CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP021086	Lactiplantibacillus plantarum strain plantarum chromosome, complete genome	2 crisprs	csa3,cas3,DEDDh,DinG,WYL	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021086_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021086_1

108992-109189

Orphan

Consensus_repeat	Method
GGCCGACGTTGCACTCTGGCTCGTCGTGCTAGTGACTGAACTAGCACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021086_1

>merge|NZ_CP021086|1|108992-109189|CRISPRCasFinder
GGTTACCGTTGTACTTTGACTAGCCGCACTTTTTACTGAACTAGCACTGGCTTGAGTAGTACTGCTTTGGCTAGCGGCCGACGTTGCACTCTGGCTCGTCGTGCTAGTGACTGAACTAGCACTGGCTTGACTAGTACTACTTTGGCTAGTGGCCGACGTTGCACTCTGGCTCGTCGTACTAGTGACTGAACTAGCACT

>NZ_CP021086|1|1|108992-109189|CRISPRCasFinder
GGTTACCGTTGTACTTTGACTAGCCGCACTTTTTACTGAACTAGCACT	GGCTTGAGTAGTACTGCTTTGGCTAGCGGCCGACGTTGCACTCTGGCTCGTCGTGCTAGTGACTGAACTAGCACTGGCTTGACTAGTACTACTTTGGCTAGT
GGCCGACGTTGCACTCTGGCTCGTCGTACTAGTGACTGAACTAGCACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021086.1\|WP_108725327.1\|104031_104775_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|226674
NZ_CP021086.1\|WP_164883047.1\|116633_117197_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP021086.1\|WP_072533650.1\|111461_113006_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340855
NZ_CP021086.1\|WP_108725326.1\|97856_98558_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP021086.1\|WP_003644756.1\|107955_108456_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|223427
NZ_CP021086.1\|WP_108725331.1\|113002_114511_+\|accessory-Sec-system-glycosyltransferase-Asp1	unknown	unknown	gnl\|CDD\|340855
NZ_CP021086.1\|WP_053566887.1\|117255_117756_-\|DUF4811-domain-containing-protein	unknown	unknown	gnl\|CDD\|374344
NZ_CP021086.1\|WP_108725329.1\|106132_107032_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226631
NZ_CP021086.1\|WP_003642129.1\|103697_104018_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP021086.1\|WP_108725328.1\|104922_106140_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224582
NZ_CP021086.1\|WP_003642119.1\|114595_115423_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP021086.1\|WP_003644760.1\|103265_103664_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380361
NZ_CP021086.1\|WP_021356835.1\|102658_103093_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP021086.1\|WP_085776199.1\|98551_101143_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NZ_CP021086.1\|WP_003642118.1\|115539_116550_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_CP021086.1\|WP_085776198.1\|101223_102486_+\|ArgE/DapE-family-deacylase	unknown	unknown	gnl\|CDD\|181490
NZ_CP021086.1\|WP_066011162.1\|110169_111153_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|371045
NZ_CP021086.1\|WP_108725332.1\|117752_119237_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP021086.1\|WP_108725664.1\|120266_121454_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP021086.1\|WP_072533647.1\|122375_122552_+\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200

Protein	Function_ID	Function_description	E-value
NZ_CP021086.1\|WP_108725327.1\|104031_104775_+\|SDR-family-oxidoreductase	gnl\|CDD\|226674	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only].	4.93091e-97
NZ_CP021086.1\|WP_164883047.1\|116633_117197_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	5.41748e-25
NZ_CP021086.1\|WP_072533650.1\|111461_113006_+\|glycosyltransferase	gnl\|CDD\|340855	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.	1.37452e-92
NZ_CP021086.1\|WP_108725326.1\|97856_98558_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	2.00416e-102
NZ_CP021086.1\|WP_003644756.1\|107955_108456_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.72955e-47
NZ_CP021086.1\|WP_108725331.1\|113002_114511_+\|accessory-Sec-system-glycosyltransferase-Asp1	gnl\|CDD\|340855	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.	1.59996e-80
NZ_CP021086.1\|WP_053566887.1\|117255_117756_-\|DUF4811-domain-containing-protein	gnl\|CDD\|374344	pfam16069, DUF4811, Domain of unknown function (DUF4811). This family of proteins is found in bacteria. Proteins in this family are typically between 188 and 241 amino acids in length. There is a single completely conserved residue Y that may be functionally important.	8.3105e-41
NZ_CP021086.1\|WP_108725329.1\|106132_107032_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226631	COG4152, COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	1.535e-135
NZ_CP021086.1\|WP_003642129.1\|103697_104018_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	7.7214e-25
NZ_CP021086.1\|WP_108725328.1\|104922_106140_-\|ABC-transporter-permease	gnl\|CDD\|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	4.5196e-34
NZ_CP021086.1\|WP_003642119.1\|114595_115423_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	6.66516e-33
NZ_CP021086.1\|WP_003644760.1\|103265_103664_+\|cupin-domain-containing-protein	gnl\|CDD\|380361	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain. This family includes archaeal, eukaryotic, and bacterial proteins homologous to hydroxynitrile lyase from Granulicella tundricola (GtHNL), a novel class of HNLs that does not show any sequence or structural similarity to any other HNL and does not contain conserved motifs typical of HNLs. HNLs comprise a diverse group of enzymes that vary in terms of their substrate specificity, enantioselectivity and the need for a co-factor. In plants, they catalyze the reversible cleavage of cyanohydrins, yielding HCN and aldehydes or ketones. Also included in this family is TM1010 from Thermotoga maritima, a protein of unknown function. Some but not all members of this family have N- or C-terminal carboxymuconolactone decarboxylase domains in addition to the cupin domain. Members of this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	8.25352e-52
NZ_CP021086.1\|WP_021356835.1\|102658_103093_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.09879e-48
NZ_CP021086.1\|WP_085776199.1\|98551_101143_+\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	3.18012e-15
NZ_CP021086.1\|WP_003642118.1\|115539_116550_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	3.10527e-67
NZ_CP021086.1\|WP_085776198.1\|101223_102486_+\|ArgE/DapE-family-deacylase	gnl\|CDD\|181490	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed.	0
NZ_CP021086.1\|WP_066011162.1\|110169_111153_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|371045	pfam10428, SOG2, RAM signalling pathway protein. SOG2 proteins in Saccharomyces cerevisiae are involved in cell separation and cytokinesis.	1.12691e-06
NZ_CP021086.1\|WP_108725332.1\|117752_119237_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.58807e-94
NZ_CP021086.1\|WP_108725664.1\|120266_121454_+\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.93788e-65
NZ_CP021086.1\|WP_072533647.1\|122375_122552_+\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	3.72906e-11

>NZ_CP021086.1|WP_003644756.1|107955_108456_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MHLTLTQTTINQQTYWLGTTPTGLAFVGRANGPRDEWQAFFKSANIHYDQQANQQACQELHDYLTGQRQHFDIPLDQTTGTPLQHQVWQALTRIPYGQTATYSQLATMINHPTAVRAVASAVGQNPLLIVIPCHRIRRKDGQLGGYRGGLPMKRALLALENARLPK
>NZ_CP021086.1|WP_108725329.1|106132_107032_-|ABC-transporter-ATP-binding-protein
MLSIAHIQKRFGTVQALNDVSFDVHDGEIMGLIGQNGAGKSTTFHSILNFLSFDGQITWNGQPLTADDYDQIGYLPEERSLMSKLTITQQIVYLARLKNQPARVTKGKIAAWMKRFAVKGQPTDKIDKLSKGNQQKVQLICTLIHDPKLIILDEPFSGLDPVNADLLKQAILDAKQRGAAIIFSSHDMSNVEAICDSLVMLRNSEAVLKGTVEDVRAQFGRTRLFLTTDWSQAQLADLPGVTTVTQQGARRFRLELADASVGPAIFDQVTAGHYIEEFSQQPPTLDEIFRTEAGGVNHE
>NZ_CP021086.1|WP_108725328.1|104922_106140_-|ABC-transporter-permease
MNKTWIVTFETYLRQIKSWSFLSLVFMPFLFFGLVAAFSYFAAPSASKNDIAVVSTSPQLRTSFIKQSHVATANKYQTLASAKAATKRNDIAGYLVLTTKNQQLQAQFTGPNAVSSDDKAKIQQFLATAQSQRNVQRAQLSAKQTQALAVQPKFTEQLQKHAASDKTAKTVSFYIVVFFVYLILTTYSAITAQEIAADKGTKIMEVIFSSTTPRKYFNGKIYGVLLVIVTQLLVYLVGGFAVMQFVKRSSLTIDFWQQNTDLINQVIHNLVSINLLFALLAVLLYTVASAFCGALVTRVADASKAAQPVIYLSMLAFFMALAFQNTPTNLFVKIFSYIPFFSSYFMPLRLINGMATMPAAIVSLLILIATIIGSMIYIGRIYGGLMLQTDELGFWGNLKRGLRLK
>NZ_CP021086.1|WP_108725327.1|104031_104775_+|SDR-family-oxidoreductase
MTVKNKVVVITGASSGIGATTAKQLASNGAKVVLGARREERLAALIDEIKAAGGQAAYQVTDVTKSADVQALVKLAQTQFGGLDVIFNNAGIMPTSPISALHTDEWDQMVDINIKGVLNGVAAVMPIFTAQKSGQIITTSSVAGIKSFAGSGVYGATKFAVRNLMEVIRMESAQEGTNIRTVSLYPAAINTELLHTITDKTAKQNMTDFYQQVGISPAAVANVVNFAIDQPEDVNVNEFTIYPTKQA
>NZ_CP021086.1|WP_003642129.1|103697_104018_+|carboxymuconolactone-decarboxylase-family-protein
MTVKQTAGRDNLGKLAPQFAALNDDVLFGEVWARESALSLHDRSMITIACLMTSGDFPQLKAHFKMGKDHGISKDEAVEIVTHLAFYAGWPKAWSAMALIKEVYGE
>NZ_CP021086.1|WP_003644760.1|103265_103664_+|cupin-domain-containing-protein
MTTTNNSGLFGLGVKNEAYQQYFIGQSYLNALAGDEQVDVNVSNVTFEPGCRNNWHIHHNGYQILLVTSGEGWYQEAGKPAQLLHPGDVVTIHPGVKHWHGATKDSWFAHIAITKGTSEWLEPVDDEAYAKL
>NZ_CP021086.1|WP_021356835.1|102658_103093_-|MerR-family-transcriptional-regulator
MVRTTTERYSIGDFAKAVGLSAPTLRYYEKAGLIEPHRLDNGRRYYETADINWVKFLLHLKGTGMSISELQQYVTWRAAGDNTIPQRLALLKHVKEDFLVQFNEVQHHLQILNDKINWYEEKEAGITQDHEDFSSYLQRFGHHE
>NZ_CP021086.1|WP_085776198.1|101223_102486_+|ArgE/DapE-family-deacylase
MNGMAKTAQLEAAVQALSDIVKMNTVNNHEQLVADYLVTLLKQHGIEAQSIEYAPGRVNLVAEIGDGHGPVVALDGHEDTVALGDADKWHTDPLAATIKDNRLYGRGVTDMKAGLMAEVFAMIALHDQDAPLHGTVRLLATVGEEVDHLGAEQLTELGYADDIQTLICAEPSGADKQLLLTKSIQAMLGVDGDTAQRMADANPTTEQHFIELAHKGSLTYTIKAQGVAAHSSMPAIGQNAIDMLMTYYQKQTAYFDSFKTIVNPVLGPTVPVVTLISGGEQVNTVPASAEMSVKIRTIPELRNDRLIKDLEAIIAECNADGANLTMDIASSFYPVHTPEDSQLVQLAKKVGEQVLQQRLPYFGAPGGTDASSYIVKSPDMQVIVFGPGNITAHQVNEYVDLDMYGRFIEIYQKMITELLA
>NZ_CP021086.1|WP_085776199.1|98551_101143_+|ABC-transporter-permease
MVGAAMTAAYFKTIMREIWSSKARFASILLIIFLGVAFYTGIRATGPDMSQAANDYYAKQKLATNSVQSTMGLTKADTRVLNQHRSQLTYQATHYADVNQLNNSQVVRVMVLPTTQRLNRLRIVKGRLPRHANEIVLDAKAQRLQPKLKVGSTYRISSTAKRNAQFTRRTFKVVGFVNSPTYVENTNRGVTNVGKGTLDYLVYVRPQVIKSSVITRIDVQFKNLRGVTPYTAKYRRLNRENTAQLKRWLKPQARKRQQALQAQAQAKLKPLQQATQQLASQVPAGTAQLVKLQSQLKRAQAQVAAITMPTYLYTDRTDNPGYTEYHENTQRVVALSTVFPLFFIAIAALICLTTMTRMVEELRLQMGTLKALGYTNTAVGSEFMIYGGLAALIGTALGVLFGVNFFPRFIAQAYGSMYNLPAINVQYIWMDIGIALAIALLCTLGTALVVLRVDLNSLPAQLLQPRSPKAGKTLLLERWQWLWHRLSFNHKITLRNLFRYKQRLLMTVLGIAGCMAMMITGFGLKDSIGDISVKQFNELWHYDAVVTRSGNETDQQRQALSRGQLYQASLKLQAKQVTVKQSGVAEQTATLGIPAPHQSLSKFVVLRHRQSHQAIHIGDRGAVIDEKLAKLYGVQAGDDLTIKLAGQTTRRIHISAVAENYVNHFIYMSPTYYRRVFKQAPVYNTNYVRFKQATKKQENAYADRLLKQAGVQNVTLMSTEKATNFKMLDSMNLVVLIFVISAGALALVVLYNLTNINVSERIRELSTIKVLGFYDGEVTMYIFRENLILTVLGIIAGCFLGNWLHAYILQTAETNALMFSPTIHPLSYVYAALLTLAFSLLVMGMMHRKLKRVNMLDALKSVD
>NZ_CP021086.1|WP_108725326.1|97856_98558_+|ABC-transporter-ATP-binding-protein
MAYIEVQQATRQFKNGEQVTVANRDISFEVDQGAVVVILGPSGAGKSTLLNILGGMDSPTSGRVLVDGVDIAQFNSRQLTTYRRQAVGFVFQFYNLVPNLTARENVELASQITKDARDVDETLALVGLTHRADNFPAQLSGGEQQRVAIARAVAKNPKLLLCDEPTGALDYQTGKQVLQVIQDAAKQTQTTVIIVTHNSAIAQLGDQVIRINDAKVQSVEHNAHPTPLAEIEW
>NZ_CP021086.1|WP_066011162.1|110169_111153_-|LysM-peptidoglycan-binding-domain-containing-protein
MKIKNALLTSLAATGLLALGTTVANADTVVVKAGDTVSEIALTHKTTIKAIQKANHLKNVNLIYIGDKLEVNGKHHATTVTTQVPTSAASSTASSTSTASSTANSTSTQSASSAAVSSSTSTSAASTATSSSTTSVASSSAASSSSTSAASSSVTSTSTASAASSSATSSSTSSAASSSAASSSTSSATSSSATSQASTASSSTATSASMTKLSNTTASSAASTSTAASSSATTSSSTTTSTSSSSSTTSTSSSAEAAAKAWIANKESGGSYTASNGNYYGKYQLSKSLLNGDYSASNQETVADEYVASRYGSWVAAKAFWEANGYY
>NZ_CP021086.1|WP_072533650.1|111461_113006_+|glycosyltransferase
MYYFVNTSINPKKSGIEHAEMKRLALFNQHHVPAKMVTRFFSLSLHQTLTAAGIAAENQINLFDFIQHSSERPTIKMTIEDLHLAPDLRVQSVGRHYEVYQNDQLLMKVNTFLNTQKQLNNVQYYDQNGKLVKTDWYDTRGFKGLEQFYAADGQVASEQVFNPDGEVVYQTFHMADRQNQVQNSLYRFINYEGQDWSFAGETAMTTFFLDELNRRTPHAVFVIDRTYELAYAALHMRTKAFKVMHLHSNHVNDPAHPKTASLNFNYAYALNNLDQWNGVIASTKQQTADFQARFGNQPAVYTIPVGIVDDATLNAPKPSFDQRTAGKIIFVARLAEEKQQDQVIRAFKKVLAQVPNATLDFWGYANGDTGKQLHQLVEQLGLKAAVTFNDYTTDLTAVYNDAQLAMLTSRAEGFALALLEGQAHGVPQIAYDVKYGPRDIIRDGHDGQLVPVNDENALATAMIDLLTQPKKLAMYSQQAYQDAQRFSTTAVWQQWQPLMKAAADFYQVEGATQR
>NZ_CP021086.1|WP_108725331.1|113002_114511_+|accessory-Sec-system-glycosyltransferase-Asp1
MNFFVNQYLMALNSGVEHAEFKRLQLFKDHQAPAKLVTRQFDGLLHQNMRRFNIADDQIANLFDFFRETTRFSSRVIKMADLNWPTVYDIKPDPNVSEVRAGDRLVAKVHFVPSTVGHVYFIEIFDHFNNLVQRTDYDERGFKARDEFFSSAGEPITDIFYRPDGSRMAEQYYTHDNNGTNYVSLCHLINYHGRDYYFNGEQEWYRFFLDELNKQYDENNVFIADRPLSAQWPVVNMQTAAKKYLWLPTPHAVDPRDQVYSNLNNAYVYGLHEFLSAWDGVITSTEQQKQDLTQWLGGQPSVPILTISAAVVSKQQAQHAPIAISERHAHEIIYTGRLDAERRVDQLVTAFDQVHHKITDATLVIYGYGGELDRLKQQVSQLHLETAVTFAGYQPNLTMAYDQAGAYVYTGESDAQPLSLIEALSHGVPAIAYDINYGPKDVLKDGKNGYLVTDGAVNQLVRALTRTLESPQRQQRLSKGAYRSSEQYSDEQVWQQWQPVVQ
>NZ_CP021086.1|WP_003642119.1|114595_115423_-|LysR-family-transcriptional-regulator
MFKQLETFCAVYETRNFSHAAEQLFISQPTVSTQIKQLEADLQTTLLTRNGRQEIVPTASGQLLYQQAQKLLTTWAATKTAVQSPRHLVKVPCRIGASHTTGRLILPTLLANLSAVSDRFDFQVTLANSAEILTAMSQHKLDFGLVEKPLVTDQLNRLPFGHDELVHAGDFASPLWLLREPNSGVRHYTNAFLKARNIQPAQVMVIHSNQIIADLLAHGIGQTIISRHVLSNEIPIEQLSAHYQRQFFLLTNTQPAAALRPVQTAITQYLTTWSD
>NZ_CP021086.1|WP_003642118.1|115539_116550_+|putative-sulfate-exporter-family-transporter
MKVKGILPGLVTSLVIAIISQGLAQFVPALGAATIAILLGIIGGNTFLKQPQLGRGTKFAESKLLEYSVMLLGATMTVQTIGKIGGFGVLFILCQMTITIVGALWLGRKLGFSQSVRMLMAGGNAVCGSSAIASIAPVIDADEDDKGTVITLVNLMGTVLMLTLPVLGMAVFGGSVILKGALIGGTLQSVGQVVAAASMINQTTVQFATIFKIMRIMMLVVVVLIFGRLHQRTIENELAEDAVVSGNGNGHWLPWYVAGFLILCALNSLISLPAIIGATAHTISSWFEIIALAAIGLRLNLVNFMKAGKRLALYGLGVGTIQVVSALILITLLLQH
>NZ_CP021086.1|WP_164883047.1|116633_117197_+|GNAT-family-N-acetyltransferase
MFMLTYRVTPAIELREPLPQSDAPALLALLTANRAQYQYYLPWVAKIQTVADEQRFLTFAQAQLQQAQALNLVIVVEQRVAGMVSCDHFDDNDHSANIGYWLGRPFQGRGVMTAAVRGVCDLSFNQYHRQCLRIRAAVDNQASNAVAQRTGFDFLIQHPGGQHLLDGDHDENVYQVSAVDWLAKRHK
>NZ_CP021086.1|WP_053566887.1|117255_117756_-|DUF4811-domain-containing-protein
MIIVLLILATFVFAGTMIFSPAGRNRLIAIIISGLIIATSLIALVLNDNYHWGMHEVTRTQIQDLAPLKSKQVALRVQQLGTGSERVISYRVVAATKVSHTVTATTTTTKLTSGSPAQVQLKTTTWQFKNHLTHVLFSLGNTKTKIVQRQYLFTIPKTWQVVTVKN
>NZ_CP021086.1|WP_108725332.1|117752_119237_-|multidrug-efflux-MFS-transporter
MPTQNSTLPLDANGQPYHRTWLVLTLLVGTFTTFITQTLLTTAFPTLMADFHISATAVQWLTTGFMLIMGIMIPVSAWLLTRINSKYLYLTAMLIFGLGTTLAYFAVNFQMLLIARMIQAMGVGISAPVFQTIMSSVYPPEKRGSAMGTAGIVIGLAPAIGPTLSGWIIDNYSWRALFLFILPINILVIIVSFFTLRKVLPTSKQPIDWWSVLISTIGFGSMLYGFSSVGNAGWGDPVVLTTLVIGLIFIGLFVWRQLHMDQPLLELRVFKIPAFTLSAILTALAYMAMMGVEMILPMYIQTVLGRSAMDSGLILLPGAIMMGIMSPITGRIFDHIGARRLAMTGMLLLTLGTAFFLSISATTPILWIIVVYAIRMFGLTMVTMPVTTTGINALPFRLISHGMAANNTLRQVAASMGTAVLISVYSSIAKWQMPGHQLLTQAPLKYRQDGITATLTGYHMAFVVSLIFCAIGFGITFFLKANHSKTISQEDDAA
>NZ_CP021086.1|WP_108725664.1|120266_121454_+|MFS-transporter
MNSKSLNKSTVLLMAISAAIVVANINYIQPIEVDIAQQFNLPNAIIGAVAMLTQLGYAFGLLLIVPMGDIMNRRMLIMRLLVLAIISALLAFVAPNIWVYALASLLIGITSVAPQVIIPYAGFLAPRNQRGQVLGNVLSGLLVGVLLSRTVSGVLASYLPWQMVYLIAAILIAGLWLVFWRKLPHDPVTTHTTNYKAMIQTVPQLVKRYPVLRASAVNGFVLFGVSNIFWATLVFYLQHQYGWGSREAGLLALLGVTGVLAAPLIGRLADRFRPRTIIGLGLVLSTLAYVVFWLSGTHLVGLIIGIVILDLGTQFGQVANQTRIQSIDVHASSRFNSVFMFGYFMGGALGSFCGNVLWDLAGWNGVYGLAVVVLMIGFYAHFVHYPRVVTRQAQH
>NZ_CP021086.1|WP_072533647.1|122375_122552_+|PspC-domain-containing-protein
MALRKSRKDRILLGVCGGIAECFQTSSTLVRLVFFFGGGIFFWIYLYLSYKLPEDEYL

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Crispr_ID: NZ_CP021086_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021086_2

823273-823574

Orphan

Consensus_repeat	Method
GCTACTGCTAAGGCTCAAAGTACAGCTGACAATGCGTTTAGCCAAGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP021086_2

>merge|NZ_CP021086|2|823273-823574|CRISPRCasFinder
AAGATTATCAATGCTCAAAATACGGCTGATAATGCGGCTAGCCAAGCAGGAAATGCTGATAGCGCTGCTTTAATTGCACAGTCTACAGCGAATGCCGCTAAATCAGCCGCAGATAGCAATTACAACTACGCCAATTCAGAAATAGCCGTCCAGTCTAATGCTACTGCTAAGGCTCAAAGTACAGCTGACAATGCGTTTAGCCAAGCTCAGGCAGTTGGTAGCCAAGCTAGTGCTGGGATAAGCAACAACTCTACAGCTACTGCTAAGGCTCAAAGTACAGCTGATAATGCGTTTAGCCAAGC

>NZ_CP021086|2|2|823273-823574|CRISPRCasFinder
AAGATTATCAATGCTCAAAATACGGCTGATAATGCGGCTAGCCAAGC	AGGAAATGCTGATAGCGCTGCTTTAATTGCACAGTCTACAGCGAATGCCGCTAAATCAGCCGCAGATAGCAATTACAACTACGCCAATTCAGAAATAGCCGTCCAGTCTAAT
GCTACTGCTAAGGCTCAAAGTACAGCTGACAATGCGTTTAGCCAAGC	TCAGGCAGTTGGTAGCCAAGCTAGTGCTGGGATAAGCAACAACTCTACA
GCTACTGCTAAGGCTCAAAGTACAGCTGATAATGCGTTTAGCCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021086.1\|WP_085776083.1\|820838_823208_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|273743
NZ_CP021086.1\|WP_108725411.1\|810788_811127_+\|phage-gp6-like-head-tail-connector-protein	unknown	unknown	gnl\|CDD\|153446
NZ_CP021086.1\|WP_044430944.1\|837297_837870_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP021086.1\|WP_108725413.1\|811462_811903_+\|phage-tail-protein	unknown	unknown	unknown
NZ_CP021086.1\|WP_108725417.1\|827163_828336_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|119377
NZ_CP021086.1\|WP_108725412.1\|811110_811473_+\|phage-head-closure-protein	unknown	unknown	gnl\|CDD\|273692
NZ_CP021086.1\|WP_016058340.1\|825982_826237_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021086.1\|WP_016058334.1\|813123_813507_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021086.1\|WP_063487076.1\|811899_812283_+\|DUF806-family-protein	unknown	unknown	unknown
NZ_CP021086.1\|WP_003644510.1\|828335_828599_+\|hemolysin-XhlA-family-protein	unknown	unknown	gnl\|CDD\|371241
NZ_CP021086.1\|WP_016058333.1\|812283_812922_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|309671
NZ_CP021086.1\|WP_016058344.1\|828611_829142_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227833
NZ_CP021086.1\|WP_085776080.1\|835961_837146_+\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_CP021086.1\|WP_016058335.1\|813503_813695_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021086.1\|WP_016058341.1\|826240_826402_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021086.1\|WP_108725415.1\|819002_820775_+\|phage-tail-family-protein	unknown	unknown	gnl\|CDD\|368574
NZ_CP021086.1\|WP_108725414.1\|813707_818930_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|380090
NZ_CP021086.1\|WP_044430948.1\|835189_835981_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP021086.1\|WP_003561746.1\|833163_834339_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP021086.1\|WP_044430952.1\|830379_831591_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843

Protein	Function_ID	Function_description	E-value
NZ_CP021086.1\|WP_085776083.1\|820838_823208_+\|phage-tail-protein	gnl\|CDD\|273743	TIGR01665, structural_protein, phage minor structural protein, N-terminal region. This model represents the conserved N-terminal region, typically from about residue 25 to about residue 350, of a family of uncharacterized phage proteins 500 to 1700 residues in length. [Mobile and extrachromosomal element functions, Prophage functions].	4.75257e-13
NZ_CP021086.1\|WP_108725411.1\|810788_811127_+\|phage-gp6-like-head-tail-connector-protein	gnl\|CDD\|153446	cd08054, gp6, Head-Tail Connector Protein gp6 of Bacteriophage HK97 and similar proteins. The bacteriophage HK97 gp6 protein is critical in the assembly of the connector, a specialized structure that serves as an interface for head and tail attachment, as well as a point at which DNA exits the head during infection by the bacteriophage. It forms a dodecameric ring structure that comprises the middle ring of the connector, located between the portal protein (attached to the head) and the gp7 ring (attached to the tail). It is a component of the mature phage and the absence of HK97 gp6 results in defective head-tail joining and the absence of mature phage particles. Although the crystal structure of HK97 gp6 shows an unexpected 13-mer ring, the biological form present in the mature phage is believed to be a dodecamer.	4.48575e-19
NZ_CP021086.1\|WP_044430944.1\|837297_837870_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	0.00017223
NZ_CP021086.1\|WP_016058333.1\|812283_812922_+\|phage-tail-protein	gnl\|CDD\|309671	pfam04630, Phage_TTP_1, Phage tail tube protein. This is a family of phage tail tube proteins from Myoviridae.	6.73485e-69
NZ_CP021086.1\|WP_003644510.1\|828335_828599_+\|hemolysin-XhlA-family-protein	gnl\|CDD\|371241	pfam10779, XhlA, Haemolysin XhlA. XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes. This family has had DUF1267, pfam06895, merged into it.	4.53032e-09
NZ_CP021086.1\|WP_108725412.1\|811110_811473_+\|phage-head-closure-protein	gnl\|CDD\|273692	TIGR01563, hypothetical_protein_AGR_C_1752, phage head-tail adaptor, putative, SPP1 family. This family describes a small protein of about 100 amino acids found in bacteriophage and in bacterial prophage regions. Examples include gp9 of phage HK022 and gp16 of phage SPP1. This minor structural protein is suggested to be a head-tail adaptor protein (although the source of this annotation was not traced during construction of this model). [Mobile and extrachromosomal element functions, Prophage functions].	1.73626e-07
NZ_CP021086.1\|WP_108725417.1\|827163_828336_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|119377	cd06415, GH25_Cpl1-like, Cpl-1 lysin (also known as Cpl-9 lysozyme / muramidase) is a bacterial cell wall endolysin encoded by the pneumococcal bacteriophage Cp-1, which cleaves the glycosidic N-acetylmuramoyl-(beta1,4)-N-acetylglucosamine bonds of the pneumococcal glycan chain, thus acting as an enzymatic antimicrobial agent (an enzybiotic) against streptococcal infections. Cpl-1 belongs to the CP family of lysozymes (CPL lysozymes) which includes the Cpl-7 lysin. Cpl-1 has a glycosyl hydrolase family 25 (GH25) catalytic domain with an irregular (beta/alpha)5-beta3 barrel and a C-terminal cell wall-anchoring module formed by six similar choline-binding repeats (ChBr's). The ChBr's facilitate the anchoring of Cpl-1 to the choline-containing teichoic acid of the pneumococcal cell wall. Other members of this domain family have an N-terminal CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain similar to that of the firmicute CHAP lysins and associated with endopeptidase activity. The Cpl-7 lysin is also included here as is LysB of Lactococcus phage, and the Mur lysin of Lactobacillus phage.	1.3932e-63
NZ_CP021086.1\|WP_016058344.1\|828611_829142_+\|hypothetical-protein	gnl\|CDD\|227833	COG5546, COG5546, Small integral membrane protein [Function unknown].	0.000173645
NZ_CP021086.1\|WP_108725414.1\|813707_818930_+\|phage-tail-protein	gnl\|CDD\|380090	pfam18013, Phage_lysozyme2, Phage tail lysozyme. This domain has a lysozyme like fold. It is found in the tail protein of various phages probably giving them the ability to degrade the host cell wall peptidoglycan layer.	1.96066e-24
NZ_CP021086.1\|WP_085776080.1\|835961_837146_+\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	6.84015e-43
NZ_CP021086.1\|WP_044430952.1\|830379_831591_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	2.94457e-74
NZ_CP021086.1\|WP_108725415.1\|819002_820775_+\|phage-tail-family-protein	gnl\|CDD\|368574	pfam05709, Sipho_tail, Phage tail protein. This family consists of several Siphovirus and other phage tail component proteins as well as some bacterial proteins of unknown function.	2.76275e-06
NZ_CP021086.1\|WP_003561746.1\|833163_834339_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	7.70208e-110
NZ_CP021086.1\|WP_044430948.1\|835189_835981_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.55361e-97

>NZ_CP021086.1|WP_085776083.1|820838_823208_+|phage-tail-protein
MALNNQYLILDSNLKRIGTLTVDGATKFSNDSVKIQLADADTTSTSYDDDVNIGTQDNFNGTINLNAQSKKFDHQGSLDVLQGQPDSDKVVAGNNLAYYDALSGHWYVMRIYSVEESNTAATKHVTTANFTNLCLYTLAHHYPVAITASDSSIQTAFNQCFNATGWTLDYQTTNVMTPTITIDGKTKASTLVQTLIQAYNVEIDPYVEIDSQGNITKKVCVITDKLNTDVVYNEAVFGKNMTSIKRTTVSTPVTKLIAYGDNGNTMSEVNDGKPYIVDDAANQKYNPDWQSGLYYEAVITANSIEDPSGIKAWAEEMLQLYNHPRTYYEVSVTSKFNPPLGATIRFKDELIKPALNASGRVIQRTISFSNPYGNTVGFGEYVTVPVATPAWMQGYQSAINSAIEKAREDASSVKPVALTPDGNNFTDTAQTKRLILQAWEGNTNISAYIDNKGFIWHRYNTDGTLDTSFNQTGYLVQAAYNSVGTLHGTIETRYIQDEPEIKLKTSAIRSLGSFSPDDSTLGITEAAQYMCPLSNGQYITSRAINQSTTGDTMFVLHDTNFKPISKMIVSHGGHGSSFSIEEVSGAIYIWSATKPNLNVNEYAVSRIPYLANVTLGNDDDRITRFCTVDRYIRVSVDFKHGYVLCGYVNGKHDVLRLDEVKQGNYDVLYSFDVANYGFDESKQTYQSQGIDFPYVYFHSGDYNMKDPRMVYAVNVVHGGQEFASNYLLDMNLGLTDDVIEPETCNIIYSQTNQPELLVTFNCKYQGDSLERVFVIPIKERLPMNTISND
>NZ_CP021086.1|WP_108725415.1|819002_820775_+|phage-tail-family-protein
MSVLNKNDFEYAGLNSRDDLQAIMGAVTLPTAPAMAEQATDIPAMYGNQFNGMDYTSRTISIPITIIARGSQDKYNQIMHNLSGLLLSDDPSDNGKEYPLVFGFEPKVTYWGHITAISDPQFINQGAWDATLTITFVQSDPRATLPQVEKPLNNGLNTITVDGTARTEPVIQVIPKRDLKYIGFSLNGGQFGLGPESSGDQATATQPYTKVVDDPLGTMAMWTNDANAISNMKTGETYTYQGHSEIKTATNVMRPAVTSAGYDFGTIPTTGEDRWYGPAYRYTGMTNSLTDWRVRTGIHQFKYSGTHNGRAMGRVEVLLLDPNGNTIGRFGMRDMAYGAKPMARLQICEPGSTLEYGDHYTDLYYGSGPAGSFTNKPDQKIQIKTGTTTKTVTKYGRSKSGKVTKKTVNETVDTYTTVVNKEEDSALAGAWLMLDITKRGQVFTWSITQYSTKTGQPFLDPNIHMLVHGTYVDTQNKYQTALGGIGSVFLKHPITEDNYKIAYRNPFMSMTDLQIWQVNKVDTTKPTYIAGAGEEIVMDCESDTVTVNGKLVSPVWSTDFPKLKPGVNGLSMIGDLDDAQMALKYLPRIL
>NZ_CP021086.1|WP_108725414.1|813707_818930_+|phage-tail-protein
MATEKIQGYEFAINMDDGGMTRTLREIKNEAKLLKSGMQANFAEIRSGEGIMAAYAGKVKDAGRAIEAQRLVIERLKSEQNGLDQTTQKGREAYVKYENQINAAKRSIASLEGQQERAQKSLDLQKSGVLQLKDTTEISAKVTDSYVAKLKAEGHEFEANKVKASGLHQSYNELNKQLEAEQNRLNKIASASGNSSKEFKEQQIRVNELGTKIAQTRTKMRELDEQLSKKPQSGLTSVISQLNRVNEHVDKANHLFGKILGAHLVANGITSAFQSITSHIHEAISAGMEYEKEQQKMTATWLTLTGTVGKSNAMVKTINDLSVQTGQAVDVVNELEQGFYHLHSNKKESDELTKSMLNMSDAVGLDSQQIQAVTQDMVNGLSRGKANAGMLNQISQYFPMFREQLAKYESGLKKTGDTAASTGKGAAKAVSAYNKKMTLMFEGMHYGTNNSLSDLEKYRQKGIISAQQFTVFSKQIASGHKVTNAEIKQAIKVNSQYAAQQEANAQKTHESSKVTVADLNEMAKEGKISAKDIENTFNQLGSGKYDKAADNMLHTMVGMERTIKARVPALIGDIEKPILTAQNPIYGAVSKWVSDKRTDKEFNKVGVAAEKGISTITKAFAKAFDVKSAPKAMNDAMDNLAKGVTKASDSIAKNAPEIVNFFKTVKNLGGLGFETLIESLKITNALLKPLLSMVGGHTETIAKFGAAWWLTSKAVKETSSVLSTFKKISDTVSWAEKVLGIKQETKALEEQNAVLKTNAELSAASEENIGTGYRRVKGRKVGNIDADLSSISVEAENTEKIAKSSKWSLLGRTIGTRIINGAGLAMTAWDAGSSIAKAVSSGKASDKYKATGKTAGTLIGGGIGAALGSVIPGAGTAAGAMLGASIGDGVGGTKTANTIVKRISDALKGKSIEAPKIKTESTKRSLSDLGKAYSSYYSKKQKQDLNDVNVLHKAGMLTDAEYKKQLASIKKNDSETNRFEKMSASDRNAIAKYYAQQKASIISKWNARERKTSSSWDAKIASDERRFGANSIIVQKDMSKKKAAIQAEENKKSAALDKLRIKSATETTAQEARLHTTLTGKIKSAANKQNDILRNLAKSKGKITREQANDAISQSNKEYKKTVSLADQEYKDRVSAAEKQHNKVIKAAERQAREAISQAKSQYSKTVDAAKNQYSGNSKYAEKQRAAIISKAKDQKQKSIDNALEQENKTEQHADRQYKHTTDDADKQRSQVVKHAKDQNSSVVDQAKSQSKGVLGHAVKQANGSMKAADKQGSGIHSIWKNITSFFSNLVKGFGIKPINVGAYPSGYTPVSMGAYASGGIVGTARALVGEGGVEAKIDRDNGKVSFLGMNGAEVVNVKPGDQILNAGDTAKLFSGGLGHTLPGYAKGTIDIASFLKKIKNGATSIFDNVSDKAMDALSKITHPLKTLKSMALKTFDPTKTPGVGSIGHDLGKGIVDRALKGFAKAISDLADNFGGGVGNIKLSGSVASRARELARAFKHGYPASNNGGIAGVLGNWVIESNLTPTAIDPLDHGTGLGQWTFTRETALRSWLRKHGYAWDSAAGQINYALNEPGESSLLKSVLRMTNPTEAAYKFFATWESGGAMNGTGGLRESQASAVYRYIKGFENGGFGNKAGVYKLFEGNLPEAIVPMDLSKRSRAYQIMQQIMAKFGAQDGTNVMNTGNDQIDYNEAFKRQVIASLDALVAGQGDVKAVVANSDVVNAVKSNTKKTSQYSQMMGY
>NZ_CP021086.1|WP_016058335.1|813503_813695_+|hypothetical-protein
MIWQLDNFIQDIDYIANQLISQGILPSDFYQSSFSEMQTALNAKSRKDRVQDPLELARQIGAL
>NZ_CP021086.1|WP_016058334.1|813123_813507_+|hypothetical-protein
MAKSVKFDGKKIGTGTQYTLIDSGQNVEKMAEAYKKFIKTTEETEDSITGVVELTPKLAKVVAETTCDLLELNASQKKRVMSMEFSVSDEYDFFNDCLKQFLGVELPSVGNSSDQEEEEDPKLPKPE
>NZ_CP021086.1|WP_016058333.1|812283_812922_+|phage-tail-protein
MATLGLNMLYTGIKADDGSTVIDADKGLSAAGVYPIDTSKANGNLGTKTANITGLSGTVSKITGNNEVVDVSNPPSAPSVAIDSNEINFIVKQKLLGRVSDGKGGYSDTDKPVEAGLIIESRSPIFRTAIYYCFGRGIFNEAGQNIQTNTDTAETRDDDNLTFTALNYDGFGGQPYKVYAESDPKFDKQAMFDAVFPGQTFYKNASNGTSGQ
>NZ_CP021086.1|WP_063487076.1|811899_812283_+|DUF806-family-protein
MTPAAFIKSIIVANINEIPELAVEHIHSFFIPINDTSTDEPIVVISGLPERSQDYGNGIPFQSTKQVQIQLYYPKDYLGDMDAIESGLKQVLLTNDIRCYSDAGQTLTPDSESITNTLKFNYIKEAI
>NZ_CP021086.1|WP_108725413.1|811462_811903_+|phage-tail-protein
MANEIKHADSFEHILDTMAEGFGREEKLKANAAGADQFIKIMKPKIPVGKLRKVHGHAEKVHLRDSLIAVDHPNGSVNVGFTAKGEKGYIARFQNDGWDVVDRNGSKHSHVSGKHFWETTQREAKGQVGKAVVERLKTAMDKKVGK
>NZ_CP021086.1|WP_108725412.1|811110_811473_+|phage-head-closure-protein
MTKAINPARMNFRLEFGTQAATGKVNPNTGNPITDFVPQFSLYAGEWSLSFQQKLALNGDTSQQNAVYFVRHNLKIATGMQLRRNHQDVYQIDDVAYDDGLPPDGFDLITCHKVVIGRGE
>NZ_CP021086.1|WP_108725411.1|810788_811127_+|phage-gp6-like-head-tail-connector-protein
MAADLETLKSSLRIDSNDDDDLLKGYLSAAISYIKQAIGDDNSVLGFYEMVGVKDLFETAVYALAGSYWTYRTSITAIAVNPVDLVVDSIIGQLRGLYSQKQYEVGTNDESN
>NZ_CP021086.1|WP_016058340.1|825982_826237_+|hypothetical-protein
MDSILITNYKPDYTNNIMTISVQINTLGISSQVSITMDEFNTAIAGGAGGIDSVKLKVLNTLIDSLTALKPVTTTTTTTTTQEA
>NZ_CP021086.1|WP_016058341.1|826240_826402_+|hypothetical-protein
MNIDAQALINKMTSNYAQAIAVKDQQLAMAQVQIDQLNAKLAEKEAPKDGEDA
>NZ_CP021086.1|WP_108725417.1|827163_828336_+|LysM-peptidoglycan-binding-domain-containing-protein
MNKHKLKALILMMGAIFMAFLMVNVTSQASTSREQGVDWSKYNGNSGTFGYSTDKFVFSQAGGFYGGTNIPQTTYASQVKSAQQAGKRVHTYLWDGVGGNMTNAKAMMAYYLPRVRTPKGSIVALDYEDGASNSVTANTNVILAQMKLIKDAGYTPMLYSGKAYLNYHVNVSLILKAYGSCLWVPEYPDYLVRTSPDYNYFPSMDGVAIFQFTSMYKAGGLDGNVDLTGITKSGYTTASKKQAQTNVKQAQAAKKANFKVVKYNQRGVFYPNRTLAVRYTDSDKVSQVATYYKGESVTYNAVIIEHDYVWARYTRSNGLYAFIKLGVTNGHDYGKRVTGQLVSHTYYTVKSGDSWWTIAQRNGLSMTTLASQNGKSIYTTIYPGQRLVVR
>NZ_CP021086.1|WP_003644510.1|828335_828599_+|hemolysin-XhlA-family-protein
MAQYDDTTKLLMDIQKDVAATKTKVENIEEKLNQVDDIGDKADKALAKSIEASHQIDRVTTIQNWLIGVLVSGVLVTLVIYIAEKFL
>NZ_CP021086.1|WP_016058344.1|828611_829142_+|hypothetical-protein
MTKFLNVIQATLKANYKKPAYWAQIIGSVLIIGLAVATVFFGVKIDANAVVLVITAVGAILAFVGVITDNSILEDTGNTIKTKSSTLAYTEQTVVEALAEAQAKIEAANSAAASQAEAQASQAVVAAYSQAASAAAVGDTATASSAATLASSLAANLDTNAQPNAETTSESASQAS
>NZ_CP021086.1|WP_044430952.1|830379_831591_+|FtsW/RodA/SpoVE-family-cell-cycle-protein
MSNRELGRWQQHKHIGDYGWGIILCVIILCCVGMWAVYYACLHDLKVIDPVRTTMMQCLWYLVGALIATTMLHLSENQLMQWAPIGYSIGMLLLILLLVFYSREYYVQTGAKSWFAIGTLTFQPVEVMKPLYILMMGRLIVQDQQWGPHNNFNADWRLTRRLVIYTFPIIVALKIINDFGTTLVFLTIFIGMLIVSPCRFSFLWRVLLVAGSIGVVLILLATSSTGQSLLSHIGFKLYQFDRINTWLNPSNGVSDQSYQLWQSMRAVGVGGLTGNGITYNAVYVPVRESDMIFSVVGETTGFIGCSVLLIVYMYLFYLIFRSAFASRRRFYVYVSTGVAVMLAFHMFENIGMTIGLLPLTGIPLPFVSQGGSAIIGDFMGVGLVLATQYPNARSIFSVPRIFH
>NZ_CP021086.1|WP_003561746.1|833163_834339_-|IS256-family-transposase
MNELTTEIIAALAQKQDLDEVFRHHLEIAINQLLQTELAEFLGYERYSYAGINTGNNRNGSYERSFDTKYGQLNLTIPRDRNGRFENHTLPAYGRHSDNLETTVIQLYTKGITTAEIAELIEKMYGAHYSKATVSNMTKAVNEQVQAFQQRRLASQYAAIFLDATYLPLKRDTVQKEAVHIAIGIRPDGTKEVLNYQVAPTESTGIWTELLGTLIKQGVKDVLLFVADGLVGLDEGLNRHFPKAKRQRCLVHVGRNLMNKVRVKDRKAVISDFKQVHRAANREAAELKLNEFANNWHQTYPKLIKDLLKMPNLLTFMDFPPAIRQSLYSTNLIENFNKHLKRTTHHKEQFPTEDSLDRFLVSQFNVYNEKSLKRIHRGFKGLQDTLEASFI
>NZ_CP021086.1|WP_044430948.1|835189_835981_+|ABC-transporter-ATP-binding-protein
MKKAVLLDVDHVSKSFILSKQRQSELILEAVSLQVQTHQFISIIGSSGVGKSTLLRMIAGIIQPSYGVITFDGNLVTAPNRRMSMVFQNFALFPWLTVRQNIMFGLESQLNSDCQYVDTQIDNLINLIGLKGLENAYPYELSGGMKQRVGFARALAVEPELLLLDEPFSALDVLTGQRLGQDLITLWERRKFKMQAIVLITHNISEAVRLSDVIYVLGGKPAQIMNTYQIKTPRNQRTEQQIWVKTMAITDQFKRDMNEMRGD
>NZ_CP021086.1|WP_085776080.1|835961_837146_+|LCP-family-protein
MKCGGTEFMRRRQLPKWQRKRLIVLVTSCITFMLVAFTIQGIRLFDMLHSFHESRVIKSHHNLTQQPVSTFLLMGLDNSGKRKLSTTRTDGMMVVIVNHKTKTMTLCSLLRDTFVKIHSQQYHGYQRIESAYTYGGDAAAVATVEHYLNLPIDYYLTVNWDGFIRAIDDVGPVEVNVDRDFIGQDYWGKPEKFKAGLQSMSGARALAYARERHIDNDQHRGFRQQAVFYAMVKRLNQEGLSSKGAKVVGDLKDQMRTNLTDHDMLTLFKSRETFKRYQVKRLTFQWRTFDVAGRSMVEVYPDSCEQVSRQLQAAAGLRPDLPSQAFTTNGHYRYASDESVESKADEAKADTHYGQSHVYVGHAGNTTIGKLPTAVPLKNGFRVSDRTETMYTVH
>NZ_CP021086.1|WP_044430944.1|837297_837870_+|helix-turn-helix-domain-containing-protein
MVTEKLAIILGLEKTNLTKSTYFKACGIARSTFIKWQNFYMQDGLKGLKEQHNWTQYSSEIKRQAISVYLNDESSLWDIQIRFGLRSTRRLEDWINELLVHIMSRKTTFEERIRIVEYITVSEHAYSRAAKHFNVSYQQVRFWVFKTHANGYIALKDQLGRTKPIEEMTEVERLRLKKRQLKTQIKEQEV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

217492 : 226003

Synechococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003645861.1\|217492_217975_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.3e-16	41.0
WP_003642586.1\|217958_219089_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_003642587.1\|219091_219823_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4SM18	Cyanophage	1.6e-37	37.3
WP_003642588.1\|219824_220079_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_011101895.1\|220078_220759_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_085776174.1\|220751_222971_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.0e-143	39.1
WP_003642591.1\|222955_224410_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.5e-50	34.0
WP_003645866.1\|224406_225432_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.7e-59	41.0
WP_108725342.1\|225424_226003_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.6e-22	33.9

DBSCAN-SWA_2

405103 : 498462

101

Lactobacillus_phage(30.43%)

transposase,holin,tail,protease,integrase,head,capsid,terminase,portal

attL 428618:428632|attR 451549:451563

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072533580.1\|405103_406270_-\|integrase	site-specific integrase	A0A172LN96	Lactococcus_phage	1.6e-63	38.7
WP_072533579.1\|406324_407074_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_072533578.1\|407234_407420_+	hypothetical protein	NA	NA	NA	NA
WP_108725666.1\|407479_407746_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_072533577.1\|407791_408112_+	hypothetical protein	NA	NA	NA	NA
WP_061468368.1\|408222_408516_+	hypothetical protein	NA	NA	NA	NA
WP_027823003.1\|408535_409804_+	helicase	A0A2P0ZLC4	Lactobacillus_phage	1.5e-176	72.9
WP_072533576.1\|410077_410437_+	hypothetical protein	A0A1W6JQD5	Staphylococcus_phage	4.9e-16	32.2
WP_085776150.1\|410497_410929_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_072533574.1\|411810_412689_+	hypothetical protein	NA	NA	NA	NA
WP_011101810.1\|413387_414326_-	EamA family transporter	NA	NA	NA	NA
WP_003646616.1\|414522_414792_+	ACT domain-containing protein	NA	NA	NA	NA
WP_108725365.1\|414801_416145_+	PFL family protein	NA	NA	NA	NA
WP_003646617.1\|416517_417246_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-34	37.1
WP_108725366.1\|417242_418766_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_003642757.1\|419061_420243_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	1.0e-46	30.1
WP_003642758.1\|420477_421335_+	GRP family sugar transporter	NA	NA	NA	NA
WP_003642759.1\|421555_422908_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_003646619.1\|423333_423525_+	hypothetical protein	NA	NA	NA	NA
WP_003642761.1\|423929_425924_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.2e-32	41.3
WP_085776149.1\|425941_427519_+	glycosyltransferase	NA	NA	NA	NA
WP_108725367.1\|427490_429254_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-95	40.9
428618:428632	attL	NA	NA	NA	NA
WP_003639252.1\|430193_430337_+	hypothetical protein	NA	NA	NA	NA
WP_011101805.1\|430695_430839_+	hypothetical protein	NA	NA	NA	NA
WP_085776147.1\|431526_434076_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_085776146.1\|434175_436152_+	hypothetical protein	NA	NA	NA	NA
WP_003642771.1\|436206_436692_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_108725368.1\|436740_437013_-	hypothetical protein	NA	NA	NA	NA
WP_003642773.1\|437037_437271_-	hypothetical protein	NA	NA	NA	NA
WP_076633652.1\|437761_438919_-\|integrase	site-specific integrase	Q938N9	Temperate_phage	2.5e-53	34.3
WP_072534924.1\|438997_439642_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015640734.1\|439788_439968_+	helix-turn-helix domain-containing protein	E9LUT5	Lactobacillus_phage	4.3e-21	87.9
WP_072534925.1\|440248_440467_+	hypothetical protein	NA	NA	NA	NA
WP_108725369.1\|440463_441264_+	bifunctional DNA primase/polymerase	NA	NA	NA	NA
WP_072534927.1\|441263_442658_+	virulence protein	A0A0A7RTG3	Clostridium_phage	5.7e-68	33.4
WP_072534928.1\|442802_443282_+	hypothetical protein	NA	NA	NA	NA
WP_027823040.1\|443297_443489_+	hypothetical protein	NA	NA	NA	NA
WP_072535850.1\|443475_443814_+\|head	phage head closure protein	A0A2P0ZLF0	Lactobacillus_phage	7.1e-09	35.6
WP_072535851.1\|443806_444205_+	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	9.0e-19	44.7
WP_062690051.1\|444979_445453_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_108725370.1\|447308_448409_+\|portal	phage portal protein	A0A2H4J9Q5	uncultured_Caudovirales_phage	1.2e-49	34.9
WP_101831631.1\|448405_449947_+\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	3.3e-45	26.0
WP_108725371.1\|450062_450332_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_178138091.1\|450489_450861_+	hypothetical protein	NA	NA	NA	NA
WP_056988788.1\|451192_452053_-\|transposase	IS982 family transposase	NA	NA	NA	NA
451549:451563	attR	NA	NA	NA	NA
WP_003642774.1\|452629_452836_+	hypothetical protein	NA	NA	NA	NA
WP_063490409.1\|454429_455257_-	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_063490408.1\|455259_456054_-	hypothetical protein	NA	NA	NA	NA
WP_016511204.1\|456251_456428_-	hypothetical protein	A0A2P0ZL93	Lactobacillus_phage	3.9e-11	53.4
WP_022638129.1\|456805_457087_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_046811065.1\|457117_457477_-	hypothetical protein	NA	NA	NA	NA
WP_021356373.1\|457503_457881_-	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_013355756.1\|458526_459246_-	hypothetical protein	NA	NA	NA	NA
WP_058906840.1\|459352_459775_-	ImmA/IrrE family metallo-endopeptidase	A0A0S2SXM3	Bacillus_phage	1.1e-11	34.4
WP_013355754.1\|459789_460293_-	helix-turn-helix transcriptional regulator	S6C481	Thermus_phage	1.7e-22	42.6
WP_033099030.1\|460438_460693_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003642787.1\|460749_461064_-	hypothetical protein	NA	NA	NA	NA
WP_011101085.1\|461101_461338_-	helix-turn-helix transcriptional regulator	A0A0K2CNE2	Brevibacillus_phage	8.5e-09	30.7
WP_011101086.1\|461484_461685_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003642792.1\|461843_462014_+	hypothetical protein	NA	NA	NA	NA
WP_003642793.1\|462025_462331_+	DUF771 domain-containing protein	NA	NA	NA	NA
WP_033609664.1\|462398_462911_+	helix-turn-helix transcriptional regulator	D6PST4	Lactobacillus_phage	8.0e-28	43.5
WP_080467961.1\|463281_463662_+	hypothetical protein	NA	NA	NA	NA
WP_063488220.1\|463664_464552_+	recombinase RecT	E9LUM3	Lactobacillus_phage	5.9e-63	47.7
WP_187346154.1\|464583_465336_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A0P0IZH9	Lactobacillus_phage	3.1e-73	52.2
WP_060684052.1\|465417_465624_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003642799.1\|466070_466979_+	DnaD domain protein	NA	NA	NA	NA
WP_003642800.1\|466975_467263_+	hypothetical protein	NA	NA	NA	NA
WP_003642801.1\|467259_467778_+	hypothetical protein	O03915	Lactobacillus_phage	4.6e-39	54.6
WP_003642802.1\|467774_468149_+	hypothetical protein	NA	NA	NA	NA
WP_063490736.1\|468151_468463_+	hypothetical protein	A0A2P0ZLB4	Lactobacillus_phage	8.5e-49	91.3
WP_003642805.1\|468684_469146_+	transcriptional regulator	D6PSV8	Lactobacillus_phage	1.1e-39	57.0
WP_099447637.1\|469645_470476_+	abortive infection family protein	NA	NA	NA	NA
WP_108725667.1\|470735_471005_+	DUF2829 domain-containing protein	A0A0K2FLC4	Brevibacillus_phage	6.1e-11	42.0
WP_003642808.1\|471045_471924_+\|terminase	terminase small subunit	V5URT8	Oenococcus_phage	6.3e-57	50.2
WP_108725374.1\|471913_473152_+\|terminase	PBSX family phage terminase large subunit	M1PG09	Streptococcus_phage	3.5e-138	60.8
WP_108725375.1\|473163_474672_+\|portal	phage portal protein	V5US18	Oenococcus_phage	1.5e-135	51.8
WP_021356226.1\|474601_474898_+\|protease	ribosomal-processing cysteine protease Prp	D2J003	Enterococcus_phage	5.6e-10	39.2
WP_108725376.1\|475044_476730_+\|capsid	minor capsid protein	V5US81	Oenococcus_phage	3.1e-121	59.1
WP_003642815.1\|476704_476983_+	hypothetical protein	NA	NA	NA	NA
WP_003642816.1\|477034_477241_+	hypothetical protein	NA	NA	NA	NA
WP_033608829.1\|477413_478091_+	DUF4355 domain-containing protein	Q6SE80	Lactobacillus_prophage	1.1e-16	33.5
WP_003642818.1\|478105_478456_+	hypothetical protein	V5UTH9	Oenococcus_phage	5.8e-30	62.9
WP_108725377.1\|478475_479498_+\|capsid	major capsid protein	V5US24	Oenococcus_phage	8.2e-117	62.2
WP_003642820.1\|479510_479687_+	hypothetical protein	NA	NA	NA	NA
WP_024971556.1\|479698_480031_+\|head,tail	phage head-tail connector protein	V9QJ97	Oenococcus_phage	1.8e-12	45.3
WP_003642822.1\|480030_480378_+	hypothetical protein	V5US85	Oenococcus_phage	3.2e-36	62.3
WP_003642823.1\|480379_480931_+	HK97 gp10 family phage protein	V5URV0	Oenococcus_phage	3.3e-64	61.7
WP_003642824.1\|480930_481296_+	hypothetical protein	V5UQS4	Oenococcus_phage	3.0e-29	53.4
WP_099447638.1\|481397_481781_+\|tail	phage tail protein	V5USQ9	Oenococcus_phage	1.8e-37	58.4
WP_003642826.1\|481880_482279_+	hypothetical protein	V9QJA0	Oenococcus_phage	3.0e-46	74.8
WP_031275283.1\|482386_482650_+	hypothetical protein	V9QKH3	Oenococcus_phage	2.3e-23	65.4
WP_108725378.1\|482665_488497_+\|tail	phage tail protein	V5URV5	Oenococcus_phage	3.6e-225	40.8
WP_072539579.1\|488510_488873_+	hypothetical protein	V5UQS8	Oenococcus_phage	4.3e-44	71.2
WP_108725379.1\|488887_494248_+	hypothetical protein	Q6SE68	Lactobacillus_prophage	1.4e-143	59.4
WP_108725380.1\|494254_494437_+	hypothetical protein	NA	NA	NA	NA
WP_003561746.1\|494530_495706_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_003642832.1\|496066_496501_+	hypothetical protein	NA	NA	NA	NA
WP_050431034.1\|496679_497795_+	LysM peptidoglycan-binding domain-containing protein	O03950	Lactobacillus_phage	2.3e-32	77.4
WP_016511341.1\|497795_498092_+	hypothetical protein	A0A1I9KK55	Lactobacillus_phage	4.4e-39	77.6
WP_021356214.1\|498078_498462_+\|holin	holin	A0A2P0ZLG6	Lactobacillus_phage	1.1e-13	67.6

DBSCAN-SWA_3

786841 : 875526

Lactobacillus_phage(80.43%)

tRNA,transposase,tail,protease,integrase,head,capsid,terminase,portal

attL 779963:779980|attR 849927:849944

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
779963:779980	attL	NA	NA	NA	NA
WP_053338955.1\|786841_788005_-\|integrase	site-specific integrase	B4XYR4	Lactobacillus_phage	1.2e-55	36.5
WP_003561746.1\|788149_789325_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_064972032.1\|789581_790220_+	hypothetical protein	NA	NA	NA	NA
WP_108725407.1\|791467_792709_-	ribonuclease H-like domain-containing protein	A0A0A7RWA3	Clostridium_phage	9.0e-25	35.8
WP_003641360.1\|792769_793159_-	ImmA/IrrE family metallo-endopeptidase	D6PSS8	Lactobacillus_phage	4.6e-36	54.3
WP_072534799.1\|793189_793516_-	helix-turn-helix transcriptional regulator	A0A1B0Y2R0	Lactobacillus_phage	6.9e-17	44.1
WP_072534798.1\|793772_793988_+	hypothetical protein	NA	NA	NA	NA
WP_072534797.1\|794001_794808_+	ORF6N domain-containing protein	Q9T1J2	Lactobacillus_phage	6.0e-46	58.5
WP_072534796.1\|794819_795029_+	hypothetical protein	NA	NA	NA	NA
WP_015380501.1\|795144_795471_-	hypothetical protein	E9LUT2	Lactobacillus_phage	2.7e-53	98.1
WP_027821292.1\|795528_795789_+	hypothetical protein	NA	NA	NA	NA
WP_063722546.1\|795931_796186_+	hypothetical protein	NA	NA	NA	NA
WP_003641371.1\|796188_796389_+	hypothetical protein	E9LUT7	Lactobacillus_phage	1.0e-26	89.4
WP_162920430.1\|796672_796843_+	hypothetical protein	NA	NA	NA	NA
WP_033098960.1\|796842_797100_+	hypothetical protein	NA	NA	NA	NA
WP_085764068.1\|797202_797931_+	replisome organizer	E9LUM6	Lactobacillus_phage	8.1e-42	41.6
WP_072534795.1\|797930_798716_+	ATP-binding protein	E9LUN6	Lactobacillus_phage	4.1e-132	91.2
WP_079111808.1\|798851_799154_+	hypothetical protein	E9LUN7	Lactobacillus_phage	1.0e-46	93.0
WP_108725408.1\|799156_799468_+	hypothetical protein	A0A2P0ZLB4	Lactobacillus_phage	4.6e-47	89.3
WP_108725409.1\|799578_800184_+	hypothetical protein	E9LUN9	Lactobacillus_phage	2.0e-115	98.5
WP_159082125.1\|800248_800422_+	hypothetical protein	NA	NA	NA	NA
WP_108725410.1\|800493_800931_+	hypothetical protein	A0A1S5RCV6	Lactobacillus_phage	1.8e-12	35.9
WP_172598415.1\|800927_801212_+	hypothetical protein	A0A291I9N7	Lactobacillus_phage	2.8e-22	64.9
WP_079111805.1\|801646_802072_+	transcriptional regulator	E9LUP5	Lactobacillus_phage	7.2e-67	87.2
WP_063485444.1\|803123_804047_+	hypothetical protein	NA	NA	NA	NA
WP_063485443.1\|804129_804309_+	hypothetical protein	E9LUP6	Lactobacillus_phage	3.6e-12	66.1
WP_172598422.1\|804319_804790_+	HNH endonuclease	E9LUP7	Lactobacillus_phage	2.2e-80	91.7
WP_063487070.1\|805009_805471_+\|terminase	phage terminase small subunit P27 family	A0A286QRF4	Streptococcus_phage	3.2e-44	57.5
WP_063487149.1\|805457_807365_+\|terminase	terminase large subunit	E9LUP9	Lactobacillus_phage	2.6e-180	49.8
WP_063487071.1\|807354_807549_+	DUF1056 family protein	E9LUQ0	Lactobacillus_phage	3.8e-23	89.1
WP_063487072.1\|807551_808748_+\|portal	phage portal protein	E9LUQ1	Lactobacillus_phage	2.2e-206	90.2
WP_063487073.1\|808725_809484_+\|protease	Clp protease ClpP	E9LUQ2	Lactobacillus_phage	5.5e-126	94.0
WP_063485680.1\|809483_810716_+\|capsid	phage major capsid protein	E9LUQ3	Lactobacillus_phage	1.9e-200	88.0
WP_108725411.1\|810788_811127_+\|head,tail	phage gp6-like head-tail connector protein	E9LUQ4	Lactobacillus_phage	4.9e-50	90.2
WP_108725412.1\|811110_811473_+\|head	phage head closure protein	E9LUQ5	Lactobacillus_phage	1.3e-64	97.5
WP_108725413.1\|811462_811903_+\|tail	phage tail protein	E9LUQ6	Lactobacillus_phage	5.0e-79	99.3
WP_063487076.1\|811899_812283_+	DUF806 family protein	E9LUQ7	Lactobacillus_phage	7.2e-66	98.4
WP_016058333.1\|812283_812922_+\|tail	phage tail protein	E9LUQ8	Lactobacillus_phage	8.8e-117	100.0
WP_016058334.1\|813123_813507_+	hypothetical protein	E9LUQ9	Lactobacillus_phage	3.9e-64	100.0
WP_016058335.1\|813503_813695_+	hypothetical protein	E9LUR0	Lactobacillus_phage	1.5e-27	100.0
WP_108725414.1\|813707_818930_+\|tail	phage tail protein	E9LUR1	Lactobacillus_phage	0.0e+00	78.2
WP_108725415.1\|819002_820775_+\|tail	phage tail family protein	E9LUR2	Lactobacillus_phage	0.0e+00	97.8
WP_085776083.1\|820838_823208_+\|tail	phage tail protein	E9LUR3	Lactobacillus_phage	0.0e+00	95.7
WP_108725416.1\|823224_825990_+\|tail	phage tail protein	A0A2P0ZL34	Lactobacillus_phage	1.2e-194	50.2
WP_016058340.1\|825982_826237_+	hypothetical protein	E9LUR5	Lactobacillus_phage	1.4e-30	100.0
WP_016058341.1\|826240_826402_+	hypothetical protein	E9LUR6	Lactobacillus_phage	1.2e-19	100.0
WP_108725417.1\|827163_828336_+	LysM peptidoglycan-binding domain-containing protein	E9LUR8	Lactobacillus_phage	3.9e-211	98.2
WP_003644510.1\|828335_828599_+	hemolysin XhlA family protein	E9LUR9	Lactobacillus_phage	2.0e-38	100.0
WP_016058344.1\|828611_829142_+	hypothetical protein	E9LUS0	Lactobacillus_phage	2.9e-41	100.0
WP_044430952.1\|830379_831591_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
WP_003561746.1\|833163_834339_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_044430948.1\|835189_835981_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.0e-31	37.3
WP_085776080.1\|835961_837146_+	LCP family protein	NA	NA	NA	NA
WP_044430944.1\|837297_837870_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003644504.1\|838621_839563_-	glycosyltransferase family 2 protein	V9QJB1	Oenococcus_phage	2.4e-78	49.0
WP_003644503.1\|840007_840400_-	hypothetical protein	NA	NA	NA	NA
WP_003640750.1\|840563_840956_+	hypothetical protein	NA	NA	NA	NA
WP_003640749.1\|840991_842161_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_003644502.1\|842210_842840_-	hypothetical protein	NA	NA	NA	NA
WP_157262971.1\|843213_843306_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_003640747.1\|843394_844027_-	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	2.3e-16	56.2
WP_003644501.1\|844178_844418_+	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003640745.1\|844515_844752_+	YneF family protein	NA	NA	NA	NA
WP_003645630.1\|844808_845444_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_003644499.1\|845555_846314_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_003640742.1\|846297_846603_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_003640741.1\|846687_847686_+	D-2-hydroxyacid dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	2.3e-47	34.9
WP_003640740.1\|847974_848697_-	HAD family hydrolase	NA	NA	NA	NA
WP_003640739.1\|848921_849725_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_003644498.1\|849827_850706_+	elongation factor Ts	NA	NA	NA	NA
849927:849944	attR	NA	NA	NA	NA
WP_003640737.1\|850906_851629_+	UMP kinase	NA	NA	NA	NA
WP_003640736.1\|851630_852194_+	ribosome recycling factor	NA	NA	NA	NA
WP_003640735.1\|852313_853093_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.1e-23	43.1
WP_003640734.1\|853108_853894_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_003640733.1\|853931_855209_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_003640732.1\|855248_856958_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_003640729.1\|857451_861765_+	DNA polymerase III subunit alpha	A0A1X9SH08	Bradyrhizobium_phage	1.0e-14	34.0
WP_003640728.1\|862060_862537_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_108725418.1\|862557_863775_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_003640726.1\|863819_864119_+	YlxR family protein	NA	NA	NA	NA
WP_013355610.1\|864108_864414_+	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA
WP_108725419.1\|864428_867005_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.6e-20	23.3
WP_003640723.1\|867027_867381_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_061871736.1\|868029_869484_+	MFS transporter	NA	NA	NA	NA
WP_013355607.1\|869476_870646_+	chorismate synthase	NA	NA	NA	NA
WP_108725420.1\|870654_871182_+	amino acid biosynthesis protein	NA	NA	NA	NA
WP_044430868.1\|871195_872494_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_085776076.1\|872496_873594_+	prephenate dehydrogenase	NA	NA	NA	NA
WP_003640717.1\|873596_874118_+	shikimate kinase	NA	NA	NA	NA
WP_072533795.1\|874602_875526_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA

DBSCAN-SWA_4

1362655 : 1372545

Lactobacillus_phage(87.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085775979.1\|1362655_1363096_+	nucleoside 2-deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	8.8e-76	97.9
WP_085775978.1\|1363166_1363727_-	hypothetical protein	A0A2P0ZL75	Lactobacillus_phage	5.9e-101	99.5
WP_061876166.1\|1363814_1366253_-	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	0.0e+00	99.6
WP_003643097.1\|1366255_1366870_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	6.3e-112	100.0
WP_027822909.1\|1367212_1368160_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	1.0e-177	99.7
WP_033608586.1\|1368345_1369317_+	peptidase S41	A0A2P0ZL68	Lactobacillus_phage	5.9e-181	98.5
WP_085775977.1\|1369407_1370637_-	hypothetical protein	A0A2P0ZL72	Lactobacillus_phage	1.3e-214	97.2
WP_085775976.1\|1370853_1372545_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	3.6e-93	41.5

DBSCAN-SWA_5

2194520 : 2277789

Klosneuvirus(20.0%)

tRNA,transposase,protease,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003643823.1\|2194520_2196572_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	2.7e-90	35.8
WP_072533021.1\|2196893_2197283_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_069710498.1\|2197879_2198722_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_003646490.1\|2198721_2199426_-	NAD-dependent protein deacylase	NA	NA	NA	NA
WP_072533019.1\|2199447_2200407_-	IpaB/EvcA family protein	NA	NA	NA	NA
WP_003642009.1\|2200399_2201674_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_003642008.1\|2201719_2202637_-	Ppx/GppA family phosphatase	NA	NA	NA	NA
WP_003643820.1\|2202806_2203601_-	hypothetical protein	NA	NA	NA	NA
WP_003642006.1\|2203605_2204739_-	hypothetical protein	NA	NA	NA	NA
WP_108725541.1\|2205193_2206207_-\|tRNA	tRNA-dihydrouridine synthase family protein	NA	NA	NA	NA
WP_003642004.1\|2206319_2207066_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003642003.1\|2207215_2208112_-	ROK family protein	NA	NA	NA	NA
WP_003642002.1\|2208232_2209669_-	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	9.7e-31	25.5
WP_003643816.1\|2209686_2211042_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_053566443.1\|2211264_2211687_-	DUF3284 domain-containing protein	NA	NA	NA	NA
WP_003641999.1\|2211676_2211865_-	hypothetical protein	NA	NA	NA	NA
WP_003641998.1\|2211871_2213233_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003641997.1\|2213305_2214016_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003643815.1\|2214423_2215440_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_072533014.1\|2215879_2216656_-	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_108725542.1\|2216913_2219223_+	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_027821496.1\|2219317_2219521_-	hypothetical protein	NA	NA	NA	NA
WP_027821497.1\|2219658_2220345_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_053339247.1\|2220438_2221119_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_027821499.1\|2221205_2221874_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_062688861.1\|2222720_2224097_-	HlyD family secretion protein	NA	NA	NA	NA
WP_085775816.1\|2224112_2226263_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	5.2e-44	27.7
WP_003641985.1\|2226529_2226700_+\|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnE	NA	NA	NA	NA
WP_003643811.1\|2226724_2226883_+\|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnF	NA	NA	NA	NA
WP_015825123.1\|2226981_2227755_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_108725543.1\|2228060_2228804_-	response regulator transcription factor	NA	NA	NA	NA
WP_003561746.1\|2229640_2230816_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_108725544.1\|2231047_2231197_-	plantaricin A precursor peptide, induction factor	NA	NA	NA	NA
WP_108725545.1\|2231328_2232075_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_107148174.1\|2232105_2233305_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003641975.1\|2233422_2233590_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_063487606.1\|2233717_2233918_-	hypothetical protein	NA	NA	NA	NA
WP_108725546.1\|2235109_2235778_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_157113081.1\|2236371_2236545_-	hypothetical protein	NA	NA	NA	NA
WP_072533003.1\|2236734_2236935_-	hypothetical protein	NA	NA	NA	NA
WP_072533002.1\|2237275_2238460_-	cation:proton antiporter	NA	NA	NA	NA
WP_108725547.1\|2238504_2239881_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_003641966.1\|2240406_2241222_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003643797.1\|2241381_2242254_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003643796.1\|2242324_2243116_+	HAD family hydrolase	NA	NA	NA	NA
WP_003641963.1\|2243119_2244274_+	MFS transporter	NA	NA	NA	NA
WP_003643794.1\|2244277_2244895_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_056988788.1\|2245336_2246197_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_003643792.1\|2246899_2247319_-	hypothetical protein	NA	NA	NA	NA
WP_003646456.1\|2247893_2248139_-	hypothetical protein	NA	NA	NA	NA
WP_085775814.1\|2248530_2248794_-	hypothetical protein	NA	NA	NA	NA
WP_085775813.1\|2248837_2249755_-	hypothetical protein	NA	NA	NA	NA
WP_108725669.1\|2249878_2249995_-	hypothetical protein	NA	NA	NA	NA
WP_003646448.1\|2250375_2250609_-	hypothetical protein	NA	NA	NA	NA
WP_108725548.1\|2250614_2252435_-	hypothetical protein	NA	NA	NA	NA
WP_108725549.1\|2252436_2256132_-	MucBP domain-containing protein	NA	NA	NA	NA
WP_108725550.1\|2256718_2257441_-	aquaporin family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	7.1e-30	31.5
WP_003643774.1\|2257455_2259285_-	type 1 glycerol-3-phosphate oxidase	NA	NA	NA	NA
WP_085775810.1\|2259299_2260817_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_024971425.1\|2261282_2262614_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_015825109.1\|2262691_2263663_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.7
WP_085775809.1\|2263663_2265190_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_027822144.1\|2265427_2265874_+	ribonuclease H	NA	NA	NA	NA
WP_085775808.1\|2268366_2269266_-	oxidoreductase	NA	NA	NA	NA
WP_108725551.1\|2269402_2270323_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA
WP_085775807.1\|2270488_2271061_-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_003641935.1\|2271164_2271620_-	hypothetical protein	NA	NA	NA	NA
WP_003646440.1\|2271638_2272109_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_013355174.1\|2272218_2273415_+	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003641932.1\|2273445_2273955_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_013355173.1\|2274067_2274436_-	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_003641930.1\|2274700_2276206_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_072532993.1\|2276363_2277032_-	ribose 5-phosphate isomerase A	NA	NA	NA	NA
WP_003643762.1\|2277225_2277789_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021086

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection