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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP028927 Pasteurella multocida strain 9N chromosome, complete genome 5 crisprs cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DEDDh,DinG,cas3,cas2,cas9,csa3 0 40 3 0

Results visualization

1. NZ_CP028927
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028927_1 362107-364236 TypeI-F NA
35 spacers
cas6f,cas7f,cas5f,cas8f,cas1,cas3-cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028927_2 1321395-1321628 TypeII NA
3 spacers
cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028927_3 2050456-2050551 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028927_4 2128875-2130706 Unclear I-F
30 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028927_5 2130830-2130917 Unclear I-F
1 spacers
cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP028927_1 1.2|362195|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362195-362226 32 MH238466 Pasteurella phage AFS-2018a, complete genome 21374-21405 0 1.0
NZ_CP028927_1 1.34|364117|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 364117-364148 32 MH238466 Pasteurella phage AFS-2018a, complete genome 17861-17892 0 1.0
NZ_CP028927_4 4.21|2130106|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130106-2130137 32 MH238466 Pasteurella phage AFS-2018a, complete genome 9703-9734 0 1.0
NZ_CP028927_4 4.28|2130526|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130526-2130557 32 MH238467 Pasteurella phage Pm86, complete genome 1513-1544 0 1.0
NZ_CP028927_4 4.29|2130586|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130586-2130617 32 MH238467 Pasteurella phage Pm86, complete genome 10698-10729 0 1.0
NZ_CP028927_1 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362855-362886 32 MH238467 Pasteurella phage Pm86, complete genome 52749-52780 1 0.969
NZ_CP028927_1 1.33|364057|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 364057-364088 32 NC_008193 Pasteurella phage F108, complete genome 13614-13645 2 0.938
NZ_CP028927_1 1.33|364057|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 364057-364088 32 DQ114220 Bacteriophage F108, complete genome 13614-13645 2 0.938
NZ_CP028927_5 5.1|2130858|32|NZ_CP028927|CRISPRCasFinder 2130858-2130889 32 MH238467 Pasteurella phage Pm86, complete genome 20652-20683 2 0.938
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NC_014389 Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence 316845-316876 4 0.875
NZ_CP028927_1 1.8|362555|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362555-362586 32 NZ_CP036260 Sporomusa termitida strain DSM 4440 plasmid pSPTER, complete sequence 1909-1940 6 0.812
NZ_CP028927_1 1.11|362735|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362735-362766 32 CP006880 Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence 1629627-1629658 6 0.812
NZ_CP028927_1 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362855-362886 32 NC_017327 Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence 1290107-1290138 6 0.812
NZ_CP028927_1 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362855-362886 32 NZ_CP021217 Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence 895262-895293 6 0.812
NZ_CP028927_1 1.18|363155|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363155-363186 32 MT074146 Bacteroides phage SJC03, complete genome 157958-157989 6 0.812
NZ_CP028927_1 1.11|362735|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362735-362766 32 NZ_CP017244 Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence 665654-665685 7 0.781
NZ_CP028927_1 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362855-362886 32 NZ_CP024582 Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence 363425-363456 7 0.781
NZ_CP028927_1 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362855-362886 32 NZ_CP025188 Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence 63877-63908 7 0.781
NZ_CP028927_1 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362855-362886 32 NZ_CP015882 Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence 505753-505784 7 0.781
NZ_CP028927_1 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362855-362886 32 NZ_CP030264 Ensifer adhaerens strain Corn53 plasmid AB, complete sequence 459640-459671 7 0.781
NZ_CP028927_1 1.34|364117|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 364117-364148 32 NC_011971 Bacillus cereus Q1 plasmid pBc53, complete sequence 14381-14412 7 0.781
NZ_CP028927_2 2.2|1321497|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 1321497-1321526 30 HQ633071 Synechococcus phage S-SKS1 genomic sequence 9255-9284 7 0.767
NZ_CP028927_4 4.2|2128963|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128963-2128994 32 MN694714 Marine virus AFVG_250M691, complete genome 28372-28403 7 0.781
NZ_CP028927_4 4.17|2129865|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129865-2129896 32 NZ_CP032327 Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence 42621-42652 7 0.781
NZ_CP028927_1 1.2|362195|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362195-362226 32 MN694515 Marine virus AFVG_250M511, complete genome 40847-40878 8 0.75
NZ_CP028927_1 1.7|362495|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362495-362526 32 MN693374 Marine virus AFVG_25M38, complete genome 36497-36528 8 0.75
NZ_CP028927_1 1.11|362735|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362735-362766 32 NZ_CP017105 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence 1490729-1490760 8 0.75
NZ_CP028927_1 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362855-362886 32 NC_017959 Tistrella mobilis KA081020-065 plasmid pTM4, complete sequence 10101-10132 8 0.75
NZ_CP028927_1 1.16|363035|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363035-363066 32 NZ_AP021883 Sulfuriferula nivalis strain SGTM plasmid SGTM_pl2, complete sequence 980-1011 8 0.75
NZ_CP028927_1 1.21|363335|33|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363335-363367 33 MG696114 Proteus phage phiP4-3, complete genome 84536-84568 8 0.758
NZ_CP028927_1 1.22|363396|33|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363396-363428 33 NC_017232 Borreliella afzelii PKo plasmid lp17, complete sequence 24537-24569 8 0.758
NZ_CP028927_1 1.24|363517|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363517-363548 32 MT362618 Microcystis phage MaeS, complete genome 76625-76656 8 0.75
NZ_CP028927_1 1.26|363637|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363637-363668 32 HQ634193 Cyanophage P-RSM6 genomic sequence 182023-182054 8 0.75
NZ_CP028927_1 1.28|363757|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363757-363788 32 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 1151730-1151761 8 0.75
NZ_CP028927_1 1.29|363817|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363817-363848 32 MH844558 Exiguobacterium phage vB_EauM-23, complete genome 13749-13780 8 0.75
NZ_CP028927_2 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 1321431-1321460 30 NC_018689 Bacillus thuringiensis MC28 plasmid pMC429, complete sequence 2050-2079 8 0.733
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NZ_CP031267 Staphylococcus warneri strain 16A plasmid unnamed3 59252-59283 8 0.75
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NZ_CP017464 Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence 109220-109251 8 0.75
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 AP013454 Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S33-C36 13289-13320 8 0.75
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 MN694775 Marine virus AFVG_250M170, complete genome 26904-26935 8 0.75
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 MN694117 Marine virus AFVG_250M169, complete genome 26889-26920 8 0.75
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 MN693887 Marine virus AFVG_250M171, complete genome 26891-26922 8 0.75
NZ_CP028927_4 4.2|2128963|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128963-2128994 32 MT708547 Klebsiella phage Muenster, complete genome 102794-102825 8 0.75
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 MT774384 CrAssphage cr8_1, complete genome 45997-46029 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NC_006578 [Bacillus thuringiensis] serovar konkukian str. 97-27 plasmid pBT9727, complete sequence 16064-16096 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP018936 Bacillus cereus strain JEM-2 plasmid unnamed1, complete sequence 58519-58551 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP053978 Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed2, complete sequence 34631-34663 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP009333 Bacillus thuringiensis strain HD1011 plasmid 4, complete sequence 48446-48478 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP018932 Bacillus cereus strain ISSFR-3F plasmid unnamed, complete sequence 49227-49259 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP053937 Bacillus thuringiensis strain FDAARGOS_792 plasmid unnamed, complete sequence 17494-17526 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP018934 Bacillus cereus strain ISSFR-9F plasmid unnamed1, complete sequence 11500-11532 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP018934 Bacillus cereus strain ISSFR-9F plasmid unnamed1, complete sequence 87413-87445 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP034684 Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence 105193-105225 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NC_018688 Bacillus thuringiensis MC28 plasmid pMC319, complete sequence 235610-235642 8 0.758
NZ_CP028927_4 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129324-2129356 33 NZ_CP010087 Bacillus thuringiensis strain 97-27 plasmid unnamed, complete sequence 2559-2591 8 0.758
NZ_CP028927_4 4.15|2129745|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129745-2129776 32 MK448851 Streptococcus phage Javan14, complete genome 39365-39396 8 0.75
NZ_CP028927_4 4.23|2130226|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130226-2130257 32 MH706966 Enterobacteria phage mEp021, complete genome 19621-19652 8 0.75
NZ_CP028927_4 4.30|2130646|32|NZ_CP028927|CRISPRCasFinder,CRT 2130646-2130677 32 JF713456 Vibrio phage 1, complete genome 22302-22333 8 0.75
NZ_CP028927_5 5.1|2130858|32|NZ_CP028927|CRISPRCasFinder 2130858-2130889 32 NC_019699 Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence 173385-173416 8 0.75
NZ_CP028927_1 1.5|362375|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362375-362406 32 NC_047926 Lactobacillus phage Semele, complete genome 18973-19004 9 0.719
NZ_CP028927_1 1.5|362375|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362375-362406 32 MG557979 Lactobacillus phage Lpa804, complete genome 129270-129301 9 0.719
NZ_CP028927_1 1.9|362615|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362615-362646 32 MN692980 Marine virus AFVG_117M21, complete genome 35702-35733 9 0.719
NZ_CP028927_1 1.21|363335|33|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363335-363367 33 NC_017483 Lactococcus lactis subsp. lactis CV56 plasmid pCV56A, complete sequence 2892-2924 9 0.727
NZ_CP028927_1 1.23|363457|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363457-363488 32 NZ_CP025613 Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence 434545-434576 9 0.719
NZ_CP028927_2 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 1321431-1321460 30 NZ_CP012100 Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence 11975-12004 9 0.7
NZ_CP028927_2 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 1321431-1321460 30 NZ_CP021876 Enterococcus wangshanyuanii strain MN05 plasmid unnamed3 105880-105909 9 0.7
NZ_CP028927_2 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 1321431-1321460 30 NZ_CP021876 Enterococcus wangshanyuanii strain MN05 plasmid unnamed3 195035-195064 9 0.7
NZ_CP028927_2 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 1321431-1321460 30 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 36942-36971 9 0.7
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NZ_CP040462 Enterococcus sp. M190262 plasmid pM190262, complete sequence 23839-23870 9 0.719
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NZ_CP013139 Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence 252857-252888 9 0.719
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NZ_CP010111 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence 180721-180752 9 0.719
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NZ_CP051211 Acinetobacter sp. NEB149 plasmid pMsp22, complete sequence 14996-15027 9 0.719
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NZ_CP032287 Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.2, complete sequence 13066-13097 9 0.719
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 MK449008 Streptococcus phage Javan84, complete genome 5577-5608 9 0.719
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 MK448832 Streptococcus phage Javan85, complete genome 5577-5608 9 0.719
NZ_CP028927_4 4.2|2128963|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128963-2128994 32 MN693165 Marine virus AFVG_25M308, complete genome 11350-11381 9 0.719
NZ_CP028927_4 4.15|2129745|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129745-2129776 32 MN693124 Marine virus AFVG_25M44, complete genome 21527-21558 9 0.719
NZ_CP028927_4 4.24|2130286|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130286-2130317 32 NC_019699 Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence 81428-81459 9 0.719
NZ_CP028927_1 1.9|362615|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362615-362646 32 NZ_CP012100 Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence 344161-344192 10 0.688
NZ_CP028927_1 1.18|363155|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363155-363186 32 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 121296-121327 10 0.688
NZ_CP028927_1 1.18|363155|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363155-363186 32 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 125267-125298 10 0.688
NZ_CP028927_1 1.26|363637|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363637-363668 32 AP014715 Edwardsiella phage PEi26 DNA, complete sequence 124307-124338 10 0.688
NZ_CP028927_1 1.26|363637|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 363637-363668 32 NC_028683 Edwardsiella phage PEi20 DNA, complete sequence 124239-124270 10 0.688
NZ_CP028927_4 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2128903-2128934 32 NZ_LR134427 Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 18 18230-18261 10 0.688
NZ_CP028927_4 4.4|2129084|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129084-2129115 32 AJ298298 Bacteriophage P27 complete genome 3197-3228 10 0.688
NZ_CP028927_4 4.4|2129084|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129084-2129115 32 NC_003356 Enterobacteria phage phiP27, complete genome 3197-3228 10 0.688
NZ_CP028927_4 4.9|2129385|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129385-2129416 32 NZ_CP013044 Clostridium perfringens strain JP55 plasmid pJFP55J, complete sequence 27588-27619 10 0.688
NZ_CP028927_4 4.13|2129625|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129625-2129656 32 NZ_CP032091 Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence 526544-526575 10 0.688
NZ_CP028927_4 4.14|2129685|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2129685-2129716 32 MN694570 Marine virus AFVG_250M650, complete genome 27182-27213 10 0.688
NZ_CP028927_4 4.20|2130046|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130046-2130077 32 MN693034 Marine virus AFVG_117M74, complete genome 63682-63713 10 0.688
NZ_CP028927_4 4.24|2130286|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130286-2130317 32 NC_016615 Arthrobacter rhombi strain PRH1 plasmid pPRH, complete sequence 1551-1582 10 0.688
NZ_CP028927_1 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362675-362706 32 MK448946 Streptococcus phage Javan456, complete genome 3803-3834 11 0.656
NZ_CP028927_1 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362675-362706 32 MK448970 Streptococcus phage Javan516, complete genome 4330-4361 11 0.656
NZ_CP028927_1 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362675-362706 32 NC_028700 Streptococcus phage T12, complete genome 3848-3879 11 0.656
NZ_CP028927_1 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362675-362706 32 MK448790 Streptococcus phage Javan515, complete genome 3979-4010 11 0.656
NZ_CP028927_1 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362675-362706 32 MK448854 Streptococcus phage Javan146, complete genome 4232-4263 11 0.656
NZ_CP028927_1 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362675-362706 32 MK448957 Streptococcus phage Javan484, complete genome 3897-3928 11 0.656
NZ_CP028927_1 1.14|362915|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR 362915-362946 32 MN694362 Marine virus AFVG_250M129, complete genome 26489-26520 11 0.656
NZ_CP028927_4 4.25|2130346|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130346-2130377 32 CP053415 Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence 34226-34257 11 0.656
NZ_CP028927_4 4.25|2130346|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130346-2130377 32 CP053327 Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence 42551-42582 11 0.656
NZ_CP028927_4 4.25|2130346|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT 2130346-2130377 32 NZ_CP030289 Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence 159-190 11 0.656

1. spacer 1.2|362195|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 0, identity: 1.0 

caactgtcacgcatattatcaattttgaaacc	CRISPR spacer
caactgtcacgcatattatcaattttgaaacc	Protospacer
********************************

2. spacer 1.34|364117|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 0, identity: 1.0 

ttccgcatattcaaccgtattatcttcagttg	CRISPR spacer
ttccgcatattcaaccgtattatcttcagttg	Protospacer
********************************

3. spacer 4.21|2130106|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 0, identity: 1.0 

gttggttgtggcggagcagtggataacgatgt	CRISPR spacer
gttggttgtggcggagcagtggataacgatgt	Protospacer
********************************

4. spacer 4.28|2130526|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 0, identity: 1.0 

accagaagaactgtatagcgaaatgctttatt	CRISPR spacer
accagaagaactgtatagcgaaatgctttatt	Protospacer
********************************

5. spacer 4.29|2130586|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 0, identity: 1.0 

tgaataacgtattcagacggaatgccaccttc	CRISPR spacer
tgaataacgtattcagacggaatgccaccttc	Protospacer
********************************

6. spacer 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 1, identity: 0.969 

gcacttgatccgccacatcctgcggaatggtt	CRISPR spacer
gcacttgatctgccacatcctgcggaatggtt	Protospacer
**********.*********************

7. spacer 1.33|364057|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 2, identity: 0.938 

gaccccattggtctaatttcgcccacgggatt	CRISPR spacer
gcccccattggtctaacttcgcccacgggatt	Protospacer
* **************.***************

8. spacer 1.33|364057|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 2, identity: 0.938 

gaccccattggtctaatttcgcccacgggatt	CRISPR spacer
gcccccattggtctaacttcgcccacgggatt	Protospacer
* **************.***************

9. spacer 5.1|2130858|32|NZ_CP028927|CRISPRCasFinder matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 2, identity: 0.938 

gcgtgctagtttgtctgctgttgctttcaaga	CRISPR spacer
acgtgctagcttgtctgctgttgctttcaaga	Protospacer
.********.**********************

10. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 4, identity: 0.875 

atattggaaaattctttattttt-tcgtgtatc	CRISPR spacer
atattggaaatttctttatttttatcctctat-	Protospacer
********** ************ ** * ***

11. spacer 1.8|362555|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036260 (Sporomusa termitida strain DSM 4440 plasmid pSPTER, complete sequence) position: , mismatch: 6, identity: 0.812 

-gcactttgtgcatcggcttttttattgctccg	CRISPR spacer
tgcggttt-ttcatcggcttttttattgcgctg	Protospacer
 **. *** * ****************** *.*

12. spacer 1.11|362735|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 6, identity: 0.812 

ttcccaattcgagtggtattggcttggtaaat	CRISPR spacer
catccaattcgagtggtattggcttgggatgt	Protospacer
. .************************ * .*

13. spacer 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 6, identity: 0.812 

-gcacttgatccgccacatcctgcggaatggtt	CRISPR spacer
cgca-atgatccggcgcatcctgcggaatgctc	Protospacer
 ***  ******* *.************** *.

14. spacer 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.812 

-gcacttgatccgccacatcctgcggaatggtt	CRISPR spacer
cgca-atgatccggcgcatcctgcggaatgctc	Protospacer
 ***  ******* *.************** *.

15. spacer 1.18|363155|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 6, identity: 0.812 

attttgtctaaaataccaatcacaatgtcgtg	CRISPR spacer
tttttgtttaaaataccaatcacaaaattgtt	Protospacer
 ******.***************** .*.**

16. spacer 1.11|362735|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 7, identity: 0.781 

ttcccaattcgagtggtattggcttggtaaat	CRISPR spacer
catccaattcgagtggtactggcttgggatgt	Protospacer
. .***************.******** * .*

17. spacer 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024582 (Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcacttgatccgccacatcctgcggaatggtt	CRISPR spacer
cgcgc-tgttccgccgcatcctgcggaatgccg	Protospacer
 **.* ** ******.************** .

18. spacer 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025188 (Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcacttgatccgccacatcctgcggaatggtt	CRISPR spacer
cgcgc-tgttccgccgcatcctgcggaatgccg	Protospacer
 **.* ** ******.************** .

19. spacer 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 7, identity: 0.781 

gcacttgatccgccacatcctgcggaatggtt	CRISPR spacer
gctcattttccgacacttcctgcggaatggtg	Protospacer
** * *  **** *** **************

20. spacer 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 7, identity: 0.781 

gcacttgatccgccacatcctgcggaatggtt	CRISPR spacer
gctcattttccgacacttcctgcggaatggtg	Protospacer
** * *  **** *** **************

21. spacer 1.34|364117|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_011971 (Bacillus cereus Q1 plasmid pBc53, complete sequence) position: , mismatch: 7, identity: 0.781 

ttccgcatattcaaccgtattatc---ttcagttg	CRISPR spacer
atccgcatattccaccgtattatcaattttaa---	Protospacer
 *********** ***********   **.*.

22. spacer 2.2|1321497|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to HQ633071 (Synechococcus phage S-SKS1 genomic sequence) position: , mismatch: 7, identity: 0.767 

acaagaaccagtttgtttattgcacccctc	CRISPR spacer
acaagaacaagtttgtttaatgctgggttc	Protospacer
******** ********** ***    .**

23. spacer 4.2|2128963|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MN694714 (Marine virus AFVG_250M691, complete genome) position: , mismatch: 7, identity: 0.781 

atctaatgatgcagggtatttatctaaatgtc	CRISPR spacer
gcctaatgatgcagagtatttatcaaaattaa	Protospacer
..************.********* ****

24. spacer 4.17|2129865|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032327 (Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence) position: , mismatch: 7, identity: 0.781 

-attatccaatgaatacatgaattaaatgatat	CRISPR spacer
caacagcc-atgaaaacatgaattaagtgataa	Protospacer
 * .* ** ***** ***********.*****

25. spacer 1.2|362195|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MN694515 (Marine virus AFVG_250M511, complete genome) position: , mismatch: 8, identity: 0.75 

-caactgtcacgcatattatcaattttgaaacc	CRISPR spacer
ttgact-ccacgcatattatcaactttaaaaag	Protospacer
 ..*** .***************.***.***

26. spacer 1.7|362495|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MN693374 (Marine virus AFVG_25M38, complete genome) position: , mismatch: 8, identity: 0.75 

gtcagatatttttacaagaatgcctgcttgga--	CRISPR spacer
cgatgatatttttaaaagaatgcttgc--ggatt	Protospacer
    ********** ********.***  ***

27. spacer 1.11|362735|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.75 

ttcccaattcgagtggtattggcttggtaaat	CRISPR spacer
catccaattcgaatgatattggcttgggatgt	Protospacer
. .*********.**.*********** * .*

28. spacer 1.13|362855|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_017959 (Tistrella mobilis KA081020-065 plasmid pTM4, complete sequence) position: , mismatch: 8, identity: 0.75 

gcacttgatccgccacatcctgcggaatggtt-	CRISPR spacer
gaactcgatccgccacatcatgcgg-gcgatcg	Protospacer
* ***.************* ***** ..*.*.

29. spacer 1.16|363035|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP021883 (Sulfuriferula nivalis strain SGTM plasmid SGTM_pl2, complete sequence) position: , mismatch: 8, identity: 0.75 

taagcttgtggcagtcggtgtgcaagtgccag	CRISPR spacer
gcaaattgtggcagtcggtttgcaattgctac	Protospacer
  *. ************** ***** ***.*

30. spacer 1.21|363335|33|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 8, identity: 0.758 

agaaatgctaaaaaaaatgttagatttttacaa	CRISPR spacer
gtagctgctaaaaacaatcttagatttttagat	Protospacer
. *. ********* *** *********** *

31. spacer 1.22|363396|33|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_017232 (Borreliella afzelii PKo plasmid lp17, complete sequence) position: , mismatch: 8, identity: 0.758 

--ctgaacgcgtttattttttcgtgaataataaaa	CRISPR spacer
ggttaaa--agtttattttttcttgaaaaataaat	Protospacer
  .*.**   ************ **** ******

32. spacer 1.24|363517|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MT362618 (Microcystis phage MaeS, complete genome) position: , mismatch: 8, identity: 0.75 

atttcccatacgattagcataaactcggttag	CRISPR spacer
atttcgaatacgattagcataaactttcgcaa	Protospacer
*****  ******************.   .*.

33. spacer 1.26|363637|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to HQ634193 (Cyanophage P-RSM6 genomic sequence) position: , mismatch: 8, identity: 0.75 

gcggtat----gtcgtcagcccaattaaaaaactgc	CRISPR spacer
----taccaaagtcatcagcccaatttaaaaacttc	Protospacer
    **.    ***.*********** ******* *

34. spacer 1.28|363757|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 8, identity: 0.75 

atagcggctgaactctcaaaagattgaccgag	CRISPR spacer
atgtgacctgaaatatcaaaagattgaccgat	Protospacer
**.  . ***** * ****************

35. spacer 1.29|363817|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MH844558 (Exiguobacterium phage vB_EauM-23, complete genome) position: , mismatch: 8, identity: 0.75 

ttggtgattcgtacagttgaaatcaacggcac	CRISPR spacer
tttgaacaacgtacagaagaaatcaacggcac	Protospacer
** * .   *******  **************

36. spacer 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 8, identity: 0.733 

cgagcgag------taaaaacatcattttctcgtac	CRISPR spacer
------agttgccctaaaaacatcatttactcgtaa	Protospacer
      **      ************** ******

37. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031267 (Staphylococcus warneri strain 16A plasmid unnamed3) position: , mismatch: 8, identity: 0.75 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
agtataaaaaattctttatcttttcctgtata	Protospacer
*   *..************.***** *****

38. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 8, identity: 0.75 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
agtataaaaaattctttatcttttcctgtata	Protospacer
*   *..************.***** *****

39. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to AP013454 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S33-C36) position: , mismatch: 8, identity: 0.75 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
atatcggaaagttctttatttttttttgccat	Protospacer
****.*****.*************. **.  .

40. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MN694775 (Marine virus AFVG_250M170, complete genome) position: , mismatch: 8, identity: 0.75 

----atattggaaaattctttattttttcgtgtatc	CRISPR spacer
aaaagtttt----aattctttatttttttgtatatc	Protospacer
    .* **    ***************.**.****

41. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MN694117 (Marine virus AFVG_250M169, complete genome) position: , mismatch: 8, identity: 0.75 

----atattggaaaattctttattttttcgtgtatc	CRISPR spacer
aaaagtttt----aattctttatttttttgtatatc	Protospacer
    .* **    ***************.**.****

42. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MN693887 (Marine virus AFVG_250M171, complete genome) position: , mismatch: 8, identity: 0.75 

----atattggaaaattctttattttttcgtgtatc	CRISPR spacer
aaaagtttt----aattctttatttttttgtatatc	Protospacer
    .* **    ***************.**.****

43. spacer 4.2|2128963|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 8, identity: 0.75 

atctaatgatgcagggtatttatc-----taaatgtc	CRISPR spacer
ttctattgatacagggtatttatcatctgtaa-----	Protospacer
 **** ****.*************     ***

44. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MT774384 (CrAssphage cr8_1, complete genome) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
gcgtaaaactcatttaaaatgtattttttaaat	Protospacer
 ****************** **.***   . **

45. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NC_006578 ([Bacillus thuringiensis] serovar konkukian str. 97-27 plasmid pBT9727, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

46. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018936 (Bacillus cereus strain JEM-2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

47. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053978 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

48. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009333 (Bacillus thuringiensis strain HD1011 plasmid 4, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

49. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018932 (Bacillus cereus strain ISSFR-3F plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

50. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053937 (Bacillus thuringiensis strain FDAARGOS_792 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

51. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018934 (Bacillus cereus strain ISSFR-9F plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

52. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018934 (Bacillus cereus strain ISSFR-9F plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

53. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

54. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
aggtaaaactcttttaaaaggttttttcataat	Protospacer
  ********* ********** ***  *  **

55. spacer 4.8|2129324|33|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010087 (Bacillus thuringiensis strain 97-27 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758 

ccgtaaaactcatttaaaaggtgtttaaagtat	CRISPR spacer
caatcgaaatcatttaaaaggtttttaaagaaa	Protospacer
* .* .** ************* ******* *

56. spacer 4.15|2129745|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 8, identity: 0.75 

agaaccagaacctacatttgttccaccttgat	CRISPR spacer
tagattataagctccatttgttccaccttgat	Protospacer
 ..*..* ** ** ******************

57. spacer 4.23|2130226|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MH706966 (Enterobacteria phage mEp021, complete genome) position: , mismatch: 8, identity: 0.75 

agtcattctttcgcagataaagggaaaaaaga	CRISPR spacer
gctcgctggttcgctgataaacggaaaaaaga	Protospacer
. **..*  ***** ****** **********

58. spacer 4.30|2130646|32|NZ_CP028927|CRISPRCasFinder,CRT matches to JF713456 (Vibrio phage 1, complete genome) position: , mismatch: 8, identity: 0.75 

tatcttc----cacattccacgttatatcgattaca	CRISPR spacer
----ttcaaaacacatcccacgttataccgattagg	Protospacer
    ***    *****.**********.****** .

59. spacer 5.1|2130858|32|NZ_CP028927|CRISPRCasFinder matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 8, identity: 0.75 

gcgtgctagtttgtctgctgttgctttcaaga	CRISPR spacer
ccgactgagtttgtctgctcttgctttcaatt	Protospacer
 **  . ************ **********

60. spacer 1.5|362375|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_047926 (Lactobacillus phage Semele, complete genome) position: , mismatch: 9, identity: 0.719 

attaatcaaatgcttaccaaggctactactaa	CRISPR spacer
accttgaacatgcgtaccaaggctacaactaa	Protospacer
*..    * **** ************ *****

61. spacer 1.5|362375|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MG557979 (Lactobacillus phage Lpa804, complete genome) position: , mismatch: 9, identity: 0.719 

attaatcaaatgcttaccaaggctactactaa	CRISPR spacer
accttgaacatgcgtaccaaggctacaactaa	Protospacer
*..    * **** ************ *****

62. spacer 1.9|362615|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MN692980 (Marine virus AFVG_117M21, complete genome) position: , mismatch: 9, identity: 0.719 

aatctctaattgttctttccgctctgtcattt	CRISPR spacer
aatctttacttgttctttccgctgttgaaagc	Protospacer
*****.** ************** *   *  .

63. spacer 1.21|363335|33|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_017483 (Lactococcus lactis subsp. lactis CV56 plasmid pCV56A, complete sequence) position: , mismatch: 9, identity: 0.727 

agaaatgctaaaaaaaatgttagatttttacaa	CRISPR spacer
atggatggtaaaaaaaatgttagatgttgaggg	Protospacer
* ..*** ***************** ** * ..

64. spacer 1.23|363457|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gatttgcgaacttgacaacgccaaccagattt	CRISPR spacer
cacgggcgatcttgccaacgccaaccagaccg	Protospacer
 *.  **** **** **************..

65. spacer 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 9, identity: 0.7 

cgagcgagtaaaaacatcattttctcgtac	CRISPR spacer
tgttgctttaaaaacatcatttactcgtaa	Protospacer
.*      ************** ******

66. spacer 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021876 (Enterococcus wangshanyuanii strain MN05 plasmid unnamed3) position: , mismatch: 9, identity: 0.7 

cgagcgagtaaaaacatcattttctcgtac	CRISPR spacer
ttttagaataaaaacatcattttctctatc	Protospacer
.    **.******************   *

67. spacer 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021876 (Enterococcus wangshanyuanii strain MN05 plasmid unnamed3) position: , mismatch: 9, identity: 0.7 

cgagcgagtaaaaacatcattttctcgtac	CRISPR spacer
ttttagaataaaaacatcattttctctatc	Protospacer
.    **.******************   *

68. spacer 2.1|1321431|30|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.7 

cgagcgagtaaaaacatcattttctcgtac	CRISPR spacer
tgttgctttaaaaacatcatttactcgtaa	Protospacer
.*      ************** ******

69. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040462 (Enterococcus sp. M190262 plasmid pM190262, complete sequence) position: , mismatch: 9, identity: 0.719 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
ggataagaaaattctatattttttcatgttgt	Protospacer
. ** .********* *********.***  .

70. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
taattggtaaatcctttattttttcatacagt	Protospacer
  ***** ****.************.*..* .

71. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 9, identity: 0.719 

-atattggaaaattctttattttttcgtgtatc	CRISPR spacer
tgcatc-caaaacactttattttttcgtgtaag	Protospacer
 ..**.  ****. *****************

72. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051211 (Acinetobacter sp. NEB149 plasmid pMsp22, complete sequence) position: , mismatch: 9, identity: 0.719 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
ttattagaaaattcttaattttttaaaatttt	Protospacer
 ****.********** ******* . .* *.

73. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032287 (Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.2, complete sequence) position: , mismatch: 9, identity: 0.719 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
ttattagaaaattcttaattttttaaaatttt	Protospacer
 ****.********** ******* . .* *.

74. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MK449008 (Streptococcus phage Javan84, complete genome) position: , mismatch: 9, identity: 0.719 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
ttattggcaaattctttatttattgccattac	Protospacer
 ****** ************* **  ..*  *

75. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MK448832 (Streptococcus phage Javan85, complete genome) position: , mismatch: 9, identity: 0.719 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
ttattggcaaattctttatttattgccattac	Protospacer
 ****** ************* **  ..*  *

76. spacer 4.2|2128963|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MN693165 (Marine virus AFVG_25M308, complete genome) position: , mismatch: 9, identity: 0.719 

atctaatgatgcagggtatttatctaaatgtc	CRISPR spacer
ccaaaatgatgtaggttatttatctaatggtg	Protospacer
 .  *******.*** ***********  **

77. spacer 4.15|2129745|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MN693124 (Marine virus AFVG_25M44, complete genome) position: , mismatch: 9, identity: 0.719 

agaaccagaacctacatttgttccaccttgat	CRISPR spacer
aaccccagaacctaaaattgttccaccaccag	Protospacer
*.  ********** * ********** . *

78. spacer 4.24|2130286|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 9, identity: 0.719 

tactctatcgaaccccatccaaaacggctggg	CRISPR spacer
ttcattatcgatcccgatccaaaacggcatcc	Protospacer
* * .****** *** ************

79. spacer 1.9|362615|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 10, identity: 0.688 

aatctctaattgttctttccgctctgtcattt	CRISPR spacer
tttctctaatcgttttttccgctcttcagcta	Protospacer
  ********.***.********** . ..*

80. spacer 1.18|363155|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 10, identity: 0.688 

attttgtctaaaataccaatcacaatgtcgtg	CRISPR spacer
tcgttttctaaaataccaataacaatagaatt	Protospacer
 . ** ************** *****.  .*

81. spacer 1.18|363155|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 10, identity: 0.688 

attttgtctaaaataccaatcacaatgtcgtg	CRISPR spacer
tcgttttctaaaataccaataacaatagaatt	Protospacer
 . ** ************** *****.  .*

82. spacer 1.26|363637|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to AP014715 (Edwardsiella phage PEi26 DNA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggtatgtcgtcagcccaattaaaaaactgc	CRISPR spacer
tagttatgtcgtcagcccatttagaaacaaag	Protospacer
  * *************** ***.***   .

83. spacer 1.26|363637|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_028683 (Edwardsiella phage PEi20 DNA, complete sequence) position: , mismatch: 10, identity: 0.688 

gcggtatgtcgtcagcccaattaaaaaactgc	CRISPR spacer
tagttatgtcgtcagcccatttagaaacaaag	Protospacer
  * *************** ***.***   .

84. spacer 4.1|2128903|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134427 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 18) position: , mismatch: 10, identity: 0.688 

atattggaaaattctttattttttcgtgtatc	CRISPR spacer
atactggaaaattctttgttttttaaaccggt	Protospacer
***.*************.****** .  .. .

85. spacer 4.4|2129084|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to AJ298298 (Bacteriophage P27 complete genome) position: , mismatch: 10, identity: 0.688 

agtaaacaatctatttaccttgatgccaataa	CRISPR spacer
gtcgcccagtttatttaccttgatgccaacat	Protospacer
. ..  **.*.******************.*

86. spacer 4.4|2129084|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NC_003356 (Enterobacteria phage phiP27, complete genome) position: , mismatch: 10, identity: 0.688 

agtaaacaatctatttaccttgatgccaataa	CRISPR spacer
gtcgcccagtttatttaccttgatgccaacat	Protospacer
. ..  **.*.******************.*

87. spacer 4.9|2129385|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013044 (Clostridium perfringens strain JP55 plasmid pJFP55J, complete sequence) position: , mismatch: 10, identity: 0.688 

gacggaagaccaaagttcttttgaataagaaa	CRISPR spacer
ttttgaaaatcaaagttcttttgaatatgggt	Protospacer
  . ***.*.***************** *..

88. spacer 4.13|2129625|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032091 (Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

aagatagccgagcagggcgcaaaagctattct	CRISPR spacer
gtagcagccgagtatggcgcaaaagctatggc	Protospacer
. ...*******.* **************  .

89. spacer 4.14|2129685|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MN694570 (Marine virus AFVG_250M650, complete genome) position: , mismatch: 10, identity: 0.688 

gcttatgtatcgcgttttttaattcgacgtat	CRISPR spacer
agttatctatcgcgatttttaattctgaaaag	Protospacer
. **** ******* ********** . . *

90. spacer 4.20|2130046|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to MN693034 (Marine virus AFVG_117M74, complete genome) position: , mismatch: 10, identity: 0.688 

atttttccctacagtttcgacttcatatccct	CRISPR spacer
tcttttccctacattttctacttcaggtagta	Protospacer
 .*********** **** ****** .*  .

91. spacer 4.24|2130286|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NC_016615 (Arthrobacter rhombi strain PRH1 plasmid pPRH, complete sequence) position: , mismatch: 10, identity: 0.688 

tactctatcgaaccccatccaaaacggctggg	CRISPR spacer
catgaccaagaaccccatccatgacggctggg	Protospacer
.*.  .   ************ .*********

92. spacer 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 11, identity: 0.656 

gaacatatccaattttaatttgctgatttatt	CRISPR spacer
ttcttcatcaaattttaatttcctgatttgac	Protospacer
   . .*** *********** *******. .

93. spacer 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 11, identity: 0.656 

gaacatatccaattttaatttgctgatttatt	CRISPR spacer
ttcttcatcaaattttaatttcctgatttgac	Protospacer
   . .*** *********** *******. .

94. spacer 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 11, identity: 0.656 

gaacatatccaattttaatttgctgatttatt	CRISPR spacer
ttcttcatcaaattttaatttcctgatttgac	Protospacer
   . .*** *********** *******. .

95. spacer 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 11, identity: 0.656 

gaacatatccaattttaatttgctgatttatt	CRISPR spacer
ttcttcatcaaattttaatttcctgatttgac	Protospacer
   . .*** *********** *******. .

96. spacer 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 11, identity: 0.656 

gaacatatccaattttaatttgctgatttatt	CRISPR spacer
ttcttcatcaaattttaatttcctgatttgac	Protospacer
   . .*** *********** *******. .

97. spacer 1.10|362675|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 11, identity: 0.656 

gaacatatccaattttaatttgctgatttatt	CRISPR spacer
ttcttcatcaaattttaatttcctgatttgac	Protospacer
   . .*** *********** *******. .

98. spacer 1.14|362915|32|NZ_CP028927|CRISPRCasFinder,CRT,PILER-CR matches to MN694362 (Marine virus AFVG_250M129, complete genome) position: , mismatch: 11, identity: 0.656 

ttaatcccaaagttttaatgaatcttttttga	CRISPR spacer
ataaccccgaagttttaatgaatcaccaactg	Protospacer
 ***.***.*************** ..  . .

99. spacer 4.25|2130346|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to CP053415 (Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656 

tttaactatgcagcaagcgaaaccaaggaaga	CRISPR spacer
ggacactatgcagccagcgagaccaagtccat	Protospacer
    ********** *****.******   .

100. spacer 4.25|2130346|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to CP053327 (Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656 

tttaactatgcagcaagcgaaaccaaggaaga	CRISPR spacer
ggacactatgcagccagcgagaccaagtccat	Protospacer
    ********** *****.******   .

101. spacer 4.25|2130346|32|NZ_CP028927|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030289 (Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence) position: , mismatch: 11, identity: 0.656 

tttaactatgcagcaagcgaaaccaaggaaga	CRISPR spacer
ggacactatgcagccagcgagaccaagtccat	Protospacer
    ********** *****.******   .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 269074 : 278432 9 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_2 1960491 : 1973418 19 Haemophilus_phage(33.33%) terminase,holin NA
DBSCAN-SWA_3 1976691 : 1986778 17 Mannheimia_phage(40.0%) integrase attL 1977698:1977712|attR 1993999:1994013

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage