAPVINAMEAVTVQSGEAISLHAQASDPDGDALTYSWSVPADMNATGTDSANVRITAPEVHNTSSYTLSVIVTDGKTSVQSDVQVTVEPKPADEVTPPADDVTPPADDVTPPADDVTPPADDTAGSCDAPVDANASKYAAWDASKIYNNGDTVSFDHLVWKAKYWTQGNQPGFGMDAWELVSNVKMNWRSDLVYNGGDTTTYEGNVYRAKWWTRGDNPANSDVWVKEGASTDCK
>NZ_CP028538.1|WP_023305788.1|1602997_1603795_+|prepilin-peptidase
MNTFTLMREACPLGFPMMSAILGGIMGSFLGVVAERVPGMVMDEEGSGNLLFPASHCPVCQHTLAAWENIPLLSWLLLRGRCHQCGSAIPLRLFLVELFSALFFGITAWCMPDVQALFSLWLLAAFLLPLAMIDWQHQLLPDCLTQPLLWAGLVLHAIDHTLPLRAALFGAVAGYLSLWLLYWAFRLIAGREGLGYGDFKLLAALGAWCGWQALPSIELAAALSGIVGYFAVNNLNKNNLTISFGPYLAFSGIVVFISQQFAFTF
>NZ_CP028538.1|WP_022647595.1|1602515_1603001_+|type-II-secretion-system-protein-M
MKERIAQLKSRYQNYSAREKIILKICAVAIVGAAVYYTGVIPLDNMIQNSKSTLKRQKETLNWMRSEIDKNHLQVQLVKTNNPRTVVENSAHEINLSLTDVRQEGQTLSFVVNRVNVYELKSWLREINQTSGVTLQKINLTPVDHLSDVKAQVQLTWSKSA
>NZ_CP028538.1|WP_023305787.1|1601385_1602519_+|type-II-secretion-system-protein-L
MKQVLFVRPDSREGGKIMCCESGSERVEVLDSLEMLAEHPLATRVCLLLPASDMIFRHFTLPKKVASQAMAFSWMAEETLIGDVDNLHWTVLYKKGADVDAVAIDADRLRAALTRCHEAGLNVIQALPDAWLLPVAAGGSTLVAQDKGYWLRLSPHVAGEMEGTLLPLLMQKAGDGEVCCYGDAPADVHVDVQHAWQHPLVLIQPQWKTCRVNLLHGEFSLKAGHGQAAKSMKAAMIAAGLLSVGLLLGPRIAMGWMLVQQENRVQQEIVQVYQHHFPSMRQQTNIKYHFGQSLKKQSKGFFLQLEELEKARQSVPAMEIDLLEYDAQQNTLTLSVSAQSQPALQAFVNQTSENFDFTLQPVSTTEPYTAMIAGKHK
>NZ_CP028538.1|WP_023299707.1|1614949_1615918_-|NADH-oxidoreductase
MTMPTSQCPWRMQVHHIQQETPDVWTLSLLCHDYYPYRAGQYALVSVRNSADTLRAYTISSTPGVSEYITLTVRRIDDGAGSRWLTRDVKRGDYIWLSDAQGEFTCDDKKEDKFLLLAAGCGVTPIMSMRRWLAKYRPQADVQVIFSVRSPEDVIFAEEWRNYPVTLVAEHNATHGFVAGRLSREMLQSVPDIADRTVMTCGPAPYMEIVEKEVKALGVTRFFKEQFFTPVAAAATSGMKFTKLQPAQTFFGRVGTTLLEALESNNVPVAAACRAGVCGCCKTKVVSGEYTVTSTMTLTDAEIAEGYVLACSCHPQGDLVLA
>NZ_CP028538.1|WP_023299708.1|1615928_1617581_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAFKAREYGLVDHYVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLNADASARVDNPMAELQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPSDMNALLECSMEIGQMNFKVMSILDAGETSTYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLKQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRETLLGAADSLIDLVSREKLRHIFLIGGCDGARGERNYFTDFATRVPEDCLILTLACGKYRFNKLDFGNIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVTNIVTGPTAPGFLTPDLLAILNEKFGLRSVTNVEDDMKQLLSA
>NZ_CP028538.1|WP_022647606.1|1617725_1618625_-|lysine-exporter-LysO-family-protein
MFSGLLIILLPLIVGYLIPLRHESALKLINRFLSWIVYVILFFMGISLAFLDNLATNLLSILHYSAVTVVVILLCNIAALFWLERTIPWKNHHHQEKLPSRIAMALESLKLCGVVVLGFLLGLTGWAFLQHATEASEYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMMVAVIVVASSMAGGVINAFILDLPLKTSLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRSGGLEMVPAAIVHGFILSLLVPILMAFFSA
>NZ_CP028538.1|WP_026080729.1|1618801_1619497_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKDIIGYIIAQVIGGIIAAAVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKYAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLFWVMPIIGGILGGVLYRTLLEKRD
>NZ_CP028538.1|WP_023299709.1|1619788_1621447_+|DUF2813-domain-containing-protein
MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEENLYHFVHDDFWFPPGDVNGREKHLHIILTFRESEPGRHRVRRFRPMSPCWVPCEDGFQRIFYRLEGEMAQNDGVLTLREFLDEKGNPIPLDNIDELARHLIRLSPVLRLRDARFMRRIRNGTVPNMPEVEVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTGQARHRLMRRRSHDEQRSWRYLDIINRMIDRPSGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLHPIMLSVAWHLLNLLPLQRVTTTNSGELLSLTPVEYVCRLVRESSRVTAYRLGPGGLNAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREEEREHLTTLPAMDMEHFMYRQGFDDVFHRVAMIPVDVPMNMRRVIAKAIHRSSKPDLAIEVATEAGRRGVESVPTLLRKMFSRVLWLARGRAD
>NZ_CP028538.1|WP_023299710.1|1621443_1622400_-|DUF535-domain-containing-protein
MSSIVDTPYSTLSQPKSGWQLFKSLASGSLTPGLAWQNPAYRRKFMLRSLATPFTTARLLGNLAKQPRLMQILRVQPGLPCRLHRPWLTVNMGRQNTLDALDNHYQMMSRHLPASLLNGYLSSQGITLVTLTGKEEQQFSVRLSADAFLDKEGEATLTFCDHQNTVLAELTFTLCKYQGNSTLFIGGMQGAKAHVPHEHIQLATKACHGLFPKRLLVEAVMTLAGAFPVEQILAVSNATHIYRSWRYRKKKEGKLLADYDSFWRSLGGQQQENGNFALPLTMPRKPMEEIASKKRSEYRRRYILLDSLHQQVSQATAR
>NZ_CP028538.1|WP_108168579.1|1622559_1623675_+|macrolide-transporter-subunit-MacA
MNLKGKRRKLFLLLAVVVLAGGFWLWKVLNAPVPQYQTLIVRPGELQQNVLATGKLDALRKVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAQNQIREVEATLMELRAQRAQAQAERNLAQVTLSRQQALAKTQAISKQDLDTAATELAVKQAQIGTIDAQIKRNQASQDTAKTNLDYTQIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPQTRYEGMLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQLTGVKNVLTVPLSALGESAGDNRYKVKVLRNGETREREVVIGARNDTDVVVVKGLEEGEEVVTSESLPGAAQ
>NZ_CP028538.1|WP_023305795.1|1623671_1625612_+|MacB-family-efflux-pump-subunit
MTALLELNDIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLSAAQNVEVPAVYAGVERKKRLERAKALLTRLGLAERVDYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIHDGELVSNPPPRQSRAAAAKEALPAATGWGQFSSGFREALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRYGNIDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKTNVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSGLAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLFLPGWEIGFSPMAILTAFLCSTFTGILFGWLPARNAARLDPVDALARE
>NZ_CP028538.1|WP_006174390.1|1625682_1625904_-|cold-shock-domain-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASLIVPVEAEAVA
>NZ_CP028538.1|WP_006174393.1|1626171_1626492_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA

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Crispr_ID: NZ_CP028538_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP028538_3

2828122-2828246

Orphan

Consensus_repeat	Method
GTTGGTTTTCCCCATACCTGCATGCTGGTTTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP028538_3

>merge|NZ_CP028538|3|2828122-2828246|CRISPRCasFinder
GCGGAATTTCCACATGACTGCTCGTTGGTTTTCCCCATACCTGCATGCTGGTTTTCCGCATCACTGTTTGCGGAAATTCCGCATCCTTGTTTGTTGGTTTTCCCCATACCTGCATGCTGGTTTTC

>NZ_CP028538|3|3|2828122-2828246|CRISPRCasFinder
GCGGAATTTCCACATGACTGCTCGTTGGTTTTC	CCCATACCTGCATGCTGGTTTTCCGCATCACTGTTTGCGGAAATTCCGCATCCTTGTTT
GTTGGTTTTCCCCATACCTGCATGCTGGTTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP028538.1\|WP_108168680.1\|2831203_2831614_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_108168673.1\|2821126_2821462_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_032645228.1\|2828750_2828969_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP028538.1\|WP_015570940.1\|2824076_2824562_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379158
NZ_CP028538.1\|WP_044901830.1\|2833432_2833855_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_108168676.1\|2822010_2822640_-\|endolysin	unknown	unknown	gnl\|CDD\|225720
NZ_CP028538.1\|WP_108168679.1\|2828551_2828749_-\|DUF4222-domain-containing-protein	unknown	unknown	gnl\|CDD\|372855
NZ_CP028538.1\|WP_006811082.1\|2831800_2832307_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_108168677.1\|2824857_2825640_-\|antitermination-protein	unknown	unknown	gnl\|CDD\|367572
NZ_CP028538.1\|WP_105322835.1\|2823802_2824030_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_017384395.1\|2830204_2830405_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_045338762.1\|2822639_2822918_-\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|368449
NZ_CP028538.1\|WP_108168681.1\|2832319_2833180_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378443
NZ_CP028538.1\|WP_108168675.1\|2821730_2822003_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_108168674.1\|2821579_2821780_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_023150206.1\|2822907_2823297_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374892
NZ_CP028538.1\|WP_032621744.1\|2825643_2827515_-\|DNA-replication-protein	unknown	unknown	gnl\|CDD\|238542
NZ_CP028538.1\|WP_006811084.1\|2833179_2833431_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379576
NZ_CP028538.1\|WP_016240231.1\|2831019_2831223_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP028538.1\|WP_017384394.1\|2829083_2829791_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484

Protein	Function_ID	Function_description	E-value
NZ_CP028538.1\|WP_017384394.1\|2829083_2829791_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	6.58735e-32
NZ_CP028538.1\|WP_006811084.1\|2833179_2833431_+\|hypothetical-protein	gnl\|CDD\|379576	pfam14354, Lar_restr_allev, Restriction alleviation protein Lar. This family includes the restriction alleviation protein Lar encoded by the Rac prophage of Escherichia coli. This protein modulates the activity of the Escherichia coli restriction and modification system.	2.11365e-06
NZ_CP028538.1\|WP_032645228.1\|2828750_2828969_-\|hypothetical-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	1.21646e-13
NZ_CP028538.1\|WP_015570940.1\|2824076_2824562_-\|HNH-endonuclease	gnl\|CDD\|379158	pfam13392, HNH_3, HNH endonuclease. This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.	2.46453e-10
NZ_CP028538.1\|WP_032621744.1\|2825643_2827515_-\|DNA-replication-protein	gnl\|CDD\|238542	cd01122, GP4d_helicase, GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.	9.79117e-23
NZ_CP028538.1\|WP_108168676.1\|2822010_2822640_-\|endolysin	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	3.38082e-68
NZ_CP028538.1\|WP_108168679.1\|2828551_2828749_-\|DUF4222-domain-containing-protein	gnl\|CDD\|372855	pfam13973, DUF4222, Domain of unknown function (DUF4222). This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.	8.33788e-13
NZ_CP028538.1\|WP_108168681.1\|2832319_2833180_+\|hypothetical-protein	gnl\|CDD\|378443	pfam10543, ORF6N, ORF6N domain. This domain was identified by Iyer and colleagues.	2.39066e-25
NZ_CP028538.1\|WP_108168677.1\|2824857_2825640_-\|antitermination-protein	gnl\|CDD\|367572	pfam03589, Antiterm, Antitermination protein.	8.94328e-28
NZ_CP028538.1\|WP_045338762.1\|2822639_2822918_-\|phage-holin-family-protein	gnl\|CDD\|368449	pfam05449, Phage_holin_3_7, Putative 3TM holin, Phage_holin_3. This is a family of putative proteobacterial phage three-transmembrane-domain holins.	5.18901e-19
NZ_CP028538.1\|WP_023150206.1\|2822907_2823297_-\|hypothetical-protein	gnl\|CDD\|374892	pfam16931, Phage_holin_8, Putative phage holin.	3.38433e-34

>NZ_CP028538.1|WP_032621744.1|2825643_2827515_-|DNA-replication-protein
MSPAELSEKLWDNAERVAKFLLPKGHLEGKEWCAGNTNGDSGKSLKVNIGGKKSWADFASGDSGDLLDLWVLVRNCQLHDAMREAKEFLGLKDDDHHFEAKKKTFSRPTKKGVKSASKCYDYLASRGITRETADRFKVTDAVVWYHDENREVPAVAFPYIRNGELLQVKRIGTERPNGKKLIMAEADCEPCLFGWQALDKNTRLVVLCEGEIDCMTFTQLGYDALSVPFGGGKGAKQQWIEYEYHNLDRFQEIWLCLDNDDVGREAAKEIARRLGEHRCRMVELPHKDINDCLMNGMDSDSILEYMERAKFFDPDELCSAGDLLQETIEAFEHRDTGLFTSPWASLNNNFKFRAGELTLVNGVNGHGKTELVGHIAIDAMSQGVRTCIASLELKPGKMLARLTRQTICTSSPKREEIIMTNEWFSDRLWVFKLTGTAKADRLLEIFAYARRRYGIELFVIDNLAKCGLDEEDYTGQKDFIDTLCDFKNEHNCHVLLVTHARKTNDSAPTGKMDVKGTGALTDMPDNVMAVWRNIPRELAQRKADRMGYESLDKDEQAAINLPASMIRLLKQREGEGWIGDIGANFDSRSHQFLEGEKKPFNYLVGKPQSELDLEWEASNVTRV
>NZ_CP028538.1|WP_108168677.1|2824857_2825640_-|antitermination-protein
MELEASLKHFSPQGMHISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISKTDEQLAVQALALYAMETAPKNVRKAAGGHFGWCMQMLAQFAFSDYSRSAATSVTCHSCCGTGFISGHEDVIKYPGIFDADGAEVVAPKIKNELVKRVCETCGGKKVILARCRCGGKGEVLDRKATKERGAPVFKTCERCSGNGFSAISSATVHRAILKRLPDLHQSSWSRNWKPFYEMLVDTLRQGERHAAVEFEKATTY
>NZ_CP028538.1|WP_015570940.1|2824076_2824562_-|HNH-endonuclease
MSITQERLKEVLKYDPLTGLFVWIKRTNSRSTPGKIAGNADTYGYIQIMIDKKLIFAHRLAFLYMDGALPPADKCVDHINGNPKDNRWDNLRIVTQFVNQQNRHKVRKGAKSKLIGANWCKARGVWRSAIRINGQRKELGSFQTAELAHEAYMKAKAEMCR
>NZ_CP028538.1|WP_105322835.1|2823802_2824030_+|hypothetical-protein
MIVKAGVEPASIGALPIGLRAPCGYLSRIFTAKLFPSSPLSFITMGIALPRQGSVPGLTGMSSHTQSDFRCVETK
>NZ_CP028538.1|WP_023150206.1|2822907_2823297_-|hypothetical-protein
MSDPLTGTGAVLGGGLLGSVLYGVFTHTDFGVVFGAFGGAVFYVATAANLTRARLAAYFLTSFIVGVLGAGFVGSWLNAASSYEKPLDALGAVILSALCIKILTFLNNQDLNTLFGFFSRLRGGGGNGN
>NZ_CP028538.1|WP_045338762.1|2822639_2822918_-|phage-holin-family-protein
MVIDPSAVFNAFICAAIVIVLMFYQRHGARHRPFISVLAYITVLVYAAIPLQFIFGLYRDSSWLVVVANILIFAAILKVRGNMARLVDSLRH
>NZ_CP028538.1|WP_108168676.1|2822010_2822640_-|endolysin
MNQTQFQRAAGISAGLAARWFPHIDAAMKEYGITAPLDQAMFIAQMGHESTRFTRLVENLNYAAENLVLTFGSHRITPQQAAALGRTAAHPANQKAIANLVYGGEWGKEHLGNQSAGHGWKYRGRGLKQITGLSNYRSCGQALKLDLVTHPELLEQDEYAARSAAWFYSSRGCLLHSGNVERVTLLINGGRNGLDKRRALFNLAKSVLV
>NZ_CP028538.1|WP_108168675.1|2821730_2822003_-|hypothetical-protein
MSIIEMILGGIAALVAVAFSGFVAGNIRGSGKAEAKARQQRTEENAAAAVAAAERKAEVTKEASNVQQTVNHMPDDVVDRELRDNWTRKG
>NZ_CP028538.1|WP_108168674.1|2821579_2821780_-|hypothetical-protein
MTLLIASCGTTGPVRVEVVDTACDWVKPIYGTEHDWDVLDRQTKKDILAHNKAWQENCHKQNKIIP
>NZ_CP028538.1|WP_108168673.1|2821126_2821462_-|hypothetical-protein
MTDFGIIRNPLTIIAVFAGLVEVSATTVLPFIHDVSLQSRFLWFLMFFPTMLVVMFFGVLVFKPKALYAPKDYREDKSFIDMHSGQRVELGGAKIEHSKPVKIKIGDRLWS
>NZ_CP028538.1|WP_108168679.1|2828551_2828749_-|DUF4222-domain-containing-protein
MSHSITTENQIKPLDIDYRDPHGVIVHVTGWNRDKQQVYFTRQNYPHECMQPVWKFQNYFRRVGE
>NZ_CP028538.1|WP_032645228.1|2828750_2828969_-|hypothetical-protein
MKSAIERAIDAAGGVNALARAIGVKQPSVSRWRKVGVVGVEHVPDVAAFTGIPAHELRPDKPKLFPHPGNEV
>NZ_CP028538.1|WP_017384394.1|2829083_2829791_+|helix-turn-helix-transcriptional-regulator
MQERTLKTLADRLNYAMHEMGMSQGQLAKAANMAQPTIWRITSGNARGTTKIVEIANALGVRSEWLSNGTGPMRGDDQQPPPPMNNKKDPAIFRVDVLDLTVSAGPGIINSEFVEVLRSVEYSVEDARQMFNGRKQEQIRIINVRGDSMSGTIEPGDLLFVDISVQHFDGDGIYAFIYDDTSHVKRLQKMKDKLLVISDNHTYLPWDPIEKEEMNKIFIFGKVIGSMPQTYRKHG
>NZ_CP028538.1|WP_017384395.1|2830204_2830405_+|hypothetical-protein
MSQKIKTFKGLSIHPCDAFKNMSLIVEAASLLSAVDDDEYREISDILLAFVCNYANEAHKNEWDKR
>NZ_CP028538.1|WP_016240231.1|2831019_2831223_+|hypothetical-protein
MLSKDSSLETAKNTADNLYQLMELINSNIIDMDIEQIISLSGLCLDLSAQVSMWMDSEFERREKQRN
>NZ_CP028538.1|WP_108168680.1|2831203_2831614_+|hypothetical-protein
MKNNVIETYRRRILKAALLRHQRKTGSNCLVIKLNKGGINTVELTEILLDGLLRKFERLAISEYGNVEGVKAIKGIYSSAVDVNGSGEFLTDSGKELIDELISELVEFVKKQKVEAPKTEGNEMGGSGGTDSNTNS
>NZ_CP028538.1|WP_006811082.1|2831800_2832307_+|hypothetical-protein
MTDFEKDNVKQLVARLKEIQKQSDVTIPGWMLDENRYGKGSLTLEEQHEWAQTVVQSMRGTVALLYLISCENRWGLRDGQYQFKTEEFTFGLTRELIENLLIKHVECALIEHKPEERYLAVYQFYYANDQRLKEVGHSWFAEFLDEIFVDLAAQLRTGKTMPANHVLH
>NZ_CP028538.1|WP_108168681.1|2832319_2833180_+|hypothetical-protein
MAMKAELAPVAARDLQIIEYRGQRVVTTEQLAAGYGATEQMITNNFNRNKSRFVEGKHYFKLSGGDVEILRNSFSGLQISSKARTLTLWTERGAANHAKILETDQSWEFYDDMAEFYFTRRASIATPATPLTLSRKELALMVIEAEERAEAAALETRTLSATVESLEKHFTKGMTIPAFSKALNGVNINKMMWWASEHGWVFNEQRDPEKDPRWRVASYARDKYLTEDQTQITPHGKDAFTKFTPVLLEKGCHRLYQLYMKGELPMKKTWNGEYSHDKAIYSPEAK
>NZ_CP028538.1|WP_006811084.1|2833179_2833431_+|hypothetical-protein
MELLPCPLCGNDEIDFDSVLYEGEPMFVVRCDCCSVSLAPQARDMAAAIWNQRAPRPKEATDSYQILEHPSVGRFQIIKPEGF
>NZ_CP028538.1|WP_044901830.1|2833432_2833855_+|hypothetical-protein
MNNDIWNPAGSIELAHRQALTCVCDAYLFHLVSLHRRPVYRHQYGDISLNQTALQGFIDSYLADKGWSMERRRAHYINILDLIRYMGRKNSDFIDWGTVPTLTPRGIRWLNACFSRLGDMVNSYGGWEGYITATKKGAGQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

