CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP026496	Klebsiella pneumoniae strain 616 plasmid pKp616_1, complete sequence	0 crisprs	NA	1
NZ_CP026495	Klebsiella pneumoniae strain 616 chromosome, complete genome	1 crisprs	csa3,cas3,DEDDh,DinG,RT,WYL	4
NZ_CP026497	Klebsiella pneumoniae strain 616 plasmid pKp616_2, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP026495_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP026495_1

4363653-4363747

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP026495_1

>merge|NZ_CP026495|1|4363653-4363747|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP026495|1|1|4363653-4363747|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP026495.1\|WP_002888345.1\|4362199_4363564_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP026495.1\|WP_002888329.1\|4369708_4370995_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP026495.1\|WP_032434232.1\|4355282_4357640_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP026495.1\|WP_004182906.1\|4365503_4366202_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP026495.1\|WP_023325085.1\|4357827_4360734_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP026495.1\|WP_004145972.1\|4349868_4350714_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP026495.1\|WP_004177430.1\|4371000_4371990_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP026495.1\|WP_032434230.1\|4351051_4352761_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP026495.1\|WP_002888320.1\|4374295_4374775_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP026495.1\|WP_004192048.1\|4363888_4365514_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP026495.1\|WP_002888332.1\|4366234_4367062_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP026495.1\|WP_004147026.1\|4367305_4369654_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP026495.1\|WP_002888347.1\|4361480_4362020_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP026495.1\|WP_002888353.1\|4354411_4355107_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP026495.1\|WP_002888348.1\|4360746_4361406_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP026495.1\|WP_002888323.1\|4372810_4373188_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP026495.1\|WP_002888324.1\|4371986_4372808_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP026495.1\|WP_002888373.1\|4348972_4349740_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP026495.1\|WP_004177424.1\|4352771_4354274_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP026495.1\|WP_002888321.1\|4373192_4374041_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208

Protein	Function_ID	Function_description	E-value
NZ_CP026495.1\|WP_002888345.1\|4362199_4363564_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP026495.1\|WP_002888329.1\|4369708_4370995_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP026495.1\|WP_032434232.1\|4355282_4357640_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP026495.1\|WP_004182906.1\|4365503_4366202_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	1.65624e-65
NZ_CP026495.1\|WP_023325085.1\|4357827_4360734_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP026495.1\|WP_004145972.1\|4349868_4350714_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP026495.1\|WP_004177430.1\|4371000_4371990_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP026495.1\|WP_032434230.1\|4351051_4352761_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP026495.1\|WP_002888320.1\|4374295_4374775_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP026495.1\|WP_004192048.1\|4363888_4365514_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	7.63459e-173
NZ_CP026495.1\|WP_002888332.1\|4366234_4367062_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP026495.1\|WP_004147026.1\|4367305_4369654_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP026495.1\|WP_002888347.1\|4361480_4362020_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP026495.1\|WP_002888353.1\|4354411_4355107_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP026495.1\|WP_002888348.1\|4360746_4361406_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP026495.1\|WP_002888323.1\|4372810_4373188_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP026495.1\|WP_002888324.1\|4371986_4372808_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP026495.1\|WP_002888373.1\|4348972_4349740_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP026495.1\|WP_004177424.1\|4352771_4354274_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP026495.1\|WP_002888321.1\|4373192_4374041_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0

>NZ_CP026495.1|WP_002888345.1|4362199_4363564_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP026495.1|WP_002888347.1|4361480_4362020_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP026495.1|WP_002888348.1|4360746_4361406_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP026495.1|WP_023325085.1|4357827_4360734_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP026495.1|WP_032434232.1|4355282_4357640_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIERRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQEFSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP026495.1|WP_002888353.1|4354411_4355107_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP026495.1|WP_004177424.1|4352771_4354274_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP026495.1|WP_032434230.1|4351051_4352761_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAHAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_CP026495.1|WP_004145972.1|4349868_4350714_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP026495.1|WP_002888373.1|4348972_4349740_-|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>NZ_CP026495.1|WP_004192048.1|4363888_4365514_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEVHDAS
>NZ_CP026495.1|WP_004182906.1|4365503_4366202_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSGREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP026495.1|WP_002888332.1|4366234_4367062_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP026495.1|WP_004147026.1|4367305_4369654_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP026495.1|WP_002888329.1|4369708_4370995_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP026495.1|WP_004177430.1|4371000_4371990_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVALNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP026495.1|WP_002888324.1|4371986_4372808_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP026495.1|WP_002888323.1|4372810_4373188_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP026495.1|WP_002888321.1|4373192_4374041_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP026495.1|WP_002888320.1|4374295_4374775_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1436097 : 1533593

Escherichia_phage(21.28%)

head,holin,integrase,protease,tail,terminase,tRNA,capsid,plate,portal

attL 1471306:1471330|attR 1510839:1510863

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025368032.1\|1436097_1437447_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_025368033.1\|1437443_1438133_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_032434868.1\|1438132_1439809_+	OmpA family protein	NA	NA	NA	NA
WP_025368035.1\|1439811_1440303_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_107318634.1\|1440533_1440698_+	hypothetical protein	NA	NA	NA	NA
WP_032434870.1\|1440723_1443081_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_071994657.1\|1443090_1443633_+	DUF3828 domain-containing protein	NA	NA	NA	NA
WP_032425140.1\|1443706_1444177_+	DUF3828 domain-containing protein	NA	NA	NA	NA
WP_077254137.1\|1444519_1446922_+	glycoside hydrolase family 104 protein	NA	NA	NA	NA
WP_032434872.1\|1446918_1447362_+	hypothetical protein	NA	NA	NA	NA
WP_071886200.1\|1447522_1447903_+	DUF4087 domain-containing protein	NA	NA	NA	NA
WP_123618670.1\|1448374_1448803_+	hypothetical protein	NA	NA	NA	NA
WP_025368039.1\|1449019_1449319_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_032435675.1\|1449381_1449645_+	PAAR domain-containing protein	R9U4D0	Rhizobium_phage	1.2e-06	50.0
WP_032425487.1\|1449647_1450856_+	membrane protein	NA	NA	NA	NA
WP_032434874.1\|1450848_1454220_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_153582916.1\|1454222_1454372_+	hypothetical protein	NA	NA	NA	NA
WP_032434876.1\|1454712_1456320_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_025368043.1\|1456353_1458123_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_032425136.1\|1458086_1459169_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_032425135.1\|1459204_1459729_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_077254124.1\|1459733_1462055_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.7e-14	29.0
WP_050484908.1\|1462051_1462555_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.5e-18	40.0
WP_023317120.1\|1462548_1462893_+	hypothetical protein	NA	NA	NA	NA
WP_086472102.1\|1462925_1463663_+	hypothetical protein	NA	NA	NA	NA
WP_049107563.1\|1463905_1464388_+	hypothetical protein	NA	NA	NA	NA
WP_032434878.1\|1466271_1467156_+	glycine zipper family protein	NA	NA	NA	NA
WP_050598595.1\|1467145_1467703_+	hypothetical protein	NA	NA	NA	NA
WP_071838925.1\|1468210_1468609_+	hypothetical protein	NA	NA	NA	NA
WP_123618669.1\|1469397_1469847_+	hypothetical protein	NA	NA	NA	NA
WP_050598596.1\|1469843_1470377_+	hypothetical protein	NA	NA	NA	NA
1471306:1471330	attL	NA	NA	NA	NA
WP_032434882.1\|1471524_1472694_+\|integrase	site-specific integrase	A0A2R2Z2Y0	Escherichia_phage	1.9e-202	86.1
WP_123618668.1\|1472798_1473641_+	hypothetical protein	NA	NA	NA	NA
WP_077254126.1\|1473742_1473943_-	hypothetical protein	G3CFG7	Escherichia_phage	1.8e-12	60.0
WP_004864289.1\|1474750_1475266_-	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	2.9e-70	76.4
WP_021314787.1\|1475641_1476718_-	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	2.8e-147	74.4
WP_032434886.1\|1476845_1477631_-	hypothetical protein	A4JX52	Burkholderia_virus	2.9e-61	50.6
WP_024623196.1\|1477630_1477930_-	hypothetical protein	K7PJS4	Enterobacterial_phage	1.1e-13	48.6
WP_000690183.1\|1478558_1479254_-	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	2.7e-87	71.3
WP_001191665.1\|1479351_1479594_+	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.3e-25	80.3
WP_004213338.1\|1479628_1480090_+	hypothetical protein	K7PJS5	Enterobacterial_phage	1.7e-69	88.2
WP_001208720.1\|1480327_1480507_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	4.6e-15	73.1
WP_017880208.1\|1480496_1481450_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	6.1e-90	69.0
WP_032434888.1\|1481446_1482256_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	2.9e-109	68.9
WP_000779146.1\|1482265_1482643_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.3e-48	73.6
WP_032434890.1\|1482655_1483636_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	7.6e-136	67.5
WP_004899672.1\|1483649_1484228_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	7.6e-51	57.2
WP_032412064.1\|1484447_1484873_+	tellurite resistance TerB family protein	Q71TK7	Escherichia_phage	1.9e-59	83.7
WP_032434891.1\|1484869_1485025_+	DUF3927 family protein	A0A0A0YRI9	Escherichia_phage	2.5e-09	68.8
WP_017145563.1\|1485523_1485919_+	membrane protein	K7PHB9	Enterobacterial_phage	2.6e-63	98.5
WP_019705280.1\|1485905_1486187_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.9e-37	80.6
WP_032434894.1\|1486186_1486816_+	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	1.2e-105	90.9
WP_032434896.1\|1486823_1487099_+	hypothetical protein	G8C7W1	Escherichia_phage	1.9e-23	66.3
WP_032434899.1\|1487300_1487960_-	hypothetical protein	NA	NA	NA	NA
WP_032434901.1\|1488159_1488510_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	3.4e-46	73.7
WP_032434902.1\|1488668_1489166_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	2.5e-63	72.0
WP_000246643.1\|1489169_1490921_+\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	6.7e-252	72.2
WP_032434905.1\|1491068_1492295_+\|portal	phage portal protein	Q8SBI0	Shigella_phage	3.2e-208	85.3
WP_032434907.1\|1492287_1492887_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.0e-90	83.0
WP_004104235.1\|1492896_1494135_+\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	6.8e-158	69.2
WP_023316722.1\|1494212_1494530_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	4.8e-23	52.0
WP_031592512.1\|1494538_1494877_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.3e-38	67.9
WP_019705270.1\|1494873_1495323_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	6.7e-63	82.6
WP_023302599.1\|1495319_1495667_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.8e-32	63.7
WP_032412035.1\|1495723_1496428_+	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	9.5e-80	66.5
WP_032434909.1\|1496458_1496863_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	1.9e-32	56.2
WP_016530183.1\|1496865_1497171_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	4.7e-28	64.6
WP_016530182.1\|1497244_1497478_+	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
WP_032434911.1\|1497539_1500926_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	4.0e-301	57.5
WP_004884312.1\|1500947_1501421_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.1e-55	62.7
WP_023302606.1\|1501407_1501884_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	5.3e-50	64.6
WP_032434913.1\|1501896_1502277_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	2.0e-60	83.3
WP_032434915.1\|1502273_1505351_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	62.2
WP_032434917.1\|1508035_1509130_+	hypothetical protein	A0A248XD67	Klebsiella_phage	1.4e-178	86.5
WP_159080870.1\|1509164_1510253_-	acyltransferase family protein	NA	NA	NA	NA
WP_004149224.1\|1510951_1511881_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	6.7e-134	81.4
1510839:1510863	attR	NA	NA	NA	NA
WP_002913362.1\|1512170_1512932_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_004149222.1\|1512993_1514322_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_002913359.1\|1514689_1514974_+	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_032434923.1\|1515133_1516444_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_032434925.1\|1516443_1518588_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_002913355.1\|1518797_1519283_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_002913348.1\|1519303_1519855_-	endonuclease SmrB	NA	NA	NA	NA
WP_002913346.1\|1520022_1520955_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_002913342.1\|1520996_1522082_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-89	46.6
WP_004174960.1\|1522084_1522909_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_002913340.1\|1522908_1523718_+	TSUP family transporter	NA	NA	NA	NA
WP_002913339.1\|1523717_1524266_+	elongation factor P hydroxylase	NA	NA	NA	NA
WP_002913338.1\|1524297_1524579_+	YfcL family protein	NA	NA	NA	NA
WP_032435686.1\|1524640_1526629_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_002913291.1\|1526787_1528008_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_004149211.1\|1528217_1529393_+	MFS transporter	NA	NA	NA	NA
WP_023282884.1\|1529479_1530457_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_002913228.1\|1530567_1531704_+	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	1.6e-20	27.8
WP_002913227.1\|1531767_1532781_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_015958766.1\|1532780_1533593_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA

DBSCAN-SWA_2

1732515 : 1739420

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180551.1\|1732515_1733379_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_004899467.1\|1733389_1734163_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_002912636.1\|1734403_1735297_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004144192.1\|1735542_1736904_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004175198.1\|1737222_1737945_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_032434977.1\|1737941_1739420_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

2703817 : 2714704

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020805006.1\|2703817_2706925_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
WP_004176258.1\|2706979_2708245_+	MFS transporter	NA	NA	NA	NA
WP_020805010.1\|2708275_2709364_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	1.8e-210	99.7
WP_004176262.1\|2709450_2709711_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_004179754.1\|2710008_2710869_+	class A beta-lactamase SHV-28	A0A077SL40	Escherichia_phage	1.7e-155	99.3
WP_002210513.1\|2710889_2711651_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002903955.1\|2711911_2712814_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_004190239.1\|2712825_2714091_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.9e-233	99.5
WP_002210516.1\|2714083_2714704_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_4

3378686 : 3388160

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004209699.1\|3378686_3380408_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3380452_3381154_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3381507_3381726_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3381856_3384136_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3384166_3384484_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3384809_3385031_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_025368306.1\|3385107_3387048_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	5.0e-38	41.0
WP_002896440.1\|3387044_3388160_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP026496

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 39249

Escherichia_phage(33.33%)

integrase,transposase

attL 27214:27273|attR 33444:34369

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001749982.1\|0_720_+	replication initiation protein	I3WF20	Macacine_betaherpesvirus	8.6e-20	28.9
WP_001749988.1\|2676_3246_-	recombinase family protein	E5FFF9	Burkholderia_phage	5.2e-36	43.2
WP_001067855.1\|3595_4300_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_108742640.1\|4276_4600_+	hypothetical protein	A0A1B0VDR3	Salmonella_phage	2.2e-36	100.0
WP_000239590.1\|4855_5731_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001067855.1\|5978_6683_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000792636.1\|7654_8188_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.8e-21	33.9
WP_000128596.1\|8187_9183_-	Flp pilus assembly complex ATPase component	NA	NA	NA	NA
WP_000101710.1\|9224_10385_-	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_019706045.1\|10384_11206_-	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_000646594.1\|11279_11978_-	type IV secretion system protein	NA	NA	NA	NA
WP_001749958.1\|12196_13237_-	type IV secretion system protein	NA	NA	NA	NA
WP_001749959.1\|13252_13480_-	IncN-type entry exclusion lipoprotein EexN	NA	NA	NA	NA
WP_001749960.1\|13487_14201_-	hypothetical protein	NA	NA	NA	NA
WP_001749961.1\|14218_16819_-	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_000496058.1\|16818_17136_-	hypothetical protein	NA	NA	NA	NA
WP_001749962.1\|17185_17479_-	hypothetical protein	NA	NA	NA	NA
WP_000440698.1\|17488_17770_-	hypothetical protein	NA	NA	NA	NA
WP_001749963.1\|17778_18513_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_024129965.1\|18576_18927_+	H-NS histone family protein	NA	NA	NA	NA
WP_001749964.1\|18942_19287_+	hypothetical protein	NA	NA	NA	NA
WP_001749965.1\|19283_19598_+	KikA protein	NA	NA	NA	NA
WP_001452736.1\|19633_19945_+	hypothetical protein	NA	NA	NA	NA
WP_001749966.1\|20000_20642_+	restriction endonuclease	NA	NA	NA	NA
WP_001749967.1\|20646_20853_+	hypothetical protein	NA	NA	NA	NA
WP_001288432.1\|21234_22668_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_004098817.1\|22701_23916_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001389365.1\|24176_24941_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001144737.1\|25083_25350_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004201280.1\|25570_26044_-	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_000845048.1\|26199_27213_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
27214:27273	attL	NA	NA	NA	NA
WP_001067855.1\|27379_28084_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004098817.1\|28931_30146_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001389365.1\|30406_31171_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001144737.1\|31313_31580_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004201280.1\|31800_32274_-	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_000845048.1\|32429_33443_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001067855.1\|33609_34314_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001120891.1\|34624_35164_+\|transposase	IS91 family transposase	NA	NA	NA	NA
33444:34369	attR	NA	NA	NA	NA
WP_000480968.1\|35135_35972_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|35971_36775_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_001043260.1\|36835_37651_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_000954592.1\|37980_38157_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_001067855.1\|38544_39249_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP026497

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8565 : 18362

Escherichia_phage(37.5%)

transposase,integrase

attL 13182:13195|attR 20161:20174

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015062799.1\|8565_9000_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.9e-30	56.1
WP_072038560.1\|9982_11473_-	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	1.7e-78	98.7
WP_001067855.1\|11552_12257_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_032488413.1\|12338_13199_-	class A extended-spectrum beta-lactamase SHV-2a	A0A077SL40	Escherichia_phage	7.6e-156	99.7
13182:13195	attL	NA	NA	NA	NA
WP_001067855.1\|13335_14040_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_108742642.1\|13985_14234_-	hypothetical protein	NA	NA	NA	NA
WP_031942500.1\|14374_14836_+	hypothetical protein	NA	NA	NA	NA
WP_004187394.1\|14832_15081_+	helix-turn-helix transcriptional regulator	A0A248SLB9	Klebsiella_phage	1.6e-10	53.0
WP_011154450.1\|15073_15661_+	restriction endonuclease	NA	NA	NA	NA
WP_004187390.1\|15657_16143_+	hypothetical protein	NA	NA	NA	NA
WP_077266250.1\|16184_16388_+	hypothetical protein	NA	NA	NA	NA
WP_004187383.1\|16406_17147_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	9.5e-22	51.6
WP_011091047.1\|17387_18362_+	hypothetical protein	A0A0A7NPX4	Enterobacteria_phage	6.1e-85	52.0
20161:20174	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP026495

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP026496

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP026497

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection