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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP029673 Staphylococcus aureus strain AR_0220 chromosome, complete genome 8 crisprs cas3,DEDDh,DinG,csa3,RT,WYL 8 3 7 2
NZ_CP029672 Staphylococcus aureus strain AR_0220 plasmid unnamed1, complete sequence 0 crisprs csa3 0 0 0 0

Results visualization

1. NZ_CP029673
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029673_1 426856-426957 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029673_2 823154-823232 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029673_3 828608-828877 Unclear NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029673_4 871794-871875 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029673_5 1664495-1664579 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029673_6 2228121-2228201 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029673_7 2240442-2240527 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029673_8 2348484-2348564 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP029673_2 2.1|823178|31|NZ_CP029673|CRISPRCasFinder 823178-823208 31 NZ_CP029673.1 311784-311814 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 188575-188596 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 188633-188654 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 311709-311730 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 311819-311840 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 655280-655301 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 781304-781325 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 871867-871888 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 1393039-1393060 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 1664571-1664592 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 1679105-1679126 0 1.0
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 1996405-1996426 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 188575-188596 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 188633-188654 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 311709-311730 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 311819-311840 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 655280-655301 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 781304-781325 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 871867-871888 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 1393039-1393060 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 1664571-1664592 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 1679105-1679126 0 1.0
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 1996405-1996426 0 1.0
NZ_CP029673_2 2.1|823178|31|NZ_CP029673|CRISPRCasFinder 823178-823208 31 NZ_CP029673.1 311729-311759 1 0.968
NZ_CP029673_2 2.1|823178|31|NZ_CP029673|CRISPRCasFinder 823178-823208 31 NZ_CP029673.1 1698977-1699007 1 0.968
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 942096-942117 1 0.955
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 1698832-1698853 1 0.955
NZ_CP029673_3 3.1|828644|22|NZ_CP029673|CRT 828644-828665 22 NZ_CP029673.1 1699065-1699086 1 0.955
NZ_CP029673_3 3.2|828702|23|NZ_CP029673|CRT 828702-828724 23 NZ_CP029673.1 782476-782498 1 0.957
NZ_CP029673_3 3.2|828702|23|NZ_CP029673|CRT 828702-828724 23 NZ_CP029673.1 1393155-1393177 1 0.957
NZ_CP029673_3 3.2|828702|23|NZ_CP029673|CRT 828702-828724 23 NZ_CP029673.1 1996463-1996485 1 0.957
NZ_CP029673_3 3.2|828702|23|NZ_CP029673|CRT 828702-828724 23 NZ_CP029673.1 2337655-2337677 1 0.957
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 942096-942117 1 0.955
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 1698832-1698853 1 0.955
NZ_CP029673_3 3.3|828761|22|NZ_CP029673|CRT 828761-828782 22 NZ_CP029673.1 1699065-1699086 1 0.955
NZ_CP029673_3 3.4|828819|23|NZ_CP029673|CRT 828819-828841 23 NZ_CP029673.1 782476-782498 1 0.957
NZ_CP029673_3 3.4|828819|23|NZ_CP029673|CRT 828819-828841 23 NZ_CP029673.1 1393155-1393177 1 0.957
NZ_CP029673_3 3.4|828819|23|NZ_CP029673|CRT 828819-828841 23 NZ_CP029673.1 1996463-1996485 1 0.957
NZ_CP029673_3 3.4|828819|23|NZ_CP029673|CRT 828819-828841 23 NZ_CP029673.1 2337655-2337677 1 0.957
NZ_CP029673_4 4.1|871818|34|NZ_CP029673|CRISPRCasFinder 871818-871851 34 NZ_CP029673.1 1393135-1393168 1 0.971
NZ_CP029673_5 5.1|1664521|33|NZ_CP029673|CRISPRCasFinder 1664521-1664553 33 NZ_CP029673.1 1393136-1393168 1 0.97
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 835896-835926 1 0.968
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 835952-835982 1 0.968
NZ_CP029673_3 3.2|828702|23|NZ_CP029673|CRT 828702-828724 23 NZ_CP029673.1 1482991-1483013 2 0.913
NZ_CP029673_3 3.2|828702|23|NZ_CP029673|CRT 828702-828724 23 NZ_CP029673.1 2098952-2098974 2 0.913
NZ_CP029673_3 3.4|828819|23|NZ_CP029673|CRT 828819-828841 23 NZ_CP029673.1 1482991-1483013 2 0.913
NZ_CP029673_3 3.4|828819|23|NZ_CP029673|CRT 828819-828841 23 NZ_CP029673.1 2098952-2098974 2 0.913
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 88408-88438 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 388117-388147 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 655335-655365 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 836008-836038 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 872130-872160 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 1038094-1038124 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 1185477-1185507 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 1393094-1393124 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 1483044-1483074 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 1679159-1679189 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 1995057-1995087 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 2337708-2337738 2 0.935
NZ_CP029673_8 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder 2348509-2348539 31 NZ_CP029673.1 2513058-2513088 2 0.935

1. spacer 2.1|823178|31|NZ_CP029673|CRISPRCasFinder matches to position: 311784-311814, mismatch: 0, identity: 1.0

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattgcc	Protospacer
*******************************

2. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 188575-188596, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

3. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 188633-188654, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

4. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 311709-311730, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

5. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 311819-311840, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

6. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 655280-655301, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

7. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 781304-781325, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

8. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 871867-871888, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

9. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 1393039-1393060, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

10. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 1664571-1664592, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

11. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 1679105-1679126, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

12. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 1996405-1996426, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

13. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 188575-188596, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

14. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 188633-188654, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

15. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 311709-311730, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

16. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 311819-311840, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

17. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 655280-655301, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

18. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 781304-781325, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

19. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 871867-871888, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

20. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 1393039-1393060, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

21. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 1664571-1664592, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

22. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 1679105-1679126, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

23. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 1996405-1996426, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

24. spacer 2.1|823178|31|NZ_CP029673|CRISPRCasFinder matches to position: 311729-311759, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattacc	Protospacer
****************************.**

25. spacer 2.1|823178|31|NZ_CP029673|CRISPRCasFinder matches to position: 1698977-1699007, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttccattgcc	Protospacer
*********************** *******

26. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 942096-942117, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

27. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 1698832-1698853, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

28. spacer 3.1|828644|22|NZ_CP029673|CRT matches to position: 1699065-1699086, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

29. spacer 3.2|828702|23|NZ_CP029673|CRT matches to position: 782476-782498, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

30. spacer 3.2|828702|23|NZ_CP029673|CRT matches to position: 1393155-1393177, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

31. spacer 3.2|828702|23|NZ_CP029673|CRT matches to position: 1996463-1996485, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

32. spacer 3.2|828702|23|NZ_CP029673|CRT matches to position: 2337655-2337677, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

33. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 942096-942117, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

34. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 1698832-1698853, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

35. spacer 3.3|828761|22|NZ_CP029673|CRT matches to position: 1699065-1699086, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

36. spacer 3.4|828819|23|NZ_CP029673|CRT matches to position: 782476-782498, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

37. spacer 3.4|828819|23|NZ_CP029673|CRT matches to position: 1393155-1393177, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

38. spacer 3.4|828819|23|NZ_CP029673|CRT matches to position: 1996463-1996485, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

39. spacer 3.4|828819|23|NZ_CP029673|CRT matches to position: 2337655-2337677, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

40. spacer 4.1|871818|34|NZ_CP029673|CRISPRCasFinder matches to position: 1393135-1393168, mismatch: 1, identity: 0.971

attgagaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
****.*****************************

41. spacer 5.1|1664521|33|NZ_CP029673|CRISPRCasFinder matches to position: 1393136-1393168, mismatch: 1, identity: 0.97

attgggaatccaatttctctgtgttggggccca	CRISPR spacer
attgggaatccaatttctctttgttggggccca	Protospacer
******************** ************

42. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 835896-835926, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

43. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 835952-835982, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

44. spacer 3.2|828702|23|NZ_CP029673|CRT matches to position: 1482991-1483013, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

45. spacer 3.2|828702|23|NZ_CP029673|CRT matches to position: 2098952-2098974, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

46. spacer 3.4|828819|23|NZ_CP029673|CRT matches to position: 1482991-1483013, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

47. spacer 3.4|828819|23|NZ_CP029673|CRT matches to position: 2098952-2098974, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

48. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 88408-88438, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

49. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 388117-388147, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

50. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 655335-655365, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

51. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 836008-836038, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

52. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 872130-872160, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

53. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 1038094-1038124, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

54. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 1185477-1185507, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

55. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 1393094-1393124, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

56. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 1483044-1483074, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

57. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 1679159-1679189, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

58. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 1995057-1995087, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

59. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 2337708-2337738, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

60. spacer 8.1|2348509|31|NZ_CP029673|CRISPRCasFinder matches to position: 2513058-2513088, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP029673_3 3.2|828702|23|NZ_CP029673|CRT 828702-828724 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP029673_3 3.2|828702|23|NZ_CP029673|CRT 828702-828724 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP029673_3 3.4|828819|23|NZ_CP029673|CRT 828819-828841 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP029673_3 3.4|828819|23|NZ_CP029673|CRT 828819-828841 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP029673_7 7.1|2240468|34|NZ_CP029673|CRISPRCasFinder 2240468-2240501 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
NZ_CP029673_7 7.1|2240468|34|NZ_CP029673|CRISPRCasFinder 2240468-2240501 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765

1. spacer 3.2|828702|23|NZ_CP029673|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

2. spacer 3.2|828702|23|NZ_CP029673|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

3. spacer 3.4|828819|23|NZ_CP029673|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

4. spacer 3.4|828819|23|NZ_CP029673|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

5. spacer 7.1|2240468|34|NZ_CP029673|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgcatatctttagctttatagcttttatatgct	Protospacer
******************** *.** .*  **  

6. spacer 7.1|2240468|34|NZ_CP029673|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgaataactttagctttattgttataaacagta	Protospacer
*** *** ****************   *** * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 760382 : 768203 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 780174 : 794759 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 1039604 : 1048077 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 1101403 : 1183195 100 Staphylococcus_phage(68.18%) tRNA,head,tail,capsid,transposase,portal,holin,terminase,plate NA
DBSCAN-SWA_5 1714164 : 1723207 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_6 1853349 : 1915558 59 Staphylococcus_phage(95.65%) protease,tRNA NA
DBSCAN-SWA_7 2009302 : 2103835 112 Staphylococcus_phage(86.67%) tRNA,integrase,head,tail,capsid,protease,portal,holin,terminase attL 2005739:2005763|attR 2106121:2106145
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP029673.1|WP_000681968.1|2045061_2045238_-|hypothetical-protein 2045061_2045238_- 58 aa aa NA NA NA 2009302-2103835 yes
NZ_CP029673.1|WP_000990056.1|2045480_2045579_-|hypothetical-protein 2045480_2045579_- 32 aa aa NA NA NA 2009302-2103835 yes