CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP027605	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence	0 crisprs	DEDDh	0	2
NZ_CP027604	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 chromosome, complete genome	2 crisprs	RT,cas3,DEDDh,WYL,csa3,DinG	1	9
NZ_CP027606	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed2, complete sequence	0 crisprs	NA	0	4

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1579 : 19938

Salmonella_phage(73.68%)

tail,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164908659.1\|1579_1981_+\|tail	tail fiber domain-containing protein	J9Q6E3	Salmonella_phage	2.8e-60	94.2
WP_040110304.1\|2045_2834_+	receptor-recognizing protein	E5DHZ0	Enterobacter_phage	3.9e-58	63.5
WP_000064173.1\|2908_3232_+	hypothetical protein	J9Q6E7	Salmonella_phage	1.4e-46	92.5
WP_006812500.1\|3245_3938_+	membrane protein	J9Q7Y7	Salmonella_phage	3.9e-126	96.1
WP_040110303.1\|3939_4191_+	hypothetical protein	J9Q7R6	Salmonella_phage	5.4e-30	88.0
WP_080332520.1\|4141_4348_+	hypothetical protein	J9Q7G2	Salmonella_phage	8.1e-24	80.0
WP_016582627.1\|4375_4900_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_016582626.1\|4903_5173_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_023315962.1\|5589_6255_+	AAA family ATPase	J9Q7R7	Salmonella_phage	4.7e-113	95.0
WP_160956455.1\|6260_6614_+	hypothetical protein	J9Q7G3	Salmonella_phage	2.2e-45	100.0
WP_077990606.1\|6655_7453_-	DUF2971 domain-containing protein	J9Q7Y9	Salmonella_phage	2.1e-11	26.1
WP_006812583.1\|7716_8442_+	hypothetical protein	J9Q7R8	Salmonella_phage	3.8e-140	99.2
WP_000027057.1\|8994_9855_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001235713.1\|10037_10595_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_001143760.1\|10758_13764_+\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	100.0
WP_040110300.1\|15002_16118_+	DNA primase	J9Q720	Salmonella_phage	3.6e-214	97.0
WP_006812580.1\|16198_16993_+	hypothetical protein	J9Q7Z0	Salmonella_phage	2.9e-141	96.6
WP_032666393.1\|17293_17551_+	hypothetical protein	J9Q7R9	Salmonella_phage	4.4e-35	96.5
WP_006812578.1\|17585_18908_+	DNA ligase	J9Q7G5	Salmonella_phage	1.8e-257	98.9
WP_006812577.1\|19067_19280_+	hypothetical protein	J9Q6I3	Salmonella_phage	3.7e-32	98.6
WP_003100847.1\|19380_19938_-	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2

DBSCAN-SWA_2

25574 : 111198

102

Salmonella_phage(93.62%)

tail,integrase,terminase,portal

attL 26450:26465|attR 36135:36150

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000067984.1\|25574_25880_+	hypothetical protein	J9Q7S1	Salmonella_phage	9.2e-48	98.0
26450:26465	attL	NA	NA	NA	NA
WP_006812573.1\|27061_27895_+	phosphate starvation-inducible protein PhoH	W8D063	Erwinia_phage	2.3e-88	63.6
WP_022649890.1\|27905_28109_+	hypothetical protein	A0A2P1CDD4	Klebsiella_phage	5.6e-09	50.7
WP_006812571.1\|28124_28490_+	hypothetical protein	K7PH35	Enterobacteria_phage	5.1e-37	66.4
WP_006812570.1\|28489_28735_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.0e-12	44.9
WP_006812569.1\|28831_29356_+	hypothetical protein	NA	NA	NA	NA
WP_006812568.1\|29346_29763_+	hypothetical protein	NA	NA	NA	NA
WP_023315967.1\|29936_31043_+\|integrase	site-specific integrase	A0A1P8DTG6	Proteus_phage	5.6e-26	32.6
WP_004110129.1\|31034_31421_-	transcriptional regulator	NA	NA	NA	NA
WP_004110118.1\|31684_31897_+	hypothetical protein	NA	NA	NA	NA
WP_006812566.1\|32006_34373_+	porphyrin biosynthesis protein	J9Q7G6	Salmonella_phage	0.0e+00	94.5
WP_004110112.1\|34469_35705_+	AAA domain-containing protein	J9Q733	Salmonella_phage	2.3e-238	99.3
WP_074136117.1\|35885_38249_+	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	93.8
36135:36150	attR	NA	NA	NA	NA
WP_023315970.1\|38251_38947_+	hypothetical protein	Q854L3	Mycobacterium_phage	1.4e-19	45.1
WP_074136122.1\|38966_40136_+	uracil-DNA glycosylase	J9Q7Z2	Salmonella_phage	7.8e-212	95.4
WP_160389865.1\|40150_40576_+	hypothetical protein	J9Q7S4	Salmonella_phage	1.7e-71	99.3
WP_052255174.1\|40607_41531_-	DUF4365 domain-containing protein	NA	NA	NA	NA
WP_040110290.1\|41657_42089_+	hypothetical protein	J9Q6I8	Salmonella_phage	8.9e-73	99.3
WP_040110289.1\|42208_43237_+	hypothetical protein	J9Q7Z3	Salmonella_phage	4.1e-164	99.7
WP_040110288.1\|43297_44242_+	exonuclease	J9Q7S6	Salmonella_phage	2.2e-180	99.0
WP_000920226.1\|44241_44508_+	hypothetical protein	J9Q7G8	Salmonella_phage	1.6e-40	100.0
WP_162183712.1\|44555_45587_+	recombinase	J9Q736	Salmonella_phage	1.3e-194	98.8
WP_040110286.1\|45678_45879_+	hypothetical protein	J9Q6J0	Salmonella_phage	6.7e-23	92.3
WP_004110049.1\|45882_46713_+	hypothetical protein	J9Q7Z4	Salmonella_phage	1.1e-127	99.3
WP_004110046.1\|46875_47247_+	DUF2591 domain-containing protein	J9Q7S7	Salmonella_phage	1.0e-69	99.2
WP_108082292.1\|47230_47641_+	hypothetical protein	J9Q7G9	Salmonella_phage	1.1e-75	97.8
WP_040110285.1\|47709_47985_+	hypothetical protein	J9Q738	Salmonella_phage	2.3e-45	95.6
WP_004110033.1\|48201_48537_+	hypothetical protein	J9Q7Z5	Salmonella_phage	1.6e-56	99.1
WP_006812558.1\|48536_48749_+	hypothetical protein	J9Q7S8	Salmonella_phage	3.1e-34	98.6
WP_040110284.1\|49317_50382_-	replication protein RepA	J9Q7H0	Salmonella_phage	7.9e-187	98.0
WP_022649908.1\|51125_51770_+	hypothetical protein	J9Q739	Salmonella_phage	2.2e-123	99.1
WP_040110283.1\|51845_52340_+	GNAT family acetyltransferase	J9Q6J3	Salmonella_phage	7.3e-87	97.0
WP_040110282.1\|52371_52875_-	hypothetical protein	J9Q7Z6	Salmonella_phage	2.1e-89	97.6
WP_040110281.1\|53103_54189_+	exonuclease	J9Q7S9	Salmonella_phage	1.7e-205	98.3
WP_160859089.1\|55831_56335_+	SMC family ATPase	J9Q741	Salmonella_phage	8.2e-86	99.4
WP_006812552.1\|56324_57071_+	hypothetical protein	J9Q6J5	Salmonella_phage	3.4e-136	98.4
WP_002214145.1\|57082_57652_+	hypothetical protein	J9Q7Z7	Salmonella_phage	5.8e-104	100.0
WP_040110279.1\|57729_60045_+	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	99.6
WP_040110278.1\|60152_61295_+	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	2.9e-219	99.7
WP_040110277.1\|61377_62247_+	phosphoribosyl-ATP pyrophosphohydrolase	J9Q742	Salmonella_phage	1.8e-160	99.3
WP_040110276.1\|62436_63540_+	thymidylate synthase	J9Q6J6	Salmonella_phage	4.4e-217	98.4
WP_162183711.1\|63559_63955_+	hypothetical protein	J9Q7Z8	Salmonella_phage	7.9e-68	96.9
WP_160859086.1\|63957_64428_+	dihydrofolate reductase	J9Q7T1	Salmonella_phage	2.0e-89	100.0
WP_040110274.1\|64427_65072_+	AAA family ATPase	J9Q7H4	Salmonella_phage	1.5e-116	99.5
WP_040110273.1\|65135_65555_+	hypothetical protein	J9Q743	Salmonella_phage	3.2e-67	97.1
WP_040110272.1\|65564_66107_+	3'-5' exonuclease	J9Q6J8	Salmonella_phage	4.2e-96	97.2
WP_004109984.1\|66145_67252_-	DUF697 domain-containing protein	NA	NA	NA	NA
WP_040110271.1\|67462_68305_+	hypothetical protein	J9Q7Z9	Salmonella_phage	4.4e-108	92.1
WP_004109976.1\|68490_69084_+	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	2.1e-112	100.0
WP_108082293.1\|69286_69523_+	hypothetical protein	J9Q7H5	Salmonella_phage	9.0e-35	98.7
WP_040110269.1\|70859_71354_+	hypothetical protein	J9Q6J9	Salmonella_phage	4.9e-83	99.4
WP_040110268.1\|71522_73592_-	hypothetical protein	NA	NA	NA	NA
WP_040110267.1\|73981_75667_+	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	0.0e+00	98.9
WP_040110266.1\|75725_76415_+	hypothetical protein	J9Q6K2	Salmonella_phage	6.8e-123	97.4
WP_040110265.1\|76411_76693_+	hypothetical protein	J9Q801	Salmonella_phage	1.9e-47	98.9
WP_040110264.1\|76695_77067_+	hypothetical protein	J9Q7T4	Salmonella_phage	1.2e-62	99.2
WP_040110263.1\|77158_77800_+	HD domain-containing protein	J9Q7H7	Salmonella_phage	7.0e-114	98.6
WP_040110262.1\|77796_78348_+	hypothetical protein	J9Q748	Salmonella_phage	2.8e-95	90.7
WP_040110261.1\|78386_79085_+	DUF1311 domain-containing protein	J9Q6K3	Salmonella_phage	6.0e-111	89.7
WP_040110260.1\|79140_79344_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	3.7e-29	95.5
WP_040110259.1\|79533_79800_+	hypothetical protein	J9Q7T5	Salmonella_phage	3.4e-30	69.3
WP_040110258.1\|79885_80122_+	DUF1380 domain-containing protein	J9Q7H8	Salmonella_phage	7.9e-39	96.2
WP_040110257.1\|80118_80439_+	hypothetical protein	J9Q750	Salmonella_phage	1.3e-57	93.4
WP_157842145.1\|80685_80850_+	hypothetical protein	NA	NA	NA	NA
WP_006812532.1\|82288_82531_-	hypothetical protein	J9Q751	Salmonella_phage	8.9e-38	93.8
WP_032655918.1\|82676_82898_+	hypothetical protein	J9Q6K7	Salmonella_phage	1.2e-33	95.8
WP_160859106.1\|82905_83121_+	hypothetical protein	J9Q804	Salmonella_phage	4.1e-34	97.2
WP_006812530.1\|83261_83573_+	hypothetical protein	J9Q7T7	Salmonella_phage	1.2e-47	97.1
WP_006812529.1\|83701_84097_+	hypothetical protein	J9Q7I1	Salmonella_phage	2.0e-42	66.2
WP_160859095.1\|84307_84505_+	hypothetical protein	J9Q753	Salmonella_phage	1.6e-32	98.5
WP_006812526.1\|84710_85193_+	hypothetical protein	J9Q805	Salmonella_phage	2.5e-87	97.5
WP_016051712.1\|85836_86040_-	hypothetical protein	J9Q7I3	Salmonella_phage	1.3e-29	100.0
WP_040110254.1\|86090_86741_-	hypothetical protein	J9Q754	Salmonella_phage	2.1e-113	99.1
WP_006812523.1\|87064_87592_-	transcriptional regulator	J9Q6L0	Salmonella_phage	2.6e-82	99.3
WP_000683475.1\|87596_88019_-	hypothetical protein	J9Q806	Salmonella_phage	8.2e-63	85.7
WP_001291547.1\|88078_88357_-	hypothetical protein	J9Q7T9	Salmonella_phage	3.4e-41	98.9
WP_006812522.1\|88359_89919_-	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	4.4e-295	99.6
WP_032634983.1\|89983_90682_+	ParB N-terminal domain-containing protein	J9Q756	Salmonella_phage	2.5e-125	99.1
WP_040110316.1\|90681_91350_+	ParB N-terminal domain-containing protein	J9Q6L1	Salmonella_phage	4.3e-114	99.1
WP_016051719.1\|91346_91985_+	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	3.8e-112	100.0
WP_001113021.1\|91977_92232_+	hypothetical protein	J9Q7U0	Salmonella_phage	4.1e-41	98.8
WP_002211789.1\|92237_93128_+	hypothetical protein	J9Q7I6	Salmonella_phage	6.2e-169	99.7
WP_000176291.1\|93137_93404_+	hypothetical protein	J9Q757	Salmonella_phage	1.3e-42	100.0
WP_006812517.1\|93601_94243_+	hypothetical protein	J9Q6D4	Salmonella_phage	3.4e-108	98.1
WP_002211787.1\|94245_95502_+\|terminase	terminase	J9Q7Y2	Salmonella_phage	1.8e-251	100.0
WP_040110315.1\|95535_97110_+\|portal	phage portal protein	J9Q7R1	Salmonella_phage	3.2e-301	99.2
WP_040110314.1\|97132_98029_+	hypothetical protein	J9Q7F4	Salmonella_phage	5.1e-147	98.0
WP_040110313.1\|98055_98931_+	hypothetical protein	J9Q710	Salmonella_phage	1.9e-162	99.7
WP_040110312.1\|99005_99929_+	Ig domain-containing protein	J9Q6D6	Salmonella_phage	9.9e-154	98.4
WP_040110311.1\|99972_100407_+	hypothetical protein	J9Q7Y3	Salmonella_phage	1.4e-73	99.3
WP_040110310.1\|100406_101240_+	hypothetical protein	J9Q7R2	Salmonella_phage	5.8e-153	99.6
WP_040110309.1\|101337_101682_+	hypothetical protein	J9Q7F6	Salmonella_phage	5.5e-57	99.1
WP_040110308.1\|101672_102146_+	hypothetical protein	J9Q711	Salmonella_phage	2.0e-81	99.4
WP_000469441.1\|102147_102531_+	hypothetical protein	J9Q6D8	Salmonella_phage	1.7e-67	100.0
WP_040110307.1\|102605_103352_+	Ig domain-containing protein	J9Q7Y4	Salmonella_phage	6.6e-116	89.1
WP_000163862.1\|103412_103730_+	hypothetical protein	J9Q7R3	Salmonella_phage	6.0e-50	98.1
WP_000952684.1\|103855_104080_+	hypothetical protein	J9Q7F7	Salmonella_phage	4.2e-34	100.0
WP_040110306.1\|104087_108668_+	tape measure protein	J9Q712	Salmonella_phage	0.0e+00	90.6
WP_000440566.1\|108709_109045_+\|tail	phage tail protein	J9Q6E1	Salmonella_phage	5.7e-59	97.3
WP_016051624.1\|109134_109833_+\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	3.7e-137	100.0
WP_023316016.1\|109825_110623_+	hypothetical protein	J9Q7R4	Salmonella_phage	2.3e-154	95.5
WP_023316017.1\|110610_111198_+\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	1.9e-102	92.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP027604

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027604_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027604_1

2113958-2114072

Orphan

Consensus_repeat	Method
GCCCTCACCCCAGCCCTCTCCCACAGGGAGAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027604_1

>merge|NZ_CP027604|1|2113958-2114072|CRISPRCasFinder
GCCCTCACCCCAGCCCTCTCCCACAGGGAGAGGGAGCAAACACTAAAAACGGCAACGGGGTTGCCGTTTTGCTTTTACCTCGCCCTCACCCCGGCCCTCTCCCACAGGGAGAGGG

>NZ_CP027604|1|1|2113958-2114072|CRISPRCasFinder
GCCCTCACCCCAGCCCTCTCCCACAGGGAGAGGG	AGCAAACACTAAAAACGGCAACGGGGTTGCCGTTTTGCTTTTACCTC
GCCCTCACCCCGGCCCTCTCCCACAGGGAGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027604.1\|WP_022650565.1\|2121809_2122610_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182336
NZ_CP027604.1\|WP_022650568.1\|2124708_2125956_+\|enterobactin-transporter-EntS	unknown	unknown	gnl\|CDD\|236700
NZ_CP027604.1\|WP_022650562.1\|2114089_2116330_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|237410
NZ_CP027604.1\|WP_022650569.1\|2126002_2126962_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236806
NZ_CP027604.1\|WP_003858827.1\|2106516_2107104_-\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NZ_CP027604.1\|WP_022650557.1\|2109404_2109689_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225495
NZ_CP027604.1\|WP_032645860.1\|2116476_2117676_+\|enterochelin-esterase	unknown	unknown	gnl\|CDD\|236695
NZ_CP027604.1\|WP_022650567.1\|2123595_2124600_-\|Fe(3+)-siderophore-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182464
NZ_CP027604.1\|WP_003858831.1\|2103352_2105017_-\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NZ_CP027604.1\|WP_003858806.1\|2117686_2117899_+\|MbtH-family-NRPS-accessory-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP027604.1\|WP_022650561.1\|2113237_2113927_-\|enterobactin-synthase-subunit-EntD	unknown	unknown	gnl\|CDD\|182334
NZ_CP027604.1\|WP_022650559.1\|2110814_2111621_+\|iron/manganese-ABC-transporter-ATP-binding-protein-SitB	unknown	unknown	gnl\|CDD\|185016
NZ_CP027604.1\|WP_022650555.1\|2105030_2106503_-\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NZ_CP027604.1\|WP_022647369.1\|2111617_2112466_+\|iron/manganese-ABC-transporter-permease-subunit-SitC	unknown	unknown	gnl\|CDD\|334323
NZ_CP027604.1\|WP_072139725.1\|2122606_2123596_-\|iron-enterobactin-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182463
NZ_CP027604.1\|WP_022650556.1\|2107232_2109266_+\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NZ_CP027604.1\|WP_022650564.1\|2117895_2121753_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	unknown	unknown	gnl\|CDD\|236668
NZ_CP027604.1\|WP_022650558.1\|2109900_2110812_+\|iron/manganese-ABC-transporter-substrate-binding-protein-SitA	unknown	unknown	gnl\|CDD\|238557
NZ_CP027604.1\|WP_022650560.1\|2112462_2113302_+\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_CP027604.1\|WP_022650570.1\|2127150_2128326_+\|isochorismate-synthase-EntC	unknown	unknown	gnl\|CDD\|184977

Protein	Function_ID	Function_description	E-value
NZ_CP027604.1\|WP_022650565.1\|2121809_2122610_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182336	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein.	0
NZ_CP027604.1\|WP_022650568.1\|2124708_2125956_+\|enterobactin-transporter-EntS	gnl\|CDD\|236700	PRK10489, PRK10489, enterobactin transporter EntS.	0
NZ_CP027604.1\|WP_022650562.1\|2114089_2116330_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|237410	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor.	0
NZ_CP027604.1\|WP_022650569.1\|2126002_2126962_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236806	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional.	0
NZ_CP027604.1\|WP_003858827.1\|2106516_2107104_-\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	3.33362e-117
NZ_CP027604.1\|WP_022650557.1\|2109404_2109689_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	4.42847e-14
NZ_CP027604.1\|WP_032645860.1\|2116476_2117676_+\|enterochelin-esterase	gnl\|CDD\|236695	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional.	0
NZ_CP027604.1\|WP_022650567.1\|2123595_2124600_-\|Fe(3+)-siderophore-ABC-transporter-permease	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	3.57166e-175
NZ_CP027604.1\|WP_003858831.1\|2103352_2105017_-\|choline-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	0
NZ_CP027604.1\|WP_003858806.1\|2117686_2117899_+\|MbtH-family-NRPS-accessory-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	6.57585e-27
NZ_CP027604.1\|WP_022650561.1\|2113237_2113927_-\|enterobactin-synthase-subunit-EntD	gnl\|CDD\|182334	PRK10251, PRK10251, enterobactin synthase subunit EntD.	6.17909e-70
NZ_CP027604.1\|WP_022650559.1\|2110814_2111621_+\|iron/manganese-ABC-transporter-ATP-binding-protein-SitB	gnl\|CDD\|185016	PRK15056, PRK15056, manganese/iron ABC transporter ATP-binding protein.	0
NZ_CP027604.1\|WP_022650555.1\|2105030_2106503_-\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NZ_CP027604.1\|WP_022647369.1\|2111617_2112466_+\|iron/manganese-ABC-transporter-permease-subunit-SitC	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	6.83391e-81
NZ_CP027604.1\|WP_072139725.1\|2122606_2123596_-\|iron-enterobactin-ABC-transporter-permease	gnl\|CDD\|182463	PRK10440, PRK10440, iron-enterobactin ABC transporter permease.	0
NZ_CP027604.1\|WP_022650556.1\|2107232_2109266_+\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP027604.1\|WP_022650564.1\|2117895_2121753_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0
NZ_CP027604.1\|WP_022650558.1\|2109900_2110812_+\|iron/manganese-ABC-transporter-substrate-binding-protein-SitA	gnl\|CDD\|238557	cd01137, PsaA, Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	9.21772e-151
NZ_CP027604.1\|WP_022650560.1\|2112462_2113302_+\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	2.29497e-72
NZ_CP027604.1\|WP_022650570.1\|2127150_2128326_+\|isochorismate-synthase-EntC	gnl\|CDD\|184977	PRK15016, PRK15016, isochorismate synthase EntC; Provisional.	0

>NZ_CP027604.1|WP_022650561.1|2113237_2113927_-|enterobactin-synthase-subunit-EntD
MHTTHSTFSLAGHTLHRITFDPTTFTDADLLWLPHHAQLANAGRKRKADHLAGRIAAAHALPDYTMPAIGPSGEPLWPQGISGSITHSGTQAIAVVTQYPALIGIDCETILSENEAREIKDGIIDTQEEPVLFRLGYPFALALTLVFSAKESLFKALFPQVQAWMGFDCARVTMLDDKTLTLALTCQLADFQEGTAFPLHWQQHGEQVITLLSHAPGDEPSRWSPQTSR
>NZ_CP027604.1|WP_022650560.1|2112462_2113302_+|metal-ABC-transporter-permease
MMTLLLEPFQFAFMNNALLISLLVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWMMGLPLALGAFVAGLFCAVATGYLKDNSRIKQDTVMGIVFSGMFGAGLILYIAVKPEVHLDHILFGDMLGINVMDILQSGLVAGLIALVIGLKWRDFLLFCFDYQQAQASGLRTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAVAVLITRRFHMALLVAVAVSALVSVSGVYASFYLDSAPAPTIVVLFAMVFIVTFVVTSVKARRQERVTAE
>NZ_CP027604.1|WP_022647369.1|2111617_2112466_+|iron/manganese-ABC-transporter-permease-subunit-SitC
MNALLEPFGYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIAPEDIVQLAIIGVVSIVILLFKWKDLMVTFFDENHARAIGLRPERLKILFFTLLAVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVAIGSITSFLGAWASYYLDGATGGIIVVAQTLLFLLAFVFAPKHGLLASRRRAREAHP
>NZ_CP027604.1|WP_022650559.1|2110814_2111621_+|iron/manganese-ABC-transporter-ATP-binding-protein-SitB
MQKGIVVTDVTVTYRNGHTALRDASFSVPGGSIAALVGVNGSGKSTLFKAVMGFVRAASGTISILGLPPHRALRQNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGFLRRPKECDKQIVTDALKRVDMLELRHRQIGELSGGQKKRVFLARAIAQQGEVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMVKGTVLASGPTDITFTAENLERAFSGVLRHVVLSGSEDRIITDDERPFVAHRQEAK
>NZ_CP027604.1|WP_022650558.1|2109900_2110812_+|iron/manganese-ABC-transporter-substrate-binding-protein-SitA
MHPRQGLKRLLLGALLMTATTTGALAAEKFQVITTFTVIADMAKNVAGDAAEVTSITKPGAEIHEYQPTPGDIKRAQKAQLILANGMNLELWFQRFYQHLNGVPEVVVTKGITPMGISEGPYNGKPNPHAWMSPDNALIYVDNIRDALVKYDPANAQIYQRNADAYKQKITATLEPLRKQVAEIPEDKRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVIDLVKKHHIPAVFSESTVSDKPARQVARETGAHYGGVLYVDSLSAENGPVPTYIDLLNVTTRTLVQGIRDGMKE
>NZ_CP027604.1|WP_022650557.1|2109404_2109689_+|helix-turn-helix-domain-containing-protein
MSIFDELKTSLEEAVEIHSGRKAASRVTRYEVADVRAIREQLNITQSEMAKALGTSVDTIKSWESKRRNPTGLAAKVLNVIRENPAFYKALAGQ
>NZ_CP027604.1|WP_022650556.1|2107232_2109266_+|choline-BCCT-transporter-BetT
MTDLSQDREKDKINPVVFYTSAGLILLFSLTTIFFRDFSAEWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTMEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKKINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPTEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVMGTLIIPFTFTLLWLSIFGNSALHEIIHGNATFAQEAMAHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSKLKDINSDAPNWLRIFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRVSASRDTAPRPLGAQDRLSWKKRLSRLMNYPGTRYTKQMMETVCFPAMEEVAQELKLRGAYVELKNLPPEEGENLGHLDLLVHMGDEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGNSVMFPDA
>NZ_CP027604.1|WP_003858827.1|2106516_2107104_-|transcriptional-regulator-BetI
MPKVGMQPIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFKDKNGLLEATMRDITGQLRDAVLSRLRALPDGSAEQRLQAIVGGNFDETQVSGAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAEEAGYGLAALIDGLWLRAALSGKPLDKTLAQSLTSHFISQHLPTD
>NZ_CP027604.1|WP_022650555.1|2105030_2106503_-|betaine-aldehyde-dehydrogenase
MSRMAEQQLYINGGYTSATSGRTFETINPANGEVLATVQAAGREDVDRAVESAKRGQKIWAAMTAMERSRILRRAVDILRERNDELATLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKFKAAFEQKIVERVGRIRAGDLFDEATNFGPMVSFPHRDSVMRYIAKGKEEGARVLCGGDVLKGEGFDNGAWVAPTVFTDCTDEMTIVREEIFGPVMSILTYESIEEAIRRANDTDYGLAAGIVTTDLNRAHGAIHQLEAGICWINTWGESAAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMGKFQSIF
>NZ_CP027604.1|WP_003858831.1|2103352_2105017_-|choline-dehydrogenase
MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPYMNNRRMECGRGKGLGGSSLINGMCYVRGNAMDLDNWAKEPGLEHWSYLNCLPYYRKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKPRPNLTIRTHAMTDHIIFDGKRAVGVEWLEGESTIPSKATAKKEVLLCAGAIASPQILQRSGVGNAELLKQFDIPLVHDLPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFEWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDKYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIADAIRGREPLAKSTAAYYVANGAPVRR
>NZ_CP027604.1|WP_022650562.1|2114089_2116330_-|TonB-dependent-siderophore-receptor
MNKKIHSLALLVNLGIYGVALPAMADDNTASAQNEDTMVITAAEQNLQAPGVSTITADEIRKNPPARDVAEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSIRLGWRGERDTRGDTGWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKKFDDQWHGSWNTYLNAPEHKDEGSTKRTNFSLSGPLGGDFSFRMYGNLDKTQADAWDINQGHQSDRTGAYANTLPAGREGVENKDINGVVRWDFAPMQSLEFEAGYSRQNNLYAGDTQNTNNDNALVKKNYGKETNRIYRQNFAVTWNGGWDNGITTSNWAQYEHTRNSRLGEGLAGGLEGLFNSNKFTDTDLADVMLHSEINLPIDFIVNQNLTLGTEWNQQRMKDSTSFTQTQQGGTIPGMSEDRSPYTSAEIFSLFAENNMELTDSTMLTPALRFDHHTIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYLLYSKGQGCYASSDGVGCYMMGNDDLKAETSINKEIGLEWKRDGWLAGVTWFRNDYRNKIEAGYAPIGQTSTGKVTTDIYQWENVPKAVVEGLEGSLNVPVSDTINWTNNITYMLQSKNKETGDRLSIIPEYTLNSTLSWQVRQDVSLQSTFTWYGKQQPKKYNYKGQPVTGSEKDEVSPYSIVGLSATWDVTKNVSLTGGVDNVFDKRQWRAGNAQTTGNTTTGAYMYGAGAYTYNEPGRTWYMSVNTRF
>NZ_CP027604.1|WP_032645860.1|2116476_2117676_+|enterochelin-esterase
MTALTTGSEAWWQTKNGPERERHQENYRVTFWWRDPAGTQKTSTVKRVWLYVTGVTDHHQNARPQSLERIPDTDVWQWQGEFSPEWRGSYCFIPSDNENDFADAVFEGEQPDRMALREGWRKLLPHAVSDPLNPQSWRGGRGHAVSALEMPEAPVQPGWNHPDTPYNKPVCIDWHSARLKNRRRVWIFTTGDESPERPLAVLLDGQFWAESMPVWPALASLTHEGKLPPAVYVLIDVIDTAHRSRELPCNPDFWLAVQEELLPQVKSMAPFSDRADHTVVAGQSFGGLSSLYAGLNWPQRFGCILSQSGSYWWPHRGAQQDGLLIEQLKAGEKTARGLRIVLEAGRNEPLILRANQAIFAELHTQQPVFWRQVDGGHDALCWRGGLTQGLMTLWQPLIQ
>NZ_CP027604.1|WP_003858806.1|2117686_2117899_+|MbtH-family-NRPS-accessory-protein
MEFSNPFDNPQGQFAILQNDQGQYSLWPQQCELPAGWRVVCEPQSQEACQQWLAEQWQTLEPFYFAGERA
>NZ_CP027604.1|WP_022650564.1|2117895_2121753_+|enterobactin-non-ribosomal-peptide-synthetase-EntF
MNRLPLVAAQPGIWMAEQLSSLPNAWSAAHYTELKGAIDAPLLAKAIAEGMMQADTLRMRFAEDHGEVWQWIDEAMLLPEPSIVRVDSHDAAVALMEADLKQNLRVDSGQPLAFHQLIQVGESHWYWYQRYHHLVVDGFSFPAITRQIAAIYAAWQKGEPAPASPFTPFAEVVEEYQRYRDSEAYQRDGAFWAEQRQQLPSPVSLSSAPLPGHAATTDILRLKMAMDGRAFSQLAQMAGQAQRTDLALALVVLWLGRLTGRLDYAAGFIFMRRMGSAALTATGPVLNVLPLAVNIRPHESLPELALRLANQLKKMRRHQRYDAEQIVRNSGRAAGDEALFGPVLNVKVFDYQLDIDGVEAITHTLATGPVNDLELALFPDEQGGLSIEILANGQRYDEATLKGHAARLNAMLTQFAANPDLRCGDVDTVSEQEYARLARINDTGLALPSTTLADLVAEQASKTPDAPALADAHTELNYRQMREQVVALANLLRARGVKPGDSVAVALPRSVFLTLALHGIVEAGAAWLPLDTGYPDDRLRMMLEDAKPSLLITTDEQLPRFSDLSVETFSYNTLLPTSGAEPLRLAKPEQTAYIIFTSGSTGRPKGVMVGHTAIVNRLKWMQDHYPLTAHDVVAQKTPCSFDVSVWEFWWPFIAGAKLVMAEPDAHRDPQAMQSFFAEYGVTTTHFVPSMLAAFVASLTPENAHCCRTLKQVFCSGEALPTALCREWEQLTHAPLHNLYGPTEAAVDVSWYPAYGPELAAVEGNSVPIGFPVWNTGLRILDAMMRPVPFGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRAMLSLPDVAQAVAHACVFNQAAATGGDARQLVGYVVSESGLPLDRDALLASLKAQLPPHMVPVVLLQISALPLSANGKLDRKALPLPELTSRTSGRAPETQTEVAVAQAFSSLLGCAVNDIEADFFALGGHSLLAMRLAAQLSRAFSRKVTPGQIMVASTVSKLSALLDSQMSDEQAQRLGYETLLPLRESNGPTLFCFHPASGFAWQFSVLARYLSPRWSIVGIQSPRPNGPMQQCADLDGVIEHHLNTLRKQQPQGPYYLFGYSLGGTLAQGIAARLREQGEAVAFLGLLDTWPPETQNWAEKEANGLDPAVLAEIERERQAFIAAQQGQGSSELFNAIEGNYADAVRLLTTAHSARFDGKATLFVAERTRTQDPQAAWAPWVGELEVYSQDCAHVDIISPQAFEKIGPVLKEILG
>NZ_CP027604.1|WP_022650565.1|2121809_2122610_-|iron-enterobactin-ABC-transporter-ATP-binding-protein
MTDLTTRLRGENLTLGYGKKIIARDLSVAIPDGHFTAIIGPNGCGKSTLLRTLSRLMSPVEGSVFLDGEQIQRFASKEVARRIGLLAQNATTPGDITVQELVSRGRYPHQPLFTRWRKEDDEAVKRAMQATGITELAQQSVDTLSGGQRQRAWIAMVLAQETSIMLLDEPTTWLDISHQIDLLELLSELNRTQGYTLAAVLHDLNQACRYATHLIALRDGEIVAQGAPKEIVTPELIARIYGMRCMIIDDPVAGTPLVVPLGKRAV
>NZ_CP027604.1|WP_072139725.1|2122606_2123596_-|iron-enterobactin-ABC-transporter-permease
MAPSRRLLTSVALLVVACLLLAVWSLQSGAVTLDFAQVFHALTGSAPRNITMVVTEWRLPRVAMAILVGAALGVSGAIFQSLMRNPLGSPDVMGLNTGAWSGVLVAMVLFGQHLTAITFTAMAGGILTSLLIWALAWRNGIDTFRLIIIGIGIRAMLMAFNTWLLLQASLETALSAGLWYAGSLNGLTWVKTWPAAPLIILMFIGALLLVRRMRLLEMGDDSACALGVSVERSRLMLMLVAVLLTAASTAIAGPISFIALVAPHIARRLSGTARWGLTQAALCGAVLLLAADLCAQRLFTPYQLPVGVVTVSLGGIYLIVLLVQESRKK
>NZ_CP027604.1|WP_022650567.1|2123595_2124600_-|Fe(3+)-siderophore-ABC-transporter-permease
MSFSSSAVRALAVPVLLLLLILAIALSLLVGAKPLPASVIVDALSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGILGVNSGASFAIVLGAALFGFTSPSEQLVMAFCGALAASLVVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLSNGIALLNPDVYDQLRFWQAGSLDIRTLETLKVVVIPASVAAAVALCLSRALNSLSLGSDTATALGNRVARTQLTGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADVLGRLLVPGELRVSVVSAFIGAPVLIFLVRRRRGGGA
>NZ_CP027604.1|WP_022650568.1|2124708_2125956_+|enterobactin-transporter-EntS
MNQKSWLLNLSLLKTHPAYRAVFIARFISILSLGLLGVAVPVQIQTITHSSWLVGLSVTLTGGAMFIGLMVGGVLADRYERKKLILLARGTCGVGFVGLCLNAMLPEPSLVAIYVLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMVGGLLLATGNVAWNYGLAAAGTFITTLTLLRLPLLPPPPQPREHPLKSLMAAIRFLFSNPLIGGIALLGGLLTMASAVRVLYPALAGEWQMSASEIGVLYAAIPLGAACGALTSGNLAQSARPGLIMLVATLASFIAIGFFSLMPVWALGVMCLVIFGWLSAVSSLLQYTLIQTQTPEGMLGRINGLWTAQNVTGDAIGAAILGGMGAIMTPVASASSSGFVLAMIGAILLVTLVELRRFRQEVALNDGAA
>NZ_CP027604.1|WP_022650569.1|2126002_2126962_-|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein
MKIAAVCRNALLLTGLFVLGLTSAAADDWPRQVSDSRGVHTLESKPTRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADAQGFLRQWGDIAKQRKVARLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSAIAPTLIINYDDKSWQELLTQLGTITGQERQAAERIAAFDKQLAQVKQQMKLPPQPVNAIVYTAAAHTANLWTTDSAQGKLLHQLGFTLADLPAGLQTSTSQGKRHDIIQLGGENLATGLNGEGLFVFAGDQKDVNAIYANPLLAHLPSVKNKRVWALGTETFRLDYYSAMLVLDRLNALFK
>NZ_CP027604.1|WP_022650570.1|2127150_2128326_+|isochorismate-synthase-EntC
MDTSLAEEVQHTATTLQADSFFFMSPYRSFTTSGCFARFSEPAVGGDDPAGPFQQKLAQAFRNAKNSGIAHPVMVGAIPFDTRKPSSLFIPQRWQTFSRPARQQSARYASGAQTLNVQQRSEIPPQPVFEEMVARAASLTATPQVNKVVLSRLIDIATDKQIDSSALMERLIAQNPASFNFHVPLEDGGVLLGASPELLLRKEGAHFSSLPLAGSARRQPDDVLDREAGTKLLASEKDRHEHDLVTQAMKTILEPRSHHLSMPASPQLITTPTLWHLATPVEGDARENENALTLACLLHPTPALSGFPHQAAKELIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCARLHQNTVRLFAGAGIVPASSPVGEWRETGVKLSTMLNVFGLH

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Crispr_ID: NZ_CP027604_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027604_2

2893798-2893921

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027604_2

>merge|NZ_CP027604|2|2893798-2893921|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACAGACGCAAGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP027604|2|2|2893798-2893921|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CAGACGCAAGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027604.1\|WP_022650932.1\|2884962_2886369_+\|DUF1996-domain-containing-protein	unknown	unknown	gnl\|CDD\|370451
NZ_CP027604.1\|WP_003857634.1\|2900041_2901067_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP027604.1\|WP_003857665.1\|2886425_2886566_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027604.1\|WP_022650936.1\|2892748_2892949_+\|cell-surface-composition-regulator-GlgS	unknown	unknown	gnl\|CDD\|179501
NZ_CP027604.1\|WP_039268864.1\|2894081_2895455_-\|MdtK-family-multidrug-efflux-MATE-transporter	unknown	unknown	gnl\|CDD\|234981
NZ_CP027604.1\|WP_003857652.1\|2891221_2891665_+\|type-VI-secretion-system-baseplate-subunit-TssE	unknown	unknown	gnl\|CDD\|274540
NZ_CP027604.1\|WP_003857638.1\|2899112_2900024_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP027604.1\|WP_003857629.1\|2902819_2903401_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP027604.1\|WP_003857641.1\|2896353_2897502_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP027604.1\|WP_039268863.1\|2886691_2887474_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293813
NZ_CP027604.1\|WP_022650934.1\|2890691_2891222_+\|type-VI-secretion-system-lipoprotein-TssJ	unknown	unknown	gnl\|CDD\|378947
NZ_CP027604.1\|WP_003857632.1\|2901364_2901454_+\|YnhF-family-membrane-protein	unknown	unknown	unknown
NZ_CP027604.1\|WP_032610209.1\|2891996_2892392_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182205
NZ_CP027604.1\|WP_003857639.1\|2897800_2899000_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP027604.1\|WP_003857647.1\|2893121_2893592_+\|Hsp20-family-protein	unknown	unknown	gnl\|CDD\|107227
NZ_CP027604.1\|WP_003857643.1\|2895680_2896322_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP027604.1\|WP_022650940.1\|2903523_2904282_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP027604.1\|WP_003857662.1\|2887546_2888182_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238449
NZ_CP027604.1\|WP_003857659.1\|2888210_2889806_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP027604.1\|WP_022650939.1\|2901615_2902782_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371

Protein	Function_ID	Function_description	E-value
NZ_CP027604.1\|WP_022650932.1\|2884962_2886369_+\|DUF1996-domain-containing-protein	gnl\|CDD\|370451	pfam09362, DUF1996, Domain of unknown function (DUF1996). This family of proteins are functionally uncharacterized.	3.09012e-31
NZ_CP027604.1\|WP_003857634.1\|2900041_2901067_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP027604.1\|WP_003857643.1\|2895680_2896322_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	5.19053e-120
NZ_CP027604.1\|WP_022650936.1\|2892748_2892949_+\|cell-surface-composition-regulator-GlgS	gnl\|CDD\|179501	PRK02922, PRK02922, cell surface composition regulator GlgS.	5.34664e-29
NZ_CP027604.1\|WP_039268864.1\|2894081_2895455_-\|MdtK-family-multidrug-efflux-MATE-transporter	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP027604.1\|WP_003857652.1\|2891221_2891665_+\|type-VI-secretion-system-baseplate-subunit-TssE	gnl\|CDD\|274540	TIGR03357, hypothetical_protein_Atu4338, type VI secretion system lysozyme-like protein. The description for Pfam family pfam04965 cites acidic lysozyme activity for some phage-encoded members. This family represents a different subgroup of the proteins from pfam04965, where all members are associated with bacterial type VI secretion system genomic contexts.	1.57425e-27
NZ_CP027604.1\|WP_003857638.1\|2899112_2900024_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP027604.1\|WP_003857629.1\|2902819_2903401_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	1.40399e-136
NZ_CP027604.1\|WP_003857641.1\|2896353_2897502_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP027604.1\|WP_039268863.1\|2886691_2887474_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293813	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YmaE and Nostoc all1228 proteins.Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. .	1.59533e-54
NZ_CP027604.1\|WP_022650934.1\|2890691_2891222_+\|type-VI-secretion-system-lipoprotein-TssJ	gnl\|CDD\|378947	pfam12790, T6SS-SciN, Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113. One of the virulence mechanisms of E coli is the production of toxins which it produces from dedicated machineries called secretion systems. Seven secretion systems have been described, which assemble from 3 to up to more than 20 subunits. These secretion systems derive from or have co-evolved with bacterial organelles such as ABC transporters (type I), type IV pili (type 2), flagella (type 3), or conjugative machines (type IV). The type VI secretion system (T6SS) is present in most pathogens that have contact with animals, plants, or humans. SciN is a lipoprotein tethered to the outer membrane and expressed in the periplasm of E coli and is essential for T6S-dependent secretion of the Hcp-like SciD protein and for biofilm formation.	1.04658e-38
NZ_CP027604.1\|WP_032610209.1\|2891996_2892392_+\|hypothetical-protein	gnl\|CDD\|182205	PRK10040, PRK10040, hypothetical protein; Provisional.	2.49139e-16
NZ_CP027604.1\|WP_003857639.1\|2897800_2899000_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP027604.1\|WP_003857647.1\|2893121_2893592_+\|Hsp20-family-protein	gnl\|CDD\|107227	cd06470, ACD_IbpA-B_like, Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 600-kDa structures. This elevated activity seen under heat shock conditions is retained for an extended period of time after the temperature is returned to normal. IbpA also forms multimers.	3.67422e-40
NZ_CP027604.1\|WP_022650940.1\|2903523_2904282_-\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.9126e-42
NZ_CP027604.1\|WP_003857662.1\|2887546_2888182_+\|carbonic-anhydrase	gnl\|CDD\|238449	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	1.47181e-91
NZ_CP027604.1\|WP_003857659.1\|2888210_2889806_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP027604.1\|WP_022650939.1\|2901615_2902782_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	2.13866e-99

>NZ_CP027604.1|WP_003857647.1|2893121_2893592_+|Hsp20-family-protein
MMTLRTFPVLNDLSDSLFADRFNRIDRLFSQLTGSTPLPSTPSYNIRRLGDNRYELTLSVPGWKESELEIETVGGQLNISGKREEEKTENGEEGWIHRGISRSDFRASYSLPEHVKVTGASLENGLLAIELHQDIPEEEKPQRIAINNNPAIEHKP
>NZ_CP027604.1|WP_022650936.1|2892748_2892949_+|cell-surface-composition-regulator-GlgS
MKRQDINALKNFDFLARSFARMYALGQPVDIDAVTGNMSNKQQAWFRERYDHYRKQAERARVIELR
>NZ_CP027604.1|WP_032610209.1|2891996_2892392_+|hypothetical-protein
MKMRILLLMVSVLFNMQADAARGRQPCSGSKGGIAHCTSDGRFVCNDGSLSQSKRFCSGYGASELPRQVKPSPSARKAQTKKRIAVKGQEQRVVENNAQFDTQPRQPTCAPLYMANKPGFTHLPICSGNQY
>NZ_CP027604.1|WP_003857652.1|2891221_2891665_+|type-VI-secretion-system-baseplate-subunit-TssE
MPRPSLYDMLYGNFAGGLDLHSVSEENQLILSVLDNMQRILNCRAGTLAHLPDYGLPDMTKILQGMPGTAHQLITTLSAVLLKYEPRLSRINVVMQEQIQPGELRYAIDAELKGVGLVRYGTEFMPEGRVLIRHLKQQQYLDNTARL
>NZ_CP027604.1|WP_022650934.1|2890691_2891222_+|type-VI-secretion-system-lipoprotein-TssJ
MKMAITAGKALAITLATLLTGCGLTQKVTDGTVAVTKSIFYRQVKTLHLDIQAREGVNNNAKGASLATVVRIYQLKERKAFDSTDYPSLFASDTQAIKADLVAEKDIRLRPGESVTLDMPMEESAQVVAVAGMFMAPDQVNDTWRITLTRDGLDPDKARVIEVSNNRLTLKPLEGE
>NZ_CP027604.1|WP_003857659.1|2888210_2889806_-|FAD-NAD(P)-binding-protein
MKKIAIIGSGPTGIYTFYSLLNNAAPLSITVFEKADQPGVGMPYSDEDNSRLMLANIASIEIPPIFITYLDWLKQQNAARLARYNVDSEKLHDRQFLPRILLGEYFHDRFLAVAAEAKKAGFHIEVHPNAEVTDIKADADGVALSVNDAPFSRRFDLAVVATGHVWPDENETTRAYFPSPWSGLMDAEVRACEVGIMGTSLSGLDAAMAVVMQHGRFSGKQFVVNKGSEGLKIMLMSRTGVLPEADFYCPIPYEPLSVLTDCVVESEIDKGPDGLLDRIFALMVKELELADPRWCQAIALGTLNADTLRDAWFEDRKKHGPFTWAEANLKEVERNKREKRTVAWRYTVLRLHEVVQAIVPSLNEHDRERFKSGLERVFIDNYAAIPPQSIRRLLALREAGIISVVALGDDYDLDIGSDQTVITTAKKSYRFDVFIDARGQKPLRNKDIPFPTLRKQLAGTGDDVPDVGEDYTLLAPASLRGRIAFGAIPWLMHDHPFVQGLSECAEIGKAMAKAAGKPASGVRRKLPYMEF
>NZ_CP027604.1|WP_003857662.1|2887546_2888182_+|carbonic-anhydrase
MQHIIEGFLSFQKEIFPQRKELFRSLASSQNPKALFISCSDSRLVPELVTQQEPGQLFVIRNAGNIVPPFGPEPGGVSATIEYAVVALGVTDIVICGHSNCGAMKAIADNADLEPMPAVSHWLRYSDAAKAVVEKKTWDKPIDKVNAMVQENVFAQLSNIKTHPSVAVGLRNNAIRLHGWVYDIESGKILALDKNTKSFVSLSENPEVFFE
>NZ_CP027604.1|WP_039268863.1|2886691_2887474_+|MBL-fold-metallo-hydrolase
MITLCKTCGTAYDEQPKNCPICDDDRQYVPVTGQAWTDFDSLTTTHTNKWQQLEPQLFSIKTVPAFAINQRALLLRTPQGNVLWDCIANLDPATRALVDALGGISAIAISHQHYYTTMQEWAAAFNAPIYLHASDRQWVMRDSPAIRFWEEDALEIMPLVTLLRLGGHFAGGTVLHWQSGDGVLLAGDILQVTPGKDAVSFMWSYPNMLPLPARTVESVIGRLTGKTYQRLYGAFEGQNIPVNADEIVQRSGQKYIACLR
>NZ_CP027604.1|WP_003857665.1|2886425_2886566_-|hypothetical-protein
MEIDLDNLVFNGLDEAEERNAERLDDADKKAQAIVADDDCGDACKI
>NZ_CP027604.1|WP_022650932.1|2884962_2886369_+|DUF1996-domain-containing-protein
MKRTVLTPALSATALLLTMQAAHAGPQAHVVCSYSHTLGDDAIMMFGMPNEAMLHDFFGNVHTDAYSSRESLRTQEKTTCDNKADSSAYWAPSLKLPDGTVVKPAYQKTYYQASNVDAWPLHPFPAGLSLLAGDHHGTAPNPHITFLCANGKGYTTRTGEVCGLRKAKDAVQFNIGIQFPNCWDGVNLKPAHGLANATYDTKGQCPSAFPVKIPTVNMNIAYVLPTISSLDTSKVQLSLDPIMHGSEREERWGSLYTAHADFMNGWTEDAARFMTDLCMNRGMDCGTTVPYGYSKAKANVWLSSMEPALSQPDPQVLLVQDNWKNGGRTKNSETLSLVKFHIPPLPAGQDPALFKYRVRIFGGKVETNGADQIFFYPASNDWDPATVSWHSRPSCNYRSDAVLYLNHSREYRMVDVDKVVRKALAEGKTEISWYIGGDRQGNHYQFETGSSPQSLILMLTGFSKTPEI
>NZ_CP027604.1|WP_039268864.1|2894081_2895455_-|MdtK-family-multidrug-efflux-MATE-transporter
MQKYMIEARQLLALAIPVIVAQVAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRDRVAHQVRQGFWLAGFVSVLIMIVLWNAGYIIRAMHNIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKSGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFGSMLTYIKHARSMRDIRNDTTFSTPDWSMLTRLTQLGLPIALALFFEVTLFAVVALLVSPLGIIDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGFRLGQGSTLDAQTAARTGLGVGVCMAVCTALFTVLLREQIALLYNDNPEVVTLASHLMLLAAIYQISDSIQVIGSGVLRGYKDTRSIFFITFIAYWVLGLPCGYILALTDLVVDRMGPAGFWMGFIIGLTSAAIMMMLRMRFLQRQPSTVILQRAAR
>NZ_CP027604.1|WP_003857643.1|2895680_2896322_+|riboflavin-synthase
MFTGIVQGTAKVVSIDEKPNFRTHVVELPEYMLDGIETGASIAHNGCCLTVTEINGNQISFDLMKETLRITNLGELVVGDIINVERAAKFSDEIGGHLMSGHIMTTAEVAKIVTSENNRQIWFKVQDPSLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLQRTTLGAKKLGQRVNIEIDPQTQAVVDTVERVLAAKEAAIIKTVEEE
>NZ_CP027604.1|WP_003857641.1|2896353_2897502_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWSRIVSELLGRAGITINGSSPSDPQIKHPDFFKRVLQEGSLGLGESYMDGWWECERLDMFFSSVLRAGLEKQLPRHFKDTLRIASARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPLMQYSCGYWKKATTLEEAQQDKLQLICDKLQLQPGMRVLDIGCGWGGLAWFMAKNYGVSVVGVTISAEQQKMAQERCLGLDVDIRLQDYRDLNEQFDRIVSVGMFEHVGPKNYKTYFEVADRNLKPDGIFLLHTIGSKRTDNNVDPWINKYIFPNGCLPSVRQIANASEPHFIVEDWHNFGADYDTTLMAWHERFQAAWPEIADNYSERFKRMFSYYLNACAGAFRARDIQLWQVVFSRGIEHGLRVAR
>NZ_CP027604.1|WP_003857639.1|2897800_2899000_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPRKGFLVWLGGLSVLGFLATDMYLPAFAAMQEDLQTPAAAISASLSLFLAGFAFAQLLWGPLSDRFGRKPVLLLGLAIFAAGCLGMLWVRDAAWLLALRFIQAVGVCAAAVTWQALVTDYYPASRTNRIFATIMPLVGLSPALAPLLGSWILAHFDWQAIFATLFAITLVLMLPAFGLKPAHKKETHPDAKPITFTSLLRSKAYRGNVLIYAACSASFFAWLTGSPFILHDMGYSPAAIGLSYVPQTIAFLVGGYGCRAALQKWEGQQMLPWLLVLYALSVIATWAVGFIPGAGLAEILIPFCVMAIANGAIYPIVVAQALRPFPQATGRAAALQNTLQLGLCFLASLVVSALIATPLLTTTSVMLITVALAGLGYRMQSSALREQNDNAQTETSHA
>NZ_CP027604.1|WP_003857638.1|2899112_2900024_+|LysR-family-transcriptional-regulator
MWSDYSLEVVDAVARNGSFTGAAQELHRVPSAISYTVRQLEAWLAVPLFERRHRDVELTPAGAWFLKEGRSVIKKMQITREQCQQIANGWRGHLAIAVDNIVKPERTRQMIVDFYRHFSDVELRVSQEVFNGVWDALADGRAEMAIGATQAIPVGGRYAFRDMGMLSWTCVVARDHPLAALEGPLSDDTLRNWPSLVLEDTSRSLPKRITWLLDNQRRVVAPDWESSATCLSAGLCVGMVPVHFARPRIDAGEWVALTLENPFPDAACCLTWQQNDVSPAMAWLLDYLGDSETLNREWLREPA
>NZ_CP027604.1|WP_003857634.1|2900041_2901067_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNIEKQRAYLSMMAQKRVDGLLVMCSEYPESVLSMLEEYRHIPMVVMDWGEARADFTDSVIDNAFEGGYMAGRYLVERGHREIGVIPGPLERNTGAGRLAGFMKAMEEALITVPENWIVQGDFEPESGYRAMQQIVSQPHRPTAVFCGGDIMAMGALCAADELGLRVPQDISVIGYDNVRNARFFTPALTTIHQPKDSLGETAFNMLLDRIVNKREQSQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP027604.1|WP_003857632.1|2901364_2901454_+|YnhF-family-membrane-protein
MSTDLKFSLFTTIVVLALIVAGGLTAALH
>NZ_CP027604.1|WP_022650939.1|2901615_2902782_+|MFS-transporter
MKINFPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAIGVMVGAPLMTLLLSHRARRNALIFLMAIFTLGNVFSAISPDYTTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTIANIGGVPAATWLGEAIGWRMSFLATAGLGVVAMVALFFSLPKGSAGERPEVRKELAVLMRPQVLSALLTTVLGAGAVFTLYTYISPVLHDITHATPLFVTAMLVLIGVGFSIGNYLGGKFADRSVSGTLKGFLTLLIVIMVAIPWLARNEVGAAIAMVVWGAATFAVVPPLQMRVMRVAHEAPGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYSFVPVMGAIIAALGLLLVIMSGRKQPQAVCTAE
>NZ_CP027604.1|WP_003857629.1|2902819_2903401_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTDFEGKTLEEIVRSSDGGVFNNAAQVWNHTFYWHCLAPNAGGEPDGELAAAINAAFGSFADFKAKFTDAAVKNFGSGWTWLVKEADGKLAIVSTSNAGTPLTTSATPLMTVDVWEHAYYIDYRNARPNYLEHFWALVNWEFVAKNFAA
>NZ_CP027604.1|WP_022650940.1|2903523_2904282_-|C40-family-peptidase
MARITKISMTLCALLFTTLSFTPAANASEQARHSAVQKTHLAKSTERKKKTTSKTVKKKTTAQTKKTASSKTKTLRSGTHKTTRTTASLVNEKCTVRKGHKTKCAKVTKLADVHKARMQKAQKTAMNKLMGQIGKPYRWGGTSPRTGFDCSGLVYYAYKDLVKFRIPRTANEMYHLRDAAPVNRGELQNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRSGQDIQITSLSEDYWVRHYVGARRVMTPKTIR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027604_2	2.1\|2893841\|38\|NZ_CP027604\|CRISPRCasFinder	2893841-2893878	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947

1. spacer 2.1|2893841|38|NZ_CP027604|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cagacgcaagatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
********..****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

592203 : 615524

Liberibacter_phage(33.33%)

integrase,transposase

attL 598401:598425|attR 615618:615642

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039269125.1\|592203_593760_-\|transposase	transposase	NA	NA	NA	NA
WP_001049180.1\|593800_595249_-	ATP-binding protein	NA	NA	NA	NA
WP_000351437.1\|595248_597372_-\|transposase	transposase	NA	NA	NA	NA
WP_000090707.1\|597358_598201_-\|transposase	transposase	NA	NA	NA	NA
598401:598425	attL	NA	NA	NA	NA
WP_022651989.1\|598423_599677_-	hypothetical protein	NA	NA	NA	NA
WP_022651990.1\|599669_600446_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_022651991.1\|600445_603715_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.7e-59	28.8
WP_022651992.1\|603714_604350_-	hypothetical protein	NA	NA	NA	NA
WP_022651993.1\|604333_605713_-	AAA family ATPase	C7BGE8	Burkholderia_phage	1.7e-08	26.9
WP_022651994.1\|605712_606900_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_022651995.1\|606889_608401_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.1e-88	38.7
WP_022651996.1\|608403_609042_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_022651997.1\|609025_609427_-	hypothetical protein	NA	NA	NA	NA
WP_071993176.1\|609677_611075_-\|transposase	transposase	NA	NA	NA	NA
WP_022652319.1\|611109_612561_-	ATP-binding protein	NA	NA	NA	NA
WP_022652000.1\|612550_614710_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_022652001.1\|614699_615524_-\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
615618:615642	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1850000 : 1857595

Enterobacteria_phage(30.0%)

integrase

attL 1842416:1842430|attR 1868109:1868123

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1842416:1842430	attL	NA	NA	NA	NA
WP_003863199.1\|1850000_1851053_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.6e-118	60.9
WP_003863197.1\|1851358_1852462_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.7e-59	39.9
WP_003863195.1\|1852473_1853727_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.3e-97	46.6
WP_039268727.1\|1853928_1855092_-\|integrase	site-specific integrase	A0A220NQU7	Salmonella_phage	5.0e-219	95.1
WP_003863191.1\|1854968_1855319_-	helix-turn-helix domain-containing protein	Q5G8V4	Enterobacteria_phage	1.5e-57	95.7
WP_003863189.1\|1855321_1855531_-	hypothetical protein	A0A220IH74	Escherichia_phage	2.1e-11	59.3
WP_032628143.1\|1855567_1856116_-	hypothetical protein	E5AGD3	Erwinia_phage	2.3e-20	35.0
WP_003863184.1\|1856124_1856325_-	hypothetical protein	G8C7S1	Escherichia_phage	1.1e-20	71.2
WP_022650432.1\|1856333_1857134_-	hypothetical protein	K7P7Q8	Enterobacteria_phage	6.6e-138	85.0
WP_022650433.1\|1857133_1857595_-	VUT family protein	A0A2H4N7D9	Pectobacterium_phage	4.1e-39	55.7
1868109:1868123	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2336724 : 2367754

Cronobacter_phage(80.0%)

portal,head,terminase,tail,holin,capsid,integrase

attL 2336029:2336043|attR 2345190:2345204

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2336029:2336043	attL	NA	NA	NA	NA
WP_003858450.1\|2336724_2337243_+	outer membrane protein OmpX	K7PJP9	Enterobacteria_phage	3.2e-16	31.4
WP_108082280.1\|2337358_2338942_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_017384915.1\|2339211_2339340_-	manganase accumulation protein MntS	NA	NA	NA	NA
WP_039268748.1\|2339506_2340547_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	4.4e-118	61.4
WP_039268749.1\|2340547_2341126_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.3e-29	40.7
WP_001247709.1\|2341245_2341467_+	hypothetical protein	NA	NA	NA	NA
WP_039268750.1\|2341497_2342001_+	hypothetical protein	F1BUN6	Cronobacter_phage	9.5e-58	70.1
WP_039268751.1\|2342010_2342205_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_013097409.1\|2342194_2342623_+	hypothetical protein	F1BUN5	Cronobacter_phage	5.8e-24	49.2
WP_013097408.1\|2342622_2343024_+	hypothetical protein	F1BUN2	Cronobacter_phage	6.0e-39	54.1
WP_013097407.1\|2343090_2343324_+	DUF2732 family protein	NA	NA	NA	NA
WP_039268752.1\|2343314_2344181_+	DNA adenine methylase	F1BUN1	Cronobacter_phage	5.0e-147	93.6
WP_032657714.1\|2344177_2344390_+	hypothetical protein	NA	NA	NA	NA
WP_039268754.1\|2346547_2346754_+	hypothetical protein	NA	NA	NA	NA
2345190:2345204	attR	NA	NA	NA	NA
WP_039268756.1\|2346727_2347051_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	1.3e-47	88.5
WP_039268757.1\|2347047_2348100_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	1.5e-158	78.3
WP_039268760.1\|2350044_2350842_+\|capsid	phage capsid scaffolding protein	F1BUM4	Cronobacter_phage	8.2e-64	53.1
WP_039268761.1\|2350901_2351924_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.6e-152	79.1
WP_039268762.1\|2351926_2352628_+\|terminase	terminase	F1BUM0	Cronobacter_phage	3.3e-85	66.8
WP_039268763.1\|2352687_2353179_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	1.4e-58	78.0
WP_039268764.1\|2353175_2353682_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	1.1e-64	69.7
WP_058663725.1\|2353678_2354386_+	hypothetical protein	F1BUL6	Cronobacter_phage	2.3e-102	78.2
WP_039268766.1\|2354382_2355510_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	4.3e-175	82.7
WP_013097392.1\|2355506_2355962_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	3.5e-59	72.2
WP_039268767.1\|2355971_2356265_+\|holin	holin	C7BGD7	Burkholderia_phage	6.8e-16	48.4
WP_039268768.1\|2356261_2356603_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	5.4e-49	89.1
WP_039268770.1\|2356602_2356971_+	hypothetical protein	F1BUL2	Cronobacter_phage	3.6e-22	52.4
WP_039268771.1\|2357090_2357351_+	hypothetical protein	A5X9I7	Aeromonas_virus	2.4e-20	59.3
WP_039268772.1\|2357538_2359851_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	3.8e-218	57.5
WP_039268773.1\|2359847_2360177_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	4.6e-37	72.5
WP_039268774.1\|2360173_2361358_+	phage protein	F1BUK6	Cronobacter_phage	2.4e-176	79.0
WP_039268775.1\|2361350_2361938_+	hypothetical protein	F1BUK5	Cronobacter_phage	9.9e-91	80.5
WP_080332504.1\|2361947_2364404_+	hypothetical protein	F1BUK3	Cronobacter_phage	1.2e-169	56.5
WP_039268777.1\|2364405_2364840_+\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	5.2e-20	60.8
WP_039268779.1\|2364829_2365555_+	hypothetical protein	F1BUK1	Cronobacter_phage	1.2e-61	51.0
WP_039268780.1\|2365526_2366075_+	protein phage	F1BUJ9	Cronobacter_phage	4.1e-62	74.0
WP_039268781.1\|2366077_2367754_+	hypothetical protein	F1BUJ7	Cronobacter_phage	1.6e-205	63.5

DBSCAN-SWA_4

2705945 : 2766199

Enterobacterial_phage(26.92%)

portal,protease,head,terminase,tail,holin,tRNA,capsid,integrase

attL 2699623:2699640|attR 2773969:2773986

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2699623:2699640	attL	NA	NA	NA	NA
WP_032628201.1\|2705945_2707058_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_022650804.1\|2707098_2707572_-	NUDIX hydrolase	NA	NA	NA	NA
WP_022650805.1\|2707571_2708234_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_003857898.1\|2708351_2709602_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	7.9e-21	94.4
WP_022650806.1\|2709677_2709923_+	YmjA family protein	NA	NA	NA	NA
WP_022650807.1\|2709927_2711427_-	EAL domain-containing protein	NA	NA	NA	NA
WP_071524166.1\|2711551_2711644_-	stress response membrane protein YncL	NA	NA	NA	NA
WP_003857896.1\|2712015_2712264_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_015570794.1\|2712317_2712392_-	protein YoaJ	NA	NA	NA	NA
WP_015570793.1\|2712392_2712491_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_022650808.1\|2712536_2713565_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	5.0e-13	32.1
WP_022650809.1\|2713876_2714131_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_022650810.1\|2714211_2714517_+	hypothetical protein	NA	NA	NA	NA
WP_003857886.1\|2714517_2714862_-	DUF488 domain-containing protein	NA	NA	NA	NA
WP_022650811.1\|2715012_2715720_+	CTP synthase	NA	NA	NA	NA
WP_022650812.1\|2715751_2716939_-	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_022650813.1\|2717038_2717830_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003857881.1\|2717813_2718260_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_022650814.1\|2718366_2720403_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA
WP_022650815.1\|2720418_2721750_-	hypothetical protein	NA	NA	NA	NA
WP_022650816.1\|2722159_2722660_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_032103854.1\|2722879_2724022_-\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	6.4e-94	49.3
WP_022650818.1\|2723996_2724260_-	hypothetical protein	NA	NA	NA	NA
WP_071882635.1\|2724641_2725418_-	DUF551 domain-containing protein	M9NZE4	Enterobacteria_phage	1.1e-28	43.1
WP_039268806.1\|2725414_2725837_-	HNH endonuclease	C6ZR29	Salmonella_phage	2.5e-67	85.7
WP_039268809.1\|2726173_2726404_-	hypothetical protein	G8C7U9	Escherichia_phage	9.7e-34	97.4
WP_052255153.1\|2726400_2726919_-	hypothetical protein	K7PHA5	Enterobacterial_phage	1.3e-22	52.3
WP_063948321.1\|2726905_2727931_-	hypothetical protein	K7PKM7	Enterobacterial_phage	4.6e-168	90.4
WP_039269162.1\|2727927_2728341_-	hypothetical protein	K7PJS4	Enterobacterial_phage	3.6e-55	86.1
WP_039269163.1\|2728875_2729079_-	hypothetical protein	NA	NA	NA	NA
WP_039269164.1\|2729289_2729949_-	helix-turn-helix domain-containing protein	K7PGR7	Enterobacteria_phage	4.1e-69	62.1
WP_039268812.1\|2730056_2730281_+	helix-turn-helix transcriptional regulator	A0A1P8DTF8	Proteus_phage	5.4e-13	54.5
WP_039268813.1\|2730306_2730777_+	hypothetical protein	K7PJS5	Enterobacterial_phage	6.8e-74	91.7
WP_071882636.1\|2731017_2731224_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	4.5e-14	69.2
WP_039268815.1\|2731186_2732125_+	transcriptional regulator	K7PLZ7	Enterobacterial_phage	6.5e-68	87.1
WP_039268818.1\|2732121_2732616_+	hypothetical protein	NA	NA	NA	NA
WP_039268819.1\|2732615_2733275_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	1.3e-99	78.6
WP_039268820.1\|2733271_2733595_+	LexA family transcriptional regulator	K7PHB4	Enterobacterial_phage	7.2e-43	77.9
WP_039268821.1\|2733591_2733981_+	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	5.1e-67	93.8
WP_039268822.1\|2733977_2734967_+	DUF968 domain-containing protein	K7PJS6	Enterobacterial_phage	4.7e-178	89.4
WP_039268823.1\|2734979_2735558_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	7.3e-46	53.3
WP_039268826.1\|2736137_2737037_+\|protease	serine protease	NA	NA	NA	NA
WP_006809173.1\|2737129_2737534_+	hypothetical protein	NA	NA	NA	NA
WP_000220248.1\|2737530_2737812_+\|holin	phage holin family protein	Q9MBZ4	Enterobacteria_phage	3.0e-05	35.9
WP_039268827.1\|2737808_2738435_+	glycoside hydrolase family 19 protein	K7PJS7	Enterobacterial_phage	9.5e-108	92.3
WP_039268828.1\|2738442_2738718_+	hypothetical protein	G8C7W1	Escherichia_phage	2.4e-15	53.3
WP_052255156.1\|2738668_2738860_+	hypothetical protein	K7PM01	Enterobacterial_phage	1.2e-18	93.3
WP_071882637.1\|2739176_2739752_-	hypothetical protein	NA	NA	NA	NA
WP_039268831.1\|2739937_2741395_+	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	9.8e-273	91.8
WP_039268832.1\|2741413_2741644_+	DUF1327 domain-containing protein	NA	NA	NA	NA
WP_039268833.1\|2741659_2741944_-	hypothetical protein	NA	NA	NA	NA
WP_039268834.1\|2742109_2742700_+	hypothetical protein	K7PGW6	Enterobacterial_phage	1.9e-97	86.2
WP_087713568.1\|2742696_2743041_+	HNH endonuclease	A0A2I6PIG1	Escherichia_phage	6.7e-47	73.0
WP_023315886.1\|2743172_2743637_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	2.2e-48	61.4
WP_023315887.1\|2743590_2745327_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	3.7e-141	45.3
WP_039269165.1\|2745326_2746604_+\|portal	phage portal protein	F1C584	Cronobacter_phage	8.8e-217	86.3
WP_023315889.1\|2746621_2747305_+\|head,protease	HK97 family phage prohead protease	Q9MCV5	Escherichia_phage	8.8e-99	78.4
WP_039268837.1\|2747308_2748469_+\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	1.2e-185	86.0
WP_039269166.1\|2748506_2748827_+	hypothetical protein	K7PKV5	Enterobacterial_phage	1.2e-34	61.3
WP_023315892.1\|2748826_2749168_+\|head	phage head closure protein	A0A1W6JP44	Morganella_phage	2.3e-07	30.1
WP_039268838.1\|2749157_2749535_+	hypothetical protein	Q6UAX2	Klebsiella_phage	1.0e-19	38.7
WP_039268839.1\|2749531_2749936_+	hypothetical protein	Q6UAX1	Klebsiella_phage	1.1e-43	72.0
WP_032104401.1\|2749968_2750421_+\|tail	major tail shaft subunit	Q7Y403	Yersinia_phage	9.1e-60	76.7
WP_039268840.1\|2750484_2750847_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	3.1e-26	54.3
WP_071882647.1\|2750867_2751086_+	hypothetical protein	Q6UAW9	Klebsiella_phage	1.5e-23	66.7
WP_039268841.1\|2751085_2754412_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	69.1
WP_032104406.1\|2754411_2754750_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.9e-46	73.2
WP_039268842.1\|2754746_2755505_+\|tail	phage minor tail protein L	G8C7J7	Escherichia_phage	1.4e-142	94.8
WP_039268843.1\|2755506_2756214_+	peptidase P60	K7PLS6	Enterobacteria_phage	2.7e-143	97.0
WP_039269167.1\|2756246_2756660_+	lipoprotein	G8C7Q7	Escherichia_phage	4.9e-52	65.7
WP_039268844.1\|2756718_2757309_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	3.3e-78	77.6
WP_039268846.1\|2757362_2761199_+\|tail	phage tail protein	K7PJL6	Enterobacteria_phage	0.0e+00	83.4
WP_039268847.1\|2761242_2761557_+	hypothetical protein	A0A2P0WA17	Enterobacter_phage	5.6e-32	63.7
WP_039268849.1\|2761557_2762229_+	hypothetical protein	A0A2P0WA07	Enterobacter_phage	2.6e-87	72.6
WP_039268850.1\|2762336_2762570_+	hypothetical protein	E4WL42	Enterobacteria_phage	8.6e-30	77.6
WP_039268851.1\|2762628_2764011_+	hypothetical protein	K7P6I4	Enterobacteria_phage	1.9e-124	56.8
WP_039268852.1\|2764093_2764333_+	hypothetical protein	K7P7N3	Enterobacteria_phage	3.5e-26	71.8
WP_039268853.1\|2764332_2764653_+	hypothetical protein	K7PGV5	Enterobacterial_phage	2.3e-25	54.7
WP_039268854.1\|2764915_2766199_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	1.4e-09	28.3
2773969:2773986	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3000724 : 3007973

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022651054.1\|3000724_3001402_+	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	1.5e-77	62.6
WP_032609101.1\|3001577_3001889_-	YebG family protein	NA	NA	NA	NA
WP_017384547.1\|3001998_3002613_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	3.3e-28	34.7
WP_022651056.1\|3002657_3003512_-	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	1.2e-23	34.9
WP_003858259.1\|3003513_3004131_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.4e-74	59.1
WP_039268870.1\|3004141_3006580_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.9e-216	49.5
WP_003857424.1\|3006710_3007016_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_003857421.1\|3007118_3007973_-	benzoate transporter	M1I711	Paramecium_bursaria_Chlorella_virus	8.1e-25	33.2

DBSCAN-SWA_6

3329464 : 3405906

Enterobacteria_phage(29.41%)

plate,terminase,tail,holin,tRNA,integrase

attL 3328105:3328120|attR 3353632:3353647

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3328105:3328120	attL	NA	NA	NA	NA
WP_003856933.1\|3329464_3330625_+	porin OmpS2	Q1MVN1	Enterobacteria_phage	2.5e-117	59.3
WP_022651250.1\|3330659_3331082_-	GFA family protein	NA	NA	NA	NA
WP_003856931.1\|3331085_3331283_-	hypothetical protein	NA	NA	NA	NA
WP_071785691.1\|3331703_3331904_+\|integrase	tyrosine-type recombinase/integrase	A0A0U2JGI6	Escherichia_phage	1.1e-20	71.7
WP_022651252.1\|3332228_3332918_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.1e-77	59.0
WP_071787990.1\|3332955_3333168_-	cold shock-like protein CspF	NA	NA	NA	NA
WP_022651253.1\|3333450_3333669_+	cold shock domain-containing protein	A0A1W6JNX5	Morganella_phage	2.9e-19	65.7
WP_032645629.1\|3334230_3334458_+	hypothetical protein	NA	NA	NA	NA
WP_022651254.1\|3334662_3335001_+	hypothetical protein	NA	NA	NA	NA
WP_022651255.1\|3335415_3335982_-	recombinase family protein	A0A1S6L009	Salmonella_phage	6.0e-77	80.0
WP_072031589.1\|3336109_3336847_+	hypothetical protein	K7P6T0	Enterobacteria_phage	5.4e-70	55.7
WP_072202872.1\|3337706_3339017_-\|tail	tail fiber domain-containing protein	K7PGY2	Enterobacteria_phage	1.3e-77	46.2
WP_022651261.1\|3339075_3339309_-	hypothetical protein	E4WL42	Enterobacteria_phage	9.5e-29	76.3
WP_022651262.1\|3339377_3340088_-	hypothetical protein	A0A2P0WA07	Enterobacter_phage	3.6e-87	72.6
WP_022651263.1\|3340088_3340403_-	hypothetical protein	A0A2P0WA17	Enterobacter_phage	6.6e-33	65.7
WP_022651264.1\|3340443_3343995_-\|tail	phage tail protein	K7P840	Enterobacteria_phage	0.0e+00	84.6
WP_022651265.1\|3344047_3344674_-\|tail	tail assembly protein	K7PH91	Enterobacterial_phage	1.8e-53	59.9
WP_123839386.1\|3344785_3345352_-	hypothetical protein	NA	NA	NA	NA
WP_022651267.1\|3345428_3346142_-\|tail	phage tail protein	K7PLS6	Enterobacteria_phage	1.0e-142	97.4
WP_022651268.1\|3346143_3346899_-\|tail	phage minor tail protein L	G8C7J7	Escherichia_phage	2.0e-115	77.2
WP_022651269.1\|3346895_3347243_-\|tail	phage tail protein	I6PBN7	Cronobacter_phage	1.7e-37	62.6
WP_020690998.1\|3347299_3347653_-	hypothetical protein	A0A1V0E5P9	Salmonella_phage	6.0e-59	98.3
WP_022651270.1\|3347727_3350640_-\|tail	phage tail tape measure protein	A0A0K0VLY2	Klebsiella_phage	1.6e-128	34.7
WP_032645632.1\|3350636_3350951_-	hypothetical protein	I6PD79	Cronobacter_phage	1.1e-16	65.0
WP_022651271.1\|3350947_3351259_-	hypothetical protein	I6PDG2	Cronobacter_phage	1.8e-35	68.0
WP_022651272.1\|3351324_3351996_-	hypothetical protein	I6PBN6	Cronobacter_phage	7.4e-50	47.3
WP_022651273.1\|3352065_3352476_-	hypothetical protein	I6PDJ8	Cronobacter_phage	1.9e-32	52.2
WP_022651274.1\|3352472_3353057_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.4e-49	55.3
WP_022651275.1\|3353058_3353409_-	hypothetical protein	I6PD77	Cronobacter_phage	2.1e-32	57.8
WP_022651276.1\|3353410_3353893_-	hypothetical protein	A0A0E3GMJ4	Enterobacteria_phage	2.6e-12	34.7
3353632:3353647	attR	NA	NA	NA	NA
WP_127353320.1\|3353929_3354286_-	hypothetical protein	NA	NA	NA	NA
WP_039268908.1\|3354210_3355164_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	5.3e-134	75.0
WP_022651278.1\|3355176_3355947_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	6.3e-69	59.6
WP_022651279.1\|3356027_3357125_-	hypothetical protein	I6PD76	Cronobacter_phage	1.8e-117	57.9
WP_022651280.1\|3357126_3358515_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	2.1e-123	49.2
WP_022651281.1\|3358516_3359824_-	hypothetical protein	A0A1B1P9C9	Acinetobacter_phage	1.3e-143	57.3
WP_022651282.1\|3359801_3360800_-\|terminase	terminase small subunit	I6X6R5	Burkholderia_virus	1.1e-38	43.4
WP_032645635.1\|3360846_3361296_-	hypothetical protein	NA	NA	NA	NA
WP_032645710.1\|3362804_3363080_-	hypothetical protein	G8C7W1	Escherichia_phage	3.7e-32	84.4
WP_022651285.1\|3363087_3363717_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	2.3e-101	87.1
WP_022651286.1\|3363716_3363998_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.3e-19	46.2
WP_015570936.1\|3363984_3364371_-	hypothetical protein	A0A192Y8P2	Salmonella_phage	3.2e-45	78.1
WP_022651288.1\|3365156_3365348_-	hypothetical protein	NA	NA	NA	NA
WP_022651290.1\|3365873_3366707_-	antitermination protein	K7PKS8	Enterobacteria_phage	3.3e-124	78.7
WP_032645711.1\|3366703_3367066_-	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	5.2e-50	83.1
WP_022651293.1\|3367273_3367876_-	DUF1367 family protein	A0A0M4QX23	Salmonella_phage	6.8e-95	82.5
WP_022651294.1\|3368264_3368489_-	DinI family protein	H6WRY5	Salmonella_phage	1.8e-21	62.3
WP_022651295.1\|3368859_3369306_-	VOC family protein	NA	NA	NA	NA
WP_039268909.1\|3369792_3370974_+	diguanylate phosphodiesterase	NA	NA	NA	NA
WP_014884019.1\|3371319_3371538_-	hypothetical protein	NA	NA	NA	NA
WP_014832179.1\|3371839_3372289_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_039268911.1\|3372565_3373252_-	phage replication protein P	G8C7U6	Escherichia_phage	2.0e-82	63.0
WP_032645637.1\|3373248_3374166_-	hypothetical protein	K7PGZ0	Enterobacteria_phage	4.2e-112	71.1
WP_039268913.1\|3374250_3374802_-	hypothetical protein	K7PJT7	Enterobacteria_phage	7.5e-32	47.3
WP_022651300.1\|3374804_3375032_-	hypothetical protein	A0A0M4QX15	Salmonella_phage	1.6e-20	62.2
WP_022651301.1\|3375131_3375524_+	helix-turn-helix domain-containing protein	K7PM35	Enterobacteria_phage	6.3e-41	63.1
WP_162183705.1\|3375772_3376099_-	hypothetical protein	NA	NA	NA	NA
WP_039268914.1\|3376342_3379480_+	exodeoxyribonuclease	K7P6V4	Enterobacteria_phage	0.0e+00	64.4
WP_022651303.1\|3379489_3380575_+	recombinase RecT	K7PKR8	Enterobacteria_phage	2.8e-123	63.3
WP_020882485.1\|3380613_3380856_+	DUF4060 family protein	K7PHF4	Enterobacteria_phage	1.3e-33	93.6
WP_022651304.1\|3380920_3381133_+	DUF1233 family excisionase	A0A0U2RY08	Escherichia_phage	4.3e-20	63.4
WP_022651305.1\|3381134_3382373_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	4.3e-168	70.0
WP_003856923.1\|3382422_3383358_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.0e-142	95.7
WP_003856922.1\|3383401_3384775_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.1e-50	31.6
WP_163270243.1\|3384832_3384985_-	hypothetical protein	NA	NA	NA	NA
WP_003856916.1\|3385259_3386243_-	zinc transporter ZntB	NA	NA	NA	NA
WP_022651306.1\|3386333_3387464_-	methyl-accepting chemotaxis sensory transducer	A0A2H4J162	uncultured_Caudovirales_phage	2.6e-10	28.6
WP_003856913.1\|3387780_3388269_-	hypothetical protein	NA	NA	NA	NA
WP_022651307.1\|3388297_3389614_-	type VI secretion system protein VasL	NA	NA	NA	NA
WP_022651308.1\|3389637_3390093_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003856903.1\|3391238_3391763_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_123839387.1\|3392326_3392602_-	hypothetical protein	NA	NA	NA	NA
WP_058647470.1\|3392777_3393122_-	hypothetical protein	NA	NA	NA	NA
WP_022651313.1\|3395751_3396759_-	hypothetical protein	NA	NA	NA	NA
WP_039268915.1\|3396748_3399211_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_022651315.1\|3399215_3399740_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_022651316.1\|3399775_3400858_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_022651318.1\|3401190_3401682_-	hypothetical protein	NA	NA	NA	NA
WP_022651321.1\|3404136_3405906_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_7

3686494 : 3738836

Escherichia_phage(23.33%)

integrase,terminase,tail,holin

attL 3688408:3688436|attR 3736623:3736651

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003859884.1\|3686494_3687139_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	3.3e-55	49.8
WP_003859879.1\|3687306_3688287_+	DUF535 domain-containing protein	NA	NA	NA	NA
3688408:3688436	attL	NA	NA	NA	NA
WP_003859877.1\|3688764_3689436_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.1e-80	60.5
WP_032666022.1\|3689502_3689910_-	cell envelope integrity/translocation protein TolA	NA	NA	NA	NA
WP_003859872.1\|3690052_3691321_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	3.4e-229	91.5
WP_003859869.1\|3691320_3691626_-	hypothetical protein	I6PCW5	Cronobacter_phage	7.8e-15	40.6
WP_003859867.1\|3691738_3692101_+	GtrA family protein	U5P0S6	Shigella_phage	4.4e-49	85.0
WP_003859865.1\|3692097_3693027_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	5.7e-157	90.1
WP_039268929.1\|3693019_3694330_+	hypothetical protein	NA	NA	NA	NA
WP_003859861.1\|3695009_3697433_-	SGNH/GDSL hydrolase family protein	G0XNW5	Escherichia_phage	3.5e-142	39.8
WP_039268930.1\|3697488_3699966_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	0.0e+00	92.8
WP_039268931.1\|3699952_3700318_-	C40 family peptidase	F1C5F2	Cronobacter_phage	1.1e-63	93.3
WP_039268932.1\|3700331_3700802_-	hypothetical protein	F1C5F1	Cronobacter_phage	1.1e-79	94.2
WP_039268933.1\|3700801_3701299_-	hypothetical protein	F1C5F0	Cronobacter_phage	5.3e-85	87.9
WP_039268934.1\|3701298_3704202_-\|tail	tail protein (tape measure)	F1C5E9	Cronobacter_phage	1.7e-106	37.3
WP_039268935.1\|3704214_3704886_-	hypothetical protein	G0ZNE7	Cronobacter_phage	7.0e-56	49.8
WP_017693204.1\|3704943_3705687_-	Ig domain-containing protein	F1C5E5	Cronobacter_phage	1.3e-71	85.4
WP_032608745.1\|3705751_3706135_-	hypothetical protein	F1C5E4	Cronobacter_phage	2.3e-40	64.6
WP_039268936.1\|3706131_3706596_-	hypothetical protein	A0A2P1MXA4	Escherichia_phage	2.0e-30	44.8
WP_039268937.1\|3706598_3706949_-	hypothetical protein	G0ZNE2	Cronobacter_phage	2.0e-38	67.0
WP_006820518.1\|3706948_3707122_-	hypothetical protein	Q5G8X7	Enterobacteria_phage	7.8e-12	49.1
WP_001514201.1\|3707121_3707523_-	hypothetical protein	A0A1V0E5R0	Salmonella_phage	7.1e-56	81.5
WP_108082289.1\|3707585_3707879_-	hypothetical protein	A0A1V0E5P8	Salmonella_phage	5.7e-39	85.6
WP_039268939.1\|3707888_3708965_-	hypothetical protein	A0A1V0E5P6	Salmonella_phage	2.3e-178	87.7
WP_023300384.1\|3708982_3709432_-	hypothetical protein	H6WRT3	Salmonella_phage	5.5e-65	85.9
WP_023314024.1\|3709444_3710710_-	hypothetical protein	Q5G8Y2	Enterobacteria_phage	2.1e-215	88.6
WP_039268940.1\|3711598_3712948_-	DUF1073 domain-containing protein	A0A1V0E5Q5	Salmonella_phage	4.1e-233	88.4
WP_022651105.1\|3713017_3713284_-	hypothetical protein	Q5G8Y6	Enterobacteria_phage	3.8e-42	94.3
WP_022651104.1\|3713345_3714830_-	hypothetical protein	G0ZND4	Cronobacter_phage	2.2e-259	88.1
WP_015571553.1\|3714816_3715389_-\|terminase	terminase small subunit	G0ZND3	Cronobacter_phage	6.5e-71	72.1
WP_022651103.1\|3715416_3715752_+	hypothetical protein	NA	NA	NA	NA
WP_022651102.1\|3715811_3716027_-	hypothetical protein	NA	NA	NA	NA
WP_022651101.1\|3716131_3716383_-	hypothetical protein	NA	NA	NA	NA
WP_047724946.1\|3716560_3716758_-	hypothetical protein	K7PM01	Enterobacterial_phage	1.6e-16	90.7
WP_022651100.1\|3716714_3716987_-	hypothetical protein	G8C7W1	Escherichia_phage	3.1e-15	59.1
WP_022651099.1\|3716983_3717526_-	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	2.7e-74	70.4
WP_001514184.1\|3717528_3717804_-\|holin	phage holin family protein	S4TNV9	Salmonella_phage	5.8e-09	41.0
WP_001514183.1\|3717800_3718202_-	hypothetical protein	NA	NA	NA	NA
WP_039268944.1\|3718913_3719603_-	antiterminator	I6PDF8	Cronobacter_phage	5.1e-62	51.5
WP_003859831.1\|3719715_3720357_-	protein ninG	M9NYX8	Enterobacteria_phage	2.6e-76	71.6
WP_003859830.1\|3720349_3720520_-	NinE family protein	G8C7V4	Escherichia_phage	8.2e-22	90.9
WP_003859829.1\|3720516_3720954_-	NinB protein	G8C7V3	Escherichia_phage	2.7e-53	69.0
WP_003859826.1\|3721134_3721368_-	hypothetical protein	NA	NA	NA	NA
WP_003859824.1\|3721376_3721628_-	DNA polymerase III subunit theta	Q71T70	Escherichia_phage	4.3e-27	83.6
WP_003859822.1\|3721937_3722540_-	DUF551 domain-containing protein	G8C7V0	Escherichia_phage	1.8e-31	67.5
WP_003859819.1\|3722536_3723061_-	ead/Ea22-like family protein	A0A0K2FJF6	Enterobacteria_phage	4.8e-36	48.3
WP_003859817.1\|3723057_3723402_-	helix-turn-helix transcriptional regulator	G8C7U7	Escherichia_phage	2.1e-56	96.5
WP_003859816.1\|3723398_3724271_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.8e-103	66.2
WP_003859814.1\|3724255_3725125_-	replication protein	K7PGT1	Enterobacteria_phage	8.4e-62	48.8
WP_003859813.1\|3725210_3725756_-	hypothetical protein	K7P7P2	Enterobacteria_phage	7.3e-80	82.3
WP_003859811.1\|3725785_3726019_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.1e-21	67.6
WP_039269179.1\|3726123_3726828_+	helix-turn-helix transcriptional regulator	A0A2H4FNG6	Salmonella_phage	1.1e-88	66.7
WP_003859807.1\|3726838_3727135_+	hypothetical protein	NA	NA	NA	NA
WP_039269180.1\|3727678_3728116_+	hypothetical protein	K7P7N6	Enterobacteria_phage	3.9e-76	97.2
WP_003859803.1\|3728279_3728489_+	hypothetical protein	NA	NA	NA	NA
WP_003859801.1\|3728490_3728649_+	hypothetical protein	M9NZI5	Enterobacteria_phage	3.2e-20	92.2
WP_001752704.1\|3728645_3728852_+	cell division protein FtsZ	G8C7T2	Escherichia_phage	3.6e-32	100.0
WP_003859795.1\|3728930_3729215_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.9e-47	91.5
WP_003859792.1\|3729233_3730079_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.1e-69	61.2
WP_003859791.1\|3730075_3730756_+	YqaJ viral recombinase family protein	M9NZE1	Enterobacteria_phage	4.5e-127	94.7
WP_003859790.1\|3730752_3731181_+	hypothetical protein	G8C7S8	Escherichia_phage	2.6e-72	97.2
WP_003859789.1\|3731177_3731345_+	hypothetical protein	G8C7S7	Escherichia_phage	3.6e-22	96.2
WP_039268945.1\|3731341_3732094_+	hypothetical protein	M1FN76	Enterobacteria_phage	9.6e-131	86.4
WP_039268946.1\|3732098_3733223_+	site-specific DNA-methyltransferase	A0A060D598	Salmonella_phage	6.8e-88	48.4
WP_039268947.1\|3733219_3733438_+	hypothetical protein	NA	NA	NA	NA
WP_039268948.1\|3733434_3733776_+	DUF551 domain-containing protein	U5P092	Shigella_phage	3.2e-17	51.9
WP_039268949.1\|3733867_3734086_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	2.1e-17	64.8
WP_039268950.1\|3734176_3734446_+	hypothetical protein	NA	NA	NA	NA
WP_039268951.1\|3734534_3735065_+	hypothetical protein	A0A059VFZ8	Pseudomonas_phage	3.0e-30	42.1
WP_039268952.1\|3735221_3735494_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	2.5e-28	63.3
WP_039268953.1\|3735462_3736548_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	9.6e-148	68.4
WP_003859787.1\|3736870_3737209_-	YebY family protein	NA	NA	NA	NA
3736623:3736651	attR	NA	NA	NA	NA
WP_022651438.1\|3737225_3738095_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_022651439.1\|3738096_3738468_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_003859784.1\|3738605_3738836_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	7.0e-16	61.8

DBSCAN-SWA_8

3919341 : 3927087

Bodo_saltans_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003859480.1\|3919341_3919953_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	A0A2H4UVM0	Bodo_saltans_virus	2.1e-14	29.3
WP_003859479.1\|3919991_3920972_-	LPS O-antigen chain length determinant protein WzzB	NA	NA	NA	NA
WP_003859478.1\|3921164_3922169_+	NAD-dependent epimerase	A0A2K9L0I7	Tupanvirus	1.1e-33	29.3
WP_003859477.1\|3922217_3923384_-	UDP-glucose 6-dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	4.1e-112	54.0
WP_003859476.1\|3923623_3924505_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.5e-103	62.4
WP_003859475.1\|3924505_3925591_-	dTDP-glucose 4,6-dehydratase	A0A291LAD7	Escherichia_phage	3.7e-99	52.6
WP_003859473.1\|3925680_3927087_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	3.1e-37	28.3

DBSCAN-SWA_9

4373970 : 4459592

Enterobacteria_phage(19.15%)

portal,plate,protease,terminase,tail,holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003860724.1\|4373970_4374708_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_003860725.1\|4374840_4376169_+	ATP-dependent RNA helicase SrmB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.7e-48	33.5
WP_003860727.1\|4376221_4376605_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	2.1e-33	71.8
WP_003860729.1\|4376920_4377610_+	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	7.9e-55	48.8
WP_022651671.1\|4377649_4378735_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_003860733.1\|4378939_4379359_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-13	37.2
WP_003860734.1\|4379429_4380128_+	DTW domain-containing protein	NA	NA	NA	NA
WP_022651672.1\|4380163_4382827_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_022651673.1\|4382936_4384292_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_003860739.1\|4384338_4384662_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_003860741.1\|4384658_4385966_-	MFS transporter	Q6JIH2	Burkholderia_virus	2.7e-43	29.6
WP_006811623.1\|4386117_4386570_-	DUF4385 domain-containing protein	M4QHR1	Cyanophage	3.9e-34	50.0
WP_022651674.1\|4392224_4394798_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	4.5e-127	35.5
WP_003863167.1\|4394927_4395659_-	polyphenol oxidase	NA	NA	NA	NA
WP_003863165.1\|4395655_4396636_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_039268995.1\|4396767_4397505_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_003863162.1\|4397772_4398114_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100229775.1\|4398219_4398267_+	hypothetical protein	NA	NA	NA	NA
WP_003863160.1\|4398374_4399535_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_003863157.1\|4399531_4400404_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_003863156.1\|4400464_4401586_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_039269031.1\|4401596_4402667_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.5e-89	51.5
WP_003863151.1\|4402879_4403254_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_003863149.1\|4403407_4403944_+	YfiR family protein	NA	NA	NA	NA
WP_003863147.1\|4403936_4405157_+	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	1.2e-05	39.8
WP_003863144.1\|4405169_4405655_+	OmpA family protein	NA	NA	NA	NA
WP_003863143.1\|4405657_4407028_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_003863141.1\|4407066_4407471_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|4407603_4407951_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_003863138.1\|4407994_4408762_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_003863136.1\|4408793_4409333_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003863133.1\|4409348_4409597_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_003863132.1\|4409713_4411075_-	signal recognition particle protein	NA	NA	NA	NA
WP_020883913.1\|4411166_4412033_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_026094274.1\|4412052_4413339_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_003863126.1\|4413391_4413985_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_003863124.1\|4414107_4414986_+	NAD(+) kinase	NA	NA	NA	NA
WP_022651676.1\|4415071_4416733_+	DNA repair protein RecN	NA	NA	NA	NA
WP_071524123.1\|4416707_4416890_+	hypothetical protein	NA	NA	NA	NA
WP_003863121.1\|4416871_4417210_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_003863119.1\|4417271_4417559_-	RnfH family protein	NA	NA	NA	NA
WP_006811645.1\|4417548_4418025_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_003863115.1\|4418142_4418625_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	6.8e-29	46.8
WP_039269032.1\|4419367_4420573_+	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_039269186.1\|4420828_4421500_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	5.1e-83	62.2
WP_039269033.1\|4421509_4421827_-	hypothetical protein	K7PGV5	Enterobacterial_phage	1.9e-24	51.9
WP_012906750.1\|4422337_4422517_+	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	1.3e-17	72.9
WP_032619507.1\|4422538_4422943_+	type II toxin-antitoxin system HicB family antitoxin	Q775F5	Haemophilus_virus	3.1e-35	49.2
WP_039269035.1\|4422983_4424054_-	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_039269037.1\|4424130_4424709_-\|tail	tail fiber assembly protein	E5G6P1	Salmonella_phage	8.9e-52	54.4
WP_052255160.1\|4424708_4426886_-	hypothetical protein	A0A0M3ULF6	Salmonella_phage	1.9e-54	38.7
WP_032619504.1\|4426888_4427440_-\|tail	phage tail protein I	A0A0F7LDF3	Escherichia_phage	4.3e-27	41.0
WP_039269039.1\|4427432_4428347_-\|plate	baseplate assembly protein	V5YTH6	Pseudomonas_phage	6.3e-60	46.0
WP_032619502.1\|4428330_4428684_-\|plate	baseplate assembly protein	E5FFH4	Burkholderia_phage	8.5e-21	50.0
WP_039269041.1\|4428720_4429839_-	late control protein D	R9TNM7	Vibrio_phage	2.7e-36	32.6
WP_032620301.1\|4429841_4430057_-\|tail	tail protein	R9TR63	Vibrio_phage	1.8e-13	52.9
WP_032619500.1\|4430031_4430502_-\|tail	phage tail protein	D4HTW5	Vibrio_phage	3.8e-16	33.8
WP_023299869.1\|4432745_4433033_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_039269044.1\|4433084_4433591_-\|tail	tail protein	NA	NA	NA	NA
WP_039269045.1\|4433587_4435057_-\|tail	tail protein	R9TMQ0	Vibrio_phage	3.2e-77	46.8
WP_039269046.1\|4435095_4435719_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	1.6e-14	38.6
WP_039269047.1\|4435711_4436266_-	hypothetical protein	NA	NA	NA	NA
WP_039269048.1\|4436274_4436937_-	hypothetical protein	R9TR34	Vibrio_phage	2.5e-21	36.7
WP_039269050.1\|4436938_4437295_-	hypothetical protein	NA	NA	NA	NA
WP_039269051.1\|4437294_4437630_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.8e-12	43.6
WP_039269189.1\|4437697_4439776_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	2.7e-199	53.3
WP_032634300.1\|4439765_4441286_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.6e-153	55.4
WP_039269052.1\|4441294_4441510_-	hypothetical protein	NA	NA	NA	NA
WP_039269054.1\|4441506_4443630_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	7.0e-304	74.7
WP_032619489.1\|4443630_4444134_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	5.2e-48	62.3
WP_039269056.1\|4444343_4444859_-	hypothetical protein	K7PHH7	Enterobacteria_phage	3.4e-79	91.2
WP_039269058.1\|4444855_4445392_-	lysozyme	K7PM52	Enterobacteria_phage	4.1e-83	81.1
WP_000286102.1\|4445391_4445607_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.3e-27	80.3
WP_039269059.1\|4446405_4447470_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	5.0e-173	79.9
WP_016240136.1\|4447620_4447812_-	hypothetical protein	Q8SBE3	Shigella_phage	5.1e-20	79.0
WP_039269061.1\|4448010_4448703_-	antitermination protein	NA	NA	NA	NA
WP_039269063.1\|4448724_4449786_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	7.0e-111	55.7
WP_039269064.1\|4449782_4450475_-	antirepressor	G0ZND1	Cronobacter_phage	3.1e-59	55.1
WP_032678776.1\|4450577_4451912_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	9.7e-118	51.3
WP_039269065.1\|4451908_4452763_-	GntR family transcriptional regulator	A0A1C9IHW0	Salmonella_phage	1.1e-58	82.2
WP_020690687.1\|4452752_4452932_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	8.6e-14	69.2
WP_032678779.1\|4453104_4453653_-	hypothetical protein	A0A1C9II13	Salmonella_phage	1.3e-68	68.7
WP_032678781.1\|4453675_4453891_-	cell division protein	NA	NA	NA	NA
WP_032678782.1\|4453989_4454616_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	2.7e-46	48.3
WP_016247397.1\|4455249_4455621_+	hypothetical protein	Q8HAA1	Salmonella_phage	2.2e-56	90.2
WP_039269066.1\|4455674_4456505_+	YfdQ family protein	Q8HAA2	Salmonella_phage	3.9e-117	77.5
WP_039269067.1\|4456640_4457180_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.9e-73	74.3
WP_039269068.1\|4457167_4457365_+	hypothetical protein	NA	NA	NA	NA
WP_039269069.1\|4457361_4457655_+	hypothetical protein	NA	NA	NA	NA
WP_032678787.1\|4457651_4458224_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.3e-92	83.4
WP_039269071.1\|4458425_4459592_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	3.9e-147	67.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP027606

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 63477

Escherichia_phage(22.22%)

integrase,transposase

attL 33454:33513|attR 60555:61337

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004098982.1\|422_1298_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	5.6e-82	56.4
WP_004098977.1\|1922_2549_+	ParA family plasmid-partitioning AAA ATPase	E5FFJ3	Burkholderia_phage	3.8e-16	30.1
WP_006788217.1\|2668_2848_+	hypothetical protein	NA	NA	NA	NA
WP_032667567.1\|3303_4095_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.2e-51	87.8
WP_004098973.1\|4091_4835_-	hypothetical protein	NA	NA	NA	NA
WP_000493378.1\|4885_5236_-	hypothetical protein	NA	NA	NA	NA
WP_032413492.1\|5860_7669_-	ATP-binding protein	NA	NA	NA	NA
WP_058684107.1\|7665_8712_-	hypothetical protein	NA	NA	NA	NA
WP_013023770.1\|10028_11210_+	DUF4268 domain-containing protein	NA	NA	NA	NA
WP_032667578.1\|11705_12083_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	3.2e-58	90.5
WP_032667561.1\|12079_12427_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	1.8e-60	96.5
WP_032667560.1\|12477_14016_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-270	90.8
WP_005012528.1\|14126_15341_+	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_072159712.1\|15374_16778_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.0e-106	51.5
WP_108082295.1\|16956_17653_+\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	1.5e-125	93.5
WP_123615964.1\|17807_18644_+	hypothetical protein	NA	NA	NA	NA
WP_072159722.1\|18842_19811_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	3.1e-182	97.8
WP_001039463.1\|20523_20910_+	hypothetical protein	NA	NA	NA	NA
WP_000861580.1\|20918_21110_+	hypothetical protein	NA	NA	NA	NA
WP_000807690.1\|22122_22878_+	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	4.5e-136	96.0
WP_032419526.1\|23661_23796_-	hypothetical protein	NA	NA	NA	NA
WP_011977766.1\|24408_24744_-	C2H2-type zinc finger protein	NA	NA	NA	NA
WP_001568067.1\|24916_25198_+	hypothetical protein	NA	NA	NA	NA
WP_000176305.1\|25251_25863_+	DUF2913 family protein	NA	NA	NA	NA
WP_011977825.1\|25859_26021_-	hypothetical protein	NA	NA	NA	NA
WP_108082296.1\|26047_27004_-	hypothetical protein	NA	NA	NA	NA
WP_000075580.1\|27088_27244_-	hypothetical protein	NA	NA	NA	NA
WP_001067834.1\|27384_28089_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_000018329.1\|28278_29094_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067834.1\|29244_29949_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_000219391.1\|30070_30976_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000004159.1\|30972_32211_+	MFS transporter	NA	NA	NA	NA
WP_001137892.1\|32210_32795_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|33287_34052_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
33454:33513	attL	NA	NA	NA	NA
WP_000845048.1\|35325_36339_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_010792467.1\|36487_36952_+	aminoglycoside N-acetyltransferase AAC(3)-Ib	NA	NA	NA	NA
WP_015243636.1\|37162_37495_+	quaternary ammonium compound efflux SMR transporter QacF	NA	NA	NA	NA
WP_000679427.1\|37667_38015_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|38008_38848_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_004883563.1\|38975_39248_+	hypothetical protein	NA	NA	NA	NA
WP_000427623.1\|39429_40434_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_000184001.1\|40661_41867_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|41877_42183_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001323888.1\|42226_42394_-	hypothetical protein	A0A1B0V7I9	Salmonella_phage	2.3e-24	98.2
WP_001161490.1\|42382_42943_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
WP_001138014.1\|42946_45913_+\|transposase	Tn3-like element TnAs1 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	100.0
WP_043002023.1\|45982_46411_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	1.3e-20	38.6
WP_000509966.1\|46417_47023_-	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_039272567.1\|49681_52714_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_039272634.1\|52710_53304_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.2e-40	49.7
WP_063840321.1\|54655_55210_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001334766.1\|55340_56171_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_000186237.1\|56308_56941_+	type B-3 chloramphenicol O-acetyltransferase CatB3	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
WP_001749986.1\|57025_57478_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
WP_000679427.1\|57700_58048_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|58041_58881_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376623.1\|59008_59509_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_022650072.1\|60015_60648_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.0e-77	67.2
WP_001493761.1\|61476_62868_-\|transposase	ISKra4-like element ISKpn19 family transposase	NA	NA	NA	NA
60555:61337	attR	NA	NA	NA	NA
WP_001493762.1\|62904_63477_-	recombinase family protein	M9Q1K0	Clostridium_phage	3.4e-19	39.4

DBSCAN-SWA_2

69468 : 74107

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004199214.1\|69468_70494_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|70490_71270_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_047665864.1\|71656_72538_+	carbapenem-hydrolyzing class A beta-lactamase KPC-6	A0A1B0VBP7	Salmonella_phage	2.0e-74	52.5
WP_004152397.1\|72787_74107_-\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2

DBSCAN-SWA_3

77514 : 80413

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001217881.1\|77514_78072_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_000027057.1\|78254_79115_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_000018330.1\|79597_80413_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.3e-161	98.9

DBSCAN-SWA_4

85018 : 86358

Emiliania_huxleyi_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000046891.1\|85018_85354_+	thermonuclease family protein	G8DH70	Emiliania_huxleyi_virus	2.8e-05	35.7
WP_001067834.1\|85653_86358_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027605

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP027604

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP027606

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection