CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP028910	Campylobacter jejuni strain NCTC 12660 chromosome, complete genome	2 crisprs	DEDDh,WYL,cas14j,cas2,cas1,cas9	0	13	2	0

1. NZ_CP028910

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP028910_1

• CRISPR_ID: NZ_CP028910_1
• CRISPR_location: 1381873-1381952
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP028910_1

Consensus_repeat	Method
TCTTTTTGTTCTTTTAAAGCTTC	CRISPRCasFinder

spacers of NZ_CP028910_1

>1.1|1381896|34|NZ_CP028910|CRISPRCasFinder
TTTTTTAGCTTTATACTCAGCCTTACTCATATAA

CRISPR arrays and Neighbor proteins around NZ_CP028910_1

CRISPR arrays

The CRISPR arrays of NZ_CP028910_1

>merge|NZ_CP028910|1|1381873-1381952|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTCTTTTTTAGCTTTATACTCAGCCTTACTCATATAATCTTTTTGTTCTTTTAAAGCATC

>NZ_CP028910|1|1|1381873-1381952|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTC	TTTTTTAGCTTTATACTCAGCCTTACTCATATAA
TCTTTTTGTTCTTTTAAAGCATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP028910.1|WP_002855470.1|1380899_1381445_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl|CDD|223985
NZ_CP028910.1|WP_002825806.1|1384282_1384630_+|holo-ACP-synthase	unknown	unknown	gnl|CDD|223807
NZ_CP028910.1|WP_002864207.1|1391347_1392109_-|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|224134
NZ_CP028910.1|WP_002864209.1|1388779_1390849_-|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|226093
NZ_CP028910.1|WP_002864208.1|1390845_1391358_-|adenylyl-sulfate-kinase	unknown	unknown	gnl|CDD|235498
NZ_CP028910.1|WP_002780453.1|1379841_1380840_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223135
NZ_CP028910.1|WP_002855339.1|1381472_1381799_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|223870
NZ_CP028910.1|WP_002857981.1|1387598_1388783_-|capsule-polysaccharide-modification-protein-KpsS	unknown	unknown	gnl|CDD|226092
NZ_CP028910.1|WP_002855435.1|1373805_1375647_+|ferrous-iron-transport-protein-B	unknown	unknown	gnl|CDD|223447
NZ_CP028910.1|WP_002852383.1|1382254_1383625_-|phosphoglucosamine-mutase-PgmL	unknown	unknown	gnl|CDD|100091
NZ_CP028910.1|WP_002855324.1|1378636_1379839_-|phosphoglycerate-kinase	unknown	unknown	gnl|CDD|234613
NZ_CP028910.1|WP_002855429.1|1383746_1384283_+|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl|CDD|181433
NZ_CP028910.1|WP_002855307.1|1385046_1386408_-|cytochrome-P450	unknown	unknown	gnl|CDD|225035
NZ_CP028910.1|WP_002780456.1|1377140_1377965_-|enoyl-ACP-reductase-FabI	unknown	unknown	gnl|CDD|181416
NZ_CP028910.1|WP_002855407.1|1375643_1377137_-|hydrogenase-small-subunit	unknown	unknown	gnl|CDD|224654
NZ_CP028910.1|WP_002857989.1|1370786_1372154_+|adenylosuccinate-lyase	unknown	unknown	gnl|CDD|176469
NZ_CP028910.1|WP_002855528.1|1377968_1378640_-|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NZ_CP028910.1|WP_019108711.1|1386404_1387526_-|membrane-protein	unknown	unknown	unknown
NZ_CP028910.1|WP_002855518.1|1384630_1385050_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP028910.1|WP_002779147.1|1373584_1373809_+|ferrous-iron-transport-protein-A	unknown	unknown	gnl|CDD|224830

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP028910.1|WP_002855470.1|1380899_1381445_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl|CDD|223985	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].	3.16494e-57
NZ_CP028910.1|WP_002825806.1|1384282_1384630_+|holo-ACP-synthase	gnl|CDD|223807	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism].	3.71491e-40
NZ_CP028910.1|WP_002864207.1|1391347_1392109_-|NTP-transferase-domain-containing-protein	gnl|CDD|224134	COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane].	4.42626e-75
NZ_CP028910.1|WP_002864209.1|1388779_1390849_-|capsular-polysaccharide-biosynthesis-protein	gnl|CDD|226093	COG3563, KpsC, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP028910.1|WP_002864208.1|1390845_1391358_-|adenylyl-sulfate-kinase	gnl|CDD|235498	PRK05541, PRK05541, adenylylsulfate kinase; Provisional.	2.94731e-100
NZ_CP028910.1|WP_002780453.1|1379841_1380840_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	2.96117e-168
NZ_CP028910.1|WP_002855339.1|1381472_1381799_+|ribosome-silencing-factor	gnl|CDD|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	8.97235e-38
NZ_CP028910.1|WP_002857981.1|1387598_1388783_-|capsule-polysaccharide-modification-protein-KpsS	gnl|CDD|226092	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP028910.1|WP_002855435.1|1373805_1375647_+|ferrous-iron-transport-protein-B	gnl|CDD|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP028910.1|WP_002852383.1|1382254_1383625_-|phosphoglucosamine-mutase-PgmL	gnl|CDD|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP028910.1|WP_002855324.1|1378636_1379839_-|phosphoglycerate-kinase	gnl|CDD|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP028910.1|WP_002855429.1|1383746_1384283_+|flagellar-basal-body-associated-protein-FliL	gnl|CDD|181433	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.19231e-91
NZ_CP028910.1|WP_002855307.1|1385046_1386408_-|cytochrome-P450	gnl|CDD|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.74847e-77
NZ_CP028910.1|WP_002780456.1|1377140_1377965_-|enoyl-ACP-reductase-FabI	gnl|CDD|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP028910.1|WP_002855407.1|1375643_1377137_-|hydrogenase-small-subunit	gnl|CDD|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	4.17824e-157
NZ_CP028910.1|WP_002857989.1|1370786_1372154_+|adenylosuccinate-lyase	gnl|CDD|176469	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.	0
NZ_CP028910.1|WP_002855528.1|1377968_1378640_-|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.79646e-86
NZ_CP028910.1|WP_002779147.1|1373584_1373809_+|ferrous-iron-transport-protein-A	gnl|CDD|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.69416e-22

Protein sequences

>NZ_CP028910.1|WP_002855339.1|1381472_1381799_+|ribosome-silencing-factor
MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKGRV
>NZ_CP028910.1|WP_002855470.1|1380899_1381445_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKIALFGGSFDPPHNGHNSVILEALEKLDIDKLIIMPTYINPFKQNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNTNEVCEEIKDEVKKYYEKLQKN
>NZ_CP028910.1|WP_002780453.1|1379841_1380840_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDDERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA
>NZ_CP028910.1|WP_002855324.1|1378636_1379839_-|phosphoglycerate-kinase
MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKENE
>NZ_CP028910.1|WP_002855528.1|1377968_1378640_-|triose-phosphate-isomerase
MIFAANLKCNHTRASFKIYAKILNKTMGVKCDDIIVFPPSIAFLENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGVSAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFIKLIKG
>NZ_CP028910.1|WP_002780456.1|1377140_1377965_-|enoyl-ACP-reductase-FabI
MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG
>NZ_CP028910.1|WP_002855407.1|1375643_1377137_-|hydrogenase-small-subunit
MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLSLGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKGPYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYTFIEQNFDENPMPSKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAEKPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKAFEDNITKISSLKAS
>NZ_CP028910.1|WP_002855435.1|1373805_1375647_+|ferrous-iron-transport-protein-B
MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKTFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKIIILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNALGEFVKNNISNTFIASALADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWYLVWFMVYNKAKMYLKKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKSIEPIFQPLELDWKLSVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIYNPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN
>NZ_CP028910.1|WP_002779147.1|1373584_1373809_+|ferrous-iron-transport-protein-A
MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSLKNATIMVELDTSCVILRSDEAKTIEVNLI
>NZ_CP028910.1|WP_002857989.1|1370786_1372154_+|adenylosuccinate-lyase
MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKAQAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEYVHFRVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQALPITFGHKVAIWLSELDRHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLENLGLEVPNISWQSTRDRFIELGFVLGNINATFNKIAHQLLILSHNEIDEVAEPFGKGQVGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMFLMLSVVLANMKFALSDLEVKKDKMLKNLDTLKGFVLAERVMFALSDHYGKQHAHEIVYENAMLGIEQQKTFKEVLLADTRVSQVLKEKDIDALLDATSYVGYAPKLVDEFLAKIKNSAILK
>NZ_CP028910.1|WP_002852383.1|1382254_1383625_-|phosphoglucosamine-mutase-PgmL
MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILSLYVKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAKPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTYVFCGDELCYLFAKNIPNPRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEIKARLKN
>NZ_CP028910.1|WP_002855429.1|1383746_1384283_+|flagellar-basal-body-associated-protein-FliL
MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDFVVS
>NZ_CP028910.1|WP_002825806.1|1384282_1384630_+|holo-ACP-synthase
MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAGLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSISHDNGFAIAIVAIV
>NZ_CP028910.1|WP_002855518.1|1384630_1385050_-|hypothetical-protein
MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGYLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKITDFFQKDHCKRANKREQPVVDFIISRNLDKQTIGK
>NZ_CP028910.1|WP_002855307.1|1385046_1386408_-|cytochrome-P450
MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVKMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAIIEVDEAMTFITADVIFRTIMSSKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQVLSDIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKKDTQVRDKLIKKDSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKREL
>NZ_CP028910.1|WP_019108711.1|1386404_1387526_-|membrane-protein
MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKADLSKIEKNEQFPFFQISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKFGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLNHFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQEKIKLFANTIVDKLKQNENKQDYELVLVAHSVGTIVCIEVLECILRQNLDLSLLHKLKILTLGECIPLVSYQKKADEFRKKLEFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI
>NZ_CP028910.1|WP_002857981.1|1387598_1388783_-|capsule-polysaccharide-modification-protein-KpsS
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKIDAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK
>NZ_CP028910.1|WP_002864209.1|1388779_1390849_-|capsular-polysaccharide-biosynthesis-protein
MKYYSTSKKLIANARNFYTISLYKKNLKIKKDDLFFGWGRKKSGLKAINLAKKHKAKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDATMPSKLENLLNTYEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDTSLEFGLAKDFKTLDMIKDAIKENSKSKIYIKIHPDVLSSKKQSDLDLNSLPKECILITENFNPIALLEFFDKVYTKTSGMGFEALMQGCECVCYGMPFYAGWGLTKDELECKRRVRKRSLEEVFYAAYMLYAEYFNPYLNQKSNIFDTIQTLAKYKDIEKVNSNKLFMLGFTLWKRHFIKPFFKAKDNEIIFLNSLKSLARYKLKENDKFFIWGKRIDYNALKTTLIKKAQDENLLHFTPKISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKASKLEELLQNEIFDENMLNRAKNIIKILLENRFSKYNGLKHEDLKINAKIGQKIILIPAQVEDDASMILGGFGLSTLDLLKEVRAKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSAIKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRIRKLSLEELVAGALIIYPRYINPKTKTLCEIEVCLDIMLNLQKAYFSKKYIKLAIDFKTFMLRKIRRFYEFLAKK
>NZ_CP028910.1|WP_002864208.1|1390845_1391358_-|adenylyl-sulfate-kinase
MINSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDELREILGHYAYDKQGRIDMALKRAKFAKFLNDQGMIVIVTTISMFNEIYDYNRKQLKNYYEIYIECDMHELMQRDQKGLYTKVLNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEKVEFIIKKLAL
>NZ_CP028910.1|WP_002864207.1|1391347_1392109_-|NTP-transferase-domain-containing-protein
MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSAGINEIAVVGGYLNEVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFMLKCIEEKQDLIISYADIVYFQDCVQKLINAKEELAIVVDKSWCKLWSKRFTNPLEDAETLKMTNGYIIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSFLQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIDK

Crispr_ID: NZ_CP028910_2

• CRISPR_ID: NZ_CP028910_2
• CRISPR_location: 1497581-1498012
• CRISPR_type: orTypeII
• Repeat_type: NA
• Spacer_info: 6 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NZ_CP028910_2

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	PILER-CR

spacers of NZ_CP028910_2

>2.1|1497617|30|NZ_CP028910|CRISPRCasFinder,CRT
TATGGCAGTTTTTAAAAGAGCTTGGCGGTT
>2.2|1497683|30|NZ_CP028910|CRISPRCasFinder,CRT
CTACAAGAATGAGGATGATGATATTTTACA
>2.3|1497749|30|NZ_CP028910|CRISPRCasFinder,CRT
TCCATTCTCATAAAATATTTAGCCATTATT
>2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT
TTTAAATTTCAAAGATGAGAATATAGCTAA
>2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT
TGGAGTTGAAAGAGTTAATAATACAAATAT
>2.6|1497947|30|NZ_CP028910|CRISPRCasFinder,CRT
AGATGCTTTAACAGTATGTTCTTTAGCAGG
>2.7|1497618|30|NZ_CP028910|PILER-CR
TATGGCAGTTTTTAAAAGAGCTTGGCGGTT
>2.8|1497684|30|NZ_CP028910|PILER-CR
CTACAAGAATGAGGATGATGATATTTTACA
>2.9|1497750|30|NZ_CP028910|PILER-CR
TCCATTCTCATAAAATATTTAGCCATTATT
>2.10|1497816|30|NZ_CP028910|PILER-CR
TTTAAATTTCAAAGATGAGAATATAGCTAA
>2.11|1497882|30|NZ_CP028910|PILER-CR
TGGAGTTGAAAGAGTTAATAATACAAATAT
>2.12|1497948|30|NZ_CP028910|PILER-CR
AGATGCTTTAACAGTATGTTCTTTAGCAGG

CRISPR arrays and Neighbor proteins around NZ_CP028910_2

CRISPR arrays

The CRISPR arrays of NZ_CP028910_2

>merge|NZ_CP028910|2|1497581-1498012|CRISPRCasFinder,CRT,PILER-CR
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTATGGCAGTTTTTAAAAGAGCTTGGCGGTTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATCTACAAGAATGAGGATGATGATATTTTACAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTCCATTCTCATAAAATATTTAGCCATTATTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTTTAAATTTCAAAGATGAGAATATAGCTAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTGGAGTTGAAAGAGTTAATAATACAAATATGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAGATGCTTTAACAGTATGTTCTTTAGCAGGGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP028910|2|2|1497581-1498012|CRISPRCasFinder
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATGGCAGTTTTTAAAAGAGCTTGGCGGTT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CTACAAGAATGAGGATGATGATATTTTACA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TCCATTCTCATAAAATATTTAGCCATTATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTTAAATTTCAAAGATGAGAATATAGCTAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TGGAGTTGAAAGAGTTAATAATACAAATAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AGATGCTTTAACAGTATGTTCTTTAGCAGG
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP028910|2|1|1497581-1498012|CRT
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATGGCAGTTTTTAAAAGAGCTTGGCGGTT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CTACAAGAATGAGGATGATGATATTTTACA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TCCATTCTCATAAAATATTTAGCCATTATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTTAAATTTCAAAGATGAGAATATAGCTAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TGGAGTTGAAAGAGTTAATAATACAAATAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AGATGCTTTAACAGTATGTTCTTTAGCAGG
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP028910|2|1|1497582-1498012|PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	ATGGCAGTTTTTAAAAGAGCTTGGCGGTTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATC	TACAAGAATGAGGATGATGATATTTTACAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	CCATTCTCATAAAATATTTAGCCATTATTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	TTAAATTTCAAAGATGAGAATATAGCTAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	GGAGTTGAAAGAGTTAATAATACAAATATG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA	GATGCTTTAACAGTATGTTCTTTAGCAGGG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP028910.1|WP_108592623.1|1502630_1502813_+|hypothetical-protein	unknown	unknown	gnl|CDD|225611
NZ_CP028910.1|WP_002851155.1|1507204_1508242_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NZ_CP028910.1|WP_002860687.1|1504100_1505090_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439
NZ_CP028910.1|WP_002781229.1|1495820_1496267_+|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|223391
NZ_CP028910.1|WP_002780989.1|1498581_1499472_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NZ_CP028910.1|WP_002858431.1|1492783_1493932_-|carboxynorspermidine-decarboxylase	unknown	unknown	gnl|CDD|273414
NZ_CP028910.1|WP_010891941.1|1488796_1491601_-|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl|CDD|239153
NZ_CP028910.1|WP_002780988.1|1498157_1498589_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP028910.1|WP_002851174.1|1487229_1488162_-|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl|CDD|130645
NZ_CP028910.1|WP_002851523.1|1505150_1505756_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NZ_CP028910.1|WP_002851502.1|1491766_1492480_-|hypothetical-protein	unknown	unknown	gnl|CDD|225916
NZ_CP028910.1|WP_002851407.1|1506476_1507208_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	unknown	unknown	gnl|CDD|225539
NZ_CP028910.1|WP_002858205.1|1494055_1495597_+|multicopper-oxidase-CueO	unknown	unknown	gnl|CDD|225043
NZ_CP028910.1|WP_002851546.1|1508306_1508756_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NZ_CP028910.1|WP_002858151.1|1496270_1497461_+|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl|CDD|223380
NZ_CP028910.1|WP_002851173.1|1505752_1506502_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NZ_CP028910.1|WP_002780990.1|1499468_1502423_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226044
NZ_CP028910.1|WP_002851537.1|1491600_1491792_-|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl|CDD|236534
NZ_CP028910.1|WP_002857949.1|1495598_1495820_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|224888
NZ_CP028910.1|WP_002851264.1|1488158_1488800_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319893

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP028910.1|WP_002780989.1|1498581_1499472_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	1.4e-98	324.1	10.2
NZ_CP028910.1|WP_002780990.1|1499468_1502423_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	0	1163.7	72.0
NZ_CP028910.1|WP_002780988.1|1498157_1498589_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	5e-59	192.3	1.5

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP028910.1|WP_108592623.1|1502630_1502813_+|hypothetical-protein	gnl|CDD|225611	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion].	0.000536605
NZ_CP028910.1|WP_002851155.1|1507204_1508242_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.54942e-34
NZ_CP028910.1|WP_002860687.1|1504100_1505090_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP028910.1|WP_002781229.1|1495820_1496267_+|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	1.4187e-43
NZ_CP028910.1|WP_002780989.1|1498581_1499472_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	3.70973e-121
NZ_CP028910.1|WP_002858431.1|1492783_1493932_-|carboxynorspermidine-decarboxylase	gnl|CDD|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP028910.1|WP_010891941.1|1488796_1491601_-|formate-dehydrogenase-subunit-alpha	gnl|CDD|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP028910.1|WP_002780988.1|1498157_1498589_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	6.96465e-59
NZ_CP028910.1|WP_002851174.1|1487229_1488162_-|formate-dehydrogenase-subunit-gamma	gnl|CDD|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.78832e-90
NZ_CP028910.1|WP_002851523.1|1505150_1505756_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	5.24929e-70
NZ_CP028910.1|WP_002851502.1|1491766_1492480_-|hypothetical-protein	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.00059716
NZ_CP028910.1|WP_002851407.1|1506476_1507208_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	gnl|CDD|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	2.12305e-102
NZ_CP028910.1|WP_002858205.1|1494055_1495597_+|multicopper-oxidase-CueO	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	2.73566e-121
NZ_CP028910.1|WP_002851546.1|1508306_1508756_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NZ_CP028910.1|WP_002858151.1|1496270_1497461_+|molybdopterin-molybdotransferase-MoeA	gnl|CDD|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	2.37307e-143
NZ_CP028910.1|WP_002851173.1|1505752_1506502_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.97072e-93
NZ_CP028910.1|WP_002780990.1|1499468_1502423_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP028910.1|WP_002851537.1|1491600_1491792_-|twin-arginine-translocation-signal-domain-containing-protein	gnl|CDD|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NZ_CP028910.1|WP_002857949.1|1495598_1495820_+|MoaD/ThiS-family-protein	gnl|CDD|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	2.76562e-11
NZ_CP028910.1|WP_002851264.1|1488158_1488800_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57

Protein sequences

>NZ_CP028910.1|WP_002858151.1|1496270_1497461_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENIRIENNTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYTREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDIIFMP
>NZ_CP028910.1|WP_002781229.1|1495820_1496267_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGGIEALSFDIYESLLKKWFDEWQKRVDFDGISLLFAHSIGDVAIHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NZ_CP028910.1|WP_002857949.1|1495598_1495820_+|MoaD/ThiS-family-protein
MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFNENTKLKDGDKIALLPPVCGG
>NZ_CP028910.1|WP_002858205.1|1494055_1495597_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEESNTLFLANINLKKEKLELPKNLKIFKPLEEPKEFKEIIMSEDHMQMHGMMGKSENELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRAFRDTINVRPNEELRLKMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_CP028910.1|WP_002858431.1|1492783_1493932_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCEESAGALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLNAKNELQMIREFSYKDYSLRN
>NZ_CP028910.1|WP_002851502.1|1491766_1492480_-|hypothetical-protein
MGALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NZ_CP028910.1|WP_002851537.1|1491600_1491792_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NZ_CP028910.1|WP_010891941.1|1488796_1491601_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAYYIRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTVEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_CP028910.1|WP_002851264.1|1488158_1488800_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_CP028910.1|WP_002851174.1|1487229_1488162_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGEVFGGGVFVRVCKNLHAFATILFIISIIPMFLCWIKRMLPASYDIRWMMIVGGYLSKIKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NZ_CP028910.1|WP_002780988.1|1498157_1498589_-|CRISPR-associated-endonuclease-Cas2
MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQLNKKQEKYHQQNLFEF
>NZ_CP028910.1|WP_002780989.1|1498581_1499472_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFVLKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALISNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_CP028910.1|WP_002780990.1|1499468_1502423_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNNGDEEKSEILKAIKQNEEKLVNYQSVGEYLYKEYFQKFKENSKEFINVRNKKESYERCIAQSFLKDELKLIFQKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLNNLKNTEGILYTKDDLNTLLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGEHNLSQDNLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEAYNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDAELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNQTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNYKDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSAKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPELVYFNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK
>NZ_CP028910.1|WP_108592623.1|1502630_1502813_+|hypothetical-protein
MPIFMICSTLLAVIVVAYYILKKYNPIFVFFLSGIILLIFAFYTTGTPIPKTPSREYTSF
>NZ_CP028910.1|WP_002860687.1|1504100_1505090_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIGDKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NZ_CP028910.1|WP_002851523.1|1505150_1505756_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGNM
>NZ_CP028910.1|WP_002851173.1|1505752_1506502_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFAYKNEELFFEGKVKYCFEANYNFF
>NZ_CP028910.1|WP_002851407.1|1506476_1507208_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase
MKPIIIFFSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_CP028910.1|WP_002851155.1|1507204_1508242_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINIPIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFEVISFDKFSLGF
>NZ_CP028910.1|WP_002851546.1|1508306_1508756_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP028910_2	2.1|1497617|30|NZ_CP028910|CRISPRCasFinder,CRT	1497617-1497646	30	MN530981	Campylobacter phage DA10, complete genome	5259-5288	0	1.0
NZ_CP028910_2	2.2|1497683|30|NZ_CP028910|CRISPRCasFinder,CRT	1497683-1497712	30	MN530981	Campylobacter phage DA10, complete genome	30556-30585	0	1.0
NZ_CP028910_2	2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT	1497815-1497844	30	MN530981	Campylobacter phage DA10, complete genome	24558-24587	0	1.0
NZ_CP028910_2	2.7|1497618|30|NZ_CP028910|PILER-CR	1497618-1497647	30	MN530981	Campylobacter phage DA10, complete genome	5259-5288	0	1.0
NZ_CP028910_2	2.8|1497684|30|NZ_CP028910|PILER-CR	1497684-1497713	30	MN530981	Campylobacter phage DA10, complete genome	30556-30585	0	1.0
NZ_CP028910_2	2.10|1497816|30|NZ_CP028910|PILER-CR	1497816-1497845	30	MN530981	Campylobacter phage DA10, complete genome	24558-24587	0	1.0
NZ_CP028910_2	2.6|1497947|30|NZ_CP028910|CRISPRCasFinder,CRT	1497947-1497976	30	MN530981	Campylobacter phage DA10, complete genome	30207-30236	1	0.967
NZ_CP028910_2	2.12|1497948|30|NZ_CP028910|PILER-CR	1497948-1497977	30	MN530981	Campylobacter phage DA10, complete genome	30207-30236	1	0.967
NZ_CP028910_2	2.2|1497683|30|NZ_CP028910|CRISPRCasFinder,CRT	1497683-1497712	30	KX229736	Campylobacter phage PC5, complete genome	24059-24088	2	0.933
NZ_CP028910_2	2.8|1497684|30|NZ_CP028910|PILER-CR	1497684-1497713	30	KX229736	Campylobacter phage PC5, complete genome	24059-24088	2	0.933
NZ_CP028910_2	2.3|1497749|30|NZ_CP028910|CRISPRCasFinder,CRT	1497749-1497778	30	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	837-866	4	0.867
NZ_CP028910_2	2.9|1497750|30|NZ_CP028910|PILER-CR	1497750-1497779	30	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	837-866	4	0.867
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP033101	Staphylococcus warneri strain SWO plasmid unnamed3, complete sequence	14187-14216	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	15163-15192	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NC_013378	Staphylococcus epidermidis plasmid SAP105B, complete sequence	6931-6960	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NC_018952	Staphylococcus aureus plasmid pWBG747, complete sequence	30985-31014	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NC_005207	Staphylococcus warneri plasmid pPI-1, complete sequence	16068-16097	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP014063	Staphylococcus aureus strain FDAARGOS_159 plasmid unnamed, complete sequence	10893-10922	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NC_013326	Staphylococcus aureus plasmid pWBG746, complete sequence	12130-12159	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP033781	Staphylococcus epidermidis strain FDAARGOS_529 plasmid unnamed1, complete sequence	10910-10939	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP051645	Staphylococcus caprae strain SY333 plasmid pSY333-41, complete sequence	32564-32593	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP053471	Staphylococcus warneri strain WB224 plasmid pWB224_1, complete sequence	16940-16969	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_MN602039	Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence	32768-32797	5	0.833
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP020462	Staphylococcus epidermidis strain 1457 plasmid p1457, complete sequence	14452-14481	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP033101	Staphylococcus warneri strain SWO plasmid unnamed3, complete sequence	14187-14216	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	15163-15192	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NC_013378	Staphylococcus epidermidis plasmid SAP105B, complete sequence	6931-6960	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NC_018952	Staphylococcus aureus plasmid pWBG747, complete sequence	30985-31014	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NC_005207	Staphylococcus warneri plasmid pPI-1, complete sequence	16068-16097	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP014063	Staphylococcus aureus strain FDAARGOS_159 plasmid unnamed, complete sequence	10893-10922	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NC_013326	Staphylococcus aureus plasmid pWBG746, complete sequence	12130-12159	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP033781	Staphylococcus epidermidis strain FDAARGOS_529 plasmid unnamed1, complete sequence	10910-10939	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP051645	Staphylococcus caprae strain SY333 plasmid pSY333-41, complete sequence	32564-32593	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP053471	Staphylococcus warneri strain WB224 plasmid pWB224_1, complete sequence	16940-16969	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_MN602039	Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence	32768-32797	5	0.833
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP020462	Staphylococcus epidermidis strain 1457 plasmid p1457, complete sequence	14452-14481	5	0.833
NZ_CP028910_2	2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT	1497815-1497844	30	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	378633-378662	6	0.8
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	10333-10362	6	0.8
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	45577-45606	6	0.8
NZ_CP028910_2	2.10|1497816|30|NZ_CP028910|PILER-CR	1497816-1497845	30	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	378633-378662	6	0.8
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	10333-10362	6	0.8
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	45577-45606	6	0.8
NZ_CP028910_2	2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT	1497815-1497844	30	AP013610	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C26-MedDCM-OCT-S45-C147, *** SEQUENCING IN PROGRESS ***	7407-7436	7	0.767
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	MK554696	Fusobacterium phage Fnu1, complete genome	17125-17154	7	0.767
NZ_CP028910_2	2.10|1497816|30|NZ_CP028910|PILER-CR	1497816-1497845	30	AP013610	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C26-MedDCM-OCT-S45-C147, *** SEQUENCING IN PROGRESS ***	7407-7436	7	0.767
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	MK554696	Fusobacterium phage Fnu1, complete genome	17125-17154	7	0.767
NZ_CP028910_2	2.1|1497617|30|NZ_CP028910|CRISPRCasFinder,CRT	1497617-1497646	30	MG676225	Aeromonas phage AhSzw-1, complete genome	109812-109841	8	0.733
NZ_CP028910_2	2.3|1497749|30|NZ_CP028910|CRISPRCasFinder,CRT	1497749-1497778	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	562145-562174	8	0.733
NZ_CP028910_2	2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT	1497815-1497844	30	AP013603	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C26-MedDCM-OCT-S23-C93, *** SEQUENCING IN PROGRESS ***	8154-8183	8	0.733
NZ_CP028910_2	2.6|1497947|30|NZ_CP028910|CRISPRCasFinder,CRT	1497947-1497976	30	MH542234	Staphylococcus phage Terranova, complete genome	102573-102602	8	0.733
NZ_CP028910_2	2.7|1497618|30|NZ_CP028910|PILER-CR	1497618-1497647	30	MG676225	Aeromonas phage AhSzw-1, complete genome	109812-109841	8	0.733
NZ_CP028910_2	2.9|1497750|30|NZ_CP028910|PILER-CR	1497750-1497779	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	562145-562174	8	0.733
NZ_CP028910_2	2.10|1497816|30|NZ_CP028910|PILER-CR	1497816-1497845	30	AP013603	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C26-MedDCM-OCT-S23-C93, *** SEQUENCING IN PROGRESS ***	8154-8183	8	0.733
NZ_CP028910_2	2.12|1497948|30|NZ_CP028910|PILER-CR	1497948-1497977	30	MH542234	Staphylococcus phage Terranova, complete genome	102573-102602	8	0.733
NZ_CP028910_2	2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT	1497815-1497844	30	NC_048647	UNVERIFIED: Klebsiella phage KNP2 genomic sequence	65636-65665	9	0.7
NZ_CP028910_2	2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT	1497815-1497844	30	KX452695	UNVERIFIED: Klebsiella phage KPN2 genomic sequence	65636-65665	9	0.7
NZ_CP028910_2	2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT	1497881-1497910	30	MG592587	Vibrio phage 1.216.O._10N.222.55.C12, partial genome	20620-20649	9	0.7
NZ_CP028910_2	2.6|1497947|30|NZ_CP028910|CRISPRCasFinder,CRT	1497947-1497976	30	NC_014389	Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence	340622-340651	9	0.7
NZ_CP028910_2	2.10|1497816|30|NZ_CP028910|PILER-CR	1497816-1497845	30	NC_048647	UNVERIFIED: Klebsiella phage KNP2 genomic sequence	65636-65665	9	0.7
NZ_CP028910_2	2.10|1497816|30|NZ_CP028910|PILER-CR	1497816-1497845	30	KX452695	UNVERIFIED: Klebsiella phage KPN2 genomic sequence	65636-65665	9	0.7
NZ_CP028910_2	2.11|1497882|30|NZ_CP028910|PILER-CR	1497882-1497911	30	MG592587	Vibrio phage 1.216.O._10N.222.55.C12, partial genome	20620-20649	9	0.7
NZ_CP028910_2	2.12|1497948|30|NZ_CP028910|PILER-CR	1497948-1497977	30	NC_014389	Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence	340622-340651	9	0.7
NZ_CP028910_1	1.1|1381896|34|NZ_CP028910|CRISPRCasFinder	1381896-1381929	34	MH752385	Bacillus phage Ray17, complete genome	8509-8542	10	0.706

1. spacer 2.1|1497617|30|NZ_CP028910|CRISPRCasFinder,CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

tatggcagtttttaaaagagcttggcggtt	CRISPR spacer
tatggcagtttttaaaagagcttggcggtt	Protospacer
******************************

2. spacer 2.2|1497683|30|NZ_CP028910|CRISPRCasFinder,CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

ctacaagaatgaggatgatgatattttaca	CRISPR spacer
ctacaagaatgaggatgatgatattttaca	Protospacer
******************************

3. spacer 2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
tttaaatttcaaagatgagaatatagctaa	Protospacer
******************************

4. spacer 2.7|1497618|30|NZ_CP028910|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

tatggcagtttttaaaagagcttggcggtt	CRISPR spacer
tatggcagtttttaaaagagcttggcggtt	Protospacer
******************************

5. spacer 2.8|1497684|30|NZ_CP028910|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

ctacaagaatgaggatgatgatattttaca	CRISPR spacer
ctacaagaatgaggatgatgatattttaca	Protospacer
******************************

6. spacer 2.10|1497816|30|NZ_CP028910|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
tttaaatttcaaagatgagaatatagctaa	Protospacer
******************************

7. spacer 2.6|1497947|30|NZ_CP028910|CRISPRCasFinder,CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

agatgctttaacagtatgttctttagcagg	CRISPR spacer
agatgctttaacagtatgttctttagcggg	Protospacer
***************************.**

8. spacer 2.12|1497948|30|NZ_CP028910|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

agatgctttaacagtatgttctttagcagg	CRISPR spacer
agatgctttaacagtatgttctttagcggg	Protospacer
***************************.**

9. spacer 2.2|1497683|30|NZ_CP028910|CRISPRCasFinder,CRT matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 2, identity: 0.933

ctacaagaatgaggatgatgatattttaca	CRISPR spacer
ctacaagaatgaaaatgatgatattttaca	Protospacer
************..****************

10. spacer 2.8|1497684|30|NZ_CP028910|PILER-CR matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 2, identity: 0.933

ctacaagaatgaggatgatgatattttaca	CRISPR spacer
ctacaagaatgaaaatgatgatattttaca	Protospacer
************..****************

11. spacer 2.3|1497749|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 4, identity: 0.867

tccattc-tcataaaatatttagccattatt	CRISPR spacer
-ctattcatcataaaatttttagccattata	Protospacer
 *.**** ********* ************ 

12. spacer 2.9|1497750|30|NZ_CP028910|PILER-CR matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 4, identity: 0.867

tccattc-tcataaaatatttagccattatt	CRISPR spacer
-ctattcatcataaaatttttagccattata	Protospacer
 *.**** ********* ************ 

13. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP033101 (Staphylococcus warneri strain SWO plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

14. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

15. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NC_013378 (Staphylococcus epidermidis plasmid SAP105B, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

16. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NC_018952 (Staphylococcus aureus plasmid pWBG747, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

17. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NC_005207 (Staphylococcus warneri plasmid pPI-1, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

18. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP014063 (Staphylococcus aureus strain FDAARGOS_159 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

19. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NC_013326 (Staphylococcus aureus plasmid pWBG746, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

20. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP033781 (Staphylococcus epidermidis strain FDAARGOS_529 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

21. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP051645 (Staphylococcus caprae strain SY333 plasmid pSY333-41, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

22. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP053471 (Staphylococcus warneri strain WB224 plasmid pWB224_1, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

23. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_MN602039 (Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

24. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP020462 (Staphylococcus epidermidis strain 1457 plasmid p1457, complete sequence) position: , mismatch: 5, identity: 0.833

tggagtt---gaaagagttaataatacaaatat	CRISPR spacer
---agtttacgaaagatttaatcatacaaatat	Protospacer
   ****   ****** ***** **********

25. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP033101 (Staphylococcus warneri strain SWO plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

26. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

27. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NC_013378 (Staphylococcus epidermidis plasmid SAP105B, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

28. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NC_018952 (Staphylococcus aureus plasmid pWBG747, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

29. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NC_005207 (Staphylococcus warneri plasmid pPI-1, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

30. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP014063 (Staphylococcus aureus strain FDAARGOS_159 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

31. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NC_013326 (Staphylococcus aureus plasmid pWBG746, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

32. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP033781 (Staphylococcus epidermidis strain FDAARGOS_529 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

33. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP051645 (Staphylococcus caprae strain SY333 plasmid pSY333-41, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

34. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP053471 (Staphylococcus warneri strain WB224 plasmid pWB224_1, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

35. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_MN602039 (Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence) position: , mismatch: 5, identity: 0.833

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---agtttatgaaagatttaatcatacaaatat	Protospacer
   ***   ******* ***** **********

36. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP020462 (Staphylococcus epidermidis strain 1457 plasmid p1457, complete sequence) position: , mismatch: 5, identity: 0.833

tggagtt---gaaagagttaataatacaaatat	CRISPR spacer
---agtttacgaaagatttaatcatacaaatat	Protospacer
   ****   ****** ***** **********

37. spacer 2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 6, identity: 0.8

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
taacaattttaaagatgagattatagctta	Protospacer
*   *****.********** ******* *

38. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 6, identity: 0.8

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---aatttatgaaagacttaatcatacaaatat	Protospacer
   *.*   ******* ***** **********

39. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 6, identity: 0.8

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---aatttatgaaagacttaatcatacaaatat	Protospacer
   *.*   ******* ***** **********

40. spacer 2.10|1497816|30|NZ_CP028910|PILER-CR matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 6, identity: 0.8

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
taacaattttaaagatgagattatagctta	Protospacer
*   *****.********** ******* *

41. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 6, identity: 0.8

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---aatttatgaaagacttaatcatacaaatat	Protospacer
   *.*   ******* ***** **********

42. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 6, identity: 0.8

tggagt---tgaaagagttaataatacaaatat	CRISPR spacer
---aatttatgaaagacttaatcatacaaatat	Protospacer
   *.*   ******* ***** **********

43. spacer 2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT matches to AP013610 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C26-MedDCM-OCT-S45-C147, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
tttaaatttcaaagaggagaacaagattca	Protospacer
*************** *****.* ...* *

44. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to MK554696 (Fusobacterium phage Fnu1, complete genome) position: , mismatch: 7, identity: 0.767

tggagttgaaagagttaataatacaaatat	CRISPR spacer
aatagttgaaatagataataatacaaaagt	Protospacer
 . ******** ** ************ .*

45. spacer 2.10|1497816|30|NZ_CP028910|PILER-CR matches to AP013610 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C26-MedDCM-OCT-S45-C147, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
tttaaatttcaaagaggagaacaagattca	Protospacer
*************** *****.* ...* *

46. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to MK554696 (Fusobacterium phage Fnu1, complete genome) position: , mismatch: 7, identity: 0.767

tggagttgaaagagttaataatacaaatat	CRISPR spacer
aatagttgaaatagataataatacaaaagt	Protospacer
 . ******** ** ************ .*

47. spacer 2.1|1497617|30|NZ_CP028910|CRISPRCasFinder,CRT matches to MG676225 (Aeromonas phage AhSzw-1, complete genome) position: , mismatch: 8, identity: 0.733

tatggcagtttttaaaagagcttggcggtt	CRISPR spacer
gctgccagtttttaaaagagctttacaatg	Protospacer
  ** ****************** .*..* 

48. spacer 2.3|1497749|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.733

tccattctcataaaatatttagccattatt	CRISPR spacer
ggaactctcataaaatatttatccaataac	Protospacer
   *.**************** *** ** .

49. spacer 2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT matches to AP013603 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C26-MedDCM-OCT-S23-C93, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
tttaaatttcaaagaggagaacaggattct	Protospacer
*************** *****.* ...*  

50. spacer 2.6|1497947|30|NZ_CP028910|CRISPRCasFinder,CRT matches to MH542234 (Staphylococcus phage Terranova, complete genome) position: , mismatch: 8, identity: 0.733

agatgctttaacagtatgttctttagcagg	CRISPR spacer
tgttgctttaacattatgttctttttttgc	Protospacer
 * ********** **********  . * 

51. spacer 2.7|1497618|30|NZ_CP028910|PILER-CR matches to MG676225 (Aeromonas phage AhSzw-1, complete genome) position: , mismatch: 8, identity: 0.733

tatggcagtttttaaaagagcttggcggtt	CRISPR spacer
gctgccagtttttaaaagagctttacaatg	Protospacer
  ** ****************** .*..* 

52. spacer 2.9|1497750|30|NZ_CP028910|PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.733

tccattctcataaaatatttagccattatt	CRISPR spacer
ggaactctcataaaatatttatccaataac	Protospacer
   *.**************** *** ** .

53. spacer 2.10|1497816|30|NZ_CP028910|PILER-CR matches to AP013603 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C26-MedDCM-OCT-S23-C93, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
tttaaatttcaaagaggagaacaggattct	Protospacer
*************** *****.* ...*  

54. spacer 2.12|1497948|30|NZ_CP028910|PILER-CR matches to MH542234 (Staphylococcus phage Terranova, complete genome) position: , mismatch: 8, identity: 0.733

agatgctttaacagtatgttctttagcagg	CRISPR spacer
tgttgctttaacattatgttctttttttgc	Protospacer
 * ********** **********  . * 

55. spacer 2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NC_048647 (UNVERIFIED: Klebsiella phage KNP2 genomic sequence) position: , mismatch: 9, identity: 0.7

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
cacaaatttcaaagatgaaagtatagtcct	Protospacer
. .***************.*.*****..  

56. spacer 2.4|1497815|30|NZ_CP028910|CRISPRCasFinder,CRT matches to KX452695 (UNVERIFIED: Klebsiella phage KPN2 genomic sequence) position: , mismatch: 9, identity: 0.7

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
cacaaatttcaaagatgaaagtatagtcct	Protospacer
. .***************.*.*****..  

57. spacer 2.5|1497881|30|NZ_CP028910|CRISPRCasFinder,CRT matches to MG592587 (Vibrio phage 1.216.O._10N.222.55.C12, partial genome) position: , mismatch: 9, identity: 0.7

tggagttgaaagagttaataatacaaatat	CRISPR spacer
atatgttgaaagagtcaataataccaagtg	Protospacer
  . ***********.******** **   

58. spacer 2.6|1497947|30|NZ_CP028910|CRISPRCasFinder,CRT matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 9, identity: 0.7

agatgctttaacagtatgttctttagcagg	CRISPR spacer
cagtgctttaacaatatcttctttagttat	Protospacer
 ..**********.*** ********. . 

59. spacer 2.10|1497816|30|NZ_CP028910|PILER-CR matches to NC_048647 (UNVERIFIED: Klebsiella phage KNP2 genomic sequence) position: , mismatch: 9, identity: 0.7

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
cacaaatttcaaagatgaaagtatagtcct	Protospacer
. .***************.*.*****..  

60. spacer 2.10|1497816|30|NZ_CP028910|PILER-CR matches to KX452695 (UNVERIFIED: Klebsiella phage KPN2 genomic sequence) position: , mismatch: 9, identity: 0.7

tttaaatttcaaagatgagaatatagctaa	CRISPR spacer
cacaaatttcaaagatgaaagtatagtcct	Protospacer
. .***************.*.*****..  

61. spacer 2.11|1497882|30|NZ_CP028910|PILER-CR matches to MG592587 (Vibrio phage 1.216.O._10N.222.55.C12, partial genome) position: , mismatch: 9, identity: 0.7

tggagttgaaagagttaataatacaaatat	CRISPR spacer
atatgttgaaagagtcaataataccaagtg	Protospacer
  . ***********.******** **   

62. spacer 2.12|1497948|30|NZ_CP028910|PILER-CR matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 9, identity: 0.7

agatgctttaacagtatgttctttagcagg	CRISPR spacer
cagtgctttaacaatatcttctttagttat	Protospacer
 ..**********.*** ********. . 

63. spacer 1.1|1381896|34|NZ_CP028910|CRISPRCasFinder matches to MH752385 (Bacillus phage Ray17, complete genome) position: , mismatch: 10, identity: 0.706

ttttttagctttatactcagccttactcatataa	CRISPR spacer
cttacaagctttatactcagccttattgatcgtt	Protospacer
.** . *******************.* **    

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	896366 : 910222	13	Campylobacter_phage(81.82%)	NA	NA
DBSCAN-SWA_2	1400532 : 1407168	8	Tupanvirus(16.67%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP028910|896366:910222|DBSCAN-SWA
AATGAATATAAGAGAATTTTTATTAGAAAAACCACAAGAAAATAACATTATTTCATTTTTGCAAGATGGAGCAAGTCAAAGTGAAAATCAAAATACAAGTGAATATTTATCAAATTTAAAAAATGAAGTAATAAATGATTTTTATAAAAATAAAGATAAATATGCTAAAGAATATGAAAAATATAATTTCAAAGACCAAAATTTAACAAATCATATGGGAAATATTAGTGAATATAAAAGGGATTTATATGATTATAATAAAAATCCATCCATGAATGCTGATGATTTAAGTAATTATATTTTAGATAAGCAATCTAAATTTAATGCCTCTAAACCTATTTTTACTGATGATAATGAAGTAGCAAGAAAAAGTAATCAGTTTATGAGAGATTTAGGCGATGAGTTGCAAAAATCAGGGCGTGGAAGATTATTACAAGATGATGATGGATCTTATTGGGTGCAAGATAATAACGGAAATTATTCTAAAGTGCAAGGTAGCACAATGGGTGATTTATATCGTGGATTAAGAGATAATGGTGCTAGTATGGCTTTAGGAACAGCAGGTGCCATTGGCGGTACAATGCTAGGTGGCGGAGTTGGTATGGTTGCAGGTGGTGCATTAGGTGCATCTTTAGGGGCAGGATATGATTACTACGGAAATACAAAAGATACAAATCAAGATATGAATTTAAAAGAGGCCATTATGCTTATGGGCGAAAATGCAGGACTTTCTTTAATAGGAGATGCGGCTTTTGCAGGAGTTGCCAAAGGAGCAAGAGCTTTAAAAAATACCTATAATATGGCAAAAACAGGTGCACAAGCTGGTAAAGATATGATAGATGGCATGGCTGTAAAAGGTGGTAATTTAGGTAATAGGGTTATAGATAAAATAAGTAAAACAGATATACCTGTGGTGGGTAAATTTACAGATGGTGGTTTGCAAAATGCAGAAACAATTTTTAATAATCTTACAAAAAATGTAGAGAATAAAAAACAAATAGATGAACTTATAGCAAAAGAAAATCCAACATACCTAGAAAATGGAAAACCTACAATAGAAATATTAAAAAACATTGTAGAGCAAGGACTTAATAAAAATAATCCACAATTTATACAAGATAGCGCTAAAAGGACAAGTGCTATTTTAAAAAATATTTCTAATAGTTTACAAGGAGTTCCTACTACACAAAGAAGAGAAGTATTATTAAAAGCAGCACAAGCTTATCCAGAAATAGGAAGTTTTTTAGATGATGTTTTAAAGGCTGATAAGGATGCTAGTATTTCTTTTTTAAATATGATTAAAGGACAAGATGAAGTATTTAAAAACAAAACAGGTTTAAATGGTGAGTTTGATTATAAGGCTTGGCAAAAAGATAATCACGCTTATGAGAATAGAATAAACCAAGAGTATGGCAGTGCTATAAGTAAATTAGATCAGCTTAATAATGGAAACATAGTATTAACTAGTGAAGATTTAGCAAAGCTTGAAAATTTTAAAAATAATAATTTTTTAGAGCAAGATGTAAAAAATAACATACAAAGCTATTTAGATGAAATAAAAGGAAAAGAAGTAAGTGCGGAGCAAATCTTTGGATTAAGAACAGCTATAAATAAGCAATTAAACACAGGAAATAAAACATATAATACAAAACAAGCTTATGGAATAGTAAAAGAAATTTTAGATGATGCGTTGATAAGAAATGCTAGCAATAAGGTATTAGCAAAAGAAATACTAGATAATGCAAATAAAAATTTTGCTTTAAAGGAAAATTTTAAAGAAAGTTATTTAGGCATGATGAAACCTCAAGAAACAAAAGAAGGGCTGACCGATAGATTGGTTAAAGGGCTTAGAAATATAAATGAAGATAAGAATTTAGAAAATGCTTTTAAAGGAATGAATGAACAAGAAAGATTAGCTAATGAAACTCATGTGATGAATTCTTTATTAGAAAAACATAGGATCGAAGGTGTGGGGTATGATTTTAAATCCTTAGCAAAAGATTTAGAAGATGTCAATTTTTCAAGCAAAAAAATAAAAGATGCTAAAGATGTTATTAATACATACGCTTTGATATATAACAATAATAGAGATTTGATAATGACAGCTTTAGCCAGTAGTGGTAAAAAGACAAACTCTTCAATAGCTACAACAATACATGGTGTTTTTGATAGAATATTAATAAGTGGTATTTTTGCTAGATTACACGCTTTAGCTCCTTTTATGAAAAGTGCAAAAGAACAAGCATTAAGAAATCAAATACTAGATGCTATAAAACTTGCTAAAACCAATAAAGAAGTTATATCTAATCTTAAAAACATAAAAATAGCAGATCAAGAACAAAGTAGAATTTTTAAAGATGCTTTGGATAATTATATTAAAGTAGATAAAGAACAAAATAAAATATTAAAAGATGCACTAATAAAAGAAGGTGTTATCAAAGGCGACAACTTCTTCATGGATAAGGCTGATCCTAAAGATAATTCTTTAAGATTTATAGGCAAAAATGACAAAGAGTATACTATAAATAAAGATGTTAGAAATGAATGGATGAAAACTTTCAATCTTAAAAATATCGACGATGAATATATCCCTAATATACCAAAAGAAGCAAAGATAGCTTTAAAAGATAGAGAAATAAAACTTACAAAAGGAAGTTTACTAAAGCTGATCGAAAAAGATAGAATTAAATACATACCACATATCAAAGAAACTTTAGAAAGCCCACAGGCAATCTTAAAAGATAAAGATGATTTTATTTTTATTAAAAATATAGATAATCAAACTTATTTTACAAGTATAGGCAAAGACTATGAAACGCACTTGACTATAATTAGCAATTCACCAAAGAAACAAAATAATATAAGAAATAAAATTAAGAATGCTGAGGTAGTGTATTATAATAATGCGAGAGCCTTACCGACATCTAGGGCATCTTCAGAGACAAATCAAGTGTCGTTCTCTGATAAACATTCTACCCAAGCTAAACATAAAGAAAGCTTAGAAAAATACAATAGAAATTTTTATTTAAAACATTATAAAGACTTTATAGATAAAAGCGAGAATAAAAAGATTTTTTTTAAATATAATTTTGGAGATTTTCTAGACATAAAAAAACTAGAAAAAAGTCTTGAAAAATATAAAGAAAGCAAACCTCAAGAAATCAAGTATAAAGAGTTAAAAAGAGGTTATATTTTAGATGATTTACTTAATGTAGATGAAGATGTAAGTTATGCGGTTGTCAATAAAGACGATTTAAAACCTTCTTTGACAAGAAGTTTATCGCAATTTAGAAATAAACATTCTAATTCCACAATTAGCGATATAAGAAATTCTTTTAATGAAAGGGAGCATTTTAAAGAAAGTTCAAATTTTGATGGAATACCAACCATAACTAAGGACGGACTTGTTATTGCTGGAAATCATAGAACCACCGCTATAAGAGATTTAAAAGGAGAAAACTTAGCAAGATATATCAAACAAGCTAAAAGGGTTTATGGAGAAGATGTATTTAAAGGTTTTGATGAAAATAAAGCTATGATAGTAAGAATTTTAGATAAAAATGATGATGATACAATTATAAGACTTTCAAAACTTTCAAATGATGGTAGATTGAGCGATGAGAGTGAAAAGCTTCAAGCTTTAGGAGCTAAATATAAAGAAAAACTTTTAAAAATAGAAAATTCAAAAATTAATACAGAAAAAGAACTAATGAATTTTTTAGGTTCAAGAGATATTTTAGAAAGTAAAAGAGCTTTGTTAGATCATTTAATGCCTAATATTAATGACGCTTTACTCTCGTGGGAAAGAAGAAGTGGGGGAGATACTGAATTTAGTAAAATACTTAATGATAATGCCTTAAATTTATTACATTTAAAACAAGCTCTTAATAAAAATAAAGTATTCAAAGATAATGGAAATAACTTTTTTTCTCTTTTTAAAAGAGCTATTGAAAGCATAAACCAAAGTAATGTTTATAAAAATAATAATGAGCTCTATGATATTATTAAAAAATATACAGAACCAAGTTTAAATTTTGAAAAAGAATTTATATCAAGCAATAAAGATTTACAAGCTGATATTTTAGGTTTTATTATTAAATACAATGACACTCTTACAAATCCTAGCGAAGCTTTTGGTAATAAGATTAAAAAAGCTATAGAATTTATTTATGATAATGATAGTTTTTCTTTGTTTAATAATATAAAACTAAGTAATTATGATGTTTTAAATCAAATGCTTAATATAAACATTACAAATAGTATAAAATATCAAGAACTTTTAAATAAAGCAATTGATAATTTGTCTGATGAAAAAAATATAATAAAAAAGTTAAATGAGAATATTAAAAATAAAAAAAGCGTAAAACAAAGACTTGATGAAAAAATACAAGATGATAAAAAAGCTAGAGAAGATATTCTAAAAAGATATGATAATTTTCTAAAAGAAAATAAAGACAATAAACTTGATTTTTTAGATAAGATGAATTTAAATACTATTGAATACAACCTAACTAGACAGATGATAGTCAATGCTAAAGAAAGCACAAATAAAGGGGTAAAAAAAGATATTCCAAGTGATTTAAGGGGTAAAATAGAAAAAGAATTAAACATACAACCTTTAAAAGAATTTGGCGAAAATTATACAGAATATTATCACGATGGAAAAGGTGCTTTACAAAAACTACTCATTGAAAAACAAGGACAGGTAGCAGGTGCTTTTCATAGAAAAGATTTAGGGGATATTGATTTGGTTTGGGGAGAGGTAACAGATAAGATAAAACATAAAGGTTATGGTTTAGCTCATATTATCGATAAGCATCCTGAGTTGGACTTGAAATTAATTAGCGATATTGTCGATAAGGGGAAATTAAATAACCAAAACAACATAAGATATAGAATAGAATATAAAAATTATATTATAGGTTTAAGCAGTGAATATAAAGGAAATAAAAGAACTTTTATAATTACAGCTTTTGAAAGATACAAAGGATAAAAACAACACTTTCACCGATTGTTTTTTTGCGGTTAGCTCGGACAATTTACTAACCAACCTTTTATCAATTATAGCATAAATTCATGTAATTATTTTTTAAAATATAAAAGATAATTGGAAGGGAGATAATAGGATTGTGACTGCATATGAAAAGATTTAAGAGAAAAAGCCAGAAGGTAGTTCTCTCTTGCTTTTACAAAGGTCGAGATCCTACCCTTAAGTTCTTAATCAAAATTCTAATAAACAAAACTAAAAACAAAAATAAATTAGTTTTAATTTATCTTGTTTTTAAAAATATCTAATTTATTTCAAAACACACTATATTTGAAATAGTCATTTTTGGAAAAATCCTTAAAACTAAACTAAGGAGAATTCAAAAATGGCTTTACCTTCAATGGGACATACCTCACCCGCAACAGAAAATGTTAAGTTAAAACAATCAATATATGAAACGATTATTAAAATTGGAGCTACTGAAACACCAATTTTAAATAAAATAGGTACTTCAAAGGTTACAAATCCTTTAACTCATAGTTGGATTACTGATACTTTTGAAGAACCAAAAAAGAATGCAAATTTAGAGTTAAGTAAATTTGTAGGTGAAACAAAAAACACAGCCCAAAAAACTACAAATGCTATTCAAATATTCATTACTGAAGCCATGGTATCAAAAGCTTTATTAAAAGCAAATCAATATGGTGGAAATGAAATGGAGTATCAAATAGGCAAAAAAACCAAAGAACATAAAATGGATATGGAATATGCTTTATTTGGTCTAGGCAGAGATAGTGATGTAAAAAAATCAGTTTTCAAAGATTATGTTCAAGCACAAGAAGCAATAAGTGGAGAAATGGCTGGACTTTTTCATTATATCGCTAAAGGAAAAGATAGCTTTTCTGATGGAAAGCGTGGAAATGTATTAGCTTTTGATGAAACAGGAGATTGGAGTGGAACTGCAACAGAACTAACAGAAGATAAACTTAATCAAATTTTGCAAACCATTTGGAATAGCGGAGTGACGCCTAAAGATGTCTTTTTAGGAGCTGACTTAAAAGGAGCTATCAATAAATTCGCTACAAGAATTTTAGGCAATGAAACAAAACTAGCAGGACAAGTAGTGAGCCTTGAAACAGATTTTGGAACGGTAAATTTCCATATGCATAGATTATTAAGCCCTAAATATGGTTTGGGTGATGTTTTAATTGCTGGGGATTTTGAGTATATGAAACATGGGCTTTATATTCCTACTATGATTGAAGATGTTTCAACTGATATTACTGCAAAAGCAAAAAGATTTTATACGCAAAGCACTTTAGAAGTAAGAAATGCTGATGCTTTTGCTATAGGCGTGGGATTAACTAGTGGAAATAATGCAAAGGCTAAAGCGGTTTTAAAAGCAGCAAAAGGTGCATAATGCTTTGTGCTACGGCTAAAAAACTCATTATCGCTAAAGTTAAAAATTCTTACAAAATGATAGAAGATGATGAAGTTTTGAAAGCCTATTTTATGGAAGCATTTTATTATATTTTATCAAAATGTGTTCCTAGCGTTCTTTTAAAAAATGTAGAGCAAGGCGAAAAAGTTTTTAGGCAAGTTAGAAATAATCATTTTTTGATTATTCCTGATGAGCCTGATTTTGACAATGAAAAAGAACATTTAATGATAGATGAAACACTTAGTTTTGCTGTGATTAATTATGTTTGTTATTTGATTACAAGATGCGAAGAAAAAGACTTTCTGGCATTATGTGACAAGATAATTTATGAGTATATAGCTAATGATGGCAAGGAGCTTGATGATGAAAGAACATGGTTGTAATTGTAATTTCACAAAAAAATTTAATAGAGCTTTGAGTTATAAAGACTATGTGCAAAGTATAAATAGTGCTGATTTTATAGCTTATTTAGATGATAAAAAATGGCTTTTAGCCATGGATGATCTGCTTTTCTTTTGTGAAAAGAGAATTAAAGATAGTGATTATTATGAAGGTTAAAAATGGGAACAAGCTTAAATGAATTAAAAACAGGTAGAGAAAAACTTGAAATCATAAATCAAGTTTTAGCTAGAATAAACAGCATTTCAGAAGCAATAGACAATACAAGACTTGATGAAGTTGTAGGCTTAAAACAAGCTTGCGAATCTTTAAAAAATGAATGTTTAAAATTTAAAAATGATATTGTAGATAAAAATGATGATATTTTAAGCAAATATGATGATATTAATAAAAAATATTCAAATATAAGTGAAAAATACAACAATGTAAATGCAAAATTTGATTATATTAAAGAAGCGTATGAAGATTTTTCTTTAAATAAACAAGAAATACAAAACATTAAAGATTTTTTAGAAAATAATACAGAAGAGTTTGAGAATTTAAAAAAAGATATACAGAAATATGAAGAAATAAAATTTAATTTAGATAATTATATTAATGAAATTAAACAAAATAAAGATTTTGTAAAAGAATATTTTGATTTGAACACAAAAATTAAAGATGAAATTTTAAGTGAACTTAATCATGCTTTAGAAATTGTAGATAGCTTACATTTAAATGTTGATGAATTAAAAGAAATAAAACCTGAATTAATAAGTATTAAAAAAGAAGTAAAAGATTTATCAAATGAAGCAAAATTAGTAGTAAGTGAAGCAAGCGAAATTATAAAAAATAAAATTAACACTATATTCTTTGAAAACCAAAGATTAAATCAAGAAATGATAGATAGTGTTAAAAAGCTAGAAGAAATTAAAATTGATATTGGAGTTAAATATAAAGAAATAGCTAGTGCATATGAACTACTTTTAGAAAGCAAGCAAAATATAGAAGATTTAAGAGAAGTTATAGCTTTATATAAAGAATTTGAAAATGATATAACATCTTATTCCCAAATTATAAAAGATTTTAAAAGTAAAATAGAAAATTTAGAACGAGATTTAAAATCACAGTCTGAAAGTATCTACTCTTCTTTAAATGATAAACAAAATGAAATATTAAAAAATTTAAATGAAGTAAAAAATGAAGCTTTAGTTAAATTTGATGAACTTACAGCAAAATGTGAAGGGTATAAAATACATTTTGAGCAAAGTTATGATAGGTTTAATCAAAGAGCTTTGATAGCTAATGAAGATTTAGGTAGGTTAGCTGAAGTTGCTAAAAAAGAACTAGGTAATGATAAGTTAATTTATGAAACAGAATTAAAAGTTTTAGCTGAAGAAACAATAAAACAAATGGAAGAAATGCTCAAAGGTTTAAGTGATGAAAGAAATGAAGTCACAGAGGTTTTTGAAACTCAAAAGAAAGAATTTACTACTCTTGTAGATACTTCTAAAGTTATGATTGACAACTTAAATCATATTTTTAATGCGAATTATCAAGCAAAGAAAAATGAGTTTAGTATTATTTTTAATGAAAAATTGCATAGTTTAAACGAGAATAAGCAAGATTTTTTAAATGAGCTTGTGAGCGCAAAAGAAAACGGACTCAATAAAATAAATGAAACAAAAGAGCAAAGCCTTAATGAAATAATCCAAACAAAAGAACAAGGACTTAATGAGCTTGAAACTAAAAAAGGTGAGTGCATAGATGAGATTGACAATCAAGCAAGAATCTATGATATAAGTGGTGTTAAGGCTAATGTTGAATATCTTCTTTCTTTGCTTAATGAGAAAGATGATGGTAAAGATGATGGAATTAAAGATGAAATTGCAAATATAGAGCAAGGTATAAAAGATAAAGAACAAGAGCTTGAAGAGATAAAAAAGCAAATTGAAGAAGCTTTAAATAATAATGATGAATTAAAGCAAAAAAATGAGGAATTAAAGGAAATTAAAAATCAAATCGATGAGGCTTTAAGTCAAGAACCACCTGCTGATACAAGCGAACTTGAAGAGAGAAAAGAAGAACTTGAAAATCAAATTGCTGAGCTTGAAAAAGAGATTGCTGGTGAATTAATTAACAAAAAAGAGGAAATTGAAAAAGAACTTGAAGAAGCTAATCAAAACTTAGAGGACAAAAACAATGAGTTAGAGCAAAATGAAAAAGATAAAAAGCTAATTACACAAAAAGTATTAGATATAACTATTAAAACTTTAGAAGCACTTATAGATACAAAAGTAAGTTTAAATGGCGATGAAGAGATAAATGGAAATAAAACTTTTGCTAATCCTATTTTAGTAAAAGTAGATCCAACTAATGATAACCATTTAACAAATAAAATCTATGTAGATACCGCTTTAAATACAAAAGCAAATTTAAATGGAGATAATATATTTAATGGCACAAATATTTTTAATAAGGCATTAACTTCTCCAATCGATCCAACAAATGATAATCACTTAACTAGAAAATGGTATGTAGATTATGGTGGTGGAATTAAAAATCTTGGCACAACTGGCAGTATAAATCTAGATTTAAGACAAGCTCAACATTTTATTTTAACAGCAAATGCAGGAACAAGCATAGGAATAGCTAATTTTGGAGGAGTAGGAAAAAGCGGAACAATAACCATAAATAATTGTCAAAATGTAGTAGCTTTTAATGCCCCTTTTAAATTTAGAATAGCTCAAAGTGGATTTAGTAGCACTGAAACTTTTGCTTATTTTTGCATAGCTTCGAATAATGTAAGATTAGTAAGGACTTAAAATGAATTGTCTCCTTCTTTCTAATAATGGTATAGCACTAAATTTACCTCCATCTTTAGGAGGCTCGGTTGCAAATTATAATTATATGTTAAAGCTAGACATGATTTATAAACAAGCAGTGGTATTGCCATCAAATATTAATAATAAAGAAGTGGTTATGTTAGGCGAAGTTTGGACGACTGGAAATATGTCTAATAAAACTTCTGGAAATACTTTAGAAATAACTTGGAATAATTTTAATTCAAAAGTAACACTACATGCTTTAAGTAAATATTACACTGCCAATGCAAAAATCAAAGTAGAGAAAAAATTCAATTTTGGAAATATAAATAACTTACAAATAATACTAAGTTCTTGGCAAAGCGGTAGTGCAAATGCAAGTGCTGGTTGGAACTTAAATGATGGGGATAGATTAAACCCAAGAGCAAATTTAACATTATACTGGAATTAAGAAAGGGTAAATATGTTTTATGATTTAAAAAATAAAAGTTTAAAATATGATGATATTTTTTTAAAAGATGTAAAAATACAAAACGAAGAAGGTGAAATTGATGCACAAGATACTTATTTTTTAAGTGCTTGCGATGATAAGCTTTTAAAAGAGCTTGGTTTTGCTAAAGTTAAAGAAGAAGAAATCCCAAGTTTTAATGAAAAAATTGAAGAACTTCGCCAAATTCAAACTTATGATGAAGAAAATAATCTTTATATTATTTCTTATGAGATTAAAGAAAAAGCATTAGAAGAGTTAAAAGAATTAAAATTAGAAGAACTAAAAGCTATAAAAGAAGAAAAGCTTTTGTTTATGCCTTTTAAAAATACTATATTTCAAATTGACACGGAAGCAAAAATTAATATTAGCGGAAAAGTTAGCGAGATAATGTTAGCAAATCTCAATAATACTCCTTTGGAAAATATTGCTTGGATTGATAAAGATAATAAAATCACTACATTTAACAAAGAAGAATTTTTAGAATTTGGGGTTGGTATCGCTAAATATACTGAAAGTATTATTTTTAAAAATGATGAACTAAGAAATAAAGTGAAAAATGCCACATCTTTAGAAGAATTAAATTTAATTGCATGGGAGAGTGAAAAATGAGTACTGAAAATATAATAAAAGAAGGTGCTATACTCGGTTCTTTAAGCGGATCAGCATTATTAGGATTGATGGTTTTTGTCTTAGCTGGGATTGCATGGCATTTATATAAAACTTTACATAAAGAAGCTGGGGAAAGAACAAAAGAACTTATAAGTGAAACCAAAAATACTAATGTTCTTATTAGAGAACAAATTGCAGTATCCAGAGCAAGTAGCGATAGTTTGGTTAAATTTATAGAAACACATTGCTCAAAAACCAATGACAAGCTAGAAGCTATAGAAACAGATCTTATGAGAATGGATGAAAGGCTTGTTAAGCTTACTCAAATAAGAAATGATGAATTAAGAAGTATTTTTAAAAAAAAGGAAAACAATGACTAAAACAGAATTAAAAAGGGTTTGTGTAAAACCTTATGATAAAGATAGATTTGAAGTGATACAAGATTATGAGTTTATTTTACCAAACTACAAAGGAGTTGTACCACAAGGCTTTAAAACAGATGGTGCAAGTATCCCACGCCTTTTTTGGTCTTTGTTTCCACCTTTTAAAAGTGAGTATTTTAGTGCTTGTGTAGTGCATGATTTTTTATGTGAAAAAGCAAAATCAAGAAAAGATTACAAACTTGCTGATCTTGTTTTAAAAGAAGCAATGCAAGCTTTAGAAATAAATAAATTTAAGATTTTTGTTTTTTATTGCTCTTGTAATTTATTTCATCAGATCAAATGTTTAATAAAGGGGATAAGATGAGTTTAGAACAGGTTATAAATACTCAAAATGAAAGTTTAAATCAAATTATAAGTAGTTTACAAGAATTAGTTTTAAGTTATAAAAATGGTAATTTGAGTTTAGAAGATGTTAAAAAATTAATTAACGAAACTATTGAAAATATATCAAATGATTATATAAAAGAAAGCGAGCTAAAAGAAAAACTAGAAGCTTTGCTAGAAGAGCTTGGCATCAATGCAAATATCAATAAAGAGAGTTTAAAAGAAGTTGTATTAAAAGTTGTTTTAGAAAATCAAGAAAGTTTAAAAGGTGATAAAGGAGATCCTTTTACTTATGAAGATTTTACAGAAGAACAGCTTGAAAATTTAAAAGGGCAAGATGGAGCTAAAGGAGCTGATGGTAAAAGTGCTTATGAACTTTGGCTTGAAAATGAAGAAAACACTGGAAAAAGTCAAGATGAATTTTTAGAAAGTTTAAAGGCTCAAACACCAACAAAAGAAGAAATTAAACCTATTATAGAAGAGACGCTCGAAGATATGAAATTAAATTTAGGCATTAATGGAATAAAAGTATCTAATTCTATTCCCACTCCAAAAACAAAAGCTAATGTTAATGATTTAATTATAACTTATAATGAAAATGTAAAACAACTTTGGCTTTGTGTGGCAAGTGATGATAAATACACAAGTTGGATTAATTTGCTTGGAAATGAAAATATTACAGCACAAGAGTTGATTATTATTAGTTTTGATACAAATTTAAATAGTGGTCAATATGGCGGATGTTTAAGTGATTTGCGTTTTGGTTTTGAAAATTCTTTAGCAAGCACTACGCAAATTATAAAAGGACTTAATGAAGGCAGTTTTTTAATCACTAAAGATGGAATGGGTTTAAAATCTAAAAATTATACTGAAGTTAGCGTTCTTTCAAAACCAAGTAAAAATCAAATAGAAGGAAATATCAAAACGAGCGGAATTTATAATGATCCTGCTTGGCATAATATTACCAATGCTTTAAAAAAATATGATGGCAATGCAAATGAATGCTGTCTTTGGGCTTCTAATATAAAAAATAGTGTAAGTATAGAGCTTTTTACAAATGAAATTCCTATGAGTCTTTTTTATAGGCAAGCTGGATATTATGGAAATGTCAATCTTTCAAATATAAAAATGCAAAAAGCCCTTAGAGTTCAAAATGAAATTATAGTCGAGAGAAGCTTTATAGGAATAAAAAAAGAAATTGATAAAACTACCTATGGTGATAATGCTTTTTTATTTGAATTTGAAGAAGAAAAATGAGTTTAAATCTAAAAATAAAATACAAAAAATAAAAAGAAAGGAATTATAATGAAAGTAACAATTAATAGAAGATATACTGGTAAAACTTGCGTTATTGGCAAATTTAAGGTTTTAGATGATGAAGAAAAAATTCTTTTTGAATGTTTTTCTTTGGAAGAAGACAAAGAAGGTTTAGAAAGTGGCAAAGATTTAAGAATACCTGAAGGAAATTATAATTTAAAAAGACATAGTCCTTCACGATTTGAAAATACTTTAAGAAGTATTACAAAAAAAGATGATACAATGATAAATGTTTATAATGATGAAGTTCCTTCAAGTCGTGCAATTTTAATACACTGGGGAAACACTGACAAAGACACACAAGGTTGTATCTTGCTGGGGCTTACTAAAGATAATAATAATGAAAGTGTCGGTCAAAGCAGACAAGCTTGTAAAGAATTTTATGATTTGGTGTATGGTAAAAATCTTGAAGACATTAAATTAGAAATAACAAATGAGTTAGCATGAAAGGAGATAAAGTTTAAGTAGGTTAAAGTTTACACCCCACACTTAAACTTCTAAACAAAATATGATAAATCTTTTATTTGGAAATGCAAAGCTTTATATAGCCTTAGCTTTAATGGCAATCTTAACAGGATATTTTTATCTAAGACTTGATAGCACAAAGGCCAAATTAGAAAAAAGTCAAAGTGATTTAGCTTTGGCTTTAAAAGTCAATGAAAATAATCAAGAAAAATTAAAAGAATTAAATCAAATTCATAAAACAGAATTAAAGGCTTTAAATGAAGCAAACAATCAAAAAAATCAAGTACAAGAAAGGGTGCAATATGTTAAAGAATATATTTATAAAAGCAATGAAAATAATATTACCAAGCTTTTTAACGATGTCGTTGATAGGTTGTGGGATGCAAACTCAACAAGTAGTAACCAAAATAGAAATTCAAAAAGTAAGAATTCCGCAAGAACTACTAACATTAAGTCCTCTTGAAAAGCCAAAGGCAAAAAATGAACTAGATATTTTAAATGCTTATTCTATGCTTTTTTACAAATACAAACAGTGTGAAATTCAGATAAGCAAAATAAAGGAGCTAAATAATGAGTAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP028910|896366:910222|907838_909119_+|WP_002874386.1|DBSCAN-SWA
MSLEQVINTQNESLNQIISSLQELVLSYKNGNLSLEDVKKLINETIENISNDYIKESELKEKLEALLEELGINANINKESLKEVVLKVVLENQESLKGDKGDPFTYEDFTEEQLENLKGQDGAKGADGKSAYELWLENEENTGKSQDEFLESLKAQTPTKEEIKPIIEETLEDMKLNLGINGIKVSNSIPTPKTKANVNDLIITYNENVKQLWLCVASDDKYTSWINLLGNENITAQELIIISFDTNLNSGQYGGCLSDLRFGFENSLASTTQIIKGLNEGSFLITKDGMGLKSKNYTEVSVLSKPSKNQIEGNIKTSGIYNDPAWHNITNALKKYDGNANECCLWASNIKNSVSIELFTNEIPMSLFYRQAGYYGNVNLSNIKMQKALRVQNEIIVERSFIGIKKEIDKTTYGDNAFLFEFEEEK
>NZ_CP028910|896366:910222|896366_901358_+|WP_052787798.1|DBSCAN-SWA
MNIREFLLEKPQENNIISFLQDGASQSENQNTSEYLSNLKNEVINDFYKNKDKYAKEYEKYNFKDQNLTNHMGNISEYKRDLYDYNKNPSMNADDLSNYILDKQSKFNASKPIFTDDNEVARKSNQFMRDLGDELQKSGRGRLLQDDDGSYWVQDNNGNYSKVQGSTMGDLYRGLRDNGASMALGTAGAIGGTMLGGGVGMVAGGALGASLGAGYDYYGNTKDTNQDMNLKEAIMLMGENAGLSLIGDAAFAGVAKGARALKNTYNMAKTGAQAGKDMIDGMAVKGGNLGNRVIDKISKTDIPVVGKFTDGGLQNAETIFNNLTKNVENKKQIDELIAKENPTYLENGKPTIEILKNIVEQGLNKNNPQFIQDSAKRTSAILKNISNSLQGVPTTQRREVLLKAAQAYPEIGSFLDDVLKADKDASISFLNMIKGQDEVFKNKTGLNGEFDYKAWQKDNHAYENRINQEYGSAISKLDQLNNGNIVLTSEDLAKLENFKNNNFLEQDVKNNIQSYLDEIKGKEVSAEQIFGLRTAINKQLNTGNKTYNTKQAYGIVKEILDDALIRNASNKVLAKEILDNANKNFALKENFKESYLGMMKPQETKEGLTDRLVKGLRNINEDKNLENAFKGMNEQERLANETHVMNSLLEKHRIEGVGYDFKSLAKDLEDVNFSSKKIKDAKDVINTYALIYNNNRDLIMTALASSGKKTNSSIATTIHGVFDRILISGIFARLHALAPFMKSAKEQALRNQILDAIKLAKTNKEVISNLKNIKIADQEQSRIFKDALDNYIKVDKEQNKILKDALIKEGVIKGDNFFMDKADPKDNSLRFIGKNDKEYTINKDVRNEWMKTFNLKNIDDEYIPNIPKEAKIALKDREIKLTKGSLLKLIEKDRIKYIPHIKETLESPQAILKDKDDFIFIKNIDNQTYFTSIGKDYETHLTIISNSPKKQNNIRNKIKNAEVVYYNNARALPTSRASSETNQVSFSDKHSTQAKHKESLEKYNRNFYLKHYKDFIDKSENKKIFFKYNFGDFLDIKKLEKSLEKYKESKPQEIKYKELKRGYILDDLLNVDEDVSYAVVNKDDLKPSLTRSLSQFRNKHSNSTISDIRNSFNEREHFKESSNFDGIPTITKDGLVIAGNHRTTAIRDLKGENLARYIKQAKRVYGEDVFKGFDENKAMIVRILDKNDDDTIIRLSKLSNDGRLSDESEKLQALGAKYKEKLLKIENSKINTEKELMNFLGSRDILESKRALLDHLMPNINDALLSWERRSGGDTEFSKILNDNALNLLHLKQALNKNKVFKDNGNNFFSLFKRAIESINQSNVYKNNNELYDIIKKYTEPSLNFEKEFISSNKDLQADILGFIIKYNDTLTNPSEAFGNKIKKAIEFIYDNDSFSLFNNIKLSNYDVLNQMLNINITNSIKYQELLNKAIDNLSDEKNIIKKLNENIKNKKSVKQRLDEKIQDDKKAREDILKRYDNFLKENKDNKLDFLDKMNLNTIEYNLTRQMIVNAKESTNKGVKKDIPSDLRGKIEKELNIQPLKEFGENYTEYYHDGKGALQKLLIEKQGQVAGAFHRKDLGDIDLVWGEVTDKIKHKGYGLAHIIDKHPELDLKLISDIVDKGKLNNQNNIRYRIEYKNYIIGLSSEYKGNKRTFIITAFERYKG
>NZ_CP028910|896366:910222|910024_910222_+|WP_002796174.1|DBSCAN-SWA
MQTQQVVTKIEIQKVRIPQELLTLSPLEKPKAKNELDILNAYSMLFYKYKQCEIQISKIKELNNE
>NZ_CP028910|896366:910222|903353_905996_+|WP_002896802.1|DBSCAN-SWA
MGTSLNELKTGREKLEIINQVLARINSISEAIDNTRLDEVVGLKQACESLKNECLKFKNDIVDKNDDILSKYDDINKKYSNISEKYNNVNAKFDYIKEAYEDFSLNKQEIQNIKDFLENNTEEFENLKKDIQKYEEIKFNLDNYINEIKQNKDFVKEYFDLNTKIKDEILSELNHALEIVDSLHLNVDELKEIKPELISIKKEVKDLSNEAKLVVSEASEIIKNKINTIFFENQRLNQEMIDSVKKLEEIKIDIGVKYKEIASAYELLLESKQNIEDLREVIALYKEFENDITSYSQIIKDFKSKIENLERDLKSQSESIYSSLNDKQNEILKNLNEVKNEALVKFDELTAKCEGYKIHFEQSYDRFNQRALIANEDLGRLAEVAKKELGNDKLIYETELKVLAEETIKQMEEMLKGLSDERNEVTEVFETQKKEFTTLVDTSKVMIDNLNHIFNANYQAKKNEFSIIFNEKLHSLNENKQDFLNELVSAKENGLNKINETKEQSLNEIIQTKEQGLNELETKKGECIDEIDNQARIYDISGVKANVEYLLSLLNEKDDGKDDGIKDEIANIEQGIKDKEQELEEIKKQIEEALNNNDELKQKNEELKEIKNQIDEALSQEPPADTSELEERKEELENQIAELEKEIAGELINKKEEIEKELEEANQNLEDKNNELEQNEKDKKLITQKVLDITIKTLEALIDTKVSLNGDEEINGNKTFANPILVKVDPTNDNHLTNKIYVDTALNTKANLNGDNIFNGTNIFNKALTSPIDPTNDNHLTRKWYVDYGGGIKNLGTTGSINLDLRQAQHFILTANAGTSIGIANFGGVGKSGTITINNCQNVVAFNAPFKFRIAQSGFSSTETFAYFCIASNNVRLVRT
>NZ_CP028910|896366:910222|906459_907095_+|WP_002873428.1|DBSCAN-SWA
MFYDLKNKSLKYDDIFLKDVKIQNEEGEIDAQDTYFLSACDDKLLKELGFAKVKEEEIPSFNEKIEELRQIQTYDEENNLYIISYEIKEKALEELKELKLEELKAIKEEKLLFMPFKNTIFQIDTEAKINISGKVSEIMLANLNNTPLENIAWIDKDNKITTFNKEEFLEFGVGIAKYTESIIFKNDELRNKVKNATSLEELNLIAWESEK
>NZ_CP028910|896366:910222|907091_907475_+|WP_002869963.1|DBSCAN-SWA
MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEAGERTKELISETKNTNVLIREQIAVSRASSDSLVKFIETHCSKTNDKLEAIETDLMRMDERLVKLTQIRNDELRSIFKKKENND
>NZ_CP028910|896366:910222|909687_910107_+|WP_002897527.1|DBSCAN-SWA
MINLLFGNAKLYIALALMAILTGYFYLRLDSTKAKLEKSQSDLALALKVNENNQEKLKELNQIHKTELKALNEANNQKNQVQERVQYVKEYIYKSNENNITKLFNDVVDRLWDANSTSSNQNRNSKSKNSARTTNIKSS
>NZ_CP028910|896366:910222|902771_903176_+|WP_002861675.1|DBSCAN-SWA
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYIANDGKELDDERTWL
>NZ_CP028910|896366:910222|901737_902772_+|WP_002896800.1|DBSCAN-SWA
MALPSMGHTSPATENVKLKQSIYETIIKIGATETPILNKIGTSKVTNPLTHSWITDTFEEPKKNANLELSKFVGETKNTAQKTTNAIQIFITEAMVSKALLKANQYGGNEMEYQIGKKTKEHKMDMEYALFGLGRDSDVKKSVFKDYVQAQEAISGEMAGLFHYIAKGKDSFSDGKRGNVLAFDETGDWSGTATELTEDKLNQILQTIWNSGVTPKDVFLGADLKGAINKFATRILGNETKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGDFEYMKHGLYIPTMIEDVSTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKAKAVLKAAKGA
>NZ_CP028910|896366:910222|903156_903351_+|WP_002799287.1|DBSCAN-SWA
MKEHGCNCNFTKKFNRALSYKDYVQSINSADFIAYLDDKKWLLAMDDLLFFCEKRIKDSDYYEG
>NZ_CP028910|896366:910222|905997_906447_+|WP_002896804.1|DBSCAN-SWA
MNCLLLSNNGIALNLPPSLGGSVANYNYMLKLDMIYKQAVVLPSNINNKEVVMLGEVWTTGNMSNKTSGNTLEITWNNFNSKVTLHALSKYYTANAKIKVEKKFNFGNINNLQIILSSWQSGSANASAGWNLNDGDRLNPRANLTLYWN
>NZ_CP028910|896366:910222|907467_907842_+|WP_021358083.1|DBSCAN-SWA
MTKTELKRVCVKPYDKDRFEVIQDYEFILPNYKGVVPQGFKTDGASIPRLFWSLFPPFKSEYFSACVVHDFLCEKAKSRKDYKLADLVLKEAMQALEINKFKIFVFYCSCNLFHQIKCLIKGIR
>NZ_CP028910|896366:910222|909167_909626_+|WP_002858146.1|DBSCAN-SWA
MKVTINRRYTGKTCVIGKFKVLDDEEKILFECFSLEEDKEGLESGKDLRIPEGNYNLKRHSPSRFENTLRSITKKDDTMINVYNDEVPSSRAILIHWGNTDKDTQGCILLGLTKDNNNESVGQSRQACKEFYDLVYGKNLEDIKLEITNELA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052787798.1|896366_901358_+	hypothetical protein	A0A1S5RG98	Helicobacter_phage	8.1e-24	22.4
WP_002896800.1|901737_902772_+	DUF5309 family protein	A0A2I7SBK1	Pseudomonas_phage	1.5e-17	30.5
WP_002861675.1|902771_903176_+	hypothetical protein	NA	NA	NA	NA
WP_002799287.1|903156_903351_+	hypothetical protein	NA	NA	NA	NA
WP_002896802.1|903353_905996_+	hypothetical protein	X2KLU0	Campylobacter_phage	2.8e-44	66.2
WP_002896804.1|905997_906447_+	hypothetical protein	X2KXK7	Campylobacter_phage	1.9e-78	98.0
WP_002873428.1|906459_907095_+	DUF4376 domain-containing protein	X2KRD7	Campylobacter_phage	6.5e-96	99.1
WP_002869963.1|907091_907475_+	hypothetical protein	X2KXD5	Campylobacter_phage	2.4e-61	100.0
WP_021358083.1|907467_907842_+	DUF1353 domain-containing protein	X2KPN9	Campylobacter_phage	4.4e-68	99.2
WP_002874386.1|907838_909119_+	hypothetical protein	X2KRN1	Campylobacter_phage	3.2e-211	92.1
WP_002858146.1|909167_909626_+	hypothetical protein	X2KQY5	Campylobacter_phage	2.0e-83	100.0
WP_002897527.1|909687_910107_+	hypothetical protein	X2KX19	Campylobacter_phage	4.1e-54	97.1
WP_002796174.1|910024_910222_+	hypothetical protein	X2KPN2	Campylobacter_phage	3.2e-25	95.4

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP028910|1400532:1407168|DBSCAN-SWA
TTCAATTATTGATTAGAAAATGATAATAATCCTCAGGCACACCAATATCTATAAAATAATCATCAAAAATACAAGCCCTAGCCTTTAGTTTTTTATAATTTTCTTGTAAAAACTCTTCAAAAGAAAATTTTTCCTGCAAAGCAAAATCATTAAAAATATCTTTAGTTAAAAGATAAATTCCACCATTGATTAAACCTTGCTTTTTAAATACCTTTTCCTCAAAAGAAATTACAAGATCTTGTTCATCAACATTTACTGTGCCGTATCTATCAAAATCATTCATTTGTTTTAAAGCAAGACAAATTTTACTTTCATTTAGCTTTAATTTACTTAAATCTATGTCAAAAAAAGTATCACCATTTAAAACATAAGCTTCATTTTTTACAAATTTCAAAGTCTCTTTTATGGCTCCGCCTGTTCCTAGAGGCTCTTTTTCGATGCTGTATTTTATTTTTATACCTAAAAACTCATCTTTAAAATACTCTTTTATCACTTCATATTTGTATGATACTGCTAAAATTACTTCTTTTATACCTTGCTTTTTAAGATACTCAAAAATAAATTCTAAAAAAGGCTTATCATTTATCGGTGCCATAGGCTTTGGAATGTCTTTTATAATACTTTTAAGTCTTGTTCCTAAGCCGCCACAAAGTATTATTGCTTGCAAGAAAAACCTTTACCAAAAAGCTCTTCTTCGACAATAGCACAAATAATATGTCCTATTAAAATATGCGCTTCTTGAATTCTTGGCGTGCAAGTTGAAGGCACTTTTATACAATAATCACAAAGTTCATTCATAGCCCCGCCACTAGCTCCACTTAAGCCTATACTTATGATTTCTTTTTGTTTGCAAAACTCTAAAGCTTTTAAGATATTTTTACTATTTCCACTTGTTGAAATGCCTATAAAAACATCTCCCTTAACACCTTGAGCTTGCACTTGTCTAGCAAACAAATTTTCATAACCATAGTCATTACCAATAGCTGTTAATATGCTAGTATCTGTAGTAAGTGCAATACTTGCGATACCGGGTCTATCAAAATAAAACCTACTTACAAATTCCCCTGCAATATGCTGTGCATCTGCAGCACTGCCACCATTTCCTGCTAATAAAGTTTTGTTACCATTTTTATAAGCTTTTATGACTTCTAATGAAGCATTTTTAATAAGAGTTATCAAATTCTCATCTTTTAAAATTTGTTCTTTTACTAAAATAGAATCTGCAAAATGTCCTTTTATATAGGAATTTAAATTCTCCATGATTTAACCCCCTCTTTTGTAAATGAAAAATCTTGCACATAACCTTGCTCTTTTCTTAAAGCTTTGATTAAGTTGTATTTTTTAGTAGGATCTACGAAGAAAAACATAAATCCACCAGCTCCTGCTCCGCTGGTTTTGCCACTATAGGCTCCGTTATCTATAGCAAGTTTATAAATTCTTTCAAGCTCATCATTACTAACGATTTCTGAAATGATTTTTTTTGACCGCCAAGATTTTCCTAAAATTTGCGCCAAAGTACCAAAATCGGCTCTAAATAAAGCTTCTTTCATCTTTATAGCATCTTGTTTTATCGCGTGCATGGCTTCTAAAGATTTTTCATCTCCAAGCTTTCCTTTTTTATGCTCTTCTATATCTTTTGCTTCTCTTGTGATATTTGTAAAATAAAGCACAGTTCTAGCTTCAAGCTCACTAGCTATCCAGTTTTTAATACGCAAAGGATTAACAATGACTCTTTTATTGTTATAAAATTCCATAAAATTAAAACCACCAAAAGTTGCGGCGTATTGATCTTGTGCTCCACCTACTATGCCTAAATCTTCTCTTTCTATCTCGTAAGCAAGTTTAGCGATTTCATATTCTCCTAAAGGTAGATTAAGCCATTCTGCAAAGGCTTTTATAACCCCTACAACCAAAGTTGAGCTTCCGCCCAAGCCACTACCACTTGGTACATCCGAATAGGTATGCAAAGAAAAACTCAAAGGTTTTTTTGTAAAATCTTTTACAATGCGATTATAAATACTTTTAAAAATATCTAATTTTCCATCATTTCCTAAGAATTCTTTACTTTCGTACTCACAGTAAGAATTTGTATCAGGAGAATCAAAAATGATTTTTCCATCTTCTCTTTTGATCAAAGTACAATGTATGTATAAAGATATAGTCGCATTTAAAACATAACCTGTATATTTATCACAATATAAATTTATATCAGTCCCACCACCTGCTAGACCGAGACGAAGAGGAGTTTGTGTGCGTATGGTTTTCATAAATCTCCTAATTTATTTATCATATCCAATCAAGTAAAATATTTTGAATATTACATTTATTAATCAATTGCTTTAACTCCCCTATCTTTTTCTCTGAATCATCAAACATATATTCATGTGTTTCACAAGCAATATAATCAATTTTTTTATATATTTTTTTTTCAATAATTTTTTTCATTATCTCAAACTCCATTCCTTCAATATCAAGTTTTAGAAAATAAATCCTTTTATGTTGTGTTAAAATTTCATTTTCGATAAACTCGCATAAATCAATTACTTGAACTTTATATGTTTTTTCCGTCTGACTGTCTTGTACACTTTCAACTATACGATTGCCTTGAGATAGTATCCTATTTCCAAACATAATAAAATCTGTTTCATAATTTCTGTCCGATACTGCTTTTTGAAAAAGTTTTACATTTATATTATTTTCATATTTTTTTCTTAAAAAATAATTTAAATAAATATTTGGCTCAAAGATATAACTTTGCCCGCCACAATGTAAAATAATATCAGTAATTAAGCCTGCATGTCCACCACAATCAATACATACTGGACGATATCCATCCCCCCCCCCATATTTATCGACATAAAGCATCTTGTAAAAAATATCATAATATTGTTTTGGAATTCTGGCATTATCTAATAACAAATTTAATCTACCAAGCCCTTGTGGATCGGCTATAGCACCCTGAATTAAATGCAATGCATTATAAACATTTTCTTGCTTATTCCAATGGTTTAATACTTGCAACTCTGAAATTATCCTTTCTACATCAGCTATTGGTTTCCTAGCTTGCTGATGATTATCAATTTGATAAATCAAGCCATTTAGAGCCTCTTTTAATACTTCCAATTGTTCTTTTTTCATTATTTATCTCCTTTAATTTTAATTAAAATTTGCAAAGCGATTAACTTTCATCATTTTAAACGCTCTTAAAAGCTCTTTAATACCATCTTCTAAAGTATTATCTGGTTTCCAACCTGTAGCCTCTAATTTAGTATTTGAAACCAAATAATCTCTTTTATCTGGATCTTCACCTATGTTGGCTGAATGGATATAAAAATCAGGAATATACTTTTTAATTGTTTCAGCAAGCTGTCTTTTGGTCAAATTTGCAGAACTTAATCCCATGTTATAAGCCTGACCCTTCATCTTATCATAATTCTCAATTCCATGAATAAATCCTTTAACCACATCGCGAACATGAATATAATTGCGTCTAAAATGCTCTTCAAAAAGCACTATAAATTTATCTCTATATGCACGATAAGTAAAATCATTAACAAGTAAATCAAGTCTCATTCTAGGTGAAATTCCAAAAACAGTAGCTAAACGAAAAGTCACACAATTTCCTTTATCGAGCAAATATTGCTCCGCATGCACTTTATCGATCCCATATTCTGAGATAGGACGCAAGGGAGATTCTTCAGTACACATTGCATCTTTTTCTCCTATACCATAACCGCTGTTTGTATTGGGATAAATAAATATTTGAGAAGGACTTGCAAAATCACTTATCATTTTTACGGCTTCATAATTGATCATTTTAGCTAATTTTGGATTTCTTTTACAAAGTGGAGCTCCAACTAAAGCAGCTAGAGGAATAATAATATCAGCTTTTGCTACCTCTTGCCTAATAAGATTTTCATCCATAGCATCACCATTTATAAAAGTAAAATTTTTATTATGAAAACAAGATAAAAGAGAAATTTGATCAAACATCAAATTATCAATCACACAAACTTCATAACCTTTTTCAAGTAAAATCGGCGTTAAAACCGAACCTATATAACCTGCACCACCTGTAATTAAAACTTTTTTTGACATACTTTTCCTTTCGTCTTTGAAAATCAATTTTGTGTTTTATACCATTCATACATCATTTTAATACCATCTTTAAGTTCAATTTTATGCTTCCAACCTAAAGAATGAATTTTTGAGCAATCCATAAGTCTATCCATTGTGCTATCCGGTCTAGAAGTATTGAAAACTAGTTCTCCGCTAAACCCAACTATATTTTTTACCATCAAAGCAACTTCTTTGATTGAATAGTCAATACCTGTCCCTATATTAATATGGGTATTTTTACTTTTTCTATCTTTAATAAGATCTTTAAAATCAATATTTTGCATCGTATAGATAGCTACATCGGCTAGATCGTCACTATGAATAAATTCTCTCCTAACTTTTCCAGTGCCCCAAATTTCTACACTTTTTTTACTAATTCCAAAATTATGCAAATATTCTTTTGCTTCTTCAAAATTATTCATTTTCAAATCTTGAAGGATTTGAGTTATATTACCCTCGCTTAACAATTTTGCTAAATGAAATTTTCTAAGCAATGCGGGTAAGACTCTTGATTTTCCAAAATCAAAATTTGCTTTAGTTCCGTAAAGATTATTTAAAACAAGAGTAATGAAATTAGTACCATATTGAATATTATAACTTTCACACATTATAGCTCCAGCTATTTTGGCTGCACCAAAAGAATAAGCGCCATATTCTAAATCACCTTGAAATAAATATTCCTCTTTCAATGGGTTTTTAGCATTCTCAGGATACATATACCCAGAACCAAAAAATACCAATTTTTTAACATTATTAAGAAATGAATTGTGAATAACATTGTTTTGAATCATCAAATTTTCATAAATAAAATCAGCCCTTTGAGCGACATTTGCAGCACCACAAGGTAAGACTGCAGTCAAAAAAACATATTCTGGCTTTTCTTCTTTAAAAAATTTAGCAACCGCTTGCTGATTAACCAAATCAAGCTCTTGCCTTGTTTTTAAAACAAGATTATTAAATCCTCTTTTTTGTAAGTTTTCTACCAATGCTGTACCTGCGGTTCCTTTGTGCCCCGCTATATATATTTTTGAATTTGTTTGCATCAATAACCTCTAAATCGTATTGGAATTTCTGGATTTGAAATCCAAGGAAAATCTAAATTTTTAAATCCCCCTGCGACATCTCTATATTTCATAATATCAAGATTAATCAAATTTTTTCTTAAATAACTAACCTCCAAAGTGGTACTAAAAAATAATCCTTGAGAATAAAAAATTTTCCCATGGTTGTGAAAATGTGTATGCATTGGAACAAAATATTCATTAAGTTTTTTTAGCAAACTTATTCTTTTTTCCACCCCATCTTGCTCCTCAGGATTGCACCCATGAAATTCAAATATAACTTGTGAGAAATATTTATTTAAAATACTTATATCAATATTTTCAAGCATATCCCATTCGCAATTTTCAATATCACATTGCAAAATATTTGGCTTGTTCTCATCTAAATTATTATCTTTTAAAGCTTGTACCAAAGTAATTGTATTCTCATTATTTACATTACCTATAAATTTTTTATGAAAAACAATATTTTCATGGTCATAAGGACATTTTTCTATACTAGCATCATATTCTATCACCTTAAATCCCCTCTGAGCCATTTCTAAATCCCAAGGAGAACTATCCGAAACACCCAAAGAAAGAGCTTTTGCATTAATATCACTCATATCCCCCCCCCCATTATACATCACATAACCACCATCTCCATTACCACCTATTCTTAACAAATCACACAAAGGCAATTCCAAAGGTCGAATGAGATTTAAATAATTTATAATATTTTGATAACATTGTTCATTATTATTTATACGAATATAATTTCTATCTCTTGCTTGTAATAATAAAAGTAAAATTTCTTTATCTTTTTTATCAATATCTAAATTCGAAATAATATTTGACATTAAGATTTGATAGGACAATTGATTGCTAAGTTTAATATTATTATTTAATTCTTTTAATAATTTTTCCATAATTTATCCTTTATTTTTAGTTGCAAGAATATCGCGATCGGAAAGAATAGGCGTATTTGTTGGCCAATCTATACCAATTCTTTCATCATTCCATGCATAAGTAAATTGATCAGGTGCATCCATATATTCCCCCTCATAAGCAAGTTTATAATAATACACTGCTTCCTTTGAACTCACATAATGAGAATTTCCCATATTTGGTGGTAATAAAATAAGTTGCTGATTTTTATAACTTATAATAAATTTCTCCCATTTTAAATAAGTTGGGGAATCTTTTCTGCAATCAACCACAACTTGATGCACTTCTCCATAGACACAAGTTACAAGTTTGTAAGTTTTCACATCTCCGTGTATTCCACGTAAAACATTAAAATGGGAATTTATAAATTTGTCATGCTTAAATTTAATTCCATCTGGAACCAACTTGCTTAAATATTCATCTGTAAAAGCTGTCCAAATTTCACCTCTTAAATCTCTAAATTTATTAGGAGTTATAATATACACTCCTTTTAAAATTTTTGATTCTTGTATATCAAATTCTATTGCCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP028910|1400532:1407168|1402817_1403669_-|WP_002857889.1|DBSCAN-SWA
MKKEQLEVLKEALNGLIYQIDNHQQARKPIADVERIISELQVLNHWNKQENVYNALHLIQGAIADPQGLGRLNLLLDNARIPKQYYDIFYKMLYVDKYGGGDGYRPVCIDCGGHAGLITDIILHCGGQSYIFEPNIYLNYFLRKKYENNINVKLFQKAVSDRNYETDFIMFGNRILSQGNRIVESVQDSQTEKTYKVQVIDLCEFIENEILTQHKRIYFLKLDIEGMEFEIMKKIIEKKIYKKIDYIACETHEYMFDDSEKKIGELKQLINKCNIQNILLDWI
>NZ_CP028910|1400532:1407168|1403687_1404629_-|WP_002858299.1|DBSCAN-SWA
MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLSCFHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVKMISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGNCVTFRLATVFGISPRMRLDLLVNDFTYRAYRDKFIVLFEEHFRRNYIHVRDVVKGFIHGIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYIPDFYIHSANIGEDPDKRDYLVSNTKLEATGWKPDNTLEDGIKELLRAFKMMKVNRFANFN
>NZ_CP028910|1400532:1407168|1405692_1406619_-|WP_002864204.1|DBSCAN-SWA
MEKLLKELNNNIKLSNQLSYQILMSNIISNLDIDKKDKEILLLLLQARDRNYIRINNNEQCYQNIINYLNLIRPLELPLCDLLRIGGNGDGGYVMYNGGGDMSDINAKALSLGVSDSSPWDLEMAQRGFKVIEYDASIEKCPYDHENIVFHKKFIGNVNNENTITLVQALKDNNLDENKPNILQCDIENCEWDMLENIDISILNKYFSQVIFEFHGCNPEEQDGVEKRISLLKKLNEYFVPMHTHFHNHGKIFYSQGLFFSTTLEVSYLRKNLINLDIMKYRDVAGGFKNLDFPWISNPEIPIRFRGY
>NZ_CP028910|1400532:1407168|1401778_1402798_-|WP_002858413.1|DBSCAN-SWA
MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIKREDGKIIFDSPDTNSYCEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFRADFGTLAQILGKSWRSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALRKEQGYVQDFSFTKEGVKSWRI
>NZ_CP028910|1400532:1407168|1401185_1401791_-|WP_002857991.1|DBSCAN-SWA
MENLNSYIKGHFADSILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYENLFARQVQAQGVKGDVFIGISTSGNSKNILKALEFCKQKEIISIGLSGASGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ
>NZ_CP028910|1400532:1407168|1400532_1401198_-|WP_002857908.1|DBSCAN-SWA
MQAIILCGGLGTRLKSIIKDIPKPMAPINDKPFLEFIFEYLKKQGIKEVILAVSYKYEVIKEYFKDEFLGIKIKYSIEKEPLGTGGAIKETLKFVKNEAYVLNGDTFFDIDLSKLKLNESKICLALKQMNDFDRYGTVNVDEQDLVISFEEKVFKKQGLINGGIYLLTKDIFNDFALQEKFSFEEFLQENYKKLKARACIFDDYFIDIGVPEDYYHFLINN
>NZ_CP028910|1400532:1407168|1406622_1407168_-|WP_002858190.1|DBSCAN-SWA
MAIEFDIQESKILKGVYIITPNKFRDLRGEIWTAFTDEYLSKLVPDGIKFKHDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWEKFIISYKNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEYMDAPDQFTYAWNDERIGIDWPTNTPILSDRDILATKNKG
>NZ_CP028910|1400532:1407168|1404652_1405693_-|WP_002864205.1|DBSCAN-SWA
MQTNSKIYIAGHKGTAGTALVENLQKRGFNNLVLKTRQELDLVNQQAVAKFFKEEKPEYVFLTAVLPCGAANVAQRADFIYENLMIQNNVIHNSFLNNVKKLVFFGSGYMYPENAKNPLKEEYLFQGDLEYGAYSFGAAKIAGAIMCESYNIQYGTNFITLVLNNLYGTKANFDFGKSRVLPALLRKFHLAKLLSEGNITQILQDLKMNNFEEAKEYLHNFGISKKSVEIWGTGKVRREFIHSDDLADVAIYTMQNIDFKDLIKDRKSKNTHINIGTGIDYSIKEVALMVKNIVGFSGELVFNTSRPDSTMDRLMDCSKIHSLGWKHKIELKDGIKMMYEWYKTQN

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002857908.1|1400532_1401198_-	D-glycero-D-manno-heptose 1-phosphate guanosyltransferase	A0A2K9L821	Tupanvirus	4.1e-08	26.6
WP_002857991.1|1401185_1401791_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	2.2e-16	35.0
WP_002858413.1|1401778_1402798_-	D-glycero-D-manno-heptose 7-phosphate kinase	A0A222YW25	Synechococcus_phage	2.7e-59	40.7
WP_002857889.1|1402817_1403669_-	FkbM family methyltransferase	NA	NA	NA	NA
WP_002858299.1|1403687_1404629_-	NAD-dependent epimerase/dehydratase	A0A0F7LC08	uncultured_marine_virus	1.0e-73	46.1
WP_002864205.1|1404652_1405693_-	GDP-L-fucose synthase	M1HWW2	Paramecium_bursaria_Chlorella_virus	1.7e-69	44.4
WP_002864204.1|1405692_1406619_-	hypothetical protein	NA	NA	NA	NA
WP_002858190.1|1406622_1407168_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A1D8EQH2	Escherichia_phage	6.1e-18	32.4