CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP028912	Campylobacter jejuni strain NCTC 12664 chromosome, complete genome	3 crisprs	DEDDh,WYL,cas14j,cas2,cas1	0	5	1	0

1. NZ_CP028912

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP028912_1

• CRISPR_ID: NZ_CP028912_1
• CRISPR_location: 59345-59508
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP028912_1

Consensus_repeat	Method
AATTTAAATAAAGAAAA	PILER-CR

spacers of NZ_CP028912_1

>1.1|59362|55|NZ_CP028912|PILER-CR
CAAAGACTTAAACAAAGATTTTAATAAAGAGTTAAATAAAAATCAAGAAAAAAAC
>1.2|59434|58|NZ_CP028912|PILER-CR
TATACAAGATCAAAATAAAAATTTAAAGAACAATAATCAAAATTTAAATCTTGATAAA

CRISPR arrays and Neighbor proteins around NZ_CP028912_1

CRISPR arrays

The CRISPR arrays of NZ_CP028912_1

>merge|NZ_CP028912|1|59345-59508|PILER-CR
AATTTAAATAAAGAAAACAAAGACTTAAACAAAGATTTTAATAAAGAGTTAAATAAAAATCAAGAAAAAAACAATTTAAATCAAGAAAATATACAAGATCAAAATAAAAATTTAAAGAACAATAATCAAAATTTAAATCTTGATAAAAATTTAAATAAAGAAAT

>NZ_CP028912|1|1|59345-59508|PILER-CR
AATTTAAATAAAGAAAA	CAAAGACTTAAACAAAGATTTTAATAAAGAGTTAAATAAAAATCAAGAAAAAAAC
AATTTAAATCAAGAAAA	TATACAAGATCAAAATAAAAATTTAAAGAACAATAATCAAAATTTAAATCTTGATAAA
AATTTAAATAAAGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP028912.1|WP_108614525.1|48425_50882_+|hypothetical-protein	unknown	unknown	gnl|CDD|377898
NZ_CP028912.1|WP_108614527.1|52914_54264_+|DUF2130-domain-containing-protein	unknown	unknown	gnl|CDD|226889
NZ_CP028912.1|WP_002851677.1|68358_68964_-|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|224527
NZ_CP028912.1|WP_002800617.1|43194_44592_+|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	gnl|CDD|379536
NZ_CP028912.1|WP_002887116.1|67069_67291_+|2-oxoglutarate-translocator	unknown	unknown	gnl|CDD|273267
NZ_CP028912.1|WP_002805290.1|60285_61170_+|flagellar-basal-body-rod-modification-protein	unknown	unknown	gnl|CDD|139245
NZ_CP028912.1|WP_108614530.1|69085_69817_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP028912.1|WP_002851645.1|62814_64686_-|DUF342-domain-containing-protein	unknown	unknown	gnl|CDD|377177
NZ_CP028912.1|WP_108614526.1|51609_52812_-|multidrug-effflux-MFS-transporter	unknown	unknown	gnl|CDD|340878
NZ_CP028912.1|WP_002866314.1|50911_51613_-|SIMPL-domain-containing-protein	unknown	unknown	gnl|CDD|225414
NZ_CP028912.1|WP_002859745.1|56155_57964_-|translational-GTPase-TypA	unknown	unknown	gnl|CDD|224138
NZ_CP028912.1|WP_002866317.1|55508_56156_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP028912.1|WP_002860564.1|54287_55331_-|c-type-cytochrome	unknown	unknown	gnl|CDD|225797
NZ_CP028912.1|WP_002805291.1|61173_62811_+|flagellar-hook-protein-FlgE	unknown	unknown	gnl|CDD|224663
NZ_CP028912.1|WP_002851977.1|67342_68359_-|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl|CDD|234664
NZ_CP028912.1|WP_002851856.1|66780_66948_+|2-oxoglutarate-translocator	unknown	unknown	gnl|CDD|279307
NZ_CP028912.1|WP_002868354.1|65906_66056_+|sodium:sulfate-symporter	unknown	unknown	unknown
NZ_CP028912.1|WP_014516663.1|64642_65407_-|bacteriohemerythrin	unknown	unknown	gnl|CDD|225331
NZ_CP028912.1|WP_108614524.1|44652_48426_+|restriction-endonuclease	unknown	unknown	gnl|CDD|223934
NZ_CP028912.1|WP_002824650.1|58098_58422_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP028912.1|WP_108614525.1|48425_50882_+|hypothetical-protein	gnl|CDD|377898	pfam07695, 7TMR-DISM_7TM, 7TM diverse intracellular signalling. This entry represents the transmembrane region of the 7TM-DISM (7TM Receptors with Diverse Intracellular Signalling Modules).	0.000746122
NZ_CP028912.1|WP_108614527.1|52914_54264_+|DUF2130-domain-containing-protein	gnl|CDD|226889	COG4487, COG4487, Uncharacterized protein conserved in bacteria [Function unknown].	1.20824e-83
NZ_CP028912.1|WP_002800617.1|43194_44592_+|PD-(D/E)XK-nuclease-family-protein	gnl|CDD|379536	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	3.86786e-40
NZ_CP028912.1|WP_002887116.1|67069_67291_+|2-oxoglutarate-translocator	gnl|CDD|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	1.00062e-08
NZ_CP028912.1|WP_002805290.1|60285_61170_+|flagellar-basal-body-rod-modification-protein	gnl|CDD|139245	PRK12812, flgD, flagellar basal body rod modification protein; Reviewed.	2.24585e-119
NZ_CP028912.1|WP_108614526.1|51609_52812_-|multidrug-effflux-MFS-transporter	gnl|CDD|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.55103e-87
NZ_CP028912.1|WP_002866314.1|50911_51613_-|SIMPL-domain-containing-protein	gnl|CDD|225414	COG2859, COG2859, Uncharacterized protein conserved in bacteria [Function unknown].	3.34681e-87
NZ_CP028912.1|WP_002851645.1|62814_64686_-|DUF342-domain-containing-protein	gnl|CDD|377177	pfam03961, FapA, Flagellar Assembly Protein A. Members of this family include FapA (flagellar assembly protein A), found in Vibrio vulnificus. The synthesis of flagella allows bacteria to respond to chemotaxis by facilitating motility. Studies examining the role of FapA show that the loss or delocalization of FapA results in a complete failure of the flagellar biosynthesis and motility in response to glucose mediated chemotaxis. The polar localization of FapA is required for flagellar synthesis, and dephosphorylated EIIAGlc (Glucose-permease IIA component) inhibited the polar localization of FapA through direct interaction.	6.1004e-32
NZ_CP028912.1|WP_002851977.1|67342_68359_-|tRNA-2-thiouridine(34)-synthase-MnmA	gnl|CDD|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	5.63815e-166
NZ_CP028912.1|WP_002859745.1|56155_57964_-|translational-GTPase-TypA	gnl|CDD|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_CP028912.1|WP_002805291.1|61173_62811_+|flagellar-hook-protein-FlgE	gnl|CDD|224663	COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion].	3.01394e-100
NZ_CP028912.1|WP_002851677.1|68358_68964_-|TIGR00730-family-Rossman-fold-protein	gnl|CDD|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	6.97948e-57
NZ_CP028912.1|WP_002851856.1|66780_66948_+|2-oxoglutarate-translocator	gnl|CDD|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	2.94889e-07
NZ_CP028912.1|WP_002860564.1|54287_55331_-|c-type-cytochrome	gnl|CDD|225797	COG3258, COG3258, Cytochrome c [Energy production and conversion].	2.65112e-130
NZ_CP028912.1|WP_108614524.1|44652_48426_+|restriction-endonuclease	gnl|CDD|223934	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms].	1.62601e-61
NZ_CP028912.1|WP_014516663.1|64642_65407_-|bacteriohemerythrin	gnl|CDD|225331	COG2703, COG2703, Hemerythrin [Inorganic ion transport and metabolism].	2.56238e-45

Protein sequences

>NZ_CP028912.1|WP_002824650.1|58098_58422_+|hypothetical-protein
MSKPLNEEIFIEFKSDLAERKNEVLLQVLELLETFRSDKNEKMARISSELTEILENEENLEKILNAKNLEELLNILIALNEDKMIKVYEDSYLKEKFPNVMVDKFLK
>NZ_CP028912.1|WP_002859745.1|56155_57964_-|translational-GTPase-TypA
MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDSNDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQEGVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFAIVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGSDENPLQLQVFTLGYDNFVGKIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIAGFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERLEAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDGVKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFRSQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLFIEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERALEWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS
>NZ_CP028912.1|WP_002866317.1|55508_56156_-|hypothetical-protein
MDLKSLENNRLYILKRLGILKFLSIIEALLVGFLAFVFIRDALIAVILAVFVGVFFFRFTAKKLKLAQKELQINALNLFLRRFGAKFKKQSLSQKDFLKLGLTKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILSANKNPSFENEEQIYIKLQDKNFTLNHVFSKENHYLIATLSNPFFIDIKKDLESNFKDLEENLNSIKNKLFK
>NZ_CP028912.1|WP_002860564.1|54287_55331_-|c-type-cytochrome
MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSKRPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCHMDNDGNGLPGTKKYVIPFLNILNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSKEMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGERGLGVKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDEDALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVKYGPWKNPNHFPGE
>NZ_CP028912.1|WP_108614527.1|52914_54264_+|DUF2130-domain-containing-protein
MQNLNQNEQIKCPNCGSFIDISTALYAQILDKAKQEMLKQKKEFDDEVNAKRAEYTKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLIQKQNFQKEFSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEEAFKEFKEQESKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQGSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILYESKRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTFNEFKGVLAVLRESIINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEKRALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED
>NZ_CP028912.1|WP_108614526.1|51609_52812_-|multidrug-effflux-MFS-transporter
MQKHTKIHGFAKFKLIVILALMSSIAPLSTDMYLPALSHVEQSFQTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDDIYAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGILLEYFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKRFLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGANALGFVVCANINARLALKYESEKILAKALMIMFISTVILLANAFFHPNFLLFELSIFTSIAMLGFIAPNTTTLAMARFKEHSGTASGVLGTVQFGFAGLISFVVGAINANTPIILAFVMCACVLVANMIYFLIRIKEKK
>NZ_CP028912.1|WP_002866314.1|50911_51613_-|SIMPL-domain-containing-protein
MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQKEVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLEKQGIKEDEISYNSPNIIDRLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEYLYTKLNDIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYIKTIRVVSTIEYYLKD
>NZ_CP028912.1|WP_108614525.1|48425_50882_+|hypothetical-protein
MDLVSSFLSKKNINNEEDIKFENYIKGEAKLNSEKQYIIESSCCFDGNKDNFKRHYDENKILEIHLNNMLFEQDLVFDNVKKLSLIINDNVKFNKLFINNCNELYLQFNGRVEVIDKISINDCKFKQISINNHIDGNIEFQKCEFNDFNLYGFSNATIKGTFTFDFCEIKEKVNFMNFEFENKVSFKMSKFKDNVYFNNSHFKDYVDFHECEFEKIACFYGVKFYKTPNFSACYFKEPKAVNLINVDIDKLDFKSVEKYIEDNYQDESYKNEHKLRYAKNLKDSFRVIKDVLITQNNTLEAQEWHKLELYAKEKELEIQLGGDNKDSIKNIQKIKKSVIKKPSNNPSNILAKIQSLSDKYIKICDFVVCFIMLIGRSIFGFLLSIIEIFCNVIKSICKIIQIILSCIFCIASIDRILKLEYLKFYRKISSLGKTMLDFTLWFDCVLLQVYRNTSNHHTNFLKILNFTILMISSYAIFGLLFLNNMDFILSFGPMTIAAMNYIVLLMLLIIFISLTRQLYQHGAILLFLIYGLFIISIVSFLSPIYIPAFYFLIYFVGILISYLLFICKIKLFIFISRLFAYICLIGVVILKPQLINPFVGIFSSDKLYESKFEKRLNDLNTSAIVNLASILQNDFNLHLKDQNISFTELNSAKALIIANKEKLKEILSKVYNDKYVSDYKKVLNELENNTSNVKNIIEEIDNKNNNSVVSAQLNKFLKLNFNQEIDILYAIKSNFSISEKLSPEQMALFDQKDSQDKLKSVLALLKFKSSFEGILKIINQDEITENTIKSTGVLYGIILLLCIFSLQKTARKNSIVPS
>NZ_CP028912.1|WP_108614524.1|44652_48426_+|restriction-endonuclease
MHFTLLNEKDFFNPYYRKKQIMQNEFDIFNKALMQYLERLESSQSENEDYLVANALSPFLTMLNFKTHIKTKQKGKSEIDLSISKDEFSKDLEVLIEAKKPNSKEFITHTKVNSKALHETILYYFRNREYSFSLKFIIITDFYKFYIFKISEFEELFYKNPSFKKLFEEFCNPNSLFKGNTEEFYKEVAKLIENSKENLKGFLIDLTFLKDKQKSNFKNLASIYKTFHRDFLLSEFNPNDANSLNNAFYKELLYILGLCESKQNSKLIIAKSEESKEEQGTFYTAINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFNDDKNLKFLNFKKIPDFDKLSELFFEVLAKEKSTRKKSEFAYLPYLNSSLFEKQSIENTLEISSLSNDLKLFYYKNTVLKDDKCKAKKGQVGLLEYLFEFLDSFDFGSDDEQSEILSQKELISSSVLGNVFEKLNGYKEGSFYTPSFITSYMCKESITKVVLDKFNAQFDLDAKDISELRRSLRKEDKKAQKELLNSIKICDPAVGSGHFLVSALNVMLSIYDELNLFDEEFYLEVQNDEILITGRKGEFIEYKRPSTPKDKAHLIQQELFHTKKDIIENNLFGVDINPNSCEITKLRLWIELLKHSFYQSFDDENYHDLKTLPNIDINIKCGNSLVSYFETGKSLNHYPNIKERMGKYKRIVKDYKEGFYTDKSHINQEIKNLKISFKNFCFADKFKKEMKSFNDKCEKYSKKYGNFLAVDDENLKFFVSANLTLFDFDEKEATKEFANLKKEYDNIFNLESNHPFEWRFEFPEILDDDGNFKGFDLIIGNPPYIRQEELKELKSHLAKNYKVYKGTSDIYTYFYELGFNVLKDRGGVLSYITSNKYTRAGYGEALREFLLKNVKVLEYTDLNGIKVFDSATVDTSILCFEKSKSKDNKFKYLALSNEILKTCAYDIGLYKDFAEFSQNSLSKESFTFSDENTSALKAKIERIGTPLKEWQGLNIYRGILTGYNEAFIITTEKRNEILANCKDEAEKERTAKLIRKMLRGRDIKRYSYEWAGLWVIFIPWHFPNVEKPKTMLENEQDLKEQYPSLYKHLLSHKERLSKRNKEETGIRYEWYCLQRWGANYYQEFEKEKLGWQRITQEPSFILERECILLDSMAFMVANSKNELKYLLGFLNSSLIFYYFKNIGHLYSDKGFLLSNQYVEKFPIPKINSKNQKIADELINLVDEILKAKEQDKNANTQELENKINSLTYKLYNLTEEEIKIIEGK
>NZ_CP028912.1|WP_002800617.1|43194_44592_+|PD-(D/E)XK-nuclease-family-protein
MEKFIERLLEEDIKFEKDVNNGLSDINIFDALNIETKENYHSKFIAYLIDINKDHYQKNFAKVFLEKLGKSLVNTKFENLNIEDIKSVETEACIKDNRRIDILITLSDKRYIIIENKIYAKDQKNQLKDYINFVRKNIKNIKDCYKNILTIYLHQDECASPSDYSLGNFTIKTNLIKDKNENNVSYYLKMDYIWIKEWIDECIKIYEEKSTKDQKFILDIQNIIFTLNQYKSILQWYMTDEYTQRDDVLEFIFQNNIKMQNLKNAMILYRYNKNKSELKNLNEENYKKAKDIIQHKWSNICEYIIEEFFDSFEHKEIKIGDITFIGNKIEENRVNHGVFIFYPIDYKNESIYPCIYIYFKKKYYDIIGLTFEISNDDEEDIENEKYKECLKLFKDVKEENVRKYQNHYYCDKLINNEKLEGEYAFIYWLIENQNSKKDFIQILNDFFIKKPIQEAYKGINDILNS
>NZ_CP028912.1|WP_002805290.1|60285_61170_+|flagellar-basal-body-rod-modification-protein
MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNATLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQKLSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYDSNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGVVFKDGVAYAKMAGQEVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSDGDSSGSGSTEDGDKEEKA
>NZ_CP028912.1|WP_002805291.1|61173_62811_+|flagellar-hook-protein-FlgE
MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDPSKFNITKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFKSNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQEGDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGSPYDANKPGSGYSGIYIKQGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR
>NZ_CP028912.1|WP_002851645.1|62814_64686_-|DUF342-domain-containing-protein
MNFQVKTLETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKPAKTKTYERKDFDLFYADDFFVKNYNTIVQKFLIEIYPKTQSFPFTVKLRSNSNLTHLKASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSIKEIELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIYRILGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHTGYCIANNLKLSQIGLKTTGSIKTNTDENINLEITNFDISDDAIKSGIVNVQASNIKVNGNVGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKNVFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSDTECENLKNLSLKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPSAIEMKFSNLYHDIIKKYNHLSISYKKLVKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPNTNTNLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS
>NZ_CP028912.1|WP_014516663.1|64642_65407_-|bacteriohemerythrin
MEVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRAEKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGIDEFSSKNLRNFQSF
>NZ_CP028912.1|WP_002868354.1|65906_66056_+|sodium:sulfate-symporter
MEDNSWHFLGLFIAVIMAVILQVMPLGAVCMIAIAIVALSGITTTQLKI
>NZ_CP028912.1|WP_002851856.1|66780_66948_+|2-oxoglutarate-translocator
MALLGLSLVLISGVLTFGEVLAEKAAWNTLVWFSALVMMATLLGKLGVTQFLAEA
>NZ_CP028912.1|WP_002887116.1|67069_67291_+|2-oxoglutarate-translocator
MFFIVQLALGAPPLFYAFIMIASGNVMMALTHYAIGTAPVIFGTGCVTLKKWWSTGFVISIVDIVVMIAVGLV
>NZ_CP028912.1|WP_002851977.1|67342_68359_-|tRNA-2-thiouridine(34)-synthase-MnmA
MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEENIKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGKHEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFNLKNINLFIDAKELDCEVKIRYRSKSTPCKVEIYEDKSAKIILKDPVYGLASGQMAVFYDHDKVIASGFIE
>NZ_CP028912.1|WP_002851677.1|68358_68964_-|TIGR00730-family-Rossman-fold-protein
MNEKISQDLEKFANIPNLKNAVTFFGSARLKEDNFYYQQAKILAQKCVQNGFCVISGGGGGIMRAANEGAFSQKNNTNSMSSVGFNIFLPHEQKLNDFVEYNITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGSEFWRGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINTLKEI
>NZ_CP028912.1|WP_108614530.1|69085_69817_-|hypothetical-protein
MINGINFNLNHHHTILNLNNKKEDEKFSNNTMTENSIYRGEKFEFNSKIFGLDKSISKKDMKKFNNFMKSNALKDPNKIEKSSLKNLGKDYNSWDIKDEDIKLMNFSSYSQMFNLGSDITKKASNFRKEFNNLMQEDLTLEEFKTKYLDFKQRHDEFVKEFEIAMGDKMLLNDNNDTSIQENKETYKDDNTRNDLVKKLLEGKFSTSKELELLFGMKFSDDDAGEFNKILSLNSTPKSIDIKA

Crispr_ID: NZ_CP028912_2

• CRISPR_ID: NZ_CP028912_2
• CRISPR_location: 1338096-1338175
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP028912_2

Consensus_repeat	Method
TCTTTTTGTTCTTTTAAAGCTTC	CRISPRCasFinder

spacers of NZ_CP028912_2

>2.1|1338119|34|NZ_CP028912|CRISPRCasFinder
TTTTTTAGCTTTATACTCAGCCTTACTCATATAA

CRISPR arrays and Neighbor proteins around NZ_CP028912_2

CRISPR arrays

The CRISPR arrays of NZ_CP028912_2

>merge|NZ_CP028912|2|1338096-1338175|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTCTTTTTTAGCTTTATACTCAGCCTTACTCATATAATCTTTTTGTTCTTTTAAAGCATC

>NZ_CP028912|2|1|1338096-1338175|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTC	TTTTTTAGCTTTATACTCAGCCTTACTCATATAA
TCTTTTTGTTCTTTTAAAGCATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP028912.1|WP_002903881.1|1345002_1347072_-|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|226093
NZ_CP028912.1|WP_002779147.1|1329807_1330032_+|ferrous-iron-transport-protein-A	unknown	unknown	gnl|CDD|224830
NZ_CP028912.1|WP_002855518.1|1340853_1341273_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP028912.1|WP_002825806.1|1340505_1340853_+|holo-ACP-synthase	unknown	unknown	gnl|CDD|223807
NZ_CP028912.1|WP_002855470.1|1337122_1337668_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl|CDD|223985
NZ_CP028912.1|WP_002890764.1|1341269_1342631_-|cytochrome-P450	unknown	unknown	gnl|CDD|225035
NZ_CP028912.1|WP_002857989.1|1327011_1328379_+|adenylosuccinate-lyase	unknown	unknown	gnl|CDD|176469
NZ_CP028912.1|WP_002780456.1|1333363_1334188_-|enoyl-ACP-reductase-FabI	unknown	unknown	gnl|CDD|181416
NZ_CP028912.1|WP_002780453.1|1336064_1337063_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223135
NZ_CP028912.1|WP_002865443.1|1330028_1331870_+|ferrous-iron-transport-protein-B	unknown	unknown	gnl|CDD|223447
NZ_CP028912.1|WP_002855324.1|1334859_1336062_-|phosphoglycerate-kinase	unknown	unknown	gnl|CDD|234613
NZ_CP028912.1|WP_002855528.1|1334191_1334863_-|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NZ_CP028912.1|WP_002890768.1|1343821_1345006_-|capsule-polysaccharide-modification-protein-KpsS	unknown	unknown	gnl|CDD|226092
NZ_CP028912.1|WP_002855339.1|1337695_1338022_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|223870
NZ_CP028912.1|WP_002855429.1|1339969_1340506_+|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl|CDD|181433
NZ_CP028912.1|WP_002903883.1|1347068_1347581_-|adenylyl-sulfate-kinase	unknown	unknown	gnl|CDD|235498
NZ_CP028912.1|WP_002875234.1|1347570_1348332_-|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|224134
NZ_CP028912.1|WP_002903876.1|1331866_1333360_-|hydrogenase-small-subunit	unknown	unknown	gnl|CDD|224654
NZ_CP028912.1|WP_002890766.1|1342627_1343749_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP028912.1|WP_002852383.1|1338477_1339848_-|phosphoglucosamine-mutase-PgmL	unknown	unknown	gnl|CDD|100091

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP028912.1|WP_002903881.1|1345002_1347072_-|capsular-polysaccharide-biosynthesis-protein	gnl|CDD|226093	COG3563, KpsC, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP028912.1|WP_002779147.1|1329807_1330032_+|ferrous-iron-transport-protein-A	gnl|CDD|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.69416e-22
NZ_CP028912.1|WP_002825806.1|1340505_1340853_+|holo-ACP-synthase	gnl|CDD|223807	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism].	3.71491e-40
NZ_CP028912.1|WP_002855470.1|1337122_1337668_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl|CDD|223985	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].	3.16494e-57
NZ_CP028912.1|WP_002890764.1|1341269_1342631_-|cytochrome-P450	gnl|CDD|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.49806e-79
NZ_CP028912.1|WP_002857989.1|1327011_1328379_+|adenylosuccinate-lyase	gnl|CDD|176469	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.	0
NZ_CP028912.1|WP_002780456.1|1333363_1334188_-|enoyl-ACP-reductase-FabI	gnl|CDD|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP028912.1|WP_002780453.1|1336064_1337063_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	2.96117e-168
NZ_CP028912.1|WP_002865443.1|1330028_1331870_+|ferrous-iron-transport-protein-B	gnl|CDD|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP028912.1|WP_002855324.1|1334859_1336062_-|phosphoglycerate-kinase	gnl|CDD|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP028912.1|WP_002855528.1|1334191_1334863_-|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.79646e-86
NZ_CP028912.1|WP_002890768.1|1343821_1345006_-|capsule-polysaccharide-modification-protein-KpsS	gnl|CDD|226092	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP028912.1|WP_002855339.1|1337695_1338022_+|ribosome-silencing-factor	gnl|CDD|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	8.97235e-38
NZ_CP028912.1|WP_002855429.1|1339969_1340506_+|flagellar-basal-body-associated-protein-FliL	gnl|CDD|181433	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.19231e-91
NZ_CP028912.1|WP_002903883.1|1347068_1347581_-|adenylyl-sulfate-kinase	gnl|CDD|235498	PRK05541, PRK05541, adenylylsulfate kinase; Provisional.	6.18403e-101
NZ_CP028912.1|WP_002875234.1|1347570_1348332_-|NTP-transferase-domain-containing-protein	gnl|CDD|224134	COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane].	5.48264e-74
NZ_CP028912.1|WP_002903876.1|1331866_1333360_-|hydrogenase-small-subunit	gnl|CDD|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	4.03495e-157
NZ_CP028912.1|WP_002852383.1|1338477_1339848_-|phosphoglucosamine-mutase-PgmL	gnl|CDD|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0

Protein sequences

>NZ_CP028912.1|WP_002855339.1|1337695_1338022_+|ribosome-silencing-factor
MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKGRV
>NZ_CP028912.1|WP_002855470.1|1337122_1337668_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKIALFGGSFDPPHNGHNSVILEALEKLDIDKLIIMPTYINPFKQNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNTNEVCEEIKDEVKKYYEKLQKN
>NZ_CP028912.1|WP_002780453.1|1336064_1337063_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDDERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA
>NZ_CP028912.1|WP_002855324.1|1334859_1336062_-|phosphoglycerate-kinase
MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKENE
>NZ_CP028912.1|WP_002855528.1|1334191_1334863_-|triose-phosphate-isomerase
MIFAANLKCNHTRASFKIYAKILNKTMGVKCDDIIVFPPSIAFLENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGVSAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFIKLIKG
>NZ_CP028912.1|WP_002780456.1|1333363_1334188_-|enoyl-ACP-reductase-FabI
MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG
>NZ_CP028912.1|WP_002903876.1|1331866_1333360_-|hydrogenase-small-subunit
MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLSLGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKGPYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYTFIEQNFDENPMPSKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAEKPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKTFGDNITKISSLKAS
>NZ_CP028912.1|WP_002865443.1|1330028_1331870_+|ferrous-iron-transport-protein-B
MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKTFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKIIILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNTLGEFVKNNISNTFIASALADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFQPLELDWKLSVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIYNPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN
>NZ_CP028912.1|WP_002779147.1|1329807_1330032_+|ferrous-iron-transport-protein-A
MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSLKNATIMVELDTSCVILRSDEAKTIEVNLI
>NZ_CP028912.1|WP_002857989.1|1327011_1328379_+|adenylosuccinate-lyase
MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKAQAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEYVHFRVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQALPITFGHKVAIWLSELDRHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLENLGLEVPNISWQSTRDRFIELGFVLGNINATFNKIAHQLLILSHNEIDEVAEPFGKGQVGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMFLMLSVVLANMKFALSDLEVKKDKMLKNLDTLKGFVLAERVMFALSDHYGKQHAHEIVYENAMLGIEQQKTFKEVLLADTRVSQVLKEKDIDALLDATSYVGYAPKLVDEFLAKIKNSAILK
>NZ_CP028912.1|WP_002852383.1|1338477_1339848_-|phosphoglucosamine-mutase-PgmL
MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILSLYVKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAKPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTYVFCGDELCYLFAKNIPNPRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEIKARLKN
>NZ_CP028912.1|WP_002855429.1|1339969_1340506_+|flagellar-basal-body-associated-protein-FliL
MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDFVVS
>NZ_CP028912.1|WP_002825806.1|1340505_1340853_+|holo-ACP-synthase
MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAGLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSISHDNGFAIAIVAIV
>NZ_CP028912.1|WP_002855518.1|1340853_1341273_-|hypothetical-protein
MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGYLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKITDFFQKDHCKRANKREQPVVDFIISRNLDKQTIGK
>NZ_CP028912.1|WP_002890764.1|1341269_1342631_-|cytochrome-P450
MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVKMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMSSKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQVLSDIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKRKL
>NZ_CP028912.1|WP_002890766.1|1342627_1343749_-|hypothetical-protein
MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKVDLSKIEKNEQFPFFQISCEGVQTTYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKFGKESIYQLITGYYPFFYVLFSLLFSLVVAFGSFAFLQNYMHFSLAIIIGCFLGFLLNHFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQERIKLFANTIVDKLKQNENKQDYELVLVAHSVGTIVCIEVLECILRQNLDLSLLHKLKILTLGECIPLVSYQKKADEFRKKLEFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI
>NZ_CP028912.1|WP_002890768.1|1343821_1345006_-|capsule-polysaccharide-modification-protein-KpsS
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHTKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK
>NZ_CP028912.1|WP_002903881.1|1345002_1347072_-|capsular-polysaccharide-biosynthesis-protein
MKHYSISKKLIANVRNFYTISLYKKNSKINKDDLFLGWGRKKSGLKAINLAKKYKAKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDATAPSKLENLLNTYEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDASLEFGLAKGFKTVDMIKDAIKENPKSKIYIKIHPDVLSGKKQSDLDINSLPKECILITENFNPVALLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKRSLEEVFYVAYILYAEYFNPYLNQKSNIFDTIQTLAKYKDIEKANSNRLFFFGFSKWKRKFVKPFFIAKNNEIIFLDFLDCLKNIQLKENDKFFIWGKRIDYNALKTTLIKKAQDENLLHFTPKISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKASKLEELLQNEIFDENMLNRAKNIIKILLENRFSKYNGLKHEDLKINVKTGQKIILIPAQVEDDASMILGGFGLSTLDLLKEVRSKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSAIKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRTRKLSLEELVAGALIAYPRYINPKTKTLCEIEVCLDIMLNLQKAYFSKKYIKLAIDFKTFMLRKIRRFYEFLAKK
>NZ_CP028912.1|WP_002903883.1|1347068_1347581_-|adenylyl-sulfate-kinase
MINSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDELREILGHYAYDRQGRIDMALKRAKFAKFLNDQGMMVIVTTISMFNEIYDYNRKQLKNYYEIYIECDMHELMQRDQKGLYTKALNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEKVELIIKKLAL
>NZ_CP028912.1|WP_002875234.1|1347570_1348332_-|NTP-transferase-domain-containing-protein
MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSAGINEIAVVGGYLNEVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFILKCIEEKQDLIISYADIVYFQDCVQKLINAKEELAIVVDKSWRKLWSKRFANPLEDAETLKMTNGYIIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYGMLDRDILYDNKNFENMYMTSFLQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIDK

Crispr_ID: NZ_CP028912_3

• CRISPR_ID: NZ_CP028912_3
• CRISPR_location: 1447817-1448050
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 3 spacers
• Cas_protein_info: cas2,cas1

Consensus repeat of NZ_CP028912_3

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRT
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder

spacers of NZ_CP028912_3

>3.1|1447853|30|NZ_CP028912|CRT
TAGTAGCTAAGAATAAAATAAGAAACACTG
>3.2|1447919|30|NZ_CP028912|CRT
GTTGGAATGCTTAAGCAGGGGTGGAGTGAA
>3.3|1447985|30|NZ_CP028912|CRT
GTTAAAAGGATTTTGCTTTGCGATTGGGAA
>3.4|1447853|31|NZ_CP028912|PILER-CR,CRISPRCasFinder
TAGTAGCTAAGAATAAAATAAGAAACACTGG
>3.5|1447919|31|NZ_CP028912|PILER-CR,CRISPRCasFinder
GTTGGAATGCTTAAGCAGGGGTGGAGTGAAG
>3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder
GTTAAAAGGATTTTGCTTTGCGATTGGGAAG

CRISPR arrays and Neighbor proteins around NZ_CP028912_3

CRISPR arrays

The CRISPR arrays of NZ_CP028912_3

>merge|NZ_CP028912|3|1447817-1448050|CRT,PILER-CR,CRISPRCasFinder
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTAGTAGCTAAGAATAAAATAAGAAACACTGGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGTTGGAATGCTTAAGCAGGGGTGGAGTGAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGTTAAAAGGATTTTGCTTTGCGATTGGGAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP028912|3|1|1447817-1448050|CRT
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TAGTAGCTAAGAATAAAATAAGAAACACTG
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTGGAATGCTTAAGCAGGGGTGGAGTGAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTAAAAGGATTTTGCTTTGCGATTGGGAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP028912|3|2|1447818-1448050|PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TAGTAGCTAAGAATAAAATAAGAAACACTGG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTGGAATGCTTAAGCAGGGGTGGAGTGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTAAAAGGATTTTGCTTTGCGATTGGGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP028912|3|2|1447818-1448050|CRISPRCasFinder
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TAGTAGCTAAGAATAAAATAAGAAACACTGG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTGGAATGCTTAAGCAGGGGTGGAGTGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTAAAAGGATTTTGCTTTGCGATTGGGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP028912.1|WP_002868028.1|1444291_1445833_+|multicopper-oxidase-CueO	unknown	unknown	gnl|CDD|225043
NZ_CP028912.1|WP_002851421.1|1460148_1460973_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl|CDD|273443
NZ_CP028912.1|WP_079005335.1|1442002_1442716_-|hypothetical-protein	unknown	unknown	gnl|CDD|225916
NZ_CP028912.1|WP_002851537.1|1441836_1442028_-|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl|CDD|236534
NZ_CP028912.1|WP_002851174.1|1437465_1438398_-|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl|CDD|130645
NZ_CP028912.1|WP_010891941.1|1439032_1441837_-|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl|CDD|239153
NZ_CP028912.1|WP_002851546.1|1458355_1458805_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NZ_CP028912.1|WP_002876346.1|1454149_1455139_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439
NZ_CP028912.1|WP_002781229.1|1446056_1446503_+|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|223391
NZ_CP028912.1|WP_002876348.1|1455801_1456551_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NZ_CP028912.1|WP_002858431.1|1443019_1444168_-|carboxynorspermidine-decarboxylase	unknown	unknown	gnl|CDD|273414
NZ_CP028912.1|WP_002819068.1|1448618_1449509_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NZ_CP028912.1|WP_002890120.1|1455199_1455805_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NZ_CP028912.1|WP_002851264.1|1438394_1439036_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319893
NZ_CP028912.1|WP_002858151.1|1446506_1447697_+|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl|CDD|223380
NZ_CP028912.1|WP_108614574.1|1457253_1458291_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NZ_CP028912.1|WP_002855462.1|1458934_1460155_-|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|235168
NZ_CP028912.1|WP_002851407.1|1456525_1457257_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	unknown	unknown	gnl|CDD|225539
NZ_CP028912.1|WP_002876340.1|1448194_1448626_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP028912.1|WP_002779488.1|1445834_1446056_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|224888

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP028912.1|WP_002819068.1|1448618_1449509_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	1.6e-98	323.9	9.5
NZ_CP028912.1|WP_002876340.1|1448194_1448626_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	9e-59	191.5	1.4

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP028912.1|WP_002868028.1|1444291_1445833_+|multicopper-oxidase-CueO	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.19169e-120
NZ_CP028912.1|WP_002851421.1|1460148_1460973_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl|CDD|273443	TIGR01099, UTP--glucose-1-phosphate_uridylyltransferase, UTP--glucose-1-phosphate uridylyltransferase. Built to distinquish between the highly similar genes galU and galF [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	4.22554e-163
NZ_CP028912.1|WP_079005335.1|1442002_1442716_-|hypothetical-protein	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000778983
NZ_CP028912.1|WP_002851537.1|1441836_1442028_-|twin-arginine-translocation-signal-domain-containing-protein	gnl|CDD|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NZ_CP028912.1|WP_002851174.1|1437465_1438398_-|formate-dehydrogenase-subunit-gamma	gnl|CDD|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.78832e-90
NZ_CP028912.1|WP_010891941.1|1439032_1441837_-|formate-dehydrogenase-subunit-alpha	gnl|CDD|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP028912.1|WP_002851546.1|1458355_1458805_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NZ_CP028912.1|WP_002876346.1|1454149_1455139_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP028912.1|WP_002781229.1|1446056_1446503_+|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	1.4187e-43
NZ_CP028912.1|WP_002876348.1|1455801_1456551_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	1.04959e-92
NZ_CP028912.1|WP_002858431.1|1443019_1444168_-|carboxynorspermidine-decarboxylase	gnl|CDD|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP028912.1|WP_002819068.1|1448618_1449509_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.92431e-121
NZ_CP028912.1|WP_002890120.1|1455199_1455805_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	3.96096e-68
NZ_CP028912.1|WP_002851264.1|1438394_1439036_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57
NZ_CP028912.1|WP_002858151.1|1446506_1447697_+|molybdopterin-molybdotransferase-MoeA	gnl|CDD|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	2.37307e-143
NZ_CP028912.1|WP_108614574.1|1457253_1458291_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	7.0748e-34
NZ_CP028912.1|WP_002855462.1|1458934_1460155_-|glucose-6-phosphate-isomerase	gnl|CDD|235168	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP028912.1|WP_002851407.1|1456525_1457257_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	gnl|CDD|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	2.12305e-102
NZ_CP028912.1|WP_002876340.1|1448194_1448626_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	8.44618e-59
NZ_CP028912.1|WP_002779488.1|1445834_1446056_+|MoaD/ThiS-family-protein	gnl|CDD|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	1.67964e-11

Protein sequences

>NZ_CP028912.1|WP_002858151.1|1446506_1447697_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENIRIENNTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYTREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDIIFMP
>NZ_CP028912.1|WP_002781229.1|1446056_1446503_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGGIEALSFDIYESLLKKWFDEWQKRVDFDGISLLFAHSIGDVAIHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NZ_CP028912.1|WP_002779488.1|1445834_1446056_+|MoaD/ThiS-family-protein
MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKDGDKIALLPPVCGG
>NZ_CP028912.1|WP_002868028.1|1444291_1445833_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEESNTLFLASISLKKEKLELPKNLKIFKPLEEPKEFKEIIMSEDHMQMHGMMGKSENELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRAFRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_CP028912.1|WP_002858431.1|1443019_1444168_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCEESAGALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLNAKNELQMIREFSYKDYSLRN
>NZ_CP028912.1|WP_079005335.1|1442002_1442716_-|hypothetical-protein
MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NZ_CP028912.1|WP_002851537.1|1441836_1442028_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NZ_CP028912.1|WP_010891941.1|1439032_1441837_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAYYIRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTVEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_CP028912.1|WP_002851264.1|1438394_1439036_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_CP028912.1|WP_002851174.1|1437465_1438398_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGEVFGGGVFVRVCKNLHAFATILFIISIIPMFLCWIKRMLPASYDIRWMMIVGGYLSKIKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NZ_CP028912.1|WP_002876340.1|1448194_1448626_-|CRISPR-associated-endonuclease-Cas2
MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNVTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF
>NZ_CP028912.1|WP_002819068.1|1448618_1449509_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFVLKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_CP028912.1|WP_002876346.1|1454149_1455139_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNTFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALSSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NZ_CP028912.1|WP_002890120.1|1455199_1455805_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLDFKSISADKIAHKILDENALELEKIFSPFSLKNLLTKEKKIDRKILGKIVFNNKEAKKILENFTHPKIRAKILEQIQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGKM
>NZ_CP028912.1|WP_002876348.1|1455801_1456551_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGVIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFAYKNEELFFEGKVKYCFEANYNFF
>NZ_CP028912.1|WP_002851407.1|1456525_1457257_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase
MKPIIIFFSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_CP028912.1|WP_108614574.1|1457253_1458291_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINIPIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFVLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFEVISFDKFSLGF
>NZ_CP028912.1|WP_002851546.1|1458355_1458805_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM
>NZ_CP028912.1|WP_002855462.1|1458934_1460155_-|glucose-6-phosphate-isomerase
MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNLIDESLQFIQDKEYVKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFNKTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLHQEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKKDEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIALIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELLNAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPGVEVGKLILKNILNS
>NZ_CP028912.1|WP_002851421.1|1460148_1460973_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MLQTCIFPAAGYGTRFLPATKTLPKEMLPILTKPLIHYGVDEALEAGMENMGFVTGRGKRALEDYFDISYELEHQISGTKKEYLLDEIRSLINRCTFTFTRQNQMKGLGDAVLKGRPLVGDEAFGVILADDLCVNEEGLNVMAQMVKIYEKYRCTIIAVMEVPKEQVSNYGVISGNFVEENLIMVNSMIEKPSPDEAPSNLAIIGRYILTPDIFGILENTKAGKNGEIQLTDALLTQATNGMVLAYKFQGKRFDCGSVEGFVEATNYFYEKSKC

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP028912_3	3.1|1447853|30|NZ_CP028912|CRT	1447853-1447882	30	MN530981	Campylobacter phage DA10, complete genome	20527-20556	1	0.967
NZ_CP028912_3	3.4|1447853|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447853-1447883	31	MN530981	Campylobacter phage DA10, complete genome	20526-20556	1	0.968
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	NC_041859	Flavobacterium phage 23T, complete genome	19232-19261	2	0.933
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	KU599889	Flavobacterium phage 1H, complete genome	18331-18360	2	0.933
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	NC_031926	Flavobacterium phage 2A, complete genome	22247-22276	2	0.933
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	MK764450	Flavobacterium phage FPSV-D35, complete genome	1910-1939	2	0.933
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	KC959568	Flavobacterium phage 6H, complete genome	21375-21404	2	0.933
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	MK764437	Flavobacterium phage FPSV-D15, complete genome	39283-39312	2	0.933
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	MK764440	Flavobacterium phage FPSV-F7, complete genome	15976-16005	2	0.933
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	MK764437	Flavobacterium phage FPSV-D15, complete genome	39283-39313	2	0.935
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	MK764440	Flavobacterium phage FPSV-F7, complete genome	15976-16006	2	0.935
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	NC_041859	Flavobacterium phage 23T, complete genome	19231-19261	2	0.935
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	KU599889	Flavobacterium phage 1H, complete genome	18330-18360	2	0.935
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	NC_031926	Flavobacterium phage 2A, complete genome	22246-22276	2	0.935
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	MK764450	Flavobacterium phage FPSV-D35, complete genome	1909-1939	2	0.935
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	KC959568	Flavobacterium phage 6H, complete genome	21374-21404	2	0.935
NZ_CP028912_3	3.1|1447853|30|NZ_CP028912|CRT	1447853-1447882	30	MT774379	CrAssphage cr118_1, complete genome	84169-84198	7	0.767
NZ_CP028912_3	3.1|1447853|30|NZ_CP028912|CRT	1447853-1447882	30	JF974298	Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces	13735-13764	7	0.767
NZ_CP028912_3	3.1|1447853|30|NZ_CP028912|CRT	1447853-1447882	30	MT074146	Bacteroides phage SJC03, complete genome	132713-132742	7	0.767
NZ_CP028912_3	3.4|1447853|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447853-1447883	31	MT774379	CrAssphage cr118_1, complete genome	84169-84199	7	0.774
NZ_CP028912_3	3.4|1447853|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447853-1447883	31	JF974298	Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces	13735-13765	7	0.774
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	AP014494	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces	31892-31921	8	0.733
NZ_CP028912_3	3.3|1447985|30|NZ_CP028912|CRT	1447985-1448014	30	MN693357	Marine virus AFVG_25M390, complete genome	22622-22651	9	0.7
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	AP014494	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces	31892-31922	9	0.71
NZ_CP028912_2	2.1|1338119|34|NZ_CP028912|CRISPRCasFinder	1338119-1338152	34	MH752385	Bacillus phage Ray17, complete genome	8509-8542	10	0.706
NZ_CP028912_3	3.1|1447853|30|NZ_CP028912|CRT	1447853-1447882	30	MN693600	Marine virus AFVG_25M483, complete genome	8561-8590	10	0.667
NZ_CP028912_3	3.1|1447853|30|NZ_CP028912|CRT	1447853-1447882	30	MN693098	Marine virus AFVG_25M144, complete genome	23771-23800	10	0.667
NZ_CP028912_3	3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder	1447985-1448015	31	MN693357	Marine virus AFVG_25M390, complete genome	22621-22651	10	0.677

1. spacer 3.1|1447853|30|NZ_CP028912|CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtggctaagaataaaataagaaacactg	Protospacer
****.*************************

2. spacer 3.4|1447853|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.968

tagtagctaagaataaaataagaaacactgg	CRISPR spacer
tagtggctaagaataaaataagaaacactgg	Protospacer
****.**************************

3. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to NC_041859 (Flavobacterium phage 23T, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

4. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to KU599889 (Flavobacterium phage 1H, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

5. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to NC_031926 (Flavobacterium phage 2A, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

6. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to MK764450 (Flavobacterium phage FPSV-D35, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

7. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to KC959568 (Flavobacterium phage 6H, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

8. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to MK764437 (Flavobacterium phage FPSV-D15, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

9. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to MK764440 (Flavobacterium phage FPSV-F7, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

10. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to MK764437 (Flavobacterium phage FPSV-D15, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

11. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to MK764440 (Flavobacterium phage FPSV-F7, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

12. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to NC_041859 (Flavobacterium phage 23T, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

13. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to KU599889 (Flavobacterium phage 1H, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

14. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to NC_031926 (Flavobacterium phage 2A, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

15. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to MK764450 (Flavobacterium phage FPSV-D35, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

16. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to KC959568 (Flavobacterium phage 6H, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

17. spacer 3.1|1447853|30|NZ_CP028912|CRT matches to MT774379 (CrAssphage cr118_1, complete genome) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
gcatagctaagaatataataagaaaatcta	Protospacer
  .************ *********  **.

18. spacer 3.1|1447853|30|NZ_CP028912|CRT matches to JF974298 (Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtaactaagaataaattaagaggttcag	Protospacer
*****.*********** *****... * *

19. spacer 3.1|1447853|30|NZ_CP028912|CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tattttaaaagaataaaataaaaaacactc	Protospacer
** *    *************.******* 

20. spacer 3.4|1447853|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to MT774379 (CrAssphage cr118_1, complete genome) position: , mismatch: 7, identity: 0.774

tagtagctaagaataaaataagaaacactgg	CRISPR spacer
gcatagctaagaatataataagaaaatctag	Protospacer
  .************ *********  **.*

21. spacer 3.4|1447853|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to JF974298 (Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces) position: , mismatch: 7, identity: 0.774

tagtagctaagaataaaataagaaacactgg	CRISPR spacer
tagtaactaagaataaattaagaggttcagg	Protospacer
*****.*********** *****... * **

22. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to AP014494 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 8, identity: 0.733

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
ttcaaaaggatttttctttgccattgccgc	Protospacer
 *.*********** ****** ****  . 

23. spacer 3.3|1447985|30|NZ_CP028912|CRT matches to MN693357 (Marine virus AFVG_25M390, complete genome) position: , mismatch: 9, identity: 0.7

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
agtaaaaggtttttgctttgctattttact	Protospacer
. ******* *********** ***  .  

24. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to AP014494 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 9, identity: 0.71

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
ttcaaaaggatttttctttgccattgccgca	Protospacer
 *.*********** ****** ****  . .

25. spacer 2.1|1338119|34|NZ_CP028912|CRISPRCasFinder matches to MH752385 (Bacillus phage Ray17, complete genome) position: , mismatch: 10, identity: 0.706

ttttttagctttatactcagccttactcatataa	CRISPR spacer
cttacaagctttatactcagccttattgatcgtt	Protospacer
.** . *******************.* **    

26. spacer 3.1|1447853|30|NZ_CP028912|CRT matches to MN693600 (Marine virus AFVG_25M483, complete genome) position: , mismatch: 10, identity: 0.667

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtagcaaagaataaaataaactgtgaca	Protospacer
******* *************.  ... ..

27. spacer 3.1|1447853|30|NZ_CP028912|CRT matches to MN693098 (Marine virus AFVG_25M144, complete genome) position: , mismatch: 10, identity: 0.667

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtagcaaagaataaaataaactgtgaca	Protospacer
******* *************.  ... ..

28. spacer 3.6|1447985|31|NZ_CP028912|PILER-CR,CRISPRCasFinder matches to MN693357 (Marine virus AFVG_25M390, complete genome) position: , mismatch: 10, identity: 0.677

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
agtaaaaggtttttgctttgctattttactt	Protospacer
. ******* *********** ***  .   

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1354805 : 1363269	9	Synechococcus_phage(57.14%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP028912|1354805:1363269|DBSCAN-SWA
TTTATATTGAAATTAATATTTCATACTCATCAGGCGTTCCGCAAAATATAATTTCATCTAATGAAATTATGTGATATTTTATAATTAAGCCTTTTTTTATAAGATAATTATACATAGGAGCTATATATAATTCTCCCTTGCTAAAATCATTTTCAGTTTTCATTCTATCAAAAATTTCTTTAAAATCTTTTGTTTTTTTAAAATAATAAAGTCCACTACTACAAAGACTTGAAATTCTTTCTTTCTCAGCAGTTTTAATCACATTGTCATTTTCATCAGCTAAAACAAAACTCCATTGCTCTCCATCTGCCTCAAATACCTCTAAATAGCCATCAATGTTACAAAAATCCAAGGTAGTAGGTAAAGAAAAATTTGGCCTAAAGGTATCAATGTTAAAAATTAAAATACTCTCATCATCTTTAATATTTGCCCTTTCTAATCCAAGTCTTACCGTATGAGCTTGACCTAATGTTTCTTGTTCTAATCTTACACTTTCGTAAGATTTTATTCCTAGTTTTTTACATTCTTCTTTTATAAAATTGCTAGTATTCTCAATATCTCTATACACAAAAATAAATTTAAAATTTTTAAAATATTTTTTAAAACTATTTACAGCGTGAAAAAACACACTATTTCCCTTTAAATCAAGCATATATTTAGGTTTATCATAGCCTGCCTTTGCAAAACGACTACTTAGTCCTGCCATAGGAAAGATTATAATCATTTGCTCTCCTTAAAAAATGTATCATAAAGCATAAAAGTATTTGACAAAAAAGCCATTTGTTTTTCTTTAAAATCATTATGCAAAGGTAACATAGATAAAAACAAATGTAAAGTCAAAGCTTTAATATTATCATCTATATCAAACACATCTAAAAATTCTTTCTGGATATCCAAAATATTTACATCTTCTTCTATAAAAAACTCTATATTATCGCTATTAACTTTACACTCAAAAAATCCCGCAATAATAAAATCATAAAGCCCAAAAACAGAATGAACTAATTTTGCAAAATCATATTTTTTATCTCCATAAGGGGTAATTTTTCCATTAAAATCAAACCCTCTTGGATCAAAGGTTTTTATGGCACCAGCTCTAAAATCATACATAATATTTGAAAAACAAAAATCTCCATGTATTAATGAAAATTCATCAATATCGTTCATATAAAAATCAAGCTTATCTACTAAAGTCAAAATACTTGGATAAGATTTTGAATTGATAACAATATTTTTGTGCAAATCAATTCCGCTTTGCATGCTAAATTCTTGCAATCTTTTTAAAGTTTTTTCCTTGCAATTAAAATTTATATCTTTATCATTGCTTTTAAAAGAATGCAACTTATCTAAAAATTCTTTTAAAGACTTAAAAATTCTTTTCCAAACATAATTAGGTAATTTTCCAAAAACATATAATTCTGCTAAAGTATTATTGCAAAGATATTCTATTTCATAACTATCCTCATAAGTTATAACTTTAGGGGTATAGATAAATAGTTCTTTAGGCAAATTATCAAACCAATTAATCTCTGCTTTTATTTTTTCTTGCCAAGAAGAAGACTTTTTTATATAGCCATTTGAAATATCTATATTGTTAAAATTTCTTTGCGTGCTTACAGCTTTTTTAGAGTGGAAATAACTTGTTATAAAACCAAAATCAAGCCAAGTATCATTTTTTATAATATCAAAAGTATAAGCTTTAGAATAAGCTTTCATACCATCCACGAAAGAATAACTACTTTCAACTATACATTTTATCAAAAACTGAGGATGAGAAAAACCATAAGCTCCTGCTAAAATCAAATCATCTTCTATTGTTTTTAACGGTGTATGAAATTCATTATCCAAATAAGCCCAATCGTAATTTTCCTTAACTTTTGCAACCTGTAAAGAGTTTTCTTTGAATACAAGTTCTTTGAAAAAAGTATCCCCGTGTAAAATATAAAGTTTTTCATCAAAAGCACAACAAACATTTAAACAGTAAACCACAGATTCACCTAAAGATAAATTATTTGGCACAAATAAAATTTCAACATTAAGTTCTTTTAATTTTTTCTCATCAAATTTACTTAACTTAAAATCGCTGGGTAAAGATAAAAAAACTTTTTGATTACAATTTTTAAAAAGCTCTATTTGATATTCATACAATCTTTTATTACCAAGCGGTAAAAAAGATGGAGGAATTTTTCCAAATTCTAAAGTAAAATCAGAAGATGAATATTTTGCAGAAGTTATGAGTATCATTTATTACCACCATCTTTATGAGGGTTTTCTTTTTTTAAAAGCTCTTTAATTTGCTCATAATTTAAACTTATAAATTCAGACGGACGAATGGCTTTATCATCAACATAAAATCCATCATACCCACACCAAGGTTTACCTATGATTATTTCATCATACGGCACATCATATTTTTGAAGCCAAGTAGTAATTGTAGGTAAGGTATGAAATTTAATTTTTTCAAGATCACCATCAAATGTACGCATGTTACGACTTGTAAAAATATTGATTTTAAAGCCTTGTTTTTTATACTCTTTTAAAGTTTTGATTAAAATAATATTTGGTTTTTTATCAATATAATCAACATGTTCTTCATCAATTGTTAAAGTTCCATCTAAATCAATAAGTAATGTTTTCATTGAATAAGCATAACATAAATTTTTATTCAAATTTCTTAATTATTTCTTTTTTGATTTTATTTTATTTTGATTCAAAGCAAACAAATCAAAAAACAAAAATTTAACATACCCACCTTTATACCAATTTTTACTTGCTTGTATTAAAGCTTCACCTAATTTGTATGAAAAATAATTCTTAATTTTTAAAGCCTCTTCATAATCAGAACAATCTTCCAAAGGAGGTAAAACTAACTCTGGATTTGTTTTTCTTCTTTGAAGTTCTTTTTGATGCTTATATCGTATATAGAATAAAACAAAAGGCATTTTTATATACCCCAATATACTTTTTGAATTATCTATCATAGCTTGACCTAATTTATATGCTAAGTGATTTTGTATTTTTATTTTTGCCAAATTATTGCGATTTTTAGAAATAATTTTATATTTTTTAGCAATCAAATCAAAAAAATCAATAATTTTACCAATCTGAACTTCATTAAATATCTTATTTTTTTTAATATGCCAAATATCTTTATTTAATTCATTCTTTACATCTGGAAAACTTATATTATCAAATAAAAAATGATTTAGATGTGAAAATTTTATATTCATCTTTACCACTTTTAATTTTAAAAAATCTGTCCATTGACTTAAAACATAATGCGATAAAAATCCATTTCCTGGACTCATGCAAGTTTGAGGGAAATGTTTAAGATATGTATTAAAATAAGGATTTTCTTTATTTTCTTTAGCATATACCCAAGTTTTCATATAAATTTCCATTGCACTTCTTCTACCTATTTGCAAACTTCCATCTAGACCACAAAAATACCTTGCATCATAAATATCATTTAACTCTAATAAATGCAAGTCTTCAATTTTTATATCATTCTTTTCTATGATATAATCAGGTCTAACACGCACAATAAAATCATATTTAAAATTGTTTTGCTTTTCATATTCTTCCATTGCCTTATACACTTGGTAAATTCCATAATATATTTTAGAATCATTTTTTAATTCTCCCAAACGATTAACAACTTTAGAATACGATTCCAAAATCACTTTTTTTATTTTATTATCTAAAACTAGTACATCTTTGATAAAAATTTTTTTATTAAATTCTCTTGAAATTACACCAAAAACATTTGGAAATTTTTTAGAAAAATCGATATTAGACATTATAAGTTCACGAGGGCATTCATTAAGCATAGGGTAAAAAAATCTTCTAATCCATCCCGCACCATTTCCACCAGAACCTGGCCACAAACTTTCCACATCCCAAGAATATATAAAAACATCAATATTGCCAAGATGAGAGAAAGAATCAATTAACGCTTTAATACTATCACGCCAACCAGGTCTTAGCTGCCCATTTAAACATAAAGCTATCCTACTTCCTGAATAAGATTTTTTTGATATAAAGTATCTTCCTGCAATAAATCTTAATTTATCATAATACAGTCTTCCACCTAAGGTATTTAAGAAATTATTATATATGATTTCTAGCATGATAAAATAAATTCCACCTTTAAAAAAAATGTCACTTGAATTAATATAAAAAAAATCTATTGAATTTTTTAAAAAAAAAGATTGCAAGATTAAATCTTGAGATTTTTTTACTTCATTTAAAATTTTTAAAAAAAAATTAAAATCCCCAAAATCAACAACATCCAAATGGGAAGATAAAAAACTCATATATGAATTTTTATAATTTCCAAGTAAAAAATTTTCATTTACAGTTTTATCTTTTAAGCATGTGTGTATAAAATCATATAAATCTTTAGAATCAGTATTTAAAAATGATGATAATCGATCAATGTAATCAATATTTTCTAAAAAAAAATTATATCGCCCCAATTTATACATCAACAATAAATGCTCATCGGATAAATTTTCATTATTTAAAAAATTATCAAGAAACTCATAACTCCAATTATCTATAGCTTTTTTAACTAAAATATCTGCATTATTTAACATTTTATAATCTCAATCTTATTATTTATATTTTCAATAATATCTTTCTCTATTTCATCATTATAAATACCTGCATTTAAAATTACTAAAGCATTGCTATCGTTTATTAGAATTTTAGGTGAGCGAACTATAAATTTTGTACCATAAAGCCGTTTTTTCTGTTTATTTAGATCATTATCCAATATACAAACAATCTTTAAAGTATCTAATCCACTATATATTAAGTTTTGACTAAATAAATGTGCTCCAAATAAATAAACCTTCTTTGGAGTTTGCTTAATGTAAGAGTTAATATACTCAACTTTATTTTTATAAAACCTTAACATATTCCCAAAATCTACTTTATTTTCAAGGTATTTATTTTCCAGAGTAATTTTTACAGATCGAACATCTTTTTTTGCCAAATAAAATATGGAATGTTCCTTAAAATATTTCTTGACAATAATTGTAAAATTATTATTTCCCAATATATAATCAACTACATTTTCATCTAATAAAATAGTATGTTCAAAAAATAAACAATTGCTATATTTATTTTTTAGCCACTTGGACATATTGGGTATTGAAAATATCATATATCCTTTATCGTTATTTAAAAAACTTGATATTTCAGAAAAAAATTCATTTGGATCATATACATGTTCAAGAACATGAGAATGTATAATTGTATCATACTGTTTATTGTTGCATATATCTTTACTAAAAAATCCATCGATATAATTTACATTTTCAAACTTATTTTCAATATTTGGTTCTACTATAGTCCAATTAACATTATCCATTTCTAAAAAAAATTGTGATAATTTTCCATGCCCACCACCAATTTCTAATATATTTTTTGGTCTAATTTGAAAAATAAATTTTGCAAATTCTTTATGATGCTCATCCCATATTTTTCCAATATTACCAGCATAATGTCCATTTTTATACAAGATATCCAAAGGAATTAATTTATTTAAAAATAAAACACCACTATCCCGACAAACTGCAAATTGTTCTTCACAAATAATATCTTTTTTTTGATCTTGCTCAATACAACCACAAAATAATGGAAATTGTCTTGAATTAATTATTTCTATATTTTTACTATATGTAATAGGGCATTGATCTCTAGTAATTAAACTTAATTCATCAATTTCTTTATATTTTTTATATTTTTCCAAATCTTCAGGTGTTCCAATCCCATGCATTTGCTTATCCTCTATATTATAAACACCTATTTTAGCACCATTTTTTATAGCATAATTATACACTGGACAAGTATAAAATTCATTATTAACCCTATCATTTTCTATAATCATATCTATAGCACTTTCAACAAATATTTTTCCCTTATTAAAAAGATAAATCCCAACTGTAGCAAATTCGCTAATAGCTTCTTTTTCTTTAACTTCTACTACTAAATCACCTTTCAATCTTACAAACGACCATTTTGAATTTTTTTCTTTATCAATAAAAGTCAATATCGAACCATCCAAACCTCGTTTGAAACCATCATTAATAAAATCAGTTATATTAACATCAACAATTTGATCAGAATTTGCTATCATTAAGGGTGTATCATTATTAATATATTTTCTTGCATAAAGCACAGTACAAGCTGTTCCTTGTGTAAGCTTATCAATAGCTATAAATTCAACATTAAAATTATTTTTGATTTCATCAACTAGCTTTTTTTCTTTAATCAAATGTTCTTTTCTTGCTATTAAAATATATCTTGCATCTTTATATCTTAAATTTTCAAGCACTCTAACTACCATTGGCTTACCCAAAACATCCATAAAAGGCTTTGGTTTATCAAAACCAGCCTTTGCAAAACGACTTCCAAGTCCAGCCATAGGAATCACTATATTCATTGACATTCTCCCAAATATTTATCATTATTAGTCCCTGGAAGTTTTACGACAACATTTATTGCATCTTCTAAGGCTTCAAAATCTGTGACTTCACCTGGATTAATCATTACTATATCTCCTTTAGAATATATCTTATCATTCATTCTTACTTTACCGCTAATAATAACAGTAATTTCGGTTGCGATTTTATGATGATGCTTTTCTTCAGTATCACCTTTTTTATATTCTTTCACGCCAACTTCCACATCATTAGTTTTAAAAACACTTGGATCGAAATTTCCTACAAACCAACCACGAATCATTTCATCTAATTTATAATTTTTCACAATCAACCTTTCGGAATATCCAAATAAGCACGTAACTCAACAATTTTTTCATCATGCCATTCTATAATATCCACACCTTCAAGTCTGATATCATCAAGTATTAAAATAAATTCTATAAAAGTTATATTTTTATCTTGAAAAATATTTTTAGCACTAAAGCTTAGTTTATTACAATTTTTAAAAATATTTTCAATAGCTTTTAAGCATTCTTCTTTGCCTTCTATTCTTTTTACAACCGGATCTTCTAAAACAAAATTCTCATTTAACAAATTTGCTACTTCATTGATATCTTTTTTATTAAAAGCACTGATATATTTTTCAGTTAATTTTTTAAGCATTTTTAATCCTTTCATATTCATTAATTTTCGCATGAGAATAAAAAGTAAAATAACGATCTTTATCAATTGAAATATTTATAATTTTCTTATCTTGTAAAATTAATTCATTTAATGTTGAAGCAATAAAATATTTTCCTTCGTAATTAACATCTTTTTTAATCATATCAAAAGCTGATTTTACAAAAAAATCAGCCTTATTAAAATAATAAAATCCCGCTATTGCATTTTTACTTACAGGTTTTTTTTCAAAAGCTTCTAAAACAAAATTATTTTCATCGCATTTTACATAAGCCCATCTTGGATGAACACTCTCAAAACTCAAAACACCCGCATCATTTAAAGATAATTCTGAAATAACTTCATTTAAATCATACTCAAAAATTTGATCCATATTAACAATAAGCAAAGAATCATTTAAATTAATCTCATCAATAGCCATCAAAACAGAACAAACCATACCTTGTGTTTCATTTTTAAGAATGATAATTTTGCTTTGATTATTAGTTAAAACATTAATTGCATCATCTAAATGATAACGCTTTACATCTTCTTCTTTAAGTATAAAAATAAAACGTTTATTCTTGACATTTTCATAATTTTTAACAAAATGTTCTAACATAGTTTTTCCACAAATTTCGATAAATGGCTTTGGAAAACCGTCTTTTTCATTATCAAAAAAATAACTTTTACCCGCAATAGGAACCACTATATTTAACATTTCAATTCCTCTTCAAATTTACAAATATGATTTTTAATATTTTCATAATTTACTTCACTAACTTCATCTACAATCATCACATTAGCCCCACTTGCCCTAGCTGCTTTTATACCATTTTCATTATCTTCTACTATCATGCATTCTTTAGGATTTAGCTTTAATCTTTCTATAGCTTTGATATACATTTCAGGGTCAGGTTTTCCTTTTTTTACATCTTCATTGGAAATATAAAAATCTAAATAATTTTCAAGAGCTGATTTTTTCATCATTACTTTAATGCTATTGCGTATAGAATTAGAACAAACTGCCATTTTATAACCTTCAAATTTTAGCTTTGATAAAGCATATTCATGATGGAACCTAGGTTTGCATAAACTATAAACTATTTCCATAGTGTATTGCTGTTTTAATTCATTTATAAAAGAATGTAGCGATTTAGGCAACCCTCTTTCCAATGAAAGCATTTTTAATTTATCCTTAGTTGGCAAGCCATCAAAAGTTGTTAAGTGCTCATATCTAGTAATTTCCATGCCAAAAAGTTTTAAAGCTCTATTTAAAGCTTCATAATGCCAATCTTTAGCTTCAATCAAAACTCCATCCATATCGAAAATAATGGCTTTTATCTTAGTCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP028912|1354805:1363269|1357044_1357443_-|WP_014516848.1|DBSCAN-SWA
MKTLLIDLDGTLTIDEEHVDYIDKKPNIILIKTLKEYKKQGFKINIFTSRNMRTFDGDLEKIKFHTLPTITTWLQKYDVPYDEIIIGKPWCGYDGFYVDDKAIRPSEFISLNYEQIKELLKKENPHKDGGNK
>NZ_CP028912|1354805:1363269|1361911_1362637_-|WP_002903928.1|DBSCAN-SWA
MLNIVVPIAGKSYFFDNEKDGFPKPFIEICGKTMLEHFVKNYENVKNKRFIFILKEEDVKRYHLDDAINVLTNNQSKIIILKNETQGMVCSVLMAIDEINLNDSLLIVNMDQIFEYDLNEVISELSLNDAGVLSFESVHPRWAYVKCDENNFVLEAFEKKPVSKNAIAGFYYFNKADFFVKSAFDMIKKDVNYEGKYFIASTLNELILQDKKIINISIDKDRYFTFYSHAKINEYERIKNA
>NZ_CP028912|1354805:1363269|1361583_1361919_-|WP_014516850.1|DBSCAN-SWA
MLKKLTEKYISAFNKKDINEVANLLNENFVLEDPVVKRIEGKEECLKAIENIFKNCNKLSFSAKNIFQDKNITFIEFILILDDIRLEGVDIIEWHDEKIVELRAYLDIPKG
>NZ_CP028912|1354805:1363269|1354805_1355528_-|WP_002903944.1|DBSCAN-SWA
MIIIFPMAGLSSRFAKAGYDKPKYMLDLKGNSVFFHAVNSFKKYFKNFKFIFVYRDIENTSNFIKEECKKLGIKSYESVRLEQETLGQAHTVRLGLERANIKDDESILIFNIDTFRPNFSLPTTLDFCNIDGYLEVFEADGEQWSFVLADENDNVIKTAEKERISSLCSSGLYYFKKTKDFKEIFDRMKTENDFSKGELYIAPMYNYLIKKGLIIKYHIISLDEIIFCGTPDEYEILISI
>NZ_CP028912|1354805:1363269|1362630_1363269_-|WP_002826458.1|DBSCAN-SWA
MTKIKAIIFDMDGVLIEAKDWHYEALNRALKLFGMEITRYEHLTTFDGLPTKDKLKMLSLERGLPKSLHSFINELKQQYTMEIVYSLCKPRFHHEYALSKLKFEGYKMAVCSNSIRNSIKVMMKKSALENYLDFYISNEDVKKGKPDPEMYIKAIERLKLNPKECMIVEDNENGIKAARASGANVMIVDEVSEVNYENIKNHICKFEEELKC
>NZ_CP028912|1354805:1363269|1361251_1361581_-|WP_002903930.1|DBSCAN-SWA
MKNYKLDEMIRGWFVGNFDPSVFKTNDVEVGVKEYKKGDTEEKHHHKIATEITVIISGKVRMNDKIYSKGDIVMINPGEVTDFEALEDAINVVVKLPGTNNDKYLGECQ
>NZ_CP028912|1354805:1363269|1357482_1359402_-|WP_002903935.1|DBSCAN-SWA
MLNNADILVKKAIDNWSYEFLDNFLNNENLSDEHLLLMYKLGRYNFFLENIDYIDRLSSFLNTDSKDLYDFIHTCLKDKTVNENFLLGNYKNSYMSFLSSHLDVVDFGDFNFFLKILNEVKKSQDLILQSFFLKNSIDFFYINSSDIFFKGGIYFIMLEIIYNNFLNTLGGRLYYDKLRFIAGRYFISKKSYSGSRIALCLNGQLRPGWRDSIKALIDSFSHLGNIDVFIYSWDVESLWPGSGGNGAGWIRRFFYPMLNECPRELIMSNIDFSKKFPNVFGVISREFNKKIFIKDVLVLDNKIKKVILESYSKVVNRLGELKNDSKIYYGIYQVYKAMEEYEKQNNFKYDFIVRVRPDYIIEKNDIKIEDLHLLELNDIYDARYFCGLDGSLQIGRRSAMEIYMKTWVYAKENKENPYFNTYLKHFPQTCMSPGNGFLSHYVLSQWTDFLKLKVVKMNIKFSHLNHFLFDNISFPDVKNELNKDIWHIKKNKIFNEVQIGKIIDFFDLIAKKYKIISKNRNNLAKIKIQNHLAYKLGQAMIDNSKSILGYIKMPFVLFYIRYKHQKELQRRKTNPELVLPPLEDCSDYEEALKIKNYFSYKLGEALIQASKNWYKGGYVKFLFFDLFALNQNKIKSKKK
>NZ_CP028912|1354805:1363269|1359395_1361255_-|WP_002903931.1|DBSCAN-SWA
MNIVIPMAGLGSRFAKAGFDKPKPFMDVLGKPMVVRVLENLRYKDARYILIARKEHLIKEKKLVDEIKNNFNVEFIAIDKLTQGTACTVLYARKYINNDTPLMIANSDQIVDVNITDFINDGFKRGLDGSILTFIDKEKNSKWSFVRLKGDLVVEVKEKEAISEFATVGIYLFNKGKIFVESAIDMIIENDRVNNEFYTCPVYNYAIKNGAKIGVYNIEDKQMHGIGTPEDLEKYKKYKEIDELSLITRDQCPITYSKNIEIINSRQFPLFCGCIEQDQKKDIICEEQFAVCRDSGVLFLNKLIPLDILYKNGHYAGNIGKIWDEHHKEFAKFIFQIRPKNILEIGGGHGKLSQFFLEMDNVNWTIVEPNIENKFENVNYIDGFFSKDICNNKQYDTIIHSHVLEHVYDPNEFFSEISSFLNNDKGYMIFSIPNMSKWLKNKYSNCLFFEHTILLDENVVDYILGNNNFTIIVKKYFKEHSIFYLAKKDVRSVKITLENKYLENKVDFGNMLRFYKNKVEYINSYIKQTPKKVYLFGAHLFSQNLIYSGLDTLKIVCILDNDLNKQKKRLYGTKFIVRSPKILINDSNALVILNAGIYNDEIEKDIIENINNKIEIIKC
>NZ_CP028912|1354805:1363269|1355524_1357048_-|WP_002903942.1|DBSCAN-SWA
MILITSAKYSSSDFTLEFGKIPPSFLPLGNKRLYEYQIELFKNCNQKVFLSLPSDFKLSKFDEKKLKELNVEILFVPNNLSLGESVVYCLNVCCAFDEKLYILHGDTFFKELVFKENSLQVAKVKENYDWAYLDNEFHTPLKTIEDDLILAGAYGFSHPQFLIKCIVESSYSFVDGMKAYSKAYTFDIIKNDTWLDFGFITSYFHSKKAVSTQRNFNNIDISNGYIKKSSSWQEKIKAEINWFDNLPKELFIYTPKVITYEDSYEIEYLCNNTLAELYVFGKLPNYVWKRIFKSLKEFLDKLHSFKSNDKDINFNCKEKTLKRLQEFSMQSGIDLHKNIVINSKSYPSILTLVDKLDFYMNDIDEFSLIHGDFCFSNIMYDFRAGAIKTFDPRGFDFNGKITPYGDKKYDFAKLVHSVFGLYDFIIAGFFECKVNSDNIEFFIEEDVNILDIQKEFLDVFDIDDNIKALTLHLFLSMLPLHNDFKEKQMAFLSNTFMLYDTFFKESK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002903944.1|1354805_1355528_-	capsular polysaccharide biosynthesis protein	E3SJ89	Synechococcus_phage	2.9e-15	26.7
WP_002903942.1|1355524_1357048_-	hypothetical protein	B2ZYD9	Ralstonia_phage	5.3e-35	27.5
WP_014516848.1|1357044_1357443_-	capsule biosynthesis phosphatase	A0A2K9L0P7	Tupanvirus	1.7e-09	41.0
WP_002903935.1|1357482_1359402_-	hypothetical protein	E3SJ94	Synechococcus_phage	2.9e-06	27.8
WP_002903931.1|1359395_1361255_-	methyltransferase domain-containing protein	M4QRS6	Synechococcus_phage	3.0e-56	40.2
WP_002903930.1|1361251_1361581_-	hypothetical protein	NA	NA	NA	NA
WP_014516850.1|1361583_1361919_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_002903928.1|1361911_1362637_-	NTP transferase domain-containing protein	A0A1D8KNV9	Synechococcus_phage	9.2e-30	33.6
WP_002826458.1|1362630_1363269_-	HAD family phosphatase	M1I080	Acanthocystis_turfacea_Chlorella_virus	2.2e-35	43.3