985330 : 1027271

uncultured_Caudovirales_phage(30.0%)

integrase

attL 995071:995085|attR 1031968:1031982

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015571369.1\|985330_986434_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.0e-59	39.9
WP_023305491.1\|986445_987699_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.2e-97	46.6
WP_023305492.1\|988039_989212_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	1.6e-111	50.3
WP_000189281.1\|989208_989397_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_108168557.1\|989393_990779_-	hypothetical protein	Q3LZN8	Bacteriophage	3.2e-212	74.0
WP_023305494.1\|990929_991232_-	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	8.8e-27	68.2
WP_023305495.1\|991232_991472_-	hypothetical protein	A0A1V0E5L1	Salmonella_phage	1.1e-32	88.3
WP_023305496.1\|991464_991683_-	hypothetical protein	NA	NA	NA	NA
WP_032670916.1\|991748_992507_-	DNA-binding protein	NA	NA	NA	NA
WP_023305498.1\|992563_994630_-	hypothetical protein	Q775A3	Bordetella_phage	5.1e-275	68.1
WP_023305499.1\|994707_995256_-	DUF2815 domain-containing protein	Q775A5	Bordetella_phage	7.6e-69	67.6
995071:995085	attL	NA	NA	NA	NA
WP_023305500.1\|995270_996572_-	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	1.3e-135	57.1
WP_023305501.1\|996574_997468_-	hypothetical protein	NA	NA	NA	NA
WP_023305504.1\|998151_998781_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.4e-34	41.7
WP_023305505.1\|998890_999115_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_057059698.1\|999118_1001287_+	replication protein	B6SCY1	Bacteriophage	6.8e-169	70.9
WP_015571352.1\|1001597_1001873_+	hypothetical protein	NA	NA	NA	NA
WP_023305507.1\|1002150_1002570_+	hypothetical protein	NA	NA	NA	NA
WP_023305508.1\|1002584_1002815_+	hypothetical protein	NA	NA	NA	NA
WP_023305509.1\|1002818_1004444_+	hypothetical protein	A0A2H4J3N6	uncultured_Caudovirales_phage	1.2e-173	58.8
WP_023305510.1\|1004440_1004674_+	hypothetical protein	NA	NA	NA	NA
WP_023305511.1\|1004660_1005497_+	hypothetical protein	A0A2H4JEQ5	uncultured_Caudovirales_phage	4.3e-47	43.1
WP_032670917.1\|1005564_1005981_+	phage family protein	R9TRJ4	Aeromonas_phage	6.9e-46	80.9
WP_023305513.1\|1006198_1007110_+	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	9.2e-43	37.6
WP_023305514.1\|1007167_1007731_+	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	9.6e-51	51.3
WP_023305515.1\|1007732_1009724_+	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	1.6e-188	49.4
WP_023305516.1\|1009725_1010175_+	GNAT family N-acetyltransferase	A0A2H4J9Z5	uncultured_Caudovirales_phage	2.0e-22	43.0
WP_023305517.1\|1010177_1010645_+	hypothetical protein	A0A2H4J679	uncultured_Caudovirales_phage	2.1e-06	44.7
WP_023305518.1\|1010647_1013356_+	hypothetical protein	G9L6D3	Escherichia_phage	0.0e+00	64.0
WP_023305519.1\|1013355_1016247_+	hypothetical protein	G9L6D4	Escherichia_phage	0.0e+00	75.8
WP_023305520.1\|1016311_1016653_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	7.4e-22	52.7
WP_023305521.1\|1016649_1018260_+	hypothetical protein	A0A2H4JCA3	uncultured_Caudovirales_phage	1.4e-224	70.3
WP_023305522.1\|1018280_1020275_+	hypothetical protein	G3M191	Escherichia_virus	1.5e-106	43.6
WP_023305523.1\|1020309_1021779_-	hypothetical protein	NA	NA	NA	NA
WP_023305524.1\|1021775_1022693_-	glycosyltransferase	U5P087	Shigella_phage	6.6e-158	89.5
WP_023305525.1\|1022689_1023052_-	GtrA family protein	U5P0S6	Shigella_phage	5.1e-29	56.7
WP_023305526.1\|1023237_1023468_+	hypothetical protein	A5LH82	Enterobacteria_phage	3.5e-23	71.4
WP_023305527.1\|1023448_1023988_+	lysozyme	H6WRZ4	Salmonella_phage	3.3e-93	90.4
WP_023305528.1\|1023984_1024347_+	hypothetical protein	R9TPM9	Aeromonas_phage	3.9e-13	45.3
WP_032624792.1\|1025452_1025731_+	hypothetical protein	NA	NA	NA	NA
WP_023303152.1\|1026203_1026575_+	hypothetical protein	NA	NA	NA	NA
WP_045259856.1\|1026653_1027271_-\|integrase	phage integrase	A0A1V0E036	Clostridioides_phage	3.9e-05	23.5
1031968:1031982	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2126032 : 2137396

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023306119.1\|2126032_2127496_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.9e-45	30.3
WP_003857405.1\|2127540_2127744_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	4.4e-14	56.7
WP_023300013.1\|2128031_2128463_+	hypothetical protein	A0A1W6JNV4	Morganella_phage	1.5e-16	35.2
WP_003857403.1\|2128497_2129184_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_023306120.1\|2129274_2130021_-	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_023306121.1\|2130164_2132198_+	peptidyl-dipeptidase Dcp	A0A1V0SIU1	Klosneuvirus	3.8e-20	22.4
WP_071788017.1\|2132811_2133039_-	hypothetical protein	NA	NA	NA	NA
WP_022647994.1\|2133601_2133820_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	8.3e-19	62.7
WP_023306122.1\|2134187_2134877_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.7e-81	60.5
WP_006808847.1\|2135140_2135380_-	DinI family protein	K7PKM2	Enterobacterial_phage	1.5e-32	91.1
WP_022647996.1\|2135706_2136126_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	7.2e-35	56.7
WP_032671166.1\|2136127_2137396_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.6e-226	90.8

DBSCAN-SWA_3

2432877 : 2479105

Cronobacter_phage(33.33%)

terminase,head,lysis,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023306288.1\|2432877_2433549_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.2e-79	59.9
WP_023306289.1\|2433541_2434810_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	5.8e-229	91.5
WP_023306290.1\|2434809_2435127_-	hypothetical protein	K7PGV5	Enterobacterial_phage	7.1e-11	44.0
WP_032671217.1\|2435491_2436616_+	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	4.9e-22	26.5
WP_108168622.1\|2436645_2438895_-	hypothetical protein	W6PEG9	Cronobacter_phage	4.8e-109	36.5
WP_108168623.1\|2438951_2441432_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	0.0e+00	91.0
WP_032671219.1\|2441418_2441784_-	peptidoglycan endopeptidase	F1C5F2	Cronobacter_phage	5.4e-63	90.8
WP_023306296.1\|2441797_2442268_-	hypothetical protein	F1C5F1	Cronobacter_phage	1.0e-77	92.3
WP_023306297.1\|2442267_2442765_-	hypothetical protein	F1C5F0	Cronobacter_phage	2.8e-86	89.7
WP_023306298.1\|2442764_2446283_-	hypothetical protein	R9TMK1	Aeromonas_phage	9.5e-104	37.2
WP_023306299.1\|2446319_2447063_-	hypothetical protein	G0ZNE7	Cronobacter_phage	2.0e-64	53.1
WP_023306300.1\|2447113_2447869_-	surface protein	G0ZNE6	Cronobacter_phage	2.9e-58	53.0
WP_023306301.1\|2447927_2448311_-	hypothetical protein	F1C5E4	Cronobacter_phage	1.7e-38	57.5
WP_014883994.1\|2448307_2448676_-	hypothetical protein	F1C5E3	Cronobacter_phage	3.0e-45	74.6
WP_023306302.1\|2448678_2449035_-	hypothetical protein	G0ZNE2	Cronobacter_phage	3.6e-27	55.6
WP_032671222.1\|2449034_2449208_-	hypothetical protein	I6R0P9	Salmonella_phage	1.7e-11	51.9
WP_023306304.1\|2449261_2449810_-	HNH endonuclease	K9L517	Pectobacterium_phage	9.4e-35	42.2
WP_023306305.1\|2449911_2450295_-	hypothetical protein	F1C5E2	Cronobacter_phage	7.5e-47	75.6
WP_023306306.1\|2450371_2450737_-	hypothetical protein	NA	NA	NA	NA
WP_061353765.1\|2450746_2451844_-	hypothetical protein	F1C5E1	Cronobacter_phage	4.5e-161	77.7
WP_017693196.1\|2451854_2452289_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.4e-49	72.2
WP_108168624.1\|2452292_2453678_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.8e-151	59.3
WP_047659003.1\|2453747_2454263_-	hypothetical protein	NA	NA	NA	NA
WP_108168625.1\|2454302_2455292_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	3.6e-109	66.1
WP_108168626.1\|2455239_2456691_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	2.5e-196	74.2
WP_108168627.1\|2456702_2458178_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	2.7e-230	77.2
WP_032634757.1\|2458187_2458637_-	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	1.5e-54	82.9
WP_108168628.1\|2458669_2459308_-	hypothetical protein	I6S676	Salmonella_phage	5.9e-113	91.0
WP_045333336.1\|2459311_2459530_-	hypothetical protein	NA	NA	NA	NA
WP_108168629.1\|2459709_2460255_-	hypothetical protein	A0A1V0E5P7	Salmonella_phage	2.5e-56	64.9
WP_108168630.1\|2460606_2461068_-\|lysis	lysis protein	M9NYX9	Enterobacteria_phage	3.1e-55	75.2
WP_108168631.1\|2461064_2461367_-	hypothetical protein	A0A289ZTW9	Serratia_phage	5.0e-14	49.5
WP_108168632.1\|2461363_2461858_-	lysozyme	M9P0E5	Enterobacteria_phage	3.2e-90	98.2
WP_023622516.1\|2461835_2462060_-\|lysis	lysis S family protein	M9NZI9	Enterobacteria_phage	2.1e-33	95.9
WP_108168633.1\|2462365_2463055_-	antiterminator	I6PDF8	Cronobacter_phage	5.5e-56	51.1
WP_108168634.1\|2463051_2463168_-	hypothetical protein	NA	NA	NA	NA
WP_001752686.1\|2463164_2463524_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	2.6e-65	98.3
WP_001752687.1\|2463520_2463811_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	1.8e-45	91.6
WP_108168635.1\|2463803_2463974_-	hypothetical protein	K7P7K0	Enterobacteria_phage	9.0e-21	94.3
WP_006809771.1\|2463973_2464429_-	hypothetical protein	I6PD71	Cronobacter_phage	1.1e-60	67.5
WP_085841678.1\|2465126_2465900_+	hypothetical protein	NA	NA	NA	NA
WP_023300409.1\|2465976_2466276_-	hypothetical protein	M1FPD5	Enterobacteria_phage	7.4e-18	53.7
WP_108168781.1\|2466272_2467052_-	replication protein	A0A193GYX1	Enterobacter_phage	1.4e-95	64.2
WP_108168636.1\|2467048_2467777_-	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	2.5e-35	66.7
WP_108168637.1\|2467910_2468456_-	hypothetical protein	K7P7P2	Enterobacteria_phage	2.6e-93	96.1
WP_108168638.1\|2468486_2468714_-	transcriptional regulator	Q76H55	Enterobacteria_phage	3.4e-23	70.4
WP_108168782.1\|2468825_2469530_+	hypothetical protein	Q76H56	Enterobacteria_phage	1.0e-102	78.6
WP_108168639.1\|2469616_2470051_+	hypothetical protein	NA	NA	NA	NA
WP_108168640.1\|2470467_2470935_+	hypothetical protein	NA	NA	NA	NA
WP_108168641.1\|2470939_2471545_+	hypothetical protein	A0A2C9D0J8	Yersinia_phage	3.2e-28	36.1
WP_058657563.1\|2471866_2472076_+	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	5.7e-33	94.2
WP_108168642.1\|2472146_2473115_+	hypothetical protein	A0A077KCC0	Edwardsiella_phage	1.5e-38	75.4
WP_108168643.1\|2473122_2473407_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-47	93.6
WP_108168644.1\|2473416_2474334_+	recombinase RecT	M9NZA6	Enterobacteria_phage	7.5e-170	99.3
WP_108168645.1\|2474330_2475011_+	exonuclease	M9NZE1	Enterobacteria_phage	2.0e-127	95.1
WP_047058769.1\|2475007_2475436_+	hypothetical protein	M9NYX4	Enterobacteria_phage	1.5e-72	95.8
WP_108168646.1\|2475596_2476262_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.5e-114	93.3
WP_108168783.1\|2476267_2476486_+	hypothetical protein	NA	NA	NA	NA
WP_108168647.1\|2476577_2476793_+	hypothetical protein	A0A0N7C211	Escherichia_phage	2.5e-15	59.4
WP_063860680.1\|2476794_2477433_+	HNH endonuclease	A0A173GC65	Salmonella_phage	3.7e-30	43.2
WP_023306353.1\|2477538_2477787_+	hypothetical protein	S4TND0	Salmonella_phage	2.6e-16	53.1
WP_023306354.1\|2477818_2479105_+	DUF3596 domain-containing protein	Q6HA01	Enterobacteria_phage	5.5e-134	55.3

DBSCAN-SWA_4

2752778 : 2842827

104

Enterobacteria_phage(24.14%)

protease,tail,portal,tRNA,terminase,head,holin,integrase,transposase,capsid

attL 2780998:2781013|attR 2842753:2842768

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003859899.1\|2752778_2753660_-\|protease	protease HtpX	NA	NA	NA	NA
WP_108168660.1\|2753853_2755902_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	7.8e-82	32.6
WP_003859895.1\|2755921_2756608_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_023306473.1\|2756704_2757202_-	GAF domain-containing protein	NA	NA	NA	NA
WP_022648459.1\|2757334_2758618_+	paraquat-inducible protein A	NA	NA	NA	NA
WP_022648460.1\|2758586_2761220_+	MCE family protein	NA	NA	NA	NA
WP_074132810.1\|2761297_2762740_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_006811010.1\|2762844_2763084_+	DUF1480 domain-containing protein	NA	NA	NA	NA
WP_023306475.1\|2763118_2763763_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	1.5e-55	49.8
WP_108168661.1\|2763930_2764911_+	DUF535 domain-containing protein	NA	NA	NA	NA
WP_022648464.1\|2765279_2765618_-	DUF2511 domain-containing protein	NA	NA	NA	NA
WP_023300432.1\|2765634_2766504_-	copper resistance D domain-containing protein	NA	NA	NA	NA
WP_023300433.1\|2766505_2766877_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_003859784.1\|2767014_2767245_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	7.0e-16	61.8
WP_022648467.1\|2767356_2767995_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_022648468.1\|2768019_2768682_+	exodeoxyribonuclease X	NA	NA	NA	NA
WP_022648469.1\|2768663_2770739_-	oligopeptidase B	NA	NA	NA	NA
WP_022648470.1\|2770814_2771465_-	DUF533 domain-containing protein	NA	NA	NA	NA
WP_023306478.1\|2771637_2772816_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_080346798.1\|2772877_2774296_-	hypothetical protein	NA	NA	NA	NA
WP_003859774.1\|2775720_2776362_-	ketohydroxyglutarate aldolase	NA	NA	NA	NA
WP_023306481.1\|2776401_2778213_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_022648481.1\|2778447_2779923_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	4.6e-76	36.2
WP_003859769.1\|2780277_2781147_+	transcriptional regulator HexR	NA	NA	NA	NA
2780998:2781013	attL	NA	NA	NA	NA
WP_003859767.1\|2781261_2782704_+	pyruvate kinase	NA	NA	NA	NA
WP_032676184.1\|2782747_2783719_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_022648483.1\|2783838_2785158_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
WP_022648484.1\|2785173_2786133_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_023306484.1\|2786195_2786951_+	zinc ABC transporter ATP-binding protein ZnuC	W6JKT0	Anomala_cuprea_entomopoxvirus	6.7e-15	30.2
WP_022648485.1\|2786947_2787733_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_006811035.1\|2787785_2788796_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	3.6e-08	24.5
WP_022648487.1\|2788804_2789419_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_063160107.1\|2789499_2790021_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	5.8e-10	34.2
WP_003859747.1\|2790055_2790796_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_023300445.1\|2790823_2791267_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_023300446.1\|2791268_2793041_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_071785211.1\|2793039_2793231_+	hypothetical protein	NA	NA	NA	NA
WP_022648490.1\|2793304_2793871_+	hydrolase	NA	NA	NA	NA
WP_063136104.1\|2794235_2794502_+	DinI family protein	K7PKR6	Enterobacteria_phage	4.7e-40	94.3
WP_108168662.1\|2794595_2795879_-\|tail	phage tail protein	K7PHF0	Enterobacteria_phage	1.4e-145	63.3
WP_108168663.1\|2795937_2796171_-	cor protein	E4WL42	Enterobacteria_phage	6.6e-30	77.6
WP_045892418.1\|2796278_2796950_-	hypothetical protein	A0A2P0WA07	Enterobacter_phage	1.2e-87	73.5
WP_017382568.1\|2796950_2797265_-	hypothetical protein	A0A2P0WA17	Enterobacter_phage	1.5e-32	64.7
WP_108168664.1\|2797307_2800865_-	host specificity protein	Q9MCU0	Escherichia_phage	0.0e+00	72.0
WP_047731792.1\|2800918_2801503_-\|tail	tail assembly protein	A0A1P8DTG7	Proteus_phage	1.1e-54	53.1
WP_108168665.1\|2801502_2802213_-	peptidase P60	F1C573	Cronobacter_phage	4.3e-96	69.4
WP_006809150.1\|2802215_2802974_-\|tail	phage minor tail protein L	A0A1W6JNX9	Morganella_phage	1.0e-95	64.0
WP_063959197.1\|2802970_2803309_-\|tail	phage tail protein	K7PKL8	Enterobacterial_phage	7.3e-38	59.8
WP_108168666.1\|2803311_2806776_-\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	0.0e+00	93.5
WP_022646498.1\|2807106_2808030_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	3.8e-177	99.7
WP_108168667.1\|2808055_2808286_-	cor protein	Q5G8V7	Enterobacteria_phage	8.5e-22	69.6
WP_045332808.1\|2808406_2808685_-	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	2.8e-43	96.7
WP_016240212.1\|2808693_2809077_-	hypothetical protein	K7PKV6	Enterobacterial_phage	6.7e-64	94.4
WP_033146297.1\|2809085_2809529_-	hypothetical protein	K7PHL2	Enterobacterial_phage	1.6e-72	94.5
WP_022648886.1\|2809588_2809936_-	DUF3168 domain-containing protein	Q9MCS8	Enterobacteria_phage	3.8e-58	99.1
WP_108168668.1\|2809932_2810382_-	hypothetical protein	K7P6X4	Enterobacteria_phage	1.9e-73	98.0
WP_045626370.1\|2810378_2810717_-\|head,tail	head-tail adaptor protein	K7P7L2	Enterobacteria_phage	5.4e-57	96.4
WP_080396471.1\|2810716_2811043_-	hypothetical protein	K7PGU9	Enterobacterial_phage	3.4e-56	99.1
WP_016066093.1\|2811076_2812234_-\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	4.5e-212	100.0
WP_047345265.1\|2812236_2812914_-\|head,protease	HK97 family phage prohead protease	F1C583	Cronobacter_phage	3.2e-125	100.0
WP_108168669.1\|2812931_2814206_-\|portal	phage portal protein	F1C584	Cronobacter_phage	1.6e-247	99.3
WP_108168670.1\|2814205_2815720_-\|terminase	terminase	Q9MCT1	Enterobacteria_phage	8.0e-294	99.6
WP_006809164.1\|2815726_2816212_-\|terminase	terminase	Q77WA1	Escherichia_phage	1.3e-80	98.8
WP_032624429.1\|2816395_2816599_-	hypothetical protein	A0A220NRN5	Escherichia_phage	9.8e-22	76.1
WP_001031354.1\|2816598_2816940_-	HNH endonuclease	K7PM05	Enterobacterial_phage	4.6e-64	99.1
WP_047749350.1\|2816996_2817587_-	hypothetical protein	K7P7D2	Enterobacteria_phage	5.6e-110	94.4
WP_047749351.1\|2817568_2819029_-	glycosyltransferase family 2 protein	A0A220NRM5	Escherichia_phage	5.5e-231	77.2
WP_108168671.1\|2819028_2819589_-	hypothetical protein	A0A220NRM6	Escherichia_phage	1.4e-97	88.7
WP_100160544.1\|2819708_2820044_-	hypothetical protein	S4TTH3	Salmonella_phage	3.7e-42	73.9
WP_108168672.1\|2820120_2820666_+	hypothetical protein	S4TR57	Salmonella_phage	3.1e-94	96.7
WP_108168673.1\|2821126_2821462_-	hypothetical protein	Q5QF73	Pseudomonas_virus	6.6e-15	55.4
WP_108168674.1\|2821579_2821780_-	hypothetical protein	K7PM01	Enterobacterial_phage	7.9e-16	80.4
WP_108168675.1\|2821730_2822003_-	hypothetical protein	NA	NA	NA	NA
WP_108168676.1\|2822010_2822640_-	endolysin	G8C7W0	Escherichia_phage	6.2e-99	86.6
WP_045338762.1\|2822639_2822918_-\|holin	phage holin family protein	G8C7V9	Escherichia_phage	1.3e-37	85.9
WP_023150206.1\|2822907_2823297_-	hypothetical protein	G8C7V8	Escherichia_phage	8.9e-64	99.2
WP_105322835.1\|2823802_2824030_+	hypothetical protein	NA	NA	NA	NA
WP_015570940.1\|2824076_2824562_-	HNH endonuclease	C4ML56	Xanthomonas_virus	1.5e-23	42.7
WP_108168677.1\|2824857_2825640_-	antitermination protein	F1C595	Cronobacter_phage	1.1e-108	76.0
WP_032621744.1\|2825643_2827515_-	DNA replication protein	Q5G8S8	Enterobacteria_phage	1.1e-223	59.6
WP_108168678.1\|2827622_2828555_-	hypothetical protein	C5IHL2	Burkholderia_virus	1.7e-36	37.8
WP_108168679.1\|2828551_2828749_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_032645228.1\|2828750_2828969_-	hypothetical protein	NA	NA	NA	NA
WP_017384394.1\|2829083_2829791_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.6e-93	73.4
WP_017384395.1\|2830204_2830405_+	hypothetical protein	NA	NA	NA	NA
WP_016240231.1\|2831019_2831223_+	hypothetical protein	NA	NA	NA	NA
WP_108168680.1\|2831203_2831614_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	9.5e-48	83.5
WP_006811082.1\|2831800_2832307_+	hypothetical protein	F1C5A2	Cronobacter_phage	4.1e-53	54.8
WP_108168681.1\|2832319_2833180_+	hypothetical protein	F1C5A3	Cronobacter_phage	1.6e-126	75.9
WP_006811084.1\|2833179_2833431_+	hypothetical protein	NA	NA	NA	NA
WP_044901830.1\|2833432_2833855_+	hypothetical protein	NA	NA	NA	NA
WP_023337027.1\|2833851_2833977_+	hypothetical protein	NA	NA	NA	NA
WP_023337026.1\|2833973_2834330_+	hypothetical protein	NA	NA	NA	NA
WP_023337025.1\|2834322_2834655_+	hypothetical protein	NA	NA	NA	NA
WP_058660500.1\|2834717_2834954_+	excisionase	Q8W657	Enterobacteria_phage	1.1e-37	88.5
WP_108168682.1\|2835009_2836323_+\|integrase	integrase	Q8W658	Enterobacteria_phage	1.0e-220	85.8
WP_108168683.1\|2836301_2837075_+	hypothetical protein	Q859D1	Escherichia_coli_phage	2.5e-57	79.5
WP_003859737.1\|2837126_2837522_+	membrane protein	NA	NA	NA	NA
WP_003859735.1\|2837562_2838306_+	carboxy-S-adenosyl-L-methionine synthase CmoA	A0A1S6L2V9	Erwinia_phage	6.1e-29	30.2
WP_015570275.1\|2838302_2839274_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_100248961.1\|2839170_2839446_-	hypothetical protein	NA	NA	NA	NA
WP_023300450.1\|2839472_2840216_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_023306486.1\|2840294_2840855_-	VOC family protein	NA	NA	NA	NA
WP_023306487.1\|2841093_2842827_+\|tRNA	arginine--tRNA ligase	A0A1V0SIS8	Klosneuvirus	1.4e-87	37.2
2842753:2842768	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3519390 : 3602588

Escherichia_phage(21.95%)

portal,tRNA,terminase,holin,transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003863138.1\|3519390_3520158_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_003863136.1\|3520189_3520729_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_022649067.1\|3520744_3520993_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_003863132.1\|3521109_3522471_-	signal recognition particle protein	NA	NA	NA	NA
WP_014832951.1\|3522637_3523429_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_032671396.1\|3523448_3524735_+	DUF21 domain-containing protein	NA	NA	NA	NA
WP_015571577.1\|3524787_3525405_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_022649070.1\|3525503_3526382_+	NAD(+) kinase	NA	NA	NA	NA
WP_023306740.1\|3526467_3528129_+	DNA repair protein RecN	NA	NA	NA	NA
WP_071524123.1\|3528103_3528286_+	hypothetical protein	NA	NA	NA	NA
WP_003863121.1\|3528267_3528606_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_003863119.1\|3528667_3528955_-	RnfH family protein	NA	NA	NA	NA
WP_006811645.1\|3528944_3529421_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_003863115.1\|3529538_3530021_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	6.8e-29	46.8
WP_001549565.1\|3530677_3531919_+	DUF4102 domain-containing protein	A0A1B5FPC6	Escherichia_phage	6.7e-105	48.3
WP_001549566.1\|3531977_3532856_-	hypothetical protein	NA	NA	NA	NA
WP_001549567.1\|3532981_3533194_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_077633883.1\|3533358_3534714_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_057064095.1\|3534955_3535576_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_047363791.1\|3536939_3537167_+	hypothetical protein	NA	NA	NA	NA
WP_108168785.1\|3537388_3537670_+	DNA-binding protein	NA	NA	NA	NA
WP_000350435.1\|3537704_3538274_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_047363789.1\|3538379_3541229_+	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	1.5e-128	41.2
WP_001446316.1\|3541228_3541420_+	hypothetical protein	NA	NA	NA	NA
WP_108168710.1\|3541480_3543058_+	cell division protein FtsH	C7U047	Ostreococcus_tauri_virus	4.5e-98	43.8
WP_001275372.1\|3543145_3543604_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_108168711.1\|3543626_3544541_+	hypothetical protein	NA	NA	NA	NA
WP_108168712.1\|3544643_3545531_+	hypothetical protein	NA	NA	NA	NA
WP_047363779.1\|3545620_3546232_+	membrane protein	NA	NA	NA	NA
WP_108168713.1\|3546311_3547457_+	hypothetical protein	NA	NA	NA	NA
WP_108168714.1\|3547446_3547887_+	thiol reductase thioredoxin	V5L6J2	Insectomime_virus	2.6e-11	32.4
WP_108168715.1\|3547890_3549606_+	sodium:proton exchanger	NA	NA	NA	NA
WP_016154556.1\|3549602_3550100_+	hypothetical protein	NA	NA	NA	NA
WP_003847784.1\|3551071_3552223_+	PDZ domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	9.9e-26	30.3
WP_057064083.1\|3552447_3553428_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	6.1e-93	57.3
WP_069219379.1\|3554384_3555536_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	6.4e-41	35.0
WP_108168716.1\|3555492_3555849_-	hypothetical protein	U5P4I9	Shigella_phage	5.7e-33	91.2
WP_057064435.1\|3556987_3557809_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	2.3e-45	38.7
WP_106672551.1\|3558025_3558727_+	WYL domain-containing protein	NA	NA	NA	NA
WP_015063050.1\|3558767_3559004_+	hypothetical protein	NA	NA	NA	NA
WP_057064437.1\|3559003_3559447_+	hypothetical protein	NA	NA	NA	NA
WP_015063048.1\|3559471_3559939_+	hypothetical protein	NA	NA	NA	NA
WP_108168717.1\|3560240_3561209_-	phage exclusion protein	NA	NA	NA	NA
WP_108168718.1\|3561737_3564047_+	ATPase	NA	NA	NA	NA
WP_015063045.1\|3564050_3565367_+	hypothetical protein	NA	NA	NA	NA
WP_000093087.1\|3565363_3567559_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_108168719.1\|3568412_3568892_+	hypothetical protein	A9J566	Pseudomonas_phage	2.3e-13	29.8
WP_057064440.1\|3568907_3569384_+	DNA repair protein RadC	NA	NA	NA	NA
WP_001548165.1\|3569392_3569614_+	DUF987 domain-containing protein	NA	NA	NA	NA
WP_007870247.1\|3569631_3569949_+	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_057064441.1\|3569969_3570299_+	toxin	NA	NA	NA	NA
WP_023306741.1\|3570983_3571910_-\|transposase	transposase	A0A077SL42	Escherichia_phage	2.9e-68	44.4
WP_023306742.1\|3572059_3573784_-	flagellin	NA	NA	NA	NA
WP_108168720.1\|3577578_3578547_-	hypothetical protein	G1CSU0	Cronobacter_virus	6.5e-55	40.8
WP_023306746.1\|3578550_3580158_-	DUF1983 domain-containing protein	S4TTF5	Salmonella_phage	3.7e-212	68.9
WP_023306747.1\|3580204_3581431_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	2.3e-129	87.2
WP_108168721.1\|3581444_3582749_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	1.8e-233	93.5
WP_105322832.1\|3582748_3584485_-\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	0.0e+00	99.7
WP_022650844.1\|3584484_3584958_-\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	2.3e-85	98.7
WP_047353046.1\|3585115_3585466_-	HNH endonuclease	K7PHK9	Enterobacteria_phage	2.4e-52	82.8
WP_032671403.1\|3585465_3586056_-	hypothetical protein	S4TR53	Salmonella_phage	1.0e-95	84.1
WP_023305918.1\|3586221_3586479_+	hypothetical protein	K7P7V5	Enterobacteria_phage	2.7e-32	95.1
WP_023306752.1\|3586779_3588237_-	hypothetical protein	K7PKP3	Enterobacterial_phage	1.2e-273	92.8
WP_032671404.1\|3588427_3588718_+	lipoprotein bor	C6ZCX3	Enterobacteria_phage	6.3e-30	62.9
WP_032671652.1\|3588828_3589113_-	hypothetical protein	G8C7W3	Escherichia_phage	1.1e-26	67.0
WP_096216658.1\|3589179_3589362_-	hypothetical protein	K7PM01	Enterobacterial_phage	2.1e-15	83.7
WP_023306756.1\|3590029_3590299_-	hypothetical protein	G8C7W1	Escherichia_phage	4.8e-32	90.8
WP_023306757.1\|3590306_3590936_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	1.4e-114	97.6
WP_023306758.1\|3590935_3591214_-\|holin	phage holin family protein	G8C7V9	Escherichia_phage	9.6e-36	87.4
WP_023306759.1\|3591203_3591593_-	phage membrane protein	G8C7V8	Escherichia_phage	2.3e-59	94.5
WP_105322835.1\|3591673_3591901_+	hypothetical protein	NA	NA	NA	NA
WP_015570940.1\|3591947_3592433_-	HNH endonuclease	C4ML56	Xanthomonas_virus	1.5e-23	42.7
WP_023306760.1\|3592727_3593510_-	antitermination protein	F1C595	Cronobacter_phage	9.4e-113	79.1
WP_108168722.1\|3593506_3593815_-	hypothetical protein	NA	NA	NA	NA
WP_000186531.1\|3593816_3595688_-	bifunctional DNA primase/helicase	K7PK08	Enterobacteria_phage	4.5e-230	61.3
WP_023306764.1\|3595791_3596814_-	hypothetical protein	V5URT9	Shigella_phage	4.0e-47	55.6
WP_023306765.1\|3596806_3597016_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_024176468.1\|3597017_3597242_-	transcriptional regulator	G8C7U2	Escherichia_phage	1.3e-19	59.7
WP_023150198.1\|3597354_3598053_+	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	3.0e-78	62.5
WP_006811077.1\|3598254_3598686_+	transcriptional regulator	NA	NA	NA	NA
WP_108168723.1\|3598752_3599139_+	peptidase S24	F1C5A0	Cronobacter_phage	1.9e-37	59.7
WP_006811079.1\|3599245_3599470_+	hypothetical protein	NA	NA	NA	NA
WP_023296234.1\|3599462_3599870_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	2.1e-47	87.5
WP_108168724.1\|3599823_3600435_+	HNH endonuclease	A0A2I7S010	Vibrio_phage	6.6e-37	47.2
WP_023306768.1\|3600424_3600847_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	1.6e-45	66.4
WP_023306770.1\|3600950_3601262_+	hypothetical protein	NA	NA	NA	NA
WP_000050710.1\|3601251_3601461_+	hypothetical protein	I6PBM8	Cronobacter_phage	4.4e-33	97.1
WP_023306771.1\|3601415_3602588_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	8.3e-206	91.0

DBSCAN-SWA_6

4052564 : 4103691

Erwinia_phage(37.29%)

protease,lysis,tail,portal,tRNA,terminase,head,integrase,plate,capsid

attL 4058653:4058703|attR 4103871:4103921

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022649449.1\|4052564_4053578_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.3e-108	58.6
WP_001144069.1\|4053814_4054030_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_003862574.1\|4054145_4055891_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.4e-76	39.0
WP_071530993.1\|4055908_4056028_+	RNA polymerase subunit sigma	NA	NA	NA	NA
WP_006812010.1\|4056044_4057889_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_023306981.1\|4057991_4058498_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
4058653:4058703	attL	NA	NA	NA	NA
WP_023135249.1\|4058855_4059074_-	phage late control gene	A0A2I8TV89	Erwinia_phage	4.3e-39	100.0
WP_096185612.1\|4059140_4060310_-	phage late control D family protein	A0A218M4J7	Erwinia_phage	5.6e-210	100.0
WP_001630830.1\|4060306_4060792_-\|tail	Phage-related tail protein	S4TUC3	Salmonella_phage	2.6e-84	98.1
WP_096185610.1\|4060804_4063246_-\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	0.0e+00	95.2
WP_032159022.1\|4063238_4063376_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.2e-18	97.8
WP_096185608.1\|4063390_4063726_-\|tail	phage tail assembly protein	A0A218M4J8	Erwinia_phage	1.8e-52	99.1
WP_001550210.1\|4063788_4064310_-\|tail	phage major tail tube protein	Q37845	Escherichia_phage	1.7e-94	100.0
WP_096185606.1\|4064325_4065504_-\|tail	phage tail protein	Q37844	Escherichia_phage	5.4e-213	95.4
WP_096185603.1\|4065632_4066088_-\|tail	tail fiber assembly protein	A0A1B0V844	Salmonella_phage	6.0e-27	47.8
WP_096185600.1\|4066054_4068076_-	hypothetical protein	A0A1B0V7G4	Salmonella_phage	3.2e-104	53.9
WP_079825733.1\|4068082_4068616_-\|tail	phage tail protein I	Q37841	Escherichia_phage	2.1e-95	92.6
WP_096185597.1\|4068608_4069517_-\|plate	baseplate assembly protein	Q37840	Escherichia_phage	2.8e-153	94.4
WP_089620308.1\|4069523_4069871_-\|plate	baseplate assembly protein	A0A218M4K8	Erwinia_phage	9.4e-57	98.3
WP_044068232.1\|4069867_4070503_-\|plate	phage baseplate assembly protein V	A0A2I8TV69	Erwinia_phage	4.3e-108	96.2
WP_096185595.1\|4070571_4071021_-	phage virion morphogenesis protein	O80313	Escherichia_phage	8.7e-71	96.6
WP_016243398.1\|4071013_4071481_-	hypothetical protein	A0A218M4K6	Erwinia_phage	4.2e-84	99.4
WP_001384078.1\|4071443_4071617_-	hypothetical protein	O80311	Escherichia_phage	6.2e-25	98.2
WP_096185593.1\|4071588_4071999_-\|lysis	LysB family phage lysis regulatory protein	A0A218M4K2	Erwinia_phage	1.7e-49	75.7
WP_096185591.1\|4071998_4072430_-	lysA protein	A0A218M4L6	Erwinia_phage	4.4e-64	83.2
WP_063408324.1\|4072426_4072939_-	lysozyme	A0A218M4K3	Erwinia_phage	3.0e-91	97.6
WP_001437784.1\|4072922_4073144_-	primosomal protein	A0A218M4L5	Erwinia_phage	8.4e-35	98.6
WP_042325371.1\|4073134_4073338_-\|tail	tail protein X	A0A218M4L8	Erwinia_phage	2.6e-30	97.0
WP_044068245.1\|4073337_4073847_-\|head	head completion/stabilization protein	A0A218M4L7	Erwinia_phage	1.1e-90	98.8
WP_096185588.1\|4073940_4074690_-\|terminase	terminase	Q6K1I5	Salmonella_virus	6.9e-113	87.6
WP_096185585.1\|4074693_4075761_-\|capsid	phage major capsid protein, P2 family	O80304	Escherichia_phage	2.9e-197	99.4
WP_096185582.1\|4075836_4076691_-\|capsid	GPO family capsid scaffolding protein	A0A218M4L9	Erwinia_phage	4.1e-154	96.8
WP_096185580.1\|4076856_4078626_+	oxidoreductase	A0A218M4M1	Erwinia_phage	0.0e+00	99.7
WP_096185578.1\|4078625_4079672_+\|portal	phage portal protein	A0A2I8TV74	Erwinia_phage	1.2e-190	95.1
WP_096185576.1\|4079692_4079893_+	hypothetical protein	NA	NA	NA	NA
WP_096185573.1\|4079806_4079989_-	hypothetical protein	NA	NA	NA	NA
WP_096185570.1\|4079974_4080160_+	hypothetical protein	A0A0M4R4Y4	Salmonella_phage	7.3e-08	75.0
WP_047721256.1\|4080156_4080888_-	hypothetical protein	Q37850	Escherichia_phage	3.6e-130	95.1
WP_053004566.1\|4080969_4081410_-	DinI family protein	A0A218M4I0	Erwinia_phage	5.5e-70	99.3
WP_096185562.1\|4081528_4083745_-	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	94.6
WP_096185560.1\|4083746_4083968_-	hypothetical protein	A0A218M4I6	Erwinia_phage	2.2e-27	79.5
WP_047721253.1\|4083967_4084195_-	DUF2732 domain-containing protein	A0A218M4I9	Erwinia_phage	3.4e-23	78.7
WP_001550179.1\|4084264_4084465_-	hypothetical protein	A0A0M5M7U3	Salmonella_phage	3.7e-29	92.4
WP_047721252.1\|4084451_4084679_-	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	3.9e-35	93.3
WP_096185558.1\|4084686_4085196_-	hypothetical protein	Q6K1F8	Salmonella_virus	9.9e-79	86.4
WP_024138324.1\|4085226_4085490_-	hypothetical protein	A0A218M4I5	Erwinia_phage	7.4e-30	72.4
WP_096185556.1\|4085582_4086212_+	phage repressor protein CI	A0A218M4J1	Erwinia_phage	7.9e-62	56.6
WP_047721250.1\|4086211_4087255_+\|integrase	integrase	A0A218M4I3	Erwinia_phage	6.3e-197	96.8
WP_108168786.1\|4088174_4088513_-	hypothetical protein	NA	NA	NA	NA
WP_108168744.1\|4088521_4089136_-\|tail	phage tail protein	K7PM97	Enterobacterial_phage	1.0e-66	68.2
WP_108168745.1\|4089149_4090811_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	97.5
WP_108168746.1\|4090794_4091151_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	1.2e-59	98.3
WP_108168747.1\|4091108_4091300_-\|terminase	terminase	NA	NA	NA	NA
WP_108168748.1\|4091426_4091870_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	1.4e-76	89.1
WP_108168749.1\|4091869_4092163_-	hypothetical protein	A0A2H4JD08	uncultured_Caudovirales_phage	1.2e-41	81.4
WP_023304516.1\|4092155_4092494_-	hypothetical protein	A0A2H4JHK5	uncultured_Caudovirales_phage	5.1e-23	48.6
WP_108168787.1\|4092490_4093717_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	9.9e-234	97.3
WP_108168750.1\|4093727_4094288_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.0e-100	98.4
WP_108168751.1\|4094339_4095506_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	2.6e-215	99.0
WP_108168752.1\|4095749_4096523_+	hypothetical protein	NA	NA	NA	NA
WP_108168788.1\|4096565_4096802_-	hypothetical protein	NA	NA	NA	NA
WP_108168753.1\|4097169_4098534_-	hypothetical protein	A0A2H4JFA4	uncultured_Caudovirales_phage	2.7e-256	96.0
WP_014072026.1\|4098530_4098899_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	1.8e-61	98.4
WP_048288911.1\|4098895_4099123_-	hypothetical protein	A0A2H4JBA1	uncultured_Caudovirales_phage	1.0e-27	87.8
WP_039274485.1\|4099115_4099301_-	hypothetical protein	A0A2H4JFH8	uncultured_Caudovirales_phage	4.7e-23	96.7
WP_023304529.1\|4099293_4099506_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	5.3e-10	50.9
WP_023304530.1\|4099699_4099894_+	hypothetical protein	NA	NA	NA	NA
WP_108168754.1\|4100407_4101187_-	hypothetical protein	Q8HA02	Enterobacteria_phage	4.3e-41	52.0
WP_071882736.1\|4101195_4101405_-	DNA-binding protein	NA	NA	NA	NA
WP_108168789.1\|4101547_4101907_-	hypothetical protein	NA	NA	NA	NA
WP_108168790.1\|4102269_4103691_-\|integrase	integrase	H7BV31	unidentified_phage	8.8e-08	27.2
4103871:4103921	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP028537

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

61632 : 158696

Salmonella_phage(25.81%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000255946.1\|61632_62655_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	4.6e-200	99.4
WP_001317493.1\|62651_63434_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
WP_001284313.1\|64271_65771_-	kinase	NA	NA	NA	NA
WP_000081622.1\|65796_67434_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_001253653.1\|67433_68474_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001253658.1\|68559_69198_-	VWA domain-containing protein	NA	NA	NA	NA
WP_000116681.1\|69197_69839_-	tellurium resistance protein TerX	NA	NA	NA	NA
WP_024179285.1\|69861_70500_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001176767.1\|70962_71430_-	tellurium resistance protein TerW	NA	NA	NA	NA
WP_000506887.1\|71447_72656_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_000797366.1\|72666_73623_-	citrate lyase subunit beta	NA	NA	NA	NA
WP_001182411.1\|73622_74702_-	hypothetical protein	A0A172Q0S8	Acinetobacter_phage	8.1e-38	33.8
WP_001040059.1\|74703_75477_-	hypothetical protein	NA	NA	NA	NA
WP_001285478.1\|75469_76612_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	1.7e-30	35.4
WP_001035162.1\|76621_77680_-	hypothetical protein	NA	NA	NA	NA
WP_000254136.1\|78003_78585_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	6.3e-13	30.0
WP_001054787.1\|78584_79742_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_000007448.1\|79764_80220_+	Tellurite resistance protein TerB	NA	NA	NA	NA
WP_000255079.1\|80242_81283_+	tellurium resistance protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
WP_000116677.1\|81331_81910_+	chemical-damaging agent resistance protein C	A0A2P1N0L4	Streptomyces_phage	3.3e-06	40.0
WP_000301242.1\|81977_82553_+	TerD family protein	K4JRX3	Caulobacter_phage	8.7e-31	41.6
WP_001053338.1\|82981_84223_+	tellurium resistance protein TerF	NA	NA	NA	NA
WP_000077926.1\|84785_85067_-	hypothetical protein	NA	NA	NA	NA
WP_000398480.1\|85116_85308_-	hypothetical protein	NA	NA	NA	NA
WP_001371937.1\|85399_85771_-	hypothetical protein	NA	NA	NA	NA
WP_000341066.1\|86113_86506_+	hypothetical protein	NA	NA	NA	NA
WP_012006596.1\|86484_86796_+	hypothetical protein	NA	NA	NA	NA
WP_024136327.1\|87109_87403_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_000088046.1\|87407_88733_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_000134171.1\|88793_89000_+	hypothetical protein	NA	NA	NA	NA
WP_000985911.1\|89101_89512_+	hypothetical protein	NA	NA	NA	NA
WP_001572439.1\|89524_90340_+	HNH endonuclease	G0X580	Salmonella_phage	1.1e-15	36.5
WP_001043843.1\|90593_91019_+	hypothetical protein	NA	NA	NA	NA
WP_001224687.1\|91567_91876_+	hypothetical protein	NA	NA	NA	NA
WP_000784387.1\|91891_92749_+	HNH endonuclease	G0X580	Salmonella_phage	3.9e-11	34.2
WP_001194555.1\|92810_93014_+	hypothetical protein	NA	NA	NA	NA
WP_000797838.1\|93100_93280_-	hypothetical protein	NA	NA	NA	NA
WP_004202492.1\|94469_94811_-	RamA family antibiotic efflux transcriptional regulator	D0R0F8	Streptococcus_phage	2.0e-06	29.8
WP_000608644.1\|95397_96660_-\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_001067855.1\|97297_98002_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000090707.1\|98965_99808_+\|transposase	transposase	NA	NA	NA	NA
WP_000351433.1\|99794_101918_+\|transposase	transposase	NA	NA	NA	NA
WP_058657096.1\|101917_103366_+	ATP-binding protein	NA	NA	NA	NA
WP_001324699.1\|103406_104963_+\|transposase	transposase	NA	NA	NA	NA
WP_108168468.1\|104974_105901_+	hypothetical protein	NA	NA	NA	NA
WP_001097216.1\|106253_106553_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_001239419.1\|107116_108943_+	hypothetical protein	E5E3R2	Burkholderia_phage	4.7e-14	22.8
WP_000647571.1\|109111_109462_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.8e-18	50.5
WP_032192123.1\|109609_110041_-	silver-binding protein SilE	NA	NA	NA	NA
WP_000555737.1\|110291_111767_-	Cu(+)/Ag(+) sensor histidine kinase	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_000697965.1\|111759_112440_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.2e-31	36.0
WP_071624363.1\|112441_112567_+	outer-membrane efflux lipo domain protein	NA	NA	NA	NA
WP_038988996.1\|112629_114015_+	Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA	NA	NA	NA
WP_001246155.1\|114042_114396_+	copper ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001398209.1\|114509_115802_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_011251357.1\|115812_118959_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	1.2e-60	22.4
WP_000758221.1\|119045_119486_+	hypothetical protein	NA	NA	NA	NA
WP_038988997.1\|119613_122061_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.8e-83	35.0
WP_000843501.1\|122101_122299_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_000287499.1\|122332_123070_-	peptidase M23	A0A2H4JAF5	uncultured_Caudovirales_phage	1.3e-10	31.9
WP_001023231.1\|123344_123794_-	hypothetical protein	NA	NA	NA	NA
WP_000925242.1\|124028_125846_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_001242438.1\|125845_126742_+	copper resistance protein B	NA	NA	NA	NA
WP_000025662.1\|126781_127162_+	copper resistance system chaperone PcoC	NA	NA	NA	NA
WP_000723069.1\|128161_128596_+	copper-binding protein	NA	NA	NA	NA
WP_000193209.1\|128974_129793_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_001572381.1\|129789_130995_+	hypothetical protein	NA	NA	NA	NA
WP_000121165.1\|131058_131262_-	hypothetical protein	NA	NA	NA	NA
WP_000078514.1\|131274_132594_-	DUF1173 domain-containing protein	NA	NA	NA	NA
WP_000833382.1\|132844_134272_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-100	52.3
WP_001572389.1\|134486_135002_+	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6
WP_000975182.1\|135004_135901_+	hypothetical protein	NA	NA	NA	NA
WP_015059496.1\|136122_136356_+	hypothetical protein	NA	NA	NA	NA
WP_001046767.1\|136401_136656_+	hypothetical protein	NA	NA	NA	NA
WP_024136338.1\|136693_136981_+	hypothetical protein	NA	NA	NA	NA
WP_001572393.1\|137017_137248_+	hypothetical protein	NA	NA	NA	NA
WP_000185304.1\|137584_138046_+	hypothetical protein	NA	NA	NA	NA
WP_000074418.1\|138075_138483_+	hypothetical protein	NA	NA	NA	NA
WP_029698059.1\|138533_138851_-	hypothetical protein	NA	NA	NA	NA
WP_031613424.1\|139227_139578_-	hypothetical protein	NA	NA	NA	NA
WP_108168469.1\|139687_140068_-	hypothetical protein	A0A1B0V7H9	Salmonella_phage	1.5e-44	100.0
WP_108168470.1\|139983_142881_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	9.3e-182	37.8
WP_000509966.1\|142975_143581_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_065313682.1\|146325_146775_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	9.0e-60	100.0
WP_001067855.1\|146833_147538_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000954592.1\|148527_148704_-	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_001043260.1\|149033_149849_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_000251875.1\|149935_150238_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_001445143.1\|150131_150383_-	hypothetical protein	NA	NA	NA	NA
WP_015344975.1\|150413_151907_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001255015.1\|152018_152324_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_058100717.1\|152351_153566_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	5.5e-19	28.7
WP_001447541.1\|153782_154667_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_015344975.1\|154697_156191_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000743213.1\|156401_156626_-	hypothetical protein	NA	NA	NA	NA
WP_001446887.1\|156622_157360_-	resolvase	NA	NA	NA	NA
WP_001550559.1\|157466_157958_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|157991_158696_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_2

164823 : 189293

Escherichia_phage(50.0%)

integrase,transposase

attL 173114:173173|attR 176706:177527

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067855.1\|164823_165528_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_012291484.1\|165473_165683_-	hypothetical protein	Q1MVP5	Enterobacteria_phage	8.9e-10	89.5
WP_063102497.1\|165721_166108_+	bleomycin binding protein	NA	NA	NA	NA
WP_108168472.1\|166427_166820_-	NimC/NimA family protein	NA	NA	NA	NA
WP_001067855.1\|167154_167859_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002914189.1\|168178_169354_+	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NA	NA	NA	NA
WP_000347934.1\|169377_172530_+	multidrug efflux RND transporter permease subunit OqxB	NA	NA	NA	NA
WP_000888203.1\|172599_173079_-	transcriptional regulator	NA	NA	NA	NA
173114:173173	attL	NA	NA	NA	NA
WP_001067855.1\|173167_173872_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_023145375.1\|174100_174415_-	hypothetical protein	NA	NA	NA	NA
WP_000845048.1\|174353_175367_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001389366.1\|175524_175998_+	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IAU3	Erwinia_phage	1.3e-16	34.6
WP_001067855.1\|176759_177464_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_071525219.1\|177454_177643_+	hypothetical protein	NA	NA	NA	NA
176706:177527	attR	NA	NA	NA	NA
WP_000105383.1\|177730_179167_+	glutathione synthase	NA	NA	NA	NA
WP_021546935.1\|179584_180589_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_108168473.1\|180770_181043_-	hypothetical protein	NA	NA	NA	NA
WP_032193599.1\|181087_181792_-	RepB family plasmid replication initiator protein	I3WF20	Macacine_betaherpesvirus	6.4e-20	28.7
WP_001067855.1\|181821_182526_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_040178261.1\|182550_183801_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_042973484.1\|184040_184682_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_039819674.1\|184922_185273_-	hypothetical protein	NA	NA	NA	NA
WP_001082319.1\|185504_186308_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_000480968.1\|186307_187144_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_000018321.1\|187479_188295_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.8e-160	98.2
WP_001067855.1\|188588_189293_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_3

233337 : 262135

Escherichia_phage(46.15%)

integrase,transposase

attL 243421:243480|attR 260596:261416

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000219087.1\|233337_234576_-\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.5e-11	23.1
WP_000589001.1\|234997_236338_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000137794.1\|236768_237374_-	hypothetical protein	NA	NA	NA	NA
WP_000703842.1\|237590_237872_-	hypothetical protein	NA	NA	NA	NA
WP_000633161.1\|238247_238559_-	hypothetical protein	NA	NA	NA	NA
WP_000814953.1\|238781_238982_-	hypothetical protein	NA	NA	NA	NA
WP_000551490.1\|239021_239246_-	hypothetical protein	NA	NA	NA	NA
WP_000781547.1\|239300_239504_-	hypothetical protein	NA	NA	NA	NA
WP_024143014.1\|239683_239977_-	hypothetical protein	I7B2L9	Escherichia_phage	4.1e-05	38.6
WP_001371932.1\|240056_240548_-	DUF3085 domain-containing protein	NA	NA	NA	NA
WP_001165367.1\|240552_240864_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_024181853.1\|241065_241284_-	hypothetical protein	NA	NA	NA	NA
WP_000071366.1\|241380_241701_-	hypothetical protein	NA	NA	NA	NA
WP_001371935.1\|241879_242110_-	hypothetical protein	NA	NA	NA	NA
243421:243480	attL	NA	NA	NA	NA
WP_001067855.1\|243483_244188_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000842134.1\|244677_245787_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.8e-33	30.2
WP_001039466.1\|245881_247066_-	tetracycline efflux MFS transporter Tet(D)	NA	NA	NA	NA
WP_000113282.1\|247161_247818_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_001067855.1\|247829_248534_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001550559.1\|248567_249059_-	hypothetical protein	NA	NA	NA	NA
WP_001446887.1\|249165_249903_+	resolvase	NA	NA	NA	NA
WP_000743213.1\|249899_250124_+	hypothetical protein	NA	NA	NA	NA
WP_000954592.1\|250245_250422_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_000427619.1\|250603_251608_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_042863651.1\|251686_254653_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.8
WP_001067855.1\|254773_255478_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_108168476.1\|255514_256534_-\|integrase	integrase/recombinase	A0A1P8DJJ6	Virus_Rctr41k	1.1e-71	45.5
WP_032488579.1\|256710_257265_+	aminoglycoside N-acetyltransferase AAC(6')-Ib3	NA	NA	NA	NA
WP_012695455.1\|257492_258233_-	hypothetical protein	U5N3V8	Enterobacteria_phage	4.4e-43	41.7
WP_077249983.1\|258219_259728_-\|transposase	IS21-like element ISCfr8 family transposase	A0A2L1IVA1	Escherichia_phage	9.9e-26	32.7
WP_001067855.1\|259887_260592_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000376623.1\|260667_261168_-	N-acetyltransferase	NA	NA	NA	NA
WP_001993321.1\|261186_261366_+	hypothetical protein	NA	NA	NA	NA
WP_000259031.1\|261295_262135_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
260596:261416	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP028536

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP028538

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP028537

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection