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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP029739 Klebsiella pneumoniae strain AR_0087 plasmid unnamed1, complete sequence 0 crisprs WYL,RT 0 0 2 0
NZ_CP029738 Klebsiella pneumoniae strain AR_0087 chromosome, complete genome 1 crisprs cas3,RT,csa3,DinG,WYL,DEDDh 0 0 9 0
NZ_CP029740 Klebsiella pneumoniae strain AR_0087 plasmid unnamed2, complete sequence 0 crisprs RT 0 0 2 0

Results visualization

1. NZ_CP029739
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2774 : 76133 56 Salmonella_phage(27.27%) transposase NA
DBSCAN-SWA_2 79259 : 165260 58 Salmonella_phage(21.74%) transposase,integrase attL 112358:112405|attR 121839:121886

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP029738
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029738_1 2444497-2444591 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 679676 : 689091 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_2 863733 : 952483 100 Klebsiella_phage(62.96%) holin,tRNA,head,integrase,portal,plate,capsid,tail,protease,terminase attL 934160:934175|attR 956753:956768
DBSCAN-SWA_3 1108941 : 1155079 54 Enterobacteria_phage(54.55%) tRNA,head,integrase,portal,plate,capsid,tail,terminase attL 1114169:1114186|attR 1151345:1151362
DBSCAN-SWA_4 1417567 : 1427041 8 Brazilian_cedratvirus(16.67%) protease,tRNA NA
DBSCAN-SWA_5 1916260 : 1964413 72 Cronobacter_phage(27.66%) tRNA,head,integrase,lysis,terminase attL 1910603:1910649|attR 1961484:1961530
DBSCAN-SWA_6 4290462 : 4362308 60 Escherichia_phage(84.85%) transposase,tRNA NA
DBSCAN-SWA_7 5004804 : 5011707 6 Planktothrix_phage(33.33%) tRNA NA
DBSCAN-SWA_8 5052271 : 5060650 9 Enterobacteria_phage(28.57%) NA NA
DBSCAN-SWA_9 5282359 : 5332782 71 uncultured_Caudovirales_phage(27.59%) terminase,integrase,lysis attL 5286453:5286468|attR 5334535:5334550

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP029740
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 23235 : 34765 16 Stx2-converting_phage(37.5%) transposase NA
DBSCAN-SWA_2 43972 : 54997 14 Escherichia_phage(37.5%) integrase attL 49870:49882|attR 56590:56602

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage