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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP029108 Escherichia coli strain AR437 chromosome, complete genome 11 crisprs RT,DEDDh,cas3,csa3,PD-DExK,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG 0 24 10 0
NZ_CP029103 Escherichia coli strain AR437 plasmid unnamed1, complete sequence 1 crisprs NA 0 1 1 0
NZ_CP029107 Escherichia coli strain AR437 plasmid unnamed5, complete sequence 0 crisprs NA 0 0 2 0
NZ_CP029106 Escherichia coli strain AR437 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP029104 Escherichia coli strain AR437 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP029105 Escherichia coli strain AR437 plasmid unnamed3, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP029108
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_1 28694-28838 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_2 550299-550452 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_3 740363-740478 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_4 763391-763523 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_5 2216933-2217072 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_6 2261833-2261950 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_7 2635283-2635799 Orphan I-E
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_8 2658184-2658762 Unclear I-E
9 spacers
cas2,cas1,cas6e,cas5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_9 3160085-3160202 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_10 3756772-3756895 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029108_11 4411980-4412071 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP029108_4 4.1|763408|42|NZ_CP029108|PILER-CR 763408-763449 42 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141085-141126 0 1.0
NZ_CP029108_11 11.1|4412006|40|NZ_CP029108|CRISPRCasFinder 4412006-4412045 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_CP029108_4 4.2|763467|40|NZ_CP029108|PILER-CR 763467-763506 40 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141028-141067 1 0.975
NZ_CP029108_10 10.1|3756815|38|NZ_CP029108|CRISPRCasFinder 3756815-3756852 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP029108_2 2.1|550352|48|NZ_CP029108|CRISPRCasFinder 550352-550399 48 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4089-4136 3 0.938
NZ_CP029108_2 2.1|550352|48|NZ_CP029108|CRISPRCasFinder 550352-550399 48 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4088-4135 3 0.938
NZ_CP029108_2 2.1|550352|48|NZ_CP029108|CRISPRCasFinder 550352-550399 48 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4088-4135 3 0.938
NZ_CP029108_2 2.1|550352|48|NZ_CP029108|CRISPRCasFinder 550352-550399 48 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4088-4135 3 0.938
NZ_CP029108_5 5.1|2216982|42|NZ_CP029108|CRISPRCasFinder 2216982-2217023 42 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30214-30255 7 0.833
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_MG299151 Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence 51276-51307 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_KY471628 Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence 45716-45747 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_MG299131 Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence 51276-51307 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_KY471629 Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence 45716-45747 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_MG299133 Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence 51276-51307 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_MG299128 Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence 51276-51307 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_MG299147 Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence 51276-51307 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NC_018995 Escherichia coli plasmid pHUSEC41-1, complete sequence 29015-29046 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_CP053235 Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence 78292-78323 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_CP005999 Escherichia coli B7A plasmid pEB1, complete sequence 39563-39594 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 KU932021 Escherichia coli plasmid pEC3I, complete sequence 51902-51933 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_CP024154 Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence 18560-18591 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NC_011754 Escherichia coli ED1a plasmid pECOED, complete sequence 49240-49271 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_CP015141 Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence 81434-81465 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_LR213460 Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3 28916-28947 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_MH287044 Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence 36182-36213 7 0.781
NZ_CP029108_7 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635678-2635709 32 NZ_MH618673 Escherichia coli strain 838B plasmid p838B-R, complete sequence 32230-32261 7 0.781
NZ_CP029108_8 8.1|2658214|31|NZ_CP029108|CRISPRCasFinder 2658214-2658244 31 NC_007336 Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence 62682-62712 7 0.774
NZ_CP029108_8 8.1|2658214|31|NZ_CP029108|CRISPRCasFinder 2658214-2658244 31 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1222106-1222136 7 0.774
NZ_CP029108_8 8.1|2658214|31|NZ_CP029108|CRISPRCasFinder 2658214-2658244 31 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 2467672-2467702 7 0.774
NZ_CP029108_8 8.4|2658397|31|NZ_CP029108|CRISPRCasFinder 2658397-2658427 31 NZ_CP034185 Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence 17977-18007 7 0.774
NZ_CP029108_8 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder 2658580-2658610 31 NC_007336 Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence 530641-530671 7 0.774
NZ_CP029108_5 5.1|2216982|42|NZ_CP029108|CRISPRCasFinder 2216982-2217023 42 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24899-24940 8 0.81
NZ_CP029108_7 7.6|2635617|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635617-2635648 32 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1417960-1417991 8 0.75
NZ_CP029108_8 8.4|2658397|31|NZ_CP029108|CRISPRCasFinder 2658397-2658427 31 NZ_CP017753 Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence 97498-97528 8 0.742
NZ_CP029108_8 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder 2658580-2658610 31 NZ_CP036297 Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence 14953-14983 8 0.742
NZ_CP029108_8 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder 2658580-2658610 31 NZ_CP036288 Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence 14983-15013 8 0.742
NZ_CP029108_8 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder 2658580-2658610 31 NZ_CP015882 Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence 3454-3484 8 0.742
NZ_CP029108_8 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder 2658580-2658610 31 NZ_CP017750 Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence 148992-149022 8 0.742
NZ_CP029108_8 8.10|2658213|33|NZ_CP029108|PILER-CR 2658213-2658245 33 NC_007336 Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence 62681-62713 8 0.758
NZ_CP029108_8 8.16|2658579|33|NZ_CP029108|PILER-CR 2658579-2658611 33 NC_007336 Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence 530640-530672 8 0.758
NZ_CP029108_8 8.19|2658214|32|NZ_CP029108|CRT 2658214-2658245 32 NC_007336 Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence 62682-62713 8 0.75
NZ_CP029108_8 8.19|2658214|32|NZ_CP029108|CRT 2658214-2658245 32 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1222106-1222137 8 0.75
NZ_CP029108_8 8.19|2658214|32|NZ_CP029108|CRT 2658214-2658245 32 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 2467671-2467702 8 0.75
NZ_CP029108_8 8.19|2658214|32|NZ_CP029108|CRT 2658214-2658245 32 NC_008759 Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence 12670-12701 8 0.75
NZ_CP029108_8 8.22|2658397|32|NZ_CP029108|CRT 2658397-2658428 32 NZ_CP034185 Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence 17977-18008 8 0.75
NZ_CP029108_8 8.22|2658397|32|NZ_CP029108|CRT 2658397-2658428 32 NZ_CP017753 Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence 97497-97528 8 0.75
NZ_CP029108_8 8.25|2658580|32|NZ_CP029108|CRT 2658580-2658611 32 NZ_CP017750 Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence 148991-149022 8 0.75
NZ_CP029108_8 8.25|2658580|32|NZ_CP029108|CRT 2658580-2658611 32 NC_007336 Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence 530640-530671 8 0.75
NZ_CP029108_8 8.26|2658641|32|NZ_CP029108|CRT 2658641-2658672 32 NZ_CP006991 Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence 532343-532374 8 0.75
NZ_CP029108_5 5.1|2216982|42|NZ_CP029108|CRISPRCasFinder 2216982-2217023 42 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24786-24827 9 0.786
NZ_CP029108_8 8.1|2658214|31|NZ_CP029108|CRISPRCasFinder 2658214-2658244 31 NC_011987 Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence 86182-86212 9 0.71
NZ_CP029108_8 8.2|2658275|31|NZ_CP029108|CRISPRCasFinder 2658275-2658305 31 CP011075 Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence 244686-244716 9 0.71
NZ_CP029108_8 8.2|2658275|31|NZ_CP029108|CRISPRCasFinder 2658275-2658305 31 GU075905 Prochlorococcus phage P-HM2, complete genome 78536-78566 9 0.71
NZ_CP029108_8 8.4|2658397|31|NZ_CP029108|CRISPRCasFinder 2658397-2658427 31 NZ_CP017750 Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence 405875-405905 9 0.71
NZ_CP029108_8 8.4|2658397|31|NZ_CP029108|CRISPRCasFinder 2658397-2658427 31 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 2248363-2248393 9 0.71
NZ_CP029108_8 8.8|2658641|31|NZ_CP029108|CRISPRCasFinder 2658641-2658671 31 NZ_CP040723 Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence 35740-35770 9 0.71
NZ_CP029108_8 8.10|2658213|33|NZ_CP029108|PILER-CR 2658213-2658245 33 NC_011987 Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence 86181-86213 9 0.727
NZ_CP029108_8 8.13|2658396|33|NZ_CP029108|PILER-CR 2658396-2658428 33 NZ_CP034185 Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence 17976-18008 9 0.727
NZ_CP029108_8 8.22|2658397|32|NZ_CP029108|CRT 2658397-2658428 32 NZ_CP017750 Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence 405875-405906 9 0.719
NZ_CP029108_8 8.25|2658580|32|NZ_CP029108|CRT 2658580-2658611 32 NZ_CP036297 Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence 14953-14984 9 0.719
NZ_CP029108_8 8.25|2658580|32|NZ_CP029108|CRT 2658580-2658611 32 NZ_CP036288 Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence 14983-15014 9 0.719
NZ_CP029108_8 8.25|2658580|32|NZ_CP029108|CRT 2658580-2658611 32 NZ_CP015882 Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence 3454-3485 9 0.719
NZ_CP029108_8 8.26|2658641|32|NZ_CP029108|CRT 2658641-2658672 32 NZ_CP040723 Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence 35740-35771 9 0.719
NZ_CP029108_7 7.1|2635312|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT 2635312-2635343 32 NZ_CP030933 Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence 51062-51093 10 0.688
NZ_CP029108_8 8.11|2658274|33|NZ_CP029108|PILER-CR 2658274-2658306 33 GU075905 Prochlorococcus phage P-HM2, complete genome 78535-78567 10 0.697
NZ_CP029108_8 8.16|2658579|33|NZ_CP029108|PILER-CR 2658579-2658611 33 NZ_CP036297 Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence 14952-14984 10 0.697
NZ_CP029108_8 8.16|2658579|33|NZ_CP029108|PILER-CR 2658579-2658611 33 NZ_CP036288 Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence 14982-15014 10 0.697
NZ_CP029108_8 8.17|2658640|33|NZ_CP029108|PILER-CR 2658640-2658672 33 NZ_CP040723 Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence 35739-35771 10 0.697
NZ_CP029108_8 8.19|2658214|32|NZ_CP029108|CRT 2658214-2658245 32 NC_011987 Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence 86181-86212 10 0.688
NZ_CP029108_8 8.20|2658275|32|NZ_CP029108|CRT 2658275-2658306 32 CP011075 Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence 244686-244717 10 0.688
NZ_CP029108_8 8.20|2658275|32|NZ_CP029108|CRT 2658275-2658306 32 GU075905 Prochlorococcus phage P-HM2, complete genome 78536-78567 10 0.688
NZ_CP029108_8 8.22|2658397|32|NZ_CP029108|CRT 2658397-2658428 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 2248362-2248393 10 0.688

1. spacer 4.1|763408|42|NZ_CP029108|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcacacgcagataaatccaactttcaatattgttaagttc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
******************************************

2. spacer 11.1|4412006|40|NZ_CP029108|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

3. spacer 4.2|763467|40|NZ_CP029108|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975

catggcgtagcaaaaagaaattttcaatattgctttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *****************************

4. spacer 10.1|3756815|38|NZ_CP029108|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

5. spacer 2.1|550352|48|NZ_CP029108|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 3, identity: 0.938

tcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
ccagcgtcgcatcaggcatctgcgcataactgccggatgcggcataaa	Protospacer
.*****************************.************.****

6. spacer 2.1|550352|48|NZ_CP029108|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 3, identity: 0.938

tcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
ccagcgtcgcatcaggcatctgcgcataactgccggatgcggcataaa	Protospacer
.*****************************.************.****

7. spacer 2.1|550352|48|NZ_CP029108|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 3, identity: 0.938

tcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
ccagcgtcgcatcaggcatctgcgcataactgccggatgcggcataaa	Protospacer
.*****************************.************.****

8. spacer 2.1|550352|48|NZ_CP029108|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 3, identity: 0.938

tcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
ccagcgtcgcatcaggcatctgcgcataactgccggatgcggcataaa	Protospacer
.*****************************.************.****

9. spacer 5.1|2216982|42|NZ_CP029108|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.833

acagcagtcggatgcggcgtaaacaccttatctgacctacgt	CRISPR spacer
acaaatgccggatgcggcgtaaacgccttatctggcctacgc	Protospacer
***.  *.****************.*********.******.

10. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

11. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

12. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

13. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

14. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

15. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

16. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

17. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NC_018995 (Escherichia coli plasmid pHUSEC41-1, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

18. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053235 (Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

19. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP005999 (Escherichia coli B7A plasmid pEB1, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

20. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to KU932021 (Escherichia coli plasmid pEC3I, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

21. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024154 (Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

22. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

23. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015141 (Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

24. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR213460 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

25. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH287044 (Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

26. spacer 7.7|2635678|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH618673 (Escherichia coli strain 838B plasmid p838B-R, complete sequence) position: , mismatch: 7, identity: 0.781

aaatatccagggctgggctggaggcagacggc--	CRISPR spacer
cgttatccagggctgagctgcaggcag--ggcca	Protospacer
 . ************.**** ******  ***  

27. spacer 8.1|2658214|31|NZ_CP029108|CRISPRCasFinder matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.774

ttgcccgcgcaattccgggagcatccgcaat	CRISPR spacer
tccctatcgcaatgccggcagcatccgcaat	Protospacer
*. *.  ****** **** ************

28. spacer 8.1|2658214|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

ttgcccgcgcaattccgggagcatccgcaat	CRISPR spacer
ttgcgcgcgcaattccgtgagcagcgccatc	Protospacer
**** ************ ***** *  ** .

29. spacer 8.1|2658214|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ttgcccgcgcaattccgggagcatccgcaat	CRISPR spacer
ttgcgcgcgcaattccgtgagcagcgccatc	Protospacer
**** ************ ***** *  ** .

30. spacer 8.4|2658397|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

cccgtcaccgacgcgcagtggcgctaccgtg	CRISPR spacer
agcgtcaccgacgcgcagggccgctaccaac	Protospacer
  **************** * *******.  

31. spacer 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.774

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
ccgaacaggtggcgaagcaggtgatgggcca	Protospacer
******.* **************.. ***  

32. spacer 5.1|2216982|42|NZ_CP029108|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 8, identity: 0.81

acagcagtcggatgcggcgtaaacaccttatctgacctacgt	CRISPR spacer
attgatgtcggatgcggcgtaaacgccttatccgacctacaa	Protospacer
*. *  ******************.*******.*******. 

33. spacer 7.6|2635617|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcaacgcgctcagacgttgcgtgagtgaacca	CRISPR spacer
acaacgcggtcggacgttgcgtgattaccccg	Protospacer
 ******* **.************ *.  **.

34. spacer 8.4|2658397|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

cccgtcaccgacgcgcagtggcgctaccgtg	CRISPR spacer
gacgtcaccgacgcgcagtcgcgcttcttca	Protospacer
  ***************** ***** *. ..

35. spacer 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgt	Protospacer
   ..*.******** ********** ****

36. spacer 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgt	Protospacer
   ..*.******** ********** ****

37. spacer 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.742

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
ttgcgcagctggcgcagcaggtggctgccga	Protospacer
..* .*.******* ************ ** 

38. spacer 8.7|2658580|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgaacggctggcgaagcaggtggctggcgt	CRISPR spacer
gggtacggctggcgaaggaggcggctgcgga	Protospacer
  * ************* ***.*****  * 

39. spacer 8.10|2658213|33|NZ_CP029108|PILER-CR matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.758

gttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
gtccctatcgcaatgccggcagcatccgcaatc	Protospacer
**. *.  ****** **** ************.

40. spacer 8.16|2658579|33|NZ_CP029108|PILER-CR matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.758

gccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
gccgaacaggtggcgaagcaggtgatgggccag	Protospacer
*******.* **************.. ***  .

41. spacer 8.19|2658214|32|NZ_CP029108|CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
tccctatcgcaatgccggcagcatccgcaatc	Protospacer
*. *.  ****** **** ************.

42. spacer 8.19|2658214|32|NZ_CP029108|CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
ttgcgcgcgcaattccgtgagcagcgccatca	Protospacer
**** ************ ***** *  ** . 

43. spacer 8.19|2658214|32|NZ_CP029108|CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
ttgcgcgcgcaattccgtgagcagcgccatca	Protospacer
**** ************ ***** *  ** . 

44. spacer 8.19|2658214|32|NZ_CP029108|CRT matches to NC_008759 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence) position: , mismatch: 8, identity: 0.75

ttgcccgcg-----caattccgggagcatccgcaatt	CRISPR spacer
-----cgtgaaactcatttccgggagcatccgcattt	Protospacer
     **.*     ** ***************** **

45. spacer 8.22|2658397|32|NZ_CP029108|CRT matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
agcgtcaccgacgcgcagggccgctaccaact	Protospacer
  **************** * *******.   

46. spacer 8.22|2658397|32|NZ_CP029108|CRT matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
gacgtcaccgacgcgcagtcgcgcttcttcaa	Protospacer
  ***************** ***** *. ..*

47. spacer 8.25|2658580|32|NZ_CP029108|CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
gggtacggctggcgaaggaggcggctgcggaa	Protospacer
  * ************* ***.*****  * *

48. spacer 8.25|2658580|32|NZ_CP029108|CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
ccgaacaggtggcgaagcaggtgatgggccag	Protospacer
******.* **************.. ***  .

49. spacer 8.26|2658641|32|NZ_CP029108|CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
catcatcctcccgcagatgcgctggccgatcc	Protospacer
  *.*.* .******** ******** *****

50. spacer 5.1|2216982|42|NZ_CP029108|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.786

acagcagtcggatgcggcgtaaacaccttatctgacctacgt	CRISPR spacer
gttgatgtcggatgcggcgtaaacgccttatccgacctacaa	Protospacer
.. *  ******************.*******.*******. 

51. spacer 8.1|2658214|31|NZ_CP029108|CRISPRCasFinder matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 9, identity: 0.71

ttgcccgcgcaattccgggagcatccgcaat	CRISPR spacer
gctaccgcgcaattcgaggagcatccgctgg	Protospacer
 .  *********** .*********** . 

52. spacer 8.2|2658275|31|NZ_CP029108|CRISPRCasFinder matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

acggacaaaatatatattgatttgcgaatta	CRISPR spacer
tgaggcaaaatatagattgatttccgaaaat	Protospacer
  .*.********* ******** ****   

53. spacer 8.2|2658275|31|NZ_CP029108|CRISPRCasFinder matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 9, identity: 0.71

acggacaaaatatatattgatttgcgaatta	CRISPR spacer
acggaaaaattatatattgattttacttctg	Protospacer
***** *** *************     .*.

54. spacer 8.4|2658397|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

cccgtcaccgacgcgcagtggcgctaccgtg	CRISPR spacer
gacgtcactgacgcgcagtcgcgcttcttca	Protospacer
  ******.********** ***** *. ..

55. spacer 8.4|2658397|31|NZ_CP029108|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.71

cccgtcaccgacgcgcagtggcgctaccgtg	CRISPR spacer
gacatcaccgacgcccagtggcgcgacgtcc	Protospacer
  *.********** ********* **  . 

56. spacer 8.8|2658641|31|NZ_CP029108|CRISPRCasFinder matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.71

gtttaccgccccgcagaggcgctggcagatc	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcga	Protospacer
    ******.*** *************   

57. spacer 8.10|2658213|33|NZ_CP029108|PILER-CR matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 9, identity: 0.727

-gttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
cgcta-ccgcgcaattcgaggagcatccgctggg	Protospacer
 *.*. *********** .*********** .  

58. spacer 8.13|2658396|33|NZ_CP029108|PILER-CR matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

gcccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
cagcgtcaccgacgcgcagggccgctaccaact	Protospacer
   **************** * *******.   

59. spacer 8.22|2658397|32|NZ_CP029108|CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
gacgtcactgacgcgcagtcgcgcttcttcaa	Protospacer
  ******.********** ***** *. ..*

60. spacer 8.25|2658580|32|NZ_CP029108|CRT matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgtg	Protospacer
   ..*.******** ********** ****.

61. spacer 8.25|2658580|32|NZ_CP029108|CRT matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
agcggcagctggcgatgcaggtggcttgcgtg	Protospacer
   ..*.******** ********** ****.

62. spacer 8.25|2658580|32|NZ_CP029108|CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
ttgcgcagctggcgcagcaggtggctgccgag	Protospacer
..* .*.******* ************ ** .

63. spacer 8.26|2658641|32|NZ_CP029108|CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcgac	Protospacer
    ******.*** *************   *

64. spacer 7.1|2635312|32|NZ_CP029108|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgctgtaacggccatcattaagtttagt	CRISPR spacer
ccgctgctgtgacgcccatcattaagttactc	Protospacer
.*  .*****.*** *************   .

65. spacer 8.11|2658274|33|NZ_CP029108|PILER-CR matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 10, identity: 0.697

gacggacaaaatatatattgatttgcgaattat	CRISPR spacer
gacggaaaaattatatattgattttacttctgg	Protospacer
****** *** *************     .*. 

66. spacer 8.16|2658579|33|NZ_CP029108|PILER-CR matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 10, identity: 0.697

gccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
cagcggcagctggcgatgcaggtggcttgcgtg	Protospacer
    ..*.******** ********** ****.

67. spacer 8.16|2658579|33|NZ_CP029108|PILER-CR matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 10, identity: 0.697

gccgaacggctggcgaagcaggtggctggcgta	CRISPR spacer
cagcggcagctggcgatgcaggtggcttgcgtg	Protospacer
    ..*.******** ********** ****.

68. spacer 8.17|2658640|33|NZ_CP029108|PILER-CR matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.697

ggtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
ccgagaccgcctcgccgaggcgctggcagcgac	Protospacer
     ******.*** *************   *

69. spacer 8.19|2658214|32|NZ_CP029108|CRT matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 10, identity: 0.688

ttgcccgcgcaattccgggagcatccgcaatt	CRISPR spacer
gctaccgcgcaattcgaggagcatccgctggg	Protospacer
 .  *********** .*********** .  

70. spacer 8.20|2658275|32|NZ_CP029108|CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

acggacaaaatatatattgatttgcgaattat	CRISPR spacer
tgaggcaaaatatagattgatttccgaaaata	Protospacer
  .*.********* ******** ****    

71. spacer 8.20|2658275|32|NZ_CP029108|CRT matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 10, identity: 0.688

acggacaaaatatatattgatttgcgaattat	CRISPR spacer
acggaaaaattatatattgattttacttctgg	Protospacer
***** *** *************     .*. 

72. spacer 8.22|2658397|32|NZ_CP029108|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

cccgtcaccgacgcgcagtggcgctaccgtga	CRISPR spacer
gacatcaccgacgcccagtggcgcgacgtccc	Protospacer
  *.********** ********* **  .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 6 : 27210 43 Enterobacteria_phage(47.06%) tail,lysis,integrase attL 1922:1936|attR 27284:27298
DBSCAN-SWA_2 515960 : 541180 27 Shigella_phage(38.46%) integrase,lysis,portal attL 511805:511864|attR 537265:537324
DBSCAN-SWA_3 841683 : 858727 13 Enterobacteria_phage(38.46%) tail,integrase attL 847264:847278|attR 860708:860722
DBSCAN-SWA_4 935489 : 996610 54 Escherichia_phage(14.29%) protease,integrase,tRNA,transposase attL 956082:956109|attR 963396:963423
DBSCAN-SWA_5 1845627 : 1883649 31 Bacillus_phage(44.44%) integrase,transposase attL 1834080:1834094|attR 1858106:1858120
DBSCAN-SWA_6 2666187 : 2679370 12 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_7 3532291 : 3560494 45 Klebsiella_phage(21.88%) terminase,integrase,holin,transposase attL 3534247:3534266|attR 3560667:3560686
DBSCAN-SWA_8 3842651 : 3871243 31 Escherichia_phage(25.0%) tail,lysis,integrase attL 3843716:3843730|attR 3867483:3867497
DBSCAN-SWA_9 4272668 : 4285406 13 Enterobacteria_phage(33.33%) integrase,transposase attL 4270641:4270664|attR 4284109:4284132
DBSCAN-SWA_10 4600559 : 4609329 12 Salmonella_phage(90.0%) integrase attL 4600229:4600242|attR 4609371:4609384
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP029103
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029103_1 82099-82172 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 53344-53371 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_KX928752 Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence 40863-40890 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 CP054337 Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence 4396-4423 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP019188 Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 plasmid pATCC10729_02, complete sequence 15478-15505 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP010173 Escherichia coli strain H8 plasmid A, complete sequence 20374-20401 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP020522 Escherichia coli strain 190 plasmid unnamed3, complete sequence 18316-18343 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP047090 Salmonella sp. S13 plasmid pS13-1, complete sequence 79058-79085 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 81839-81866 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP009051 Escherichia coli NCCP15648 plasmid p15648-1, complete sequence 38340-38367 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP039843 Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_1 6248-6275 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 51936-51963 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP035313 Escherichia coli strain D72 plasmid pD72-mcr1, complete sequence 22222-22249 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP029103 Escherichia coli strain AR437 plasmid unnamed1, complete sequence 82122-82149 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_AP018809 Escherichia coli strain E2865 plasmid pE2865-1, complete sequence 36476-36503 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP023732 Escherichia coli strain FORC 064 plasmid pFORC64.1, complete sequence 6068-6095 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP023896 Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence 74487-74514 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP046005 Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence 87300-87327 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP030784 Escherichia albertii strain 2012EL-1823B plasmid unnamed1, complete sequence 84511-84538 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NC_017653 Escherichia coli O55:H7 str. RM12579 plasmid p12579_1, complete sequence 39176-39203 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP019054 Escherichia coli strain CRE1540 plasmid p1540-3, complete sequence 113706-113733 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP028125 Escherichia coli O26 str. RM10386 plasmid pRM10386-1, complete sequence 83204-83231 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 34990-35017 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP037905 Escherichia coli strain LHM10-1 plasmid unnamed2, complete sequence 56007-56034 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP016549 Escherichia coli strain O177:H21 plasmid unnamed3, complete sequence 28777-28804 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP016549 Escherichia coli strain O177:H21 plasmid unnamed3, complete sequence 115286-115313 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_LT985263 Escherichia coli strain 511 plasmid RCS54_p, complete sequence 83641-83668 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MG196293 Escherichia coli strain SDX5C133 plasmid pHNSD133T1, complete sequence 92546-92573 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 11610-11637 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 MH160767 Escherichia phage vB_EcoM-Ro157c2YLVW, complete genome 33924-33951 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 AF234173 Enterobacteria phage P1 mod1902::IS5 c1.100 rev dmt(del)MB mutant, complete genome 42517-42544 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 MH422554 Escherichia phage P1, complete genome 36884-36911 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NC_050152 Enterobacteria phage P7, complete genome 45367-45394 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NC_005856 Enterobacteria phage P1, complete genome 42517-42544 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 8335-8362 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NC_042128 Escherichia phage RCS47, complete genome 47195-47222 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 MH445381 Escherichia virus P1, complete genome 6560-6587 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 AF234172 Enterobacteria phage P1 mod749::IS5 c1.100 mutant, complete genome 42517-42544 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_KX880944 Escherichia coli strain pMCR-1-P3 plasmid pMCR-1-P3, complete sequence 19931-19958 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP045829 Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence 29119-29146 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_LT905089 Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1 5644-5671 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP034959 Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence 20238-20265 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP026725 Escherichia coli strain 266917_2 plasmid p266917_2_02, complete sequence 20378-20405 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP021729 Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence 392-419 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP021729 Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence 99674-99701 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP015997 Escherichia coli strain S51 plasmid pS51_2, complete sequence 87560-87587 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 MN232192 Escherichia coli plasmid pGD27-62, complete sequence 51372-51399 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP030183 Salmonella enterica strain SA20030575 plasmid pSA20030575.2, complete sequence 18792-18819 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP042617 Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence 123721-123748 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 48257-48284 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP022733 Escherichia coli strain SA186 plasmid pSA186_4, complete sequence 10776-10803 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 18957-18984 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP023381 Escherichia coli strain 127 plasmid p91, complete sequence 19014-19041 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP023381 Escherichia coli strain 127 plasmid p91, complete sequence 19116-19143 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 MF510496 Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence 53060-53087 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP052881 Escherichia coli strain C21 plasmid pC21-4, complete sequence 19551-19578 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP040069 Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence 18722-18749 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 69591-69618 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP034164 Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-2, complete sequence 85164-85191 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP041630 Escherichia coli strain PE15 plasmid pPE15-92K, complete sequence 18651-18678 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP041922 Escherichia coli strain Ec40743 plasmid unnamed3, complete sequence 14351-14378 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 1850-1877 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP033848 Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence 94318-94345 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP026938 Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence 4216-4243 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 27570-27597 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP031654 Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence 20238-20265 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MK419152 Escherichia coli strain D72C plasmid pD72C, complete sequence 121420-121447 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MH844525 Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence 55999-56026 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MH781719 Klebsiella pneumoniae strain SCKLB684 plasmid pSCKLB684-mcr, complete sequence 23606-23633 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MK256965 Escherichia coli strain R15 plasmid pR15_MCR-1, complete sequence 18791-18818 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MG825379 Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence 21688-21715 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MG288678 Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence 22882-22909 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP027199 Escherichia coli strain WCHEC025943 plasmid p1_025943, complete sequence 19019-19046 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 AF035607 Bacteriophage P1 structural lytic transglycosylase (orf47), pep44b (orf44b), pep44a (orf44a), and pep43 (orf43) genes, complete cds; and pep42 (orf42) gene, partial cds 2323-2350 0 1.0
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP010173 Escherichia coli strain H8 plasmid A, complete sequence 20272-20299 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP010173 Escherichia coli strain H8 plasmid A, complete sequence 20323-20350 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP020522 Escherichia coli strain 190 plasmid unnamed3, complete sequence 18265-18292 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP029103 Escherichia coli strain AR437 plasmid unnamed1, complete sequence 82071-82098 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP023896 Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence 74436-74463 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP034959 Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence 20289-20316 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP040069 Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence 18773-18800 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP031654 Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence 20289-20316 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP027199 Escherichia coli strain WCHEC025943 plasmid p1_025943, complete sequence 19070-19097 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 72373-72400 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 72424-72451 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 41862-41889 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_KX518745 Escherichia coli strain HYEC7 plasmid pHYEC7-mcr1, complete sequence 19920-19947 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 LC511659 Escherichia coli 2017.15.03CC plasmid p2017.15.03CC DNA, complete genome 19856-19883 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_KU980950 Escherichia coli strain WE-0250 plasmid U2501, complete sequence 10776-10803 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP009168 Escherichia coli 1303 plasmid p1303_95, complete sequence 19120-19147 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MK410117 Escherichia coli strain Ec-20Lar plasmid unnamed, complete sequence 19123-19150 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_MK455768 Escherichia coli strain Ec-2Lar plasmid pY-Ec2, complete sequence 19123-19150 1 0.964
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP023381 Escherichia coli strain 127 plasmid p91, complete sequence 19065-19092 2 0.929
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 11731-11758 2 0.929
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP053046 Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence 103329-103356 2 0.929
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP038378 Escherichia coli O157:H7 strain F1273 plasmid pF1273-3, complete sequence 9609-9636 2 0.929
NZ_CP029103_1 1.1|82122|28|NZ_CP029103|CRISPRCasFinder 82122-82149 28 NZ_CP038288 Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-2, complete sequence 21279-21306 2 0.929

1. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

2. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_KX928752 (Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

3. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

4. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP019188 (Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 plasmid pATCC10729_02, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

5. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP010173 (Escherichia coli strain H8 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

6. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP020522 (Escherichia coli strain 190 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

7. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP047090 (Salmonella sp. S13 plasmid pS13-1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

8. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

9. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP009051 (Escherichia coli NCCP15648 plasmid p15648-1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

10. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP039843 (Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_1) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

11. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

12. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP035313 (Escherichia coli strain D72 plasmid pD72-mcr1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

13. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP029103 (Escherichia coli strain AR437 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

14. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_AP018809 (Escherichia coli strain E2865 plasmid pE2865-1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

15. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP023732 (Escherichia coli strain FORC 064 plasmid pFORC64.1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

16. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP023896 (Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

17. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP046005 (Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

18. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP030784 (Escherichia albertii strain 2012EL-1823B plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

19. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NC_017653 (Escherichia coli O55:H7 str. RM12579 plasmid p12579_1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

20. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP019054 (Escherichia coli strain CRE1540 plasmid p1540-3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

21. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP028125 (Escherichia coli O26 str. RM10386 plasmid pRM10386-1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

22. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

23. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP037905 (Escherichia coli strain LHM10-1 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

24. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP016549 (Escherichia coli strain O177:H21 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

25. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP016549 (Escherichia coli strain O177:H21 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

26. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

27. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MG196293 (Escherichia coli strain SDX5C133 plasmid pHNSD133T1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

28. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

29. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to MH160767 (Escherichia phage vB_EcoM-Ro157c2YLVW, complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

30. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to AF234173 (Enterobacteria phage P1 mod1902::IS5 c1.100 rev dmt(del)MB mutant, complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

31. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

32. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

33. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NC_005856 (Enterobacteria phage P1, complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

34. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

35. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NC_042128 (Escherichia phage RCS47, complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

36. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

37. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to AF234172 (Enterobacteria phage P1 mod749::IS5 c1.100 mutant, complete genome) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

38. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_KX880944 (Escherichia coli strain pMCR-1-P3 plasmid pMCR-1-P3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

39. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP045829 (Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

40. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_LT905089 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

41. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP034959 (Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

42. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP026725 (Escherichia coli strain 266917_2 plasmid p266917_2_02, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

43. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

44. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

45. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP015997 (Escherichia coli strain S51 plasmid pS51_2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

46. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to MN232192 (Escherichia coli plasmid pGD27-62, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

47. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP030183 (Salmonella enterica strain SA20030575 plasmid pSA20030575.2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

48. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

49. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

50. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP022733 (Escherichia coli strain SA186 plasmid pSA186_4, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

51. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

52. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP023381 (Escherichia coli strain 127 plasmid p91, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

53. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP023381 (Escherichia coli strain 127 plasmid p91, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

54. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to MF510496 (Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

55. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP052881 (Escherichia coli strain C21 plasmid pC21-4, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

56. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP040069 (Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

57. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

58. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP034164 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

59. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP041630 (Escherichia coli strain PE15 plasmid pPE15-92K, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

60. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP041922 (Escherichia coli strain Ec40743 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

61. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

62. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

63. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP026938 (Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

64. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

65. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP031654 (Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

66. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MK419152 (Escherichia coli strain D72C plasmid pD72C, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

67. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MH844525 (Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

68. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MH781719 (Klebsiella pneumoniae strain SCKLB684 plasmid pSCKLB684-mcr, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

69. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MK256965 (Escherichia coli strain R15 plasmid pR15_MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

70. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MG825379 (Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

71. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MG288678 (Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

72. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP027199 (Escherichia coli strain WCHEC025943 plasmid p1_025943, complete sequence) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

73. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to AF035607 (Bacteriophage P1 structural lytic transglycosylase (orf47), pep44b (orf44b), pep44a (orf44a), and pep43 (orf43) genes, complete cds; and pep42 (orf42) gene, partial cds) position: , mismatch: 0, identity: 1.0

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagt	Protospacer
****************************

74. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP010173 (Escherichia coli strain H8 plasmid A, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

75. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP010173 (Escherichia coli strain H8 plasmid A, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

76. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP020522 (Escherichia coli strain 190 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

77. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP029103 (Escherichia coli strain AR437 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

78. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP023896 (Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

79. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP034959 (Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

80. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP040069 (Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

81. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP031654 (Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

82. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP027199 (Escherichia coli strain WCHEC025943 plasmid p1_025943, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

83. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

84. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

85. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

86. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_KX518745 (Escherichia coli strain HYEC7 plasmid pHYEC7-mcr1, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

87. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to LC511659 (Escherichia coli 2017.15.03CC plasmid p2017.15.03CC DNA, complete genome) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactctggagc	Protospacer
***************************.

88. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_KU980950 (Escherichia coli strain WE-0250 plasmid U2501, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactccggagt	Protospacer
**********************.*****

89. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP009168 (Escherichia coli 1303 plasmid p1303_95, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactccggagt	Protospacer
**********************.*****

90. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MK410117 (Escherichia coli strain Ec-20Lar plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactccggagt	Protospacer
**********************.*****

91. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_MK455768 (Escherichia coli strain Ec-2Lar plasmid pY-Ec2, complete sequence) position: , mismatch: 1, identity: 0.964

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagcttttaactccggagt	Protospacer
**********************.*****

92. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP023381 (Escherichia coli strain 127 plasmid p91, complete sequence) position: , mismatch: 2, identity: 0.929

tattaaccggagcttttaactctggagt	CRISPR spacer
tcttaaccggagcttttaactctggagc	Protospacer
* *************************.

93. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 2, identity: 0.929

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggaacttttgactctggagt	Protospacer
***********.*****.**********

94. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 2, identity: 0.929

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggagtttttaactctggcgt	Protospacer
************.************ **

95. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP038378 (Escherichia coli O157:H7 strain F1273 plasmid pF1273-3, complete sequence) position: , mismatch: 2, identity: 0.929

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggaacttttgactctggagt	Protospacer
***********.*****.**********

96. spacer 1.1|82122|28|NZ_CP029103|CRISPRCasFinder matches to NZ_CP038288 (Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-2, complete sequence) position: , mismatch: 2, identity: 0.929

tattaaccggagcttttaactctggagt	CRISPR spacer
tattaaccggaacttttgactctggagt	Protospacer
***********.*****.**********

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 6 : 89486 84 Escherichia_phage(62.5%) tail,portal,holin,terminase,plate,integrase,lysis,head attL 11275:11291|attR 63231:63247
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP029104
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 16429 : 22265 8 Escherichia_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP029107
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 12690 : 52720 35 Escherichia_phage(50.0%) protease,integrase,transposase attL 45083:45099|attR 62884:62900
DBSCAN-SWA_2 84590 : 92970 13 Stx2-converting_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage