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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP029656 Staphylococcus aureus strain AR_0468 plasmid unnamed1, complete sequence 0 crisprs csa3 0 0 0 0
NZ_CP029657 Staphylococcus aureus strain AR_0468 chromosome, complete genome 12 crisprs cas3,DEDDh,DinG,csa3,RT,WYL 10 3 9 2

Results visualization

1. NZ_CP029657
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_1 425149-425250 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_2 778649-778731 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_3 819596-819674 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_4 825051-825320 Unclear NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_5 832365-832444 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_6 868278-868359 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_7 1702915-1702999 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_8 1737390-1737470 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_9 2137141-2137222 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_10 2266397-2266477 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_11 2278720-2278805 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029657_12 2431248-2431328 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 187037-187058 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 310113-310134 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 653182-653203 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 777690-777711 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 868351-868372 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 1387219-1387240 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 1475772-1475793 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 1702991-1703012 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 1717525-1717546 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 2036258-2036279 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 187037-187058 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 310113-310134 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 653182-653203 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 777690-777711 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 868351-868372 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 1387219-1387240 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 1475772-1475793 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 1702991-1703012 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 1717525-1717546 0 1.0
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 2036258-2036279 0 1.0
NZ_CP029657_5 5.1|832389|32|NZ_CP029657|CRISPRCasFinder 832389-832420 32 NZ_CP029657.1 88402-88433 0 1.0
NZ_CP029657_5 5.1|832389|32|NZ_CP029657|CRISPRCasFinder 832389-832420 32 NZ_CP029657.1 868608-868639 0 1.0
NZ_CP029657_5 5.1|832389|32|NZ_CP029657|CRISPRCasFinder 832389-832420 32 NZ_CP029657.1 1717584-1717615 0 1.0
NZ_CP029657_5 5.1|832389|32|NZ_CP029657|CRISPRCasFinder 832389-832420 32 NZ_CP029657.1 2161217-2161248 0 1.0
NZ_CP029657_5 5.1|832389|32|NZ_CP029657|CRISPRCasFinder 832389-832420 32 NZ_CP029657.1 2596095-2596126 0 1.0
NZ_CP029657_9 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder 2137165-2137198 34 NZ_CP029657.1 819595-819628 0 1.0
NZ_CP029657_9 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder 2137165-2137198 34 NZ_CP029657.1 1175596-1175629 0 1.0
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 982671-982692 1 0.955
NZ_CP029657_4 4.1|825087|22|NZ_CP029657|CRT 825087-825108 22 NZ_CP029657.1 1737252-1737273 1 0.955
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 NZ_CP029657.1 778640-778662 1 0.957
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 NZ_CP029657.1 778918-778940 1 0.957
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 NZ_CP029657.1 1387335-1387357 1 0.957
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 NZ_CP029657.1 2036316-2036338 1 0.957
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 NZ_CP029657.1 2420477-2420499 1 0.957
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 982671-982692 1 0.955
NZ_CP029657_4 4.3|825204|22|NZ_CP029657|CRT 825204-825225 22 NZ_CP029657.1 1737252-1737273 1 0.955
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 NZ_CP029657.1 778640-778662 1 0.957
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 NZ_CP029657.1 778918-778940 1 0.957
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 NZ_CP029657.1 1387335-1387357 1 0.957
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 NZ_CP029657.1 2036316-2036338 1 0.957
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 NZ_CP029657.1 2420477-2420499 1 0.957
NZ_CP029657_5 5.1|832389|32|NZ_CP029657|CRISPRCasFinder 832389-832420 32 NZ_CP029657.1 1387393-1387424 1 0.969
NZ_CP029657_6 6.1|868302|34|NZ_CP029657|CRISPRCasFinder 868302-868335 34 NZ_CP029657.1 1387315-1387348 1 0.971
NZ_CP029657_7 7.1|1702941|33|NZ_CP029657|CRISPRCasFinder 1702941-1702973 33 NZ_CP029657.1 1387316-1387348 1 0.97
NZ_CP029657_9 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder 2137165-2137198 34 NZ_CP029657.1 1829569-1829602 1 0.971
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 832339-832369 1 0.968
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 NZ_CP029657.1 1475655-1475677 2 0.913
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 NZ_CP029657.1 2137222-2137244 2 0.913
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 NZ_CP029657.1 1475655-1475677 2 0.913
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 NZ_CP029657.1 2137222-2137244 2 0.913
NZ_CP029657_8 8.1|1737413|35|NZ_CP029657|CRISPRCasFinder 1737413-1737447 35 NZ_CP029657.1 868335-868369 2 0.943
NZ_CP029657_8 8.1|1737413|35|NZ_CP029657|CRISPRCasFinder 1737413-1737447 35 NZ_CP029657.1 1737236-1737270 2 0.943
NZ_CP029657_9 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder 2137165-2137198 34 NZ_CP029657.1 1391689-1391722 2 0.941
NZ_CP029657_9 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder 2137165-2137198 34 NZ_CP029657.1 2870063-2870096 2 0.941
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 88408-88438 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 386411-386441 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 653237-653267 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 868614-868644 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 1078669-1078699 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 1181197-1181227 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 1387274-1387304 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 1475708-1475738 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 1475824-1475854 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 1717579-1717609 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 2034910-2034940 2 0.935
NZ_CP029657_12 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder 2431273-2431303 31 NZ_CP029657.1 2596101-2596131 2 0.935

1. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 187037-187058, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

2. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 310113-310134, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

3. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 653182-653203, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

4. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 777690-777711, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

5. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 868351-868372, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

6. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 1387219-1387240, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

7. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 1475772-1475793, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

8. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 1702991-1703012, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

9. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 1717525-1717546, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

10. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 2036258-2036279, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

11. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 187037-187058, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

12. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 310113-310134, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

13. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 653182-653203, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

14. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 777690-777711, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

15. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 868351-868372, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

16. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 1387219-1387240, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

17. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 1475772-1475793, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

18. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 1702991-1703012, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

19. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 1717525-1717546, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

20. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 2036258-2036279, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

21. spacer 5.1|832389|32|NZ_CP029657|CRISPRCasFinder matches to position: 88402-88433, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgactttccgc	CRISPR spacer
aacttgcacattattgtaagctgactttccgc	Protospacer
********************************

22. spacer 5.1|832389|32|NZ_CP029657|CRISPRCasFinder matches to position: 868608-868639, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgactttccgc	CRISPR spacer
aacttgcacattattgtaagctgactttccgc	Protospacer
********************************

23. spacer 5.1|832389|32|NZ_CP029657|CRISPRCasFinder matches to position: 1717584-1717615, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgactttccgc	CRISPR spacer
aacttgcacattattgtaagctgactttccgc	Protospacer
********************************

24. spacer 5.1|832389|32|NZ_CP029657|CRISPRCasFinder matches to position: 2161217-2161248, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgactttccgc	CRISPR spacer
aacttgcacattattgtaagctgactttccgc	Protospacer
********************************

25. spacer 5.1|832389|32|NZ_CP029657|CRISPRCasFinder matches to position: 2596095-2596126, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgactttccgc	CRISPR spacer
aacttgcacattattgtaagctgactttccgc	Protospacer
********************************

26. spacer 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder matches to position: 819595-819628, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

27. spacer 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder matches to position: 1175596-1175629, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

28. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 982671-982692, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

29. spacer 4.1|825087|22|NZ_CP029657|CRT matches to position: 1737252-1737273, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

30. spacer 4.2|825145|23|NZ_CP029657|CRT matches to position: 778640-778662, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

31. spacer 4.2|825145|23|NZ_CP029657|CRT matches to position: 778918-778940, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

32. spacer 4.2|825145|23|NZ_CP029657|CRT matches to position: 1387335-1387357, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

33. spacer 4.2|825145|23|NZ_CP029657|CRT matches to position: 2036316-2036338, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

34. spacer 4.2|825145|23|NZ_CP029657|CRT matches to position: 2420477-2420499, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

35. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 982671-982692, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

36. spacer 4.3|825204|22|NZ_CP029657|CRT matches to position: 1737252-1737273, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

37. spacer 4.4|825262|23|NZ_CP029657|CRT matches to position: 778640-778662, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

38. spacer 4.4|825262|23|NZ_CP029657|CRT matches to position: 778918-778940, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

39. spacer 4.4|825262|23|NZ_CP029657|CRT matches to position: 1387335-1387357, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

40. spacer 4.4|825262|23|NZ_CP029657|CRT matches to position: 2036316-2036338, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

41. spacer 4.4|825262|23|NZ_CP029657|CRT matches to position: 2420477-2420499, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

42. spacer 5.1|832389|32|NZ_CP029657|CRISPRCasFinder matches to position: 1387393-1387424, mismatch: 1, identity: 0.969

aacttgcacattattgtaagctgactttccgc	CRISPR spacer
aacttgcacattattgtaaactgactttccgc	Protospacer
*******************.************

43. spacer 6.1|868302|34|NZ_CP029657|CRISPRCasFinder matches to position: 1387315-1387348, mismatch: 1, identity: 0.971

attgagaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
****.*****************************

44. spacer 7.1|1702941|33|NZ_CP029657|CRISPRCasFinder matches to position: 1387316-1387348, mismatch: 1, identity: 0.97

attgggaatccaatttctctgtgttggggccca	CRISPR spacer
attgggaatccaatttctctttgttggggccca	Protospacer
******************** ************

45. spacer 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder matches to position: 1829569-1829602, mismatch: 1, identity: 0.971

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctttgtgttgg	Protospacer
*************************.********

46. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 832339-832369, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

47. spacer 4.2|825145|23|NZ_CP029657|CRT matches to position: 1475655-1475677, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

48. spacer 4.2|825145|23|NZ_CP029657|CRT matches to position: 2137222-2137244, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

49. spacer 4.4|825262|23|NZ_CP029657|CRT matches to position: 1475655-1475677, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

50. spacer 4.4|825262|23|NZ_CP029657|CRT matches to position: 2137222-2137244, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

51. spacer 8.1|1737413|35|NZ_CP029657|CRISPRCasFinder matches to position: 868335-868369, mismatch: 2, identity: 0.943

tccccaacttccattgcctgtagaatttctttacg	CRISPR spacer
tccccaacttgcattgcctgtagaatttcttttcg	Protospacer
********** ********************* **

52. spacer 8.1|1737413|35|NZ_CP029657|CRISPRCasFinder matches to position: 1737236-1737270, mismatch: 2, identity: 0.943

tccccaacttccattgcctgtagaatttctttacg	CRISPR spacer
tccccaactggcattgcctgtagaatttctttacg	Protospacer
*********  ************************

53. spacer 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder matches to position: 1391689-1391722, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtggaatttcttatcgaaattctctgtgttgg	Protospacer
****.********* *******************

54. spacer 9.1|2137165|34|NZ_CP029657|CRISPRCasFinder matches to position: 2870063-2870096, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctttttgttgg	Protospacer
*************************.* ******

55. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 88408-88438, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

56. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 386411-386441, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

57. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 653237-653267, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

58. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 868614-868644, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

59. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 1078669-1078699, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

60. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 1181197-1181227, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

61. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 1387274-1387304, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

62. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 1475708-1475738, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

63. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 1475824-1475854, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

64. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 1717579-1717609, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

65. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 2034910-2034940, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

66. spacer 12.1|2431273|31|NZ_CP029657|CRISPRCasFinder matches to position: 2596101-2596131, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP029657_4 4.2|825145|23|NZ_CP029657|CRT 825145-825167 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP029657_4 4.4|825262|23|NZ_CP029657|CRT 825262-825284 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP029657_11 11.1|2278746|34|NZ_CP029657|CRISPRCasFinder 2278746-2278779 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
NZ_CP029657_11 11.1|2278746|34|NZ_CP029657|CRISPRCasFinder 2278746-2278779 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765

1. spacer 4.2|825145|23|NZ_CP029657|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

2. spacer 4.2|825145|23|NZ_CP029657|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

3. spacer 4.4|825262|23|NZ_CP029657|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

4. spacer 4.4|825262|23|NZ_CP029657|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

5. spacer 11.1|2278746|34|NZ_CP029657|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgcatatctttagctttatagcttttatatgct	Protospacer
******************** *.** .*  **  

6. spacer 11.1|2278746|34|NZ_CP029657|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgaataactttagctttattgttataaacagta	Protospacer
*** *** ****************   *** * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 756768 : 764589 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 776560 : 791201 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 876680 : 933611 84 Staphylococcus_phage(75.0%) capsid,transposase,terminase,head,tail,integrase,portal,plate,holin attL 874777:874793|attR 909431:909447
DBSCAN-SWA_4 1080179 : 1088652 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 1530103 : 1617627 104 Staphylococcus_phage(78.95%) capsid,protease,tRNA,terminase,head,tail,integrase,portal,plate,holin attL 1569127:1569144|attR 1616144:1616161
DBSCAN-SWA_6 1752528 : 1761571 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_7 1898907 : 1955408 58 Staphylococcus_phage(95.45%) transposase,protease,tRNA NA
DBSCAN-SWA_8 2049155 : 2142105 113 Staphylococcus_phage(84.62%) capsid,protease,tRNA,terminase,head,tail,integrase,portal,holin attL 2045592:2045616|attR 2144391:2144415
DBSCAN-SWA_9 2324573 : 2368272 62 Staphylococcus_phage(95.16%) capsid,protease,terminase,head,tail,integrase,portal,plate,holin attL 2328581:2328596|attR 2370039:2370054
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP029657.1|WP_000681968.1|2084914_2085091_-|hypothetical-protein 2084914_2085091_- 58 aa aa NA NA NA 2049155-2142105 yes
NZ_CP029657.1|WP_000990056.1|2085333_2085432_-|hypothetical-protein 2085333_2085432_- 32 aa aa NA NA NA 2049155-2142105 yes