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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023566 Lactobacillus murinus strain CR141 chromosome, complete genome 1 crisprs cas14j,c2c9_V-U4,csa3,WYL,cas3,DEDDh,DinG 0 0 127 0

Results visualization

1. NZ_CP023566
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023566_1 260306-260484 TypeV-U4 NA
2 spacers
c2c9_V-U4

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 49855 56 Bacillus_phage(25.0%) bacteriocin,transposase,tRNA NA
DBSCAN-SWA_2 60691 : 64494 3 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_3 67592 : 74926 2 Phaeocystis_globosa_virus(50.0%) NA NA
DBSCAN-SWA_4 79290 : 241563 157 Bacillus_phage(17.95%) lysis,bacteriocin,transposase,integrase,protease attL 215013:215029|attR 240740:240756
DBSCAN-SWA_5 249926 : 252537 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_6 263114 : 269222 5 Clostridium_botulinum_C_phage(25.0%) transposase NA
DBSCAN-SWA_7 278734 : 279487 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_8 285141 : 289947 6 Bifidobacterium_phage(25.0%) NA NA
DBSCAN-SWA_9 293120 : 307770 15 Pandoravirus(28.57%) NA NA
DBSCAN-SWA_10 311453 : 312395 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_11 322241 : 324748 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_12 327971 : 329534 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_13 348324 : 350037 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_14 357698 : 359601 2 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_15 370372 : 372223 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_16 375343 : 440031 65 Bacillus_phage(27.27%) bacteriocin,transposase,tRNA NA
DBSCAN-SWA_17 444789 : 463507 23 Staphylococcus_virus(33.33%) bacteriocin,transposase NA
DBSCAN-SWA_18 488501 : 489422 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_19 493934 : 555175 58 Streptococcus_phage(28.57%) integrase,bacteriocin,transposase attL 505093:505145|attR 507801:507853
DBSCAN-SWA_20 562606 : 563785 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_21 568638 : 576542 6 Tetraselmis_virus(50.0%) NA NA
DBSCAN-SWA_22 579651 : 582315 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_23 588530 : 595517 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_24 600293 : 601544 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_25 617505 : 621627 4 Lactobacillus_virus(33.33%) protease NA
DBSCAN-SWA_26 636315 : 637971 1 Staphylococcus_virus(100.0%) transposase NA
DBSCAN-SWA_27 647912 : 652754 4 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_28 662950 : 663883 1 Oenococcus_phage(100.0%) NA NA
DBSCAN-SWA_29 667452 : 668568 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_30 675935 : 686943 11 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_31 698764 : 758177 50 Lactobacillus_phage(15.0%) transposase NA
DBSCAN-SWA_32 784808 : 797928 12 Planktothrix_phage(25.0%) NA NA
DBSCAN-SWA_33 801274 : 803677 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_34 819071 : 819272 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 829805 : 831092 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_36 839711 : 844544 5 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_37 847690 : 849103 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_38 857653 : 858658 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_39 867417 : 869649 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_40 885646 : 886750 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_41 894363 : 894792 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_42 901540 : 901951 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_43 914652 : 921062 5 uncultured_virus(33.33%) tRNA,protease NA
DBSCAN-SWA_44 927508 : 930196 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_45 934740 : 938935 3 Bacillus_virus(66.67%) NA NA
DBSCAN-SWA_46 948363 : 952944 6 Bacillus_phage(66.67%) transposase NA
DBSCAN-SWA_47 957585 : 958995 1 Moumouvirus(100.0%) tRNA NA
DBSCAN-SWA_48 974572 : 975124 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_49 984550 : 991506 7 Enterococcus_phage(66.67%) NA NA
DBSCAN-SWA_50 995126 : 1003870 4 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_51 1009143 : 1010184 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_52 1013714 : 1018983 3 Enterococcus_phage(33.33%) NA NA
DBSCAN-SWA_53 1026907 : 1030761 5 Enterococcus_phage(50.0%) NA NA
DBSCAN-SWA_54 1035684 : 1040372 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_55 1044295 : 1044823 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_56 1048425 : 1053983 4 Streptococcus_phage(50.0%) protease NA
DBSCAN-SWA_57 1061480 : 1063544 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_58 1077856 : 1081471 5 Pandoravirus(50.0%) tRNA NA
DBSCAN-SWA_59 1088718 : 1089246 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_60 1095345 : 1097778 1 Iris_mild_mosaic_virus(100.0%) NA NA
DBSCAN-SWA_61 1102441 : 1104026 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_62 1114329 : 1115891 2 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_63 1132409 : 1139739 5 Amsacta_moorei_entomopoxvirus(33.33%) transposase NA
DBSCAN-SWA_64 1143375 : 1144113 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_65 1161246 : 1162969 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_66 1170900 : 1177866 3 Staphylococcus_phage(66.67%) tRNA NA
DBSCAN-SWA_67 1188131 : 1209560 16 Staphylococcus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_68 1222450 : 1227449 4 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_69 1231890 : 1250049 21 Streptococcus_phage(37.5%) integrase,transposase,tRNA attL 1227427:1227449|attR 1238086:1238108
DBSCAN-SWA_70 1254366 : 1255107 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_71 1267345 : 1272161 2 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_72 1286566 : 1290130 4 Lactobacillus_virus(33.33%) NA NA
DBSCAN-SWA_73 1300468 : 1310574 12 Staphylococcus_phage(16.67%) NA NA
DBSCAN-SWA_74 1314973 : 1315816 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_75 1324270 : 1328175 5 Bacillus_phage(100.0%) transposase NA
DBSCAN-SWA_76 1335981 : 1344258 7 Faustovirus(33.33%) tRNA NA
DBSCAN-SWA_77 1349545 : 1350184 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_78 1367645 : 1370441 1 Klosneuvirus(100.0%) tRNA NA
DBSCAN-SWA_79 1376231 : 1378625 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_80 1382639 : 1383194 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_81 1394687 : 1396417 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_82 1403658 : 1411686 6 Bacillus_phage(40.0%) protease NA
DBSCAN-SWA_83 1424752 : 1428761 3 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_84 1432483 : 1439896 9 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_85 1444379 : 1447285 4 Listeria_phage(50.0%) NA NA
DBSCAN-SWA_86 1450667 : 1461964 11 Pseudomonas_phage(40.0%) NA NA
DBSCAN-SWA_87 1477908 : 1487351 8 Mollivirus(25.0%) tRNA NA
DBSCAN-SWA_88 1494169 : 1498330 4 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_89 1507090 : 1520077 15 Bacillus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_90 1525372 : 1527595 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_91 1533015 : 1535207 2 Enterococcus_phage(50.0%) NA NA
DBSCAN-SWA_92 1539559 : 1543997 7 Bacillus_phage(33.33%) tRNA NA
DBSCAN-SWA_93 1548016 : 1550662 4 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_94 1555274 : 1556717 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_95 1561412 : 1565379 5 Geobacillus_virus(50.0%) NA NA
DBSCAN-SWA_96 1579453 : 1581988 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_97 1586525 : 1593178 5 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_98 1597923 : 1598526 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_99 1606649 : 1613075 6 Bodo_saltans_virus(25.0%) NA NA
DBSCAN-SWA_100 1628588 : 1671050 37 Bacillus_virus(13.33%) integrase,tRNA,transposase,protease attL 1625327:1625342|attR 1673339:1673354
DBSCAN-SWA_101 1683037 : 1826223 148 Lactobacillus_phage(19.23%) integrase,protease,transposase,tRNA attL 1710926:1710985|attR 1820599:1821669
DBSCAN-SWA_102 1830426 : 1894824 57 Streptococcus_phage(14.29%) integrase,transposase,tRNA attL 1861892:1861908|attR 1872130:1872146
DBSCAN-SWA_103 1901604 : 1903302 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_104 1906411 : 2033764 131 Lactobacillus_phage(24.19%) tail,portal,holin,capsid,tRNA,transposase,integrase attL 2018482:2018541|attR 2024865:2024935
DBSCAN-SWA_105 2038868 : 2041016 2 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_106 2044323 : 2051485 6 uncultured_virus(50.0%) tRNA,protease NA
DBSCAN-SWA_107 2054768 : 2068475 16 Streptococcus_phage(57.14%) transposase NA
DBSCAN-SWA_108 2072562 : 2092476 22 Lactobacillus_phage(22.22%) transposase,protease NA
DBSCAN-SWA_109 2098454 : 2107521 9 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_110 2111975 : 2116202 2 Serratia_phage(50.0%) NA NA
DBSCAN-SWA_111 2119792 : 2120392 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_112 2124888 : 2127381 2 Bodo_saltans_virus(50.0%) NA NA
DBSCAN-SWA_113 2130656 : 2133132 4 Bacillus_phage(66.67%) transposase NA
DBSCAN-SWA_114 2144274 : 2150977 6 Only_Syngen_Nebraska_virus(33.33%) NA NA
DBSCAN-SWA_115 2157258 : 2162646 5 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_116 2170263 : 2171670 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_117 2179679 : 2182334 2 Klosneuvirus(50.0%) tRNA NA
DBSCAN-SWA_118 2201500 : 2202610 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_119 2207531 : 2208239 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_120 2215430 : 2216114 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_121 2221989 : 2223246 1 Pectobacterium_phage(100.0%) tRNA NA
DBSCAN-SWA_122 2230535 : 2231651 1 Yellowstone_lake_mimivirus(100.0%) NA NA
DBSCAN-SWA_123 2238596 : 2242053 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_124 2253455 : 2259428 4 Paenibacillus_phage(66.67%) transposase NA
DBSCAN-SWA_125 2263831 : 2270541 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_126 2273959 : 2275351 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_127 2279854 : 2285913 4 Tupanvirus(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage