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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP021413 Leptospira borgpetersenii serovar Hardjo-bovis strain 203 chromosome II, complete sequence 0 crisprs csa3 0 0 1 0
NZ_CP021412 Leptospira borgpetersenii serovar Hardjo-bovis strain 203 chromosome I, complete sequence 2 crisprs WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,csa3,DinG,Cas9_archaeal 0 1 10 0

Results visualization

1. NZ_CP021413
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 79120 : 152915 44 Leptospira_phage(28.57%) integrase,protease,transposase attL 106216:106231|attR 139880:139895
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP021412
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021412_1 2031667-2031741 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021412_2 3003162-3003269 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP021412_1 1.1|2031690|29|NZ_CP021412|CRISPRCasFinder 2031690-2031718 29 NZ_CP014852 Bacillus thuringiensis strain HD12 plasmid pHD120161, complete sequence 43605-43633 8 0.724
NZ_CP021412_1 1.1|2031690|29|NZ_CP021412|CRISPRCasFinder 2031690-2031718 29 NC_018487 Bacillus thuringiensis HD-771 plasmid p03, complete sequence 38173-38201 8 0.724

1. spacer 1.1|2031690|29|NZ_CP021412|CRISPRCasFinder matches to NZ_CP014852 (Bacillus thuringiensis strain HD12 plasmid pHD120161, complete sequence) position: , mismatch: 8, identity: 0.724

tcaacacgttagttgaaaaatagagcgaa	CRISPR spacer
acaacacgttagttgaagaatacggttct	Protospacer
 ****************.**** .*.   

2. spacer 1.1|2031690|29|NZ_CP021412|CRISPRCasFinder matches to NC_018487 (Bacillus thuringiensis HD-771 plasmid p03, complete sequence) position: , mismatch: 8, identity: 0.724

tcaacacgttagttgaaaaatagagcgaa	CRISPR spacer
acaacacgttagttgaagaatacggttct	Protospacer
 ****************.**** .*.   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 80459 58 Bacillus_virus(22.22%) protease,tRNA,transposase NA
DBSCAN-SWA_2 390769 : 457146 49 Prochlorococcus_phage(20.0%) transposase NA
DBSCAN-SWA_3 506819 : 567663 54 Heterosigma_akashiwo_virus(16.67%) tRNA,transposase NA
DBSCAN-SWA_4 910678 : 981504 56 Pithovirus(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 1219756 : 1275055 44 Moraxella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_6 1643235 : 1737272 55 Hokovirus(18.18%) protease,tRNA,transposase NA
DBSCAN-SWA_7 2230046 : 2290542 53 Bodo_saltans_virus(33.33%) tRNA,transposase NA
DBSCAN-SWA_8 2548372 : 2622509 55 uncultured_Mediterranean_phage(16.67%) protease,tRNA,transposase NA
DBSCAN-SWA_9 2937960 : 2970328 29 Leptospira_phage(100.0%) integrase,transposase attL 2937474:2937501|attR 2948363:2948390
DBSCAN-SWA_10 3089646 : 3163009 52 Cafeteria_roenbergensis_virus(11.11%) portal,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage