CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP030776	Clostridium butyricum strain S-45-5 chromosome 2, complete sequence	2 crisprs	DEDDh,RT,WYL,csa3	0	2	1	0
NZ_CP030775	Clostridium butyricum strain S-45-5 chromosome 1, complete sequence	7 crisprs	WYL,DinG,DEDDh,cas3,csa3,csx1	0	1	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP030776_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030776_1

565095-565206

Orphan

Consensus_repeat	Method
TTACTAAAATCACCGTTCGCAAGGGTAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030776_1

>merge|NZ_CP030776|1|565095-565206|CRISPRCasFinder
GACCAAAACCCACCGTTCGCGAGGGTAAAAAACAAAATTCAACTCCTTTTTACTATTATTTTTATTAAAAATTGCGTTTCGTGACTTGTATTTCCGTTCGCAAGGGTAAAAA

>NZ_CP030776|1|1|565095-565206|CRISPRCasFinder
GACCAAAACCCACCGTTCGCGAGGGTAAAA	AACAAAATTCAACTCCTTTTTACTATTATTTTTATTAAAAATTGCGTTTCG
TGACTTGTATTTCCGTTCGCAAGGGTAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030776.1\|WP_003430828.1\|569961_570936_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_CP030776.1\|WP_002581756.1\|565658_566771_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030776.1\|WP_003430862.1\|573688_574198_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP030776.1\|WP_043853805.1\|556012_556558_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP030776.1\|WP_002581758.1\|561223_562885_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP030776.1\|WP_002581763.1\|556613_557090_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207
NZ_CP030776.1\|WP_002581751.1\|572925_573618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030776.1\|WP_113886521.1\|576734_578645_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP030776.1\|WP_043853806.1\|560192_560963_-\|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl\|CDD\|274139
NZ_CP030776.1\|WP_003411363.1\|563171_564635_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030776.1\|WP_002581762.1\|557708_558023_-\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|179494
NZ_CP030776.1\|WP_043853808.1\|568845_569853_-\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|319265
NZ_CP030776.1\|WP_002581760.1\|559340_560183_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP030776.1\|WP_002581761.1\|558024_558771_-\|energy-coupling-factor-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181384
NZ_CP030776.1\|WP_002581749.1\|574526_575741_-\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_CP030776.1\|WP_057089035.1\|555088_555952_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223566
NZ_CP030776.1\|WP_002581752.1\|571770_572922_+\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669
NZ_CP030776.1\|WP_002581755.1\|567743_568697_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|334163
NZ_CP030776.1\|WP_003430867.1\|578765_579614_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP030776.1\|WP_043853927.1\|554543_554966_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99906

Protein	Function_ID	Function_description	E-value
NZ_CP030776.1\|WP_003430828.1\|569961_570936_-\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.37007e-48
NZ_CP030776.1\|WP_002581758.1\|561223_562885_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.29576e-40
NZ_CP030776.1\|WP_003430862.1\|573688_574198_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	7.70205e-06
NZ_CP030776.1\|WP_043853805.1\|556012_556558_-\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	7.17774e-78
NZ_CP030776.1\|WP_043853806.1\|560192_560963_-\|cobalt-ECF-transporter-T-component-CbiQ	gnl\|CDD\|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	1.80236e-34
NZ_CP030776.1\|WP_002581763.1\|556613_557090_-\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	5.12289e-96
NZ_CP030776.1\|WP_003430867.1\|578765_579614_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	5.04127e-11
NZ_CP030776.1\|WP_002581762.1\|557708_558023_-\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	gnl\|CDD\|179494	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein.	3.26606e-24
NZ_CP030776.1\|WP_113886521.1\|576734_578645_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP030776.1\|WP_043853808.1\|568845_569853_-\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|319265	cd16408, ParB_N_like, ParB N-terminal, parA -binding, -like domain of bacterial and plasmid parABS partitioning systems. This family represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	2.64931e-17
NZ_CP030776.1\|WP_002581760.1\|559340_560183_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	4.25826e-97
NZ_CP030776.1\|WP_002581761.1\|558024_558771_-\|energy-coupling-factor-ABC-transporter-permease	gnl\|CDD\|181384	PRK08319, PRK08319, energy-coupling factor ABC transporter permease.	6.40713e-110
NZ_CP030776.1\|WP_002581749.1\|574526_575741_-\|sodium/glutamate-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	5.38216e-124
NZ_CP030776.1\|WP_057089035.1\|555088_555952_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	1.08081e-64
NZ_CP030776.1\|WP_002581752.1\|571770_572922_+\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	3.66073e-26
NZ_CP030776.1\|WP_002581755.1\|567743_568697_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	2.94475e-14
NZ_CP030776.1\|WP_043853927.1\|554543_554966_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	2.31801e-16

>NZ_CP030776.1|WP_003411363.1|563171_564635_-|hypothetical-protein
MDKDDRLFKEDMIKLFKNVYEVLVKKEKFTDFYETLDNDLANLKDTGKREVIYKNLTNSIKRTKTRWLNKYVNGSNNSLSEDIEYAEHFYKRVLEGVYEPDKFVMIYGVNNIDEYKKKMFNELYTWRDNEDALLSSYKYIGTFQKRSITLAFRSDILKLYYDFLTNNAKSVITIPSVLSNFSIDTTNKKDYLKDDEKEFLDDNLSLEGTIDRLIVNKENQQKLLMKLEKQVYLRIEEGKDSLDIITQIALLKAIKQLNSLDTRIISHYYTHFYNIVADKSVDKYIGDLVSELGLSDSKKNTDAVIKSLLKIGSIRLESENYEGREIKGTLFEVSISERDGRKFAQVFLGGFLRTLIIMDSSFNFNKDVFDLLSNDAQQIAIWLQNRRLKMVLESEDFKDVIAIQRFTDAILMSTKSIYKKRDRIINALDELKQYKLIVKNYEYIKKNYEFVISYIELPESVIKKIKNKEFKTGELIEGQIHADYTVE
>NZ_CP030776.1|WP_002581758.1|561223_562885_-|HAMP-domain-containing-histidine-kinase
MKNIKNDLKVIGIIFLFCIMYSSIVREEFSILNILSIIDVLIIFCFVLYIISAVATYSLKLKYINNLYRYLSICFLSVGMLSFSYICFKKQIHINNGFENSCISIEILAAILESCYLIYCFSNYKNNINTKRFLAGTLLISICTIYICSALSILPLYEVDNLYIKSIILICFSICILLKIYLLRVIKKSGTDITESMALYLKMYMYLSIISIIIELNVYMNISSELIFIYYLIRALSSYCIVKIILVEILKTPQEYLYKNLVKKSEDLEATILELKKTIDDKNIIYKDYEKRTKHEEVKNEVLANISHEFKTPVNVIYSAVQTQDLIKNTANIEELLKYNKIIKQNCNRLTRLINNFIDTTRFEKENVKTEFTCENIVEITEYLTMCVVPFANSKKLNLIFDTSDEELYSLIDKELYDRMILNLLSNAIKYSRINGNIKVMIKDDNKFIKITIEDDGIGIDKYHLKDIFSIFERVDKSYSRNTEGSGLGLNIAKKIIDIHNGNISIESIKEKGTSVIVSIPKCSEKYVDNISHRLQDNTYVKYEVEVEMSDIY
>NZ_CP030776.1|WP_043853806.1|560192_560963_-|cobalt-ECF-transporter-T-component-CbiQ
MERKIDSYAYKSKLRKINPAFKVIFAFLTLLICIIADNIYVSLAIIVSMGFITIFKGGIKFHEYMSLMSIPVVFMILGSIAIAFGVSMSPIGDYNLHLCGFYLYTSDENIMKTMEIVMKAFGAISAMYMMTLSTNTSEIISVLRKAHIPKIIIELMNMIYRFIFILIDVQCKMKNSAQSRLGYIDFKTSCYSFGSTASKLLIVSLKKANTYYNAMESRCYNGDMLFLEEEKKVKTIHVVLACIYFSILIFIWYIAK
>NZ_CP030776.1|WP_002581760.1|559340_560183_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MDDKIKEIILQIKELCYSYMGEKNTLNNINLNIHRGEKIAVLGSNGAGKSTFFLNINGVLTPKSGKIIYKGKAITKKNLNELRKNIGIVFQDADNQIIASTVLAEVSFGPMNLKLPKDEVIKRVNEALDYMNISEFKERPPHYLSGGEKKRVSIADIIAMKSEVIIFDEPTAALDPLNAEMLEEVLKKLSLENKTLLISTHDVDFAYRWADRVVVFSKGGIIGDGTPLEIFKNEKILKNSNLKRPIMLDVYETLIEKRILTNDNLYPKNINEFKKIFNKY
>NZ_CP030776.1|WP_002581761.1|558024_558771_-|energy-coupling-factor-ABC-transporter-permease
MKNQNKIIKIAILLVLMFGITPAANAMHIMEGYLPAKYCIGWGIICLPFLIGGFLSIKKSLDKDRKSVTILAMAGAFIFVISSLKIPSVTGSCSHMTGTGLGAILFGPLAVSVLGIIVLIFQAILLAHGGITTLGANTFSMSIAGPLLSFGLYKLCVKLKINRKVSVFIAAALGDLFTYCITSFQLAMAYPSPEGGVFASAVKFLGVFAPTQLPLAIIEGILTVIVIIGLETYAKSELTGLGFLKEEK
>NZ_CP030776.1|WP_002581762.1|557708_558023_-|energy-coupling-factor-ABC-transporter-substrate-binding-protein
MTKNKKTVIILLIIALAIAIIPLFALKGAEFGGSDDAGSVMVEEINGEAYEPWFTPVMETWIDGELPGEVESLLFCVQTGIGVGIFAFFMGRFVERKKWENKKE
>NZ_CP030776.1|WP_002581763.1|556613_557090_-|glutathione-peroxidase
MEFYDLSATKMNGRKVSMEEYRGKVVLVVNTASKCGLTPQFTELEELYNEYKDNGFEVLGFPCNQFAKQDPGSNKEIGEFCLRNYGVSFTMFEKIDVNGQNTHPIYKFLKNEAGGLIGRDIKWNFTKFLIDSEGNVIKRYSPITKPSSIKKDIYSLIK
>NZ_CP030776.1|WP_043853805.1|556012_556558_-|glutathione-peroxidase
MNIYDYKYKEISGKEVLLEDYRNKAIVIVNIASKCGFTPQLEDLQKIYEKYKEHGFEIIGFPSNQFNEQSPGSNSDLNTFCKRNYGVTFNLSEKIDVRGSNSHPLFNYLTEKCPFKGFNKENITEKMLYSITEENYPEYLVGDSIKWNFTKFLVDKNGNVVKRYESHIEPLDMIKDIEELL
>NZ_CP030776.1|WP_057089035.1|555088_555952_-|NAD(P)/FAD-dependent-oxidoreductase
MERYDLAIIGSGPAGVSAALNAKIRKKNFIIFGSKELSNKLTKAEKINNYLGFYGKSGAQIRDEFIKHMESMDISITEEKINNIYAMGDYFTLMANDKMYEASAIILATGVNFGRPFKGEEELLGKGVGYCATCDAPLYKDKIVTIIAYNKHEEDEVNFISTIASKVYYIPMYKEKVEVDEKVQIINDIPVEIIGKERVEKLILKNSEIETDGIFILRDSVSPSQLVPGLELDENNVKVDRKMTTNLQGCFAAGDIVGAPYQYIKAAGEGNIAALSAVSYIDNLNKK
>NZ_CP030776.1|WP_043853927.1|554543_554966_-|PTS-sugar-transporter-subunit-IIB
MIKILICCLGGFSSSAMVKKVKSEIIENNLQKEMSVDFSPFMNANKLYHEYDVIMVCPHTRYEVNGFVKKHYDLNIPIYVLPPKMYGQMNAKELYIDAVDIIDGYNDSKTNPWHFKGEEEIMTVQRACSYRHFKKLSKLK
>NZ_CP030776.1|WP_002581756.1|565658_566771_+|hypothetical-protein
MSTKLSNEHITRISKDCNEYKILDVYIILAHISSEVKSGKYLIQSYSSKKSDLINIVHKYCPKAAYKTIHNCIEKLEFMNILIYDESLCAWCLKNMENMTKSKDEAETLEERETLTGYTNIRKFFLTDEFFNMKAREKRVIIYICQLLDSKASRNYKNISINLLKFNSSWLKILKTKCKYYAKNTIENMLEKYKDIFNDFSSLVREKDIAPKTVTSFKFTFTCESLNNRNSEEDMLELIKLKNPKEYSLVKDKVEFAQITLSKQKIMHIVRAISTIKEWFLKERVTQLIINKYIAIQIHHSRENIKSLPAYSAAVVKAVVNEYNDFKEKFNKHSSDSHINNYYDTYIENDSFSSTVTEDIQYALSMLKAV
>NZ_CP030776.1|WP_002581755.1|567743_568697_+|tyrosine-type-recombinase/integrase
MNITKKQFEEFPKVDYIFGEYMYKYKMHMDKEYRCFSKDDTFIDVKKIKAWQHSYKINYYNIMLFDKYLYMQYKDTDFSIRDIREIHIQEFLDFSYNVMKNKPITINQKLVSLRMIMKYICKYYNVLPYNIALMVPKLKIDSVKPTSISYSDIKKILSILREKNYGIRDVCICKIIMTTGMKITSVFNMKVNDVDLNNRLLKYDNLGKEFFYPIQDTLYNDLCSYMDFRSSINPKCNNLFVNSSGKPKNIRSFQIAFRNAVIKADLDEAYTAQNLRASFLYEMGRILNDENELSELTDQKIVKQYIALKENHFNDII
>NZ_CP030776.1|WP_043853808.1|568845_569853_-|ParB-N-terminal-domain-containing-protein
MVKKNNNSTFNLRTNRNTEKKSSGIASSFFSSNTNETHVDNDISHTSDAPNYTDSIVNHLVNASSGLDSVLVNIDDLYSAPDDWNFYDRLPAGKMQELIESIISIGLQEPVIVWKKDDSGKYMILSGHNRVHAYKILCENQDSEKYSKIHAVIKDKNLSEEEAKEIIVDTNWVQRQLTTIQKARSINFKYRKLKKDSLEKKLKFDINSVIADEYQITSRQLISYKSLGNLTETAQNAVDNAKLSIKAGVAISKLIPEDQDYIINNFDISILNKNYSKIKSACDSESGVVNKSKLSSLLTEEELGSITIKVPIEYKDSLIAEIEALKKKYNIKKIN
>NZ_CP030776.1|WP_003430828.1|569961_570936_-|AAA-family-ATPase
MKGKLYYKLIKDKRNELDITQKQICDELNIQLEEYKKMESGDFIPKKSSLNKICTYLKLDINEIYMENFRDTKVISVMSNKGGVGKTSVTSSVSFCLAELGYKVLCIDADMQGNLTHSFNLETDEEKNLAIALKNELDLKDCIINSQYENLDFVVYNTALSAIDMLMFTKNAREYILKRILTNTINEGLYDFVVIDTNPSLSILNFNVINVTNYCIVPVQLGAFGLEGVGILLNFIDDAKQFNPNFIDYKLVINNYDSRKSITKKSQEWLEENYGDILLESIIRVDTNIENAQVGSMPVLAYNSNCRISNEFRLLTKEILKIIK
>NZ_CP030776.1|WP_002581752.1|571770_572922_+|ParM/StbA-family-protein
MKKELYIAVDPGFDTVKVIANGQFFKFPFNTEKTDEKRISNMTVADDFILYRNKDNETWRIGQYARELIFEKKDSSDIEDKMKSFYSEKRFVSDEFTIGLRTAIAMAVLRLNLYKHLKDIKIYIMVALPHSVRDNYSTQVKSILCGSHDYFVKIGKEEEEEYTFVIEEDNIFTVSQTVASILGETSDDEGNIDEDKFYYLSDGPTLVIDGGFYTIGEVAVDRGGSINEEKTFSDINHAMKNINMEIAKELENQRPDIKYYVIEYLMTKNEGKLKYLKNGKAQIIDLNVLKKEKIKEMSSRFIESLNAKYNNLLDFNYVLVTGGTGARYYEHLKEYYVGKGIVEEDRLILTNNILNGKRFDIEYAIAAGAYKGLKGKVAVLVEQ
>NZ_CP030776.1|WP_002581751.1|572925_573618_+|hypothetical-protein
MKSERIGLRFSKKDEDIISWFLMLRENKIEQSFAVKALLKAFFLQETINGGSIKIRHNVKMEPTSIAINEIDLNDDIIKMKTKGIKLASFTKDIIRLYINISDIDKAPQISELQQIHTKYKLKYLNNIVYEQSQEIKVNIESLPEFKKNIINNIKNENNMIAEESNSNDKDINSNYENLVKEKSNMDMNFQSSSKITFFDEESKNLQEVSKSEKDKKVKSKKRNPLLAQI
>NZ_CP030776.1|WP_003430862.1|573688_574198_+|helix-turn-helix-transcriptional-regulator
MNYKYMNELKKFDNIDEFEKMDFVLLSNDVISNTIDNNLQKLLFAKRITISELSRKTGVSKQVISSSIVKNTKIDLDSAIKISRVLKTPIEDIFMLKKNSWVDVYIVNGKTVYLNMKTLTMVSSEEKNMYIKTHKVKYYNPIDDCLSYKKLNENYNELFIKVGKRIEQL
>NZ_CP030776.1|WP_002581749.1|574526_575741_-|sodium/glutamate-symporter
MELNFNIYETMALVSIVLYIGKYIRNKFSILSQYCIPPSVIGGFTFALLILIFKLTNICVINLDTLLQNIFMTAFFTSIGFTASIKVLKQGGIKVITFLCLAILLVILQNIVGVTLASIFKLTPLLGLCTGSIPMIGGHGTAGSFGPILENLGITGATTVSVASATFGLIMGSIIGGLVAKALIHNYKLKTIRDEYSEKPPSEVGDYNEENHNILSFKKLTNGACLLFIAMGIGSVVSDFIQKTGLTFPSYIGAMIVAAIIRNIYDFTDKEIVEKEIETLGGLSLSFFLTMALMGLKLWQLFDLALPLMIMLFAQVILVGLFAYFITYKVMGKNYEAAVFASATCGFGMGATPNAIANMDELTNRYGFVHTPYFVVPIVGCLFIDFVNSGIITIFINFISYNIY
>NZ_CP030776.1|WP_113886521.1|576734_578645_+|threonine--tRNA-ligase
MLINIKLKDGSIKEIEDNSTVFDLAQSISRNLGKSALVGEVNGCLVDLNYKLKNNDEVNILSYDSEKAVEVIRHSSAHIMAQAVKRLYKNAKLAIGPSIANGFYYDFDIDTPIIKEDLEKIEKEMNKIVKENLKFERIDVSKEEALKIMKDNDEIYKVELINDLPEGEKISLYKQGDYIDLCRGPHIPSTKYAKAFKLISVAGAYWRGNEKNKMLQRVYGIAFSNLKELEIHLHNLEEAKKRDHRKLGKELKLFTFAEEGPGFPFFLPKGVILKNSLIDFWRKIHYEAGYVEVETPIMLNKKLWETSGHWYHYKENMYTSMIDDEEFALKPMNCPGGMIVYKSDSHSYRDFPMRVGELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKSEIKGVVELIDKVYSIFGFKYHVELSTRPEDSMGSDEEWQMAEDSLRGALDELNLQYVINEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQLPQRFELEYVGSDNEKHRPIVIHRVIFGSIERFIGILIEHFAGKFPTWLAPVQVKVLPISDKFNNYCDEVVKQFYENGIRIEIDHRNEKIGYKIREARNERVPYIVIIGEKEEEEGNVSLRSRKNGDEGSINVIDLIERINNEIKNKYI
>NZ_CP030776.1|WP_003430867.1|578765_579614_-|pentapeptide-repeat-containing-protein
MKYTIDELYSKELKCHCENCFGLCCTALFFSACDGFPQNKDAGKPCINLKQDFTCSIHNTLFKKRLKGCISYECFGAGQKIAQKTFNKISWRKDPQSASKMFDTFLIIRQIHEMLWYLVQSYTLEKNNKIKSKIESLIDDTIKVSLWDVDKLLNLDLESYRDKVNVYLKTTSETIRKKFKVYSTNSLSTSKKQIQGKNFLGKDLTKYNLCGADFRGALLIASNLSYSDLSGADFIGADLRDTNLSSSDLSRSIFLTQAQINSAKGDLKTKLPPMIVRPSYWI

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Crispr_ID: NZ_CP030776_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030776_2

565289-565379

Orphan

Consensus_repeat	Method
TTACTAAAATCACCGTTCGCAAGGGTAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030776_2

>merge|NZ_CP030776|2|565289-565379|CRISPRCasFinder
TTACTAAAATCACCGTTCGCAAGGGTAAAATACTTATAAACGTGATAACTTGGTTCACAAGTTACAAAAATCACCGTTCGCAAGGGTAAAA

>NZ_CP030776|2|2|565289-565379|CRISPRCasFinder
TTACTAAAATCACCGTTCGCAAGGGTAAAA	TACTTATAAACGTGATAACTTGGTTCACAAG
TTACAAAAATCACCGTTCGCAAGGGTAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030776.1\|WP_003430828.1\|569961_570936_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_CP030776.1\|WP_002581756.1\|565658_566771_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030776.1\|WP_003430862.1\|573688_574198_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP030776.1\|WP_043853805.1\|556012_556558_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP030776.1\|WP_002581758.1\|561223_562885_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP030776.1\|WP_002581763.1\|556613_557090_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207
NZ_CP030776.1\|WP_002581751.1\|572925_573618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030776.1\|WP_113886521.1\|576734_578645_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP030776.1\|WP_043853806.1\|560192_560963_-\|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl\|CDD\|274139
NZ_CP030776.1\|WP_003411363.1\|563171_564635_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030776.1\|WP_002581762.1\|557708_558023_-\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|179494
NZ_CP030776.1\|WP_043853808.1\|568845_569853_-\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|319265
NZ_CP030776.1\|WP_002581760.1\|559340_560183_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP030776.1\|WP_002581761.1\|558024_558771_-\|energy-coupling-factor-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181384
NZ_CP030776.1\|WP_002581749.1\|574526_575741_-\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_CP030776.1\|WP_057089035.1\|555088_555952_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223566
NZ_CP030776.1\|WP_002581752.1\|571770_572922_+\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669
NZ_CP030776.1\|WP_002581755.1\|567743_568697_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|334163
NZ_CP030776.1\|WP_003430867.1\|578765_579614_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP030776.1\|WP_043853927.1\|554543_554966_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99906

Protein	Function_ID	Function_description	E-value
NZ_CP030776.1\|WP_003430828.1\|569961_570936_-\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.37007e-48
NZ_CP030776.1\|WP_002581758.1\|561223_562885_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.29576e-40
NZ_CP030776.1\|WP_003430862.1\|573688_574198_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	7.70205e-06
NZ_CP030776.1\|WP_043853805.1\|556012_556558_-\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	7.17774e-78
NZ_CP030776.1\|WP_043853806.1\|560192_560963_-\|cobalt-ECF-transporter-T-component-CbiQ	gnl\|CDD\|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	1.80236e-34
NZ_CP030776.1\|WP_002581763.1\|556613_557090_-\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	5.12289e-96
NZ_CP030776.1\|WP_003430867.1\|578765_579614_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	5.04127e-11
NZ_CP030776.1\|WP_002581762.1\|557708_558023_-\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	gnl\|CDD\|179494	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein.	3.26606e-24
NZ_CP030776.1\|WP_113886521.1\|576734_578645_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP030776.1\|WP_043853808.1\|568845_569853_-\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|319265	cd16408, ParB_N_like, ParB N-terminal, parA -binding, -like domain of bacterial and plasmid parABS partitioning systems. This family represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	2.64931e-17
NZ_CP030776.1\|WP_002581760.1\|559340_560183_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	4.25826e-97
NZ_CP030776.1\|WP_002581761.1\|558024_558771_-\|energy-coupling-factor-ABC-transporter-permease	gnl\|CDD\|181384	PRK08319, PRK08319, energy-coupling factor ABC transporter permease.	6.40713e-110
NZ_CP030776.1\|WP_002581749.1\|574526_575741_-\|sodium/glutamate-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	5.38216e-124
NZ_CP030776.1\|WP_057089035.1\|555088_555952_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	1.08081e-64
NZ_CP030776.1\|WP_002581752.1\|571770_572922_+\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	3.66073e-26
NZ_CP030776.1\|WP_002581755.1\|567743_568697_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	2.94475e-14
NZ_CP030776.1\|WP_043853927.1\|554543_554966_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	2.31801e-16

>NZ_CP030776.1|WP_003411363.1|563171_564635_-|hypothetical-protein
MDKDDRLFKEDMIKLFKNVYEVLVKKEKFTDFYETLDNDLANLKDTGKREVIYKNLTNSIKRTKTRWLNKYVNGSNNSLSEDIEYAEHFYKRVLEGVYEPDKFVMIYGVNNIDEYKKKMFNELYTWRDNEDALLSSYKYIGTFQKRSITLAFRSDILKLYYDFLTNNAKSVITIPSVLSNFSIDTTNKKDYLKDDEKEFLDDNLSLEGTIDRLIVNKENQQKLLMKLEKQVYLRIEEGKDSLDIITQIALLKAIKQLNSLDTRIISHYYTHFYNIVADKSVDKYIGDLVSELGLSDSKKNTDAVIKSLLKIGSIRLESENYEGREIKGTLFEVSISERDGRKFAQVFLGGFLRTLIIMDSSFNFNKDVFDLLSNDAQQIAIWLQNRRLKMVLESEDFKDVIAIQRFTDAILMSTKSIYKKRDRIINALDELKQYKLIVKNYEYIKKNYEFVISYIELPESVIKKIKNKEFKTGELIEGQIHADYTVE
>NZ_CP030776.1|WP_002581758.1|561223_562885_-|HAMP-domain-containing-histidine-kinase
MKNIKNDLKVIGIIFLFCIMYSSIVREEFSILNILSIIDVLIIFCFVLYIISAVATYSLKLKYINNLYRYLSICFLSVGMLSFSYICFKKQIHINNGFENSCISIEILAAILESCYLIYCFSNYKNNINTKRFLAGTLLISICTIYICSALSILPLYEVDNLYIKSIILICFSICILLKIYLLRVIKKSGTDITESMALYLKMYMYLSIISIIIELNVYMNISSELIFIYYLIRALSSYCIVKIILVEILKTPQEYLYKNLVKKSEDLEATILELKKTIDDKNIIYKDYEKRTKHEEVKNEVLANISHEFKTPVNVIYSAVQTQDLIKNTANIEELLKYNKIIKQNCNRLTRLINNFIDTTRFEKENVKTEFTCENIVEITEYLTMCVVPFANSKKLNLIFDTSDEELYSLIDKELYDRMILNLLSNAIKYSRINGNIKVMIKDDNKFIKITIEDDGIGIDKYHLKDIFSIFERVDKSYSRNTEGSGLGLNIAKKIIDIHNGNISIESIKEKGTSVIVSIPKCSEKYVDNISHRLQDNTYVKYEVEVEMSDIY
>NZ_CP030776.1|WP_043853806.1|560192_560963_-|cobalt-ECF-transporter-T-component-CbiQ
MERKIDSYAYKSKLRKINPAFKVIFAFLTLLICIIADNIYVSLAIIVSMGFITIFKGGIKFHEYMSLMSIPVVFMILGSIAIAFGVSMSPIGDYNLHLCGFYLYTSDENIMKTMEIVMKAFGAISAMYMMTLSTNTSEIISVLRKAHIPKIIIELMNMIYRFIFILIDVQCKMKNSAQSRLGYIDFKTSCYSFGSTASKLLIVSLKKANTYYNAMESRCYNGDMLFLEEEKKVKTIHVVLACIYFSILIFIWYIAK
>NZ_CP030776.1|WP_002581760.1|559340_560183_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MDDKIKEIILQIKELCYSYMGEKNTLNNINLNIHRGEKIAVLGSNGAGKSTFFLNINGVLTPKSGKIIYKGKAITKKNLNELRKNIGIVFQDADNQIIASTVLAEVSFGPMNLKLPKDEVIKRVNEALDYMNISEFKERPPHYLSGGEKKRVSIADIIAMKSEVIIFDEPTAALDPLNAEMLEEVLKKLSLENKTLLISTHDVDFAYRWADRVVVFSKGGIIGDGTPLEIFKNEKILKNSNLKRPIMLDVYETLIEKRILTNDNLYPKNINEFKKIFNKY
>NZ_CP030776.1|WP_002581761.1|558024_558771_-|energy-coupling-factor-ABC-transporter-permease
MKNQNKIIKIAILLVLMFGITPAANAMHIMEGYLPAKYCIGWGIICLPFLIGGFLSIKKSLDKDRKSVTILAMAGAFIFVISSLKIPSVTGSCSHMTGTGLGAILFGPLAVSVLGIIVLIFQAILLAHGGITTLGANTFSMSIAGPLLSFGLYKLCVKLKINRKVSVFIAAALGDLFTYCITSFQLAMAYPSPEGGVFASAVKFLGVFAPTQLPLAIIEGILTVIVIIGLETYAKSELTGLGFLKEEK
>NZ_CP030776.1|WP_002581762.1|557708_558023_-|energy-coupling-factor-ABC-transporter-substrate-binding-protein
MTKNKKTVIILLIIALAIAIIPLFALKGAEFGGSDDAGSVMVEEINGEAYEPWFTPVMETWIDGELPGEVESLLFCVQTGIGVGIFAFFMGRFVERKKWENKKE
>NZ_CP030776.1|WP_002581763.1|556613_557090_-|glutathione-peroxidase
MEFYDLSATKMNGRKVSMEEYRGKVVLVVNTASKCGLTPQFTELEELYNEYKDNGFEVLGFPCNQFAKQDPGSNKEIGEFCLRNYGVSFTMFEKIDVNGQNTHPIYKFLKNEAGGLIGRDIKWNFTKFLIDSEGNVIKRYSPITKPSSIKKDIYSLIK
>NZ_CP030776.1|WP_043853805.1|556012_556558_-|glutathione-peroxidase
MNIYDYKYKEISGKEVLLEDYRNKAIVIVNIASKCGFTPQLEDLQKIYEKYKEHGFEIIGFPSNQFNEQSPGSNSDLNTFCKRNYGVTFNLSEKIDVRGSNSHPLFNYLTEKCPFKGFNKENITEKMLYSITEENYPEYLVGDSIKWNFTKFLVDKNGNVVKRYESHIEPLDMIKDIEELL
>NZ_CP030776.1|WP_057089035.1|555088_555952_-|NAD(P)/FAD-dependent-oxidoreductase
MERYDLAIIGSGPAGVSAALNAKIRKKNFIIFGSKELSNKLTKAEKINNYLGFYGKSGAQIRDEFIKHMESMDISITEEKINNIYAMGDYFTLMANDKMYEASAIILATGVNFGRPFKGEEELLGKGVGYCATCDAPLYKDKIVTIIAYNKHEEDEVNFISTIASKVYYIPMYKEKVEVDEKVQIINDIPVEIIGKERVEKLILKNSEIETDGIFILRDSVSPSQLVPGLELDENNVKVDRKMTTNLQGCFAAGDIVGAPYQYIKAAGEGNIAALSAVSYIDNLNKK
>NZ_CP030776.1|WP_043853927.1|554543_554966_-|PTS-sugar-transporter-subunit-IIB
MIKILICCLGGFSSSAMVKKVKSEIIENNLQKEMSVDFSPFMNANKLYHEYDVIMVCPHTRYEVNGFVKKHYDLNIPIYVLPPKMYGQMNAKELYIDAVDIIDGYNDSKTNPWHFKGEEEIMTVQRACSYRHFKKLSKLK
>NZ_CP030776.1|WP_002581756.1|565658_566771_+|hypothetical-protein
MSTKLSNEHITRISKDCNEYKILDVYIILAHISSEVKSGKYLIQSYSSKKSDLINIVHKYCPKAAYKTIHNCIEKLEFMNILIYDESLCAWCLKNMENMTKSKDEAETLEERETLTGYTNIRKFFLTDEFFNMKAREKRVIIYICQLLDSKASRNYKNISINLLKFNSSWLKILKTKCKYYAKNTIENMLEKYKDIFNDFSSLVREKDIAPKTVTSFKFTFTCESLNNRNSEEDMLELIKLKNPKEYSLVKDKVEFAQITLSKQKIMHIVRAISTIKEWFLKERVTQLIINKYIAIQIHHSRENIKSLPAYSAAVVKAVVNEYNDFKEKFNKHSSDSHINNYYDTYIENDSFSSTVTEDIQYALSMLKAV
>NZ_CP030776.1|WP_002581755.1|567743_568697_+|tyrosine-type-recombinase/integrase
MNITKKQFEEFPKVDYIFGEYMYKYKMHMDKEYRCFSKDDTFIDVKKIKAWQHSYKINYYNIMLFDKYLYMQYKDTDFSIRDIREIHIQEFLDFSYNVMKNKPITINQKLVSLRMIMKYICKYYNVLPYNIALMVPKLKIDSVKPTSISYSDIKKILSILREKNYGIRDVCICKIIMTTGMKITSVFNMKVNDVDLNNRLLKYDNLGKEFFYPIQDTLYNDLCSYMDFRSSINPKCNNLFVNSSGKPKNIRSFQIAFRNAVIKADLDEAYTAQNLRASFLYEMGRILNDENELSELTDQKIVKQYIALKENHFNDII
>NZ_CP030776.1|WP_043853808.1|568845_569853_-|ParB-N-terminal-domain-containing-protein
MVKKNNNSTFNLRTNRNTEKKSSGIASSFFSSNTNETHVDNDISHTSDAPNYTDSIVNHLVNASSGLDSVLVNIDDLYSAPDDWNFYDRLPAGKMQELIESIISIGLQEPVIVWKKDDSGKYMILSGHNRVHAYKILCENQDSEKYSKIHAVIKDKNLSEEEAKEIIVDTNWVQRQLTTIQKARSINFKYRKLKKDSLEKKLKFDINSVIADEYQITSRQLISYKSLGNLTETAQNAVDNAKLSIKAGVAISKLIPEDQDYIINNFDISILNKNYSKIKSACDSESGVVNKSKLSSLLTEEELGSITIKVPIEYKDSLIAEIEALKKKYNIKKIN
>NZ_CP030776.1|WP_003430828.1|569961_570936_-|AAA-family-ATPase
MKGKLYYKLIKDKRNELDITQKQICDELNIQLEEYKKMESGDFIPKKSSLNKICTYLKLDINEIYMENFRDTKVISVMSNKGGVGKTSVTSSVSFCLAELGYKVLCIDADMQGNLTHSFNLETDEEKNLAIALKNELDLKDCIINSQYENLDFVVYNTALSAIDMLMFTKNAREYILKRILTNTINEGLYDFVVIDTNPSLSILNFNVINVTNYCIVPVQLGAFGLEGVGILLNFIDDAKQFNPNFIDYKLVINNYDSRKSITKKSQEWLEENYGDILLESIIRVDTNIENAQVGSMPVLAYNSNCRISNEFRLLTKEILKIIK
>NZ_CP030776.1|WP_002581752.1|571770_572922_+|ParM/StbA-family-protein
MKKELYIAVDPGFDTVKVIANGQFFKFPFNTEKTDEKRISNMTVADDFILYRNKDNETWRIGQYARELIFEKKDSSDIEDKMKSFYSEKRFVSDEFTIGLRTAIAMAVLRLNLYKHLKDIKIYIMVALPHSVRDNYSTQVKSILCGSHDYFVKIGKEEEEEYTFVIEEDNIFTVSQTVASILGETSDDEGNIDEDKFYYLSDGPTLVIDGGFYTIGEVAVDRGGSINEEKTFSDINHAMKNINMEIAKELENQRPDIKYYVIEYLMTKNEGKLKYLKNGKAQIIDLNVLKKEKIKEMSSRFIESLNAKYNNLLDFNYVLVTGGTGARYYEHLKEYYVGKGIVEEDRLILTNNILNGKRFDIEYAIAAGAYKGLKGKVAVLVEQ
>NZ_CP030776.1|WP_002581751.1|572925_573618_+|hypothetical-protein
MKSERIGLRFSKKDEDIISWFLMLRENKIEQSFAVKALLKAFFLQETINGGSIKIRHNVKMEPTSIAINEIDLNDDIIKMKTKGIKLASFTKDIIRLYINISDIDKAPQISELQQIHTKYKLKYLNNIVYEQSQEIKVNIESLPEFKKNIINNIKNENNMIAEESNSNDKDINSNYENLVKEKSNMDMNFQSSSKITFFDEESKNLQEVSKSEKDKKVKSKKRNPLLAQI
>NZ_CP030776.1|WP_003430862.1|573688_574198_+|helix-turn-helix-transcriptional-regulator
MNYKYMNELKKFDNIDEFEKMDFVLLSNDVISNTIDNNLQKLLFAKRITISELSRKTGVSKQVISSSIVKNTKIDLDSAIKISRVLKTPIEDIFMLKKNSWVDVYIVNGKTVYLNMKTLTMVSSEEKNMYIKTHKVKYYNPIDDCLSYKKLNENYNELFIKVGKRIEQL
>NZ_CP030776.1|WP_002581749.1|574526_575741_-|sodium/glutamate-symporter
MELNFNIYETMALVSIVLYIGKYIRNKFSILSQYCIPPSVIGGFTFALLILIFKLTNICVINLDTLLQNIFMTAFFTSIGFTASIKVLKQGGIKVITFLCLAILLVILQNIVGVTLASIFKLTPLLGLCTGSIPMIGGHGTAGSFGPILENLGITGATTVSVASATFGLIMGSIIGGLVAKALIHNYKLKTIRDEYSEKPPSEVGDYNEENHNILSFKKLTNGACLLFIAMGIGSVVSDFIQKTGLTFPSYIGAMIVAAIIRNIYDFTDKEIVEKEIETLGGLSLSFFLTMALMGLKLWQLFDLALPLMIMLFAQVILVGLFAYFITYKVMGKNYEAAVFASATCGFGMGATPNAIANMDELTNRYGFVHTPYFVVPIVGCLFIDFVNSGIITIFINFISYNIY
>NZ_CP030776.1|WP_113886521.1|576734_578645_+|threonine--tRNA-ligase
MLINIKLKDGSIKEIEDNSTVFDLAQSISRNLGKSALVGEVNGCLVDLNYKLKNNDEVNILSYDSEKAVEVIRHSSAHIMAQAVKRLYKNAKLAIGPSIANGFYYDFDIDTPIIKEDLEKIEKEMNKIVKENLKFERIDVSKEEALKIMKDNDEIYKVELINDLPEGEKISLYKQGDYIDLCRGPHIPSTKYAKAFKLISVAGAYWRGNEKNKMLQRVYGIAFSNLKELEIHLHNLEEAKKRDHRKLGKELKLFTFAEEGPGFPFFLPKGVILKNSLIDFWRKIHYEAGYVEVETPIMLNKKLWETSGHWYHYKENMYTSMIDDEEFALKPMNCPGGMIVYKSDSHSYRDFPMRVGELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKSEIKGVVELIDKVYSIFGFKYHVELSTRPEDSMGSDEEWQMAEDSLRGALDELNLQYVINEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQLPQRFELEYVGSDNEKHRPIVIHRVIFGSIERFIGILIEHFAGKFPTWLAPVQVKVLPISDKFNNYCDEVVKQFYENGIRIEIDHRNEKIGYKIREARNERVPYIVIIGEKEEEEGNVSLRSRKNGDEGSINVIDLIERINNEIKNKYI
>NZ_CP030776.1|WP_003430867.1|578765_579614_-|pentapeptide-repeat-containing-protein
MKYTIDELYSKELKCHCENCFGLCCTALFFSACDGFPQNKDAGKPCINLKQDFTCSIHNTLFKKRLKGCISYECFGAGQKIAQKTFNKISWRKDPQSASKMFDTFLIIRQIHEMLWYLVQSYTLEKNNKIKSKIESLIDDTIKVSLWDVDKLLNLDLESYRDKVNVYLKTTSETIRKKFKVYSTNSLSTSKKQIQGKNFLGKDLTKYNLCGADFRGALLIASNLSYSDLSGADFIGADLRDTNLSSSDLSRSIFLTQAQINSAKGDLKTKLPPMIVRPSYWI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP030776_1	1.1\|565125\|51\|NZ_CP030776\|CRISPRCasFinder	565125-565175	51	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	379362-379412	0	1.0
NZ_CP030776_1	1.1\|565125\|51\|NZ_CP030776\|CRISPRCasFinder	565125-565175	51	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	493938-493988	0	1.0
NZ_CP030776_1	1.1\|565125\|51\|NZ_CP030776\|CRISPRCasFinder	565125-565175	51	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	296581-296631	0	1.0
NZ_CP030776_1	1.1\|565125\|51\|NZ_CP030776\|CRISPRCasFinder	565125-565175	51	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	882019-882069	0	1.0
NZ_CP030776_1	1.1\|565125\|51\|NZ_CP030776\|CRISPRCasFinder	565125-565175	51	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	882034-882084	0	1.0
NZ_CP030776_1	1.1\|565125\|51\|NZ_CP030776\|CRISPRCasFinder	565125-565175	51	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	331611-331661	0	1.0
NZ_CP030776_2	2.1\|565319\|31\|NZ_CP030776\|CRISPRCasFinder	565319-565349	31	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	379188-379218	0	1.0
NZ_CP030776_2	2.1\|565319\|31\|NZ_CP030776\|CRISPRCasFinder	565319-565349	31	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	296775-296805	0	1.0
NZ_CP030776_2	2.1\|565319\|31\|NZ_CP030776\|CRISPRCasFinder	565319-565349	31	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	882213-882243	0	1.0
NZ_CP030776_2	2.1\|565319\|31\|NZ_CP030776\|CRISPRCasFinder	565319-565349	31	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	882228-882258	0	1.0
NZ_CP030776_2	2.1\|565319\|31\|NZ_CP030776\|CRISPRCasFinder	565319-565349	31	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	331805-331835	0	1.0
NZ_CP030776_2	2.1\|565319\|31\|NZ_CP030776\|CRISPRCasFinder	565319-565349	31	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	493764-493794	1	0.968

1. spacer 1.1|565125|51|NZ_CP030776|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	CRISPR spacer
aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	Protospacer
***************************************************

2. spacer 1.1|565125|51|NZ_CP030776|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 0, identity: 1.0

aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	CRISPR spacer
aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	Protospacer
***************************************************

3. spacer 1.1|565125|51|NZ_CP030776|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 0, identity: 1.0

aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	CRISPR spacer
aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	Protospacer
***************************************************

4. spacer 1.1|565125|51|NZ_CP030776|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	CRISPR spacer
aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	Protospacer
***************************************************

5. spacer 1.1|565125|51|NZ_CP030776|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	CRISPR spacer
aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	Protospacer
***************************************************

6. spacer 1.1|565125|51|NZ_CP030776|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 0, identity: 1.0

aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	CRISPR spacer
aacaaaattcaactcctttttactattatttttattaaaaattgcgtttcg	Protospacer
***************************************************

7. spacer 2.1|565319|31|NZ_CP030776|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 0, identity: 1.0

tacttataaacgtgataacttggttcacaag	CRISPR spacer
tacttataaacgtgataacttggttcacaag	Protospacer
*******************************

8. spacer 2.1|565319|31|NZ_CP030776|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 0, identity: 1.0

tacttataaacgtgataacttggttcacaag	CRISPR spacer
tacttataaacgtgataacttggttcacaag	Protospacer
*******************************

9. spacer 2.1|565319|31|NZ_CP030776|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 0, identity: 1.0

tacttataaacgtgataacttggttcacaag	CRISPR spacer
tacttataaacgtgataacttggttcacaag	Protospacer
*******************************

10. spacer 2.1|565319|31|NZ_CP030776|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 0, identity: 1.0

tacttataaacgtgataacttggttcacaag	CRISPR spacer
tacttataaacgtgataacttggttcacaag	Protospacer
*******************************

11. spacer 2.1|565319|31|NZ_CP030776|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 0, identity: 1.0

tacttataaacgtgataacttggttcacaag	CRISPR spacer
tacttataaacgtgataacttggttcacaag	Protospacer
*******************************

12. spacer 2.1|565319|31|NZ_CP030776|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 1, identity: 0.968

tacttataaacgtgataacttggttcacaag	CRISPR spacer
tacttataaacgtgataacttcgttcacaag	Protospacer
********************* *********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

354281 : 363366

Bacillus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_174255851.1\|354281_355952_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.5e-14	25.0
WP_113886508.1\|356387_357119_-	LytTR family transcriptional regulator DNA-binding domain-containing protein	A0A2R2ZGH8	Clostridioides_phage	2.9e-15	30.0
WP_174255852.1\|357180_358998_-	GHKL domain-containing protein	X5JAC0	Clostridium_phage	1.3e-27	28.3
WP_113886510.1\|359515_361117_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.8e-18	24.1
WP_113886511.1\|361100_361805_-	response regulator	W8CYM9	Bacillus_phage	1.9e-35	34.6
WP_113886512.1\|361809_363366_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.0e-17	34.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP030775

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP030775_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030775_1

24126-24269

Unclear

Consensus_repeat	Method
GTGTATTAATAACAATAATGTTTACCAA	CRISPRCasFinder

2 spacers

cas3

The CRISPR arrays of NZ_CP030775_1

>merge|NZ_CP030775|1|24126-24269|CRISPRCasFinder
GTGTATTAATAACAATAATGTTTACCAAGCATAGGTGAGCGAAATATTTCGTAGTCTTCATAAAAGTGTATTAATAACAATAATGTGTACCAACTAACTTAAAATTGCACGTTATTGTATATTAAGAACAATATATTATATCGA

>NZ_CP030775|1|1|24126-24269|CRISPRCasFinder
GTGTATTAATAACAATAATGTTTACCAA	GCATAGGTGAGCGAAATATTTCGTAGTCTTCATAAAA
GTGTATTAATAACAATAATGTGTACCAA	CTAACTTAAAATTGCACGTTATT
GTATATTAAGAACAATATATTATATCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030775.1\|WP_113885955.1\|26724_27066_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_002582891.1\|13070_13739_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107221
NZ_CP030775.1\|WP_002582910.1\|29718_29862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113885953.1\|25982_26276_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP030775.1\|WP_113885957.1\|28819_29131_+\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|368753
NZ_CP030775.1\|WP_113885949.1\|17209_19669_+\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319795
NZ_CP030775.1\|WP_113885952.1\|25580_25787_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224393
NZ_CP030775.1\|WP_113885950.1\|22623_23790_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP030775.1\|WP_002582892.1\|13996_15571_-\|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|223587
NZ_CP030775.1\|WP_035763428.1\|16014_16749_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP030775.1\|WP_002582888.1\|10220_10850_+\|HDIG-domain-containing-protein	unknown	unknown	gnl\|CDD\|131739
NZ_CP030775.1\|WP_002582896.1\|22096_22249_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379193
NZ_CP030775.1\|WP_113885951.1\|24664_25417_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP030775.1\|WP_113885956.1\|27082_28426_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|238542
NZ_CP030775.1\|WP_103673883.1\|19882_21913_+\|M13-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341056
NZ_CP030775.1\|WP_174255814.1\|29565_29706_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113885954.1\|26380_26758_+\|DNA-replication-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_035763427.1\|12051_12798_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|236080
NZ_CP030775.1\|WP_002582889.1\|11250_12033_+\|flagellar-motor-stator-protein-MotA	unknown	unknown	gnl\|CDD\|181238
NZ_CP030775.1\|WP_002582908.1\|29332_29566_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP030775.1\|WP_002582891.1\|13070_13739_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107221	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.	8.19723e-10
NZ_CP030775.1\|WP_113885953.1\|25982_26276_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	2.48639e-08
NZ_CP030775.1\|WP_113885957.1\|28819_29131_+\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	4.09468e-07
NZ_CP030775.1\|WP_113885949.1\|17209_19669_+\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
NZ_CP030775.1\|WP_113885952.1\|25580_25787_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	2.05294e-09
NZ_CP030775.1\|WP_113885950.1\|22623_23790_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.54333e-40
NZ_CP030775.1\|WP_002582892.1\|13996_15571_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.67421e-163
NZ_CP030775.1\|WP_035763428.1\|16014_16749_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.35807e-62
NZ_CP030775.1\|WP_002582888.1\|10220_10850_+\|HDIG-domain-containing-protein	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	5.53844e-08
NZ_CP030775.1\|WP_002582896.1\|22096_22249_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379193	pfam13451, zf-trcl, Probable zinc-ribbon domain. This is a probable zinc-binding domain with two CxxC sequence motifs, found in various families of bacteria.	6.62776e-21
NZ_CP030775.1\|WP_113885951.1\|24664_25417_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	9.01563e-15
NZ_CP030775.1\|WP_113885956.1\|27082_28426_+\|AAA-family-ATPase	gnl\|CDD\|238542	cd01122, GP4d_helicase, GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.	6.81189e-16
NZ_CP030775.1\|WP_103673883.1\|19882_21913_+\|M13-family-metallopeptidase	gnl\|CDD\|341056	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I. The M13 family of metallopeptidases includes neprilysin (neutral endopeptidase, NEP, enkephalinase, CD10, CALLA, EC 3.4.24.11), endothelin-converting enzyme I (ECE-1, EC 3.4.24.71), erythrocyte surface antigen KELL (ECE-3), phosphate-regulating gene on the X chromosome (PHEX), soluble secreted endopeptidase (SEP), and damage-induced neuronal endopeptidase (DINE)/X-converting enzyme (XCE). Proteins in this family fulfill a broad range of physiological roles due to the greater variation in the active site's S2' subsite allowing substrate specificity. NEP is expressed in a variety of tissues including kidney and brain, and is involved in many physiological and pathological processes, including blood pressure and inflammatory response. It degrades a wide array of substrates such as substance P, enkephalins, cholecystokinin, neurotensin and somatostatin. It is an important enzyme in the regulation of amyloid-beta (Abeta) protein that forms amyloid plaques that are associated with Alzeimers disease (AD). ECE-1 catalyzes the final rate-limiting step in the biosynthesis of endothelins via post-translational conversion of the biologically inactive big endothelins. Like NEP, it also hydrolyzes bradykinin, substance P, neurotensin, and Abeta. Endothelin-1 overproduction has been implicated in various diseases including stroke, asthma, hypertension, and cardiac and renal failure. Kell is a homolog of NEP and constitutes a major antigen on human erythrocytes; it preferentially cleaves big endothelin-3 to produce bioactive endothelin-3, but is also known to cleave substance P and neurokinin A. PHEX forms a complex interaction with fibroblast growth factor 23 (FGF23) and matrix extracellular phosphoglycoprotein, causing bone mineralization. A loss-of-function mutation in PHEX disrupts this interaction leading to hypophosphatemic rickets; X-linked hypophosphatemic (XLH) rickets is the most common form of metabolic rickets. ECEL1 is a brain metalloprotease which plays a critical role in the nervous regulation of the respiratory system, while DINE is abundantly expressed in the hypothalamus and its expression responds to nerve injury. A majority of these M13 proteases are prime therapeutic targets for selective inhibition.	0
NZ_CP030775.1\|WP_035763427.1\|12051_12798_+\|OmpA-family-protein	gnl\|CDD\|236080	PRK07734, motB, flagellar motor protein MotB; Reviewed.	8.14334e-76
NZ_CP030775.1\|WP_002582889.1\|11250_12033_+\|flagellar-motor-stator-protein-MotA	gnl\|CDD\|181238	PRK08124, PRK08124, flagellar motor protein MotA; Validated.	1.87979e-136

>NZ_CP030775.1|WP_113885950.1|22623_23790_-|tyrosine-type-recombinase/integrase
MATYKNISTVQSKPNWKATVCLGYNDNGKKNIARKQGFKTKKEAEKWAADIVNKKNKGFIAPTESNTIFKDYINKWFNEYKSKHISINTRINYKSRIDTHIIPKLGSYKLNKITNAIIQDFYNSLINEGMKPSSVKKIMETINGVFKYAQKSKLIYSLPTDIERQPMNKPKVEYWIQEEIDFYLDQIKDQYLYTPILIEIFTGLRVGELCGLRWCDIDFENRYLIVNNQVIYDREMKILVFSKILKTDTSHRKITLPKILLDHLASIRNDATDTDFVVLNRDGGICNPRNLSMNFTKSISKYRRSLSELQENNKKIPNNYMQIKQITFHALRHTHATLLIFNGENIKVISERLGHKNISTTLDTYTHVMEDMKNNTADLLDSIFRYRH
>NZ_CP030775.1|WP_002582896.1|22096_22249_+|zinc-ribbon-domain-containing-protein
MTDKTIVCRDCGNEFIFTVGEQEFYKEKGFENEPVRCADCRRAKKEQNRR
>NZ_CP030775.1|WP_103673883.1|19882_21913_+|M13-family-metallopeptidase
MIKKRKFIAFTVACAMLFSQSIYAKAAEVDNNNQTNKTVNNDVREQDDFYDAVNKDWLNTAKIADGKTSNSAFDSVNNSLTEQKKNLMSELIANKKMYGENSDEKKIINLYENYLNKDERNKQGIEPAREILERIKNIKSLDELNDLNKYNISNPLIGFACSVDLKDATKYALYVEQTGLSLGDSDEYTKPTESTAHTKELITNYYIKLLTLTGYTADEAKQKVENMFKLEYMIAPSIIGKEESTKNENAIDESYNVVSIDQLDNLAPNLNIKKYMENLKVDTANKIILGEEKWIKALNDIYKEENLQLFKDYIEINNIAGMAAVLSEDFTKASTEFANEYMGSKGDIPDDEKAISVVNSLLSEPFGRLYINRYFNPQIKTNVENMTSKIIETYKKRIEKLDWMSDKTKANAIEKLNNLNVNIGYPEKWEDYSSVEIKSYDEGGSLLQNALNISKFLYEKQLEKLNSTVDRNEFACPPQMVNAFYNPTSNGITVPAGILQDEFYDINASEERNYGAIGAVIGHEISHAFDNTGAKFDSNGNLNCWWTDEDLSKFQEKTQKVRDYYNKVKTDNGKNVNGDATVGENIADIGGIACVLDILKEKENPNYKDFFESNARIWREIATPEYEDMALKFDVHSPNKIRVNVVLPQFDQFYTTYGVTEKDKMYIKPEDRLQIW
>NZ_CP030775.1|WP_113885949.1|17209_19669_+|HAD-IC-family-P-type-ATPase
MEFKNLVCNGEAEHMKSKDIKNKIVSDKKINESDEEKKLTGLNDEQVNIRIKEGKVNYVPKAPARTFGQILRANLFTSFNAINVVLAVIIILAGSPKNAIFVGVILVNTLIGVAQELRAKDILEKLSVISMAQAKVLRNGEINEIPIDNIVLDDVLYLETGMQVLADAEVIENNGLEVDESMLTGESDAIGKREGDALLSGSFIVAGECYARVNKVGKETYSSSLAEEAKQFKITNSELQSAINKIFKVLLWIIIPLTILLTVTQLRVPDATWQSAAIGTVSGIIGMIPEGLVLLTSATFIVSIIKLSKFDTLVQELCATEVLARVDVLCLDKTGTLTQGDLKLSEIKVIGDTDKLEVDRALAALVHNLPSKNPTQKAILDKYKEYDQNLKCIDKIPFSSKRKWGGLTFEGDLGSWILGAPEVILGKEYVFIKNIVEEEAKKGKRVLLLAKFHGEELSDSLLGKIESIALLLIEDIIREAAPDVLDYFNKQGVEVKIISGDSPVTVSEVARRAGVQSWNKYVDARELPEDDNEFKNLVKDTTVFGRVTPHQKKKIVTALQEMDHTVAMTGDGVNDVLALKASDCGIAMANGSDATKAVAQLVLMKSDFSALPKVLEEGRKQINNLERVSELFLSKTIYSILLAFVCSVMFLPYPILPIQLSLVGSCAIGIPAFFLAMLPSTGGVKKGFLTRVITVSIPNGIILAGFTVGTFLISLALGVGMQQSRTLALLMFAGISMVILFRVAKPLTNFKAVLCLSMFGIMILAFITPIGRYIFSLTTIKLRYWAISLAVIVLSGPLITRFVDFFRIRVNKKYKVRTI
>NZ_CP030775.1|WP_035763428.1|16014_16749_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MCNIVMRSFIFYPGIILALIITNLYRIKINILTKKGDSKKREAYIHKVTTQWAKFVMKLSGAKITVIGEENIPKDQTVLFIANHQSNFDIPLIMSSIDVPKGFIAKKELEKWPMISTWMKYINCIFMDRSNLRKSAEAIVEGAKLLKNGYSMVIFPEGTRSKGGPVEDFKAGSFKLATKSKCPIVPVTIDGTYKLLEANKNWIKADNVRLIIHPPIDVTSLSKEESENLHNTVRSIISKDCTTI
>NZ_CP030775.1|WP_002582892.1|13996_15571_-|DEAD/DEAH-box-helicase
MSDNQFATLGLKESIVRAISDLGFTKPSQIQEQSIPVTLSGADLIGQAQTGTGKTAAYSLPILTKMSTNKGIKALILAPTRELAVQVKDEMNRLSKYEKAEILAVYGGDSIDRQIRALRKGVDVVVGTPGRMLDLIKRKCLHLDSVEFLVLDEADEMLNMGFIDDIESILSHTPEERQTLLFSATMPDPIAKLAKRYMKPDAKLVSVKKSSLTVSKIEQSYFMINNKHRLEALCRLLDLDNPSSAIIFCRTKRGVDELVQELQSKGYMVEGMHGDMTQAHRLTTLSKFKEGTLNLLIATDVAARGIDVDGVTHVFNYDLPQDVESYVHRIGRTGRANREGTAYSLVTPKDFSMLKQIQKVTKSAITQKPVPTAEEIKNKKFNDIIKEVTETITSGDLTKFMPNAIELVENNDPLSVVAALMKIKYDNESVFDYSSDKLEAPKKEDIRLFFSVGKRDGLTPKVLINYIKDRTRVNASTIGQIDLMENFSFVSVDETVSKKILDKCPGGKINKKKVNVEVANRRKK
>NZ_CP030775.1|WP_002582891.1|13070_13739_+|Hsp20/alpha-crystallin-family-protein
MFGMFPFGMGNMISFTSFTSFTSTKDGINGFNVTNGYSGFFDPNQANNFNQNMNNMNGMNLLDHIQSAVTSVLNNVDIEKLAEEYYTAISDTIKENSIEDDCDFIDFERNDDMYILRIDLNGIDLRELSIRYDPGILDINLKRSEYDNNSYRGYTNNIVKKKYNTSFDNIEEIDTDRVLKSIDNGIFTMRMPKKYALDSASKIIEVENYTVDNENDKVIKKM
>NZ_CP030775.1|WP_035763427.1|12051_12798_+|OmpA-family-protein
MSRKKQHHEEHVDEAWLLPYSDMLTLLLALFIVMFAMGQTDKAKFQAMSKSFNQIFSGGTSMMQSDGNSIIPMDTISDGTGKSDAELEQDKMVAIKAVMEEEITSEGYSDAINVDINEEGLYITVQDVALFDSGKADIHQNVIPLLSKVSAMLNGLENEIKIVGHTDNVPIDNSEFHSNMDLSAERAINVRSLLVKSENGLDPEKTSIEAWGELKPKASNDTEQGRAQNRRVEIVVSREYKEADTASK
>NZ_CP030775.1|WP_002582889.1|11250_12033_+|flagellar-motor-stator-protein-MotA
MDIFLVIGLIGGSAVVLSGLLMKGASPSILFSGEAIMVIIVGSIIGILNSFPKNEVTKIPKILGVLFSNKGRQDPVEIIEQLIEMSQRTRRDGLLSLEGTIQGLDNRFMKKGLEMVVDGMESDIIKEVLEIEIESMEERHRLGATVFSTAGGTAPTLGVLGAVIGLIGALGNLNDIDKLGESISSAFVATVYGIFCGYLIFHPFSNRLKRKSLEEIKNMNIILEGVLAIQAGNNPKSIERKLVGMLEPKDRIKLEKNSNN
>NZ_CP030775.1|WP_002582888.1|10220_10850_+|HDIG-domain-containing-protein
MKDKDYEIFLEIENHLLNDDKPSLFLKKLADEKLLNNYPFSMIGDLQDVEQNPKYHPEGNVFIHTMMVIDEGAINREKSNDKRAFMWSLLLHDVGKKPTTKMRRGRLTSYDHDRVGKDMAEKFLEYFNQDNNFVDKVIGLVRWHMQSLFVTKDSKFQNIDEMLKDVDVNEIVLVALADRLGRGNLDNFAREETINEINSFEEKLIKYKK
>NZ_CP030775.1|WP_113885951.1|24664_25417_-|helix-turn-helix-domain-containing-protein
MNVGDNIKKYRIFRDFTRRDLANELQVSESTISRYENNKREPNINTLNKIAKILGIPATFLMDDETLNHNLVQRTTDMYLDKIQENTDKNFPTLAPIIELLTNPKIEMVYNFTYTDLAQNGYEELMFIAIEKAIKDTLQLIKNHENNGDIFDGAGAWISKESPLYEILKKNQNNNQTEYALAAHDGNLDDETKKKNLEKVEGMFKEDKKELTYDDFDTVAAHNDNLTDAEIWEADRRILEDINKKNNPST
>NZ_CP030775.1|WP_113885952.1|25580_25787_+|helix-turn-helix-domain-containing-protein
MKYTLKGLRVGQGFKAGEFAKDLGISREYLRLLENGKAKNPSVELMKKIAKKLNSDVVTLFFSDEEEN
>NZ_CP030775.1|WP_113885953.1|25982_26276_+|helix-turn-helix-domain-containing-protein
MSKALIYKVNEVAEMIGKPASSIRNEIRSGRLKATKSGVEYLIDKKEVDRYLGIETSDESLKKDLEIEKLKGQVKTLQTKIEAFKSVANSLNNIIGM
>NZ_CP030775.1|WP_113885954.1|26380_26758_+|DNA-replication-protein
MAKRRMFSLDVVDTDKFLELPVSSQNLYFHLGMRADDDGFISSPKKIASMVNCSADDLKLLIAKNYLIPFESGVVVVTDWKVNNWVRPDRKQETRFRDESSMLKVKNDVYQLVLECQPKVIPRLG
>NZ_CP030775.1|WP_113885955.1|26724_27066_+|hypothetical-protein
MSTKSHTEVRLGKYSIKKKEKDTSLDKIINSYTQDEELINTIRDFLKMRKAIKKPMTDRALKIMLNKLDKYADTPQKKIKILENSIENSWQGVFPLKDNCTLQHEQKKITDMF
>NZ_CP030775.1|WP_113885956.1|27082_28426_+|AAA-family-ATPase
MERFNLDVEIQIIGNCINSTETFLKVMDKGIEAEDFYNTNNQKLFTAITQCYIAKNTTDVLTFNGFLKANGVTITDTTSILSGTIIFTDITPYLNELLELRVVRERLRFAKEIQEGILKTDEDIKKRLASIDFIKSKVGNDNTITTLNKVKIVDVYTLEKIPTGFESIDERILGFAMGSLVIVTGYNGNGKSTLINEMCIAESMSRGYKVFAYSPELTNSNLKSWLYPTIANDDHFISKSYKGQNYKTLGKMGIRYIDDWISDKLLIYTDDSITSDEKRLLRDMNNLAQQGVKVFIIDNLMKIDLVDSFKNEYMAQKVFVNKLKDFARKYNVIVHLVAHPKKPQAGNTKITKFDVAGSGDITNLADYVVSISRITDEDRGKSPDLIDKDAVIKIMKDRIKGSSELYSTFKFDAERKRFYSNQNELNRDYGYINNEELVQVEINSNEL
>NZ_CP030775.1|WP_113885957.1|28819_29131_+|ImmA/IrrE-family-metallo-endopeptidase
MKLDKLKRFAQMQGFKVYMLDLGTKKECGYLLNNHIFINNCASEDRILYTLAHELAHGYLHKDKGNTVDSPKHAEYEEEADRAAHMILDLLSVDINTCIGGAN
>NZ_CP030775.1|WP_002582908.1|29332_29566_+|hypothetical-protein
MRNEADFILQNIHEMTKDINEDDNFQSTKDKVYRCEAIRTIFLGLHKDQQDRALKFLLSLLVQQKTESKLKIVGGTN
>NZ_CP030775.1|WP_174255814.1|29565_29706_+|hypothetical-protein
MELSAHIRNRMINVLNKIDKLSREAQEIVNLEIELSKKLDKLHTKK
>NZ_CP030775.1|WP_002582910.1|29718_29862_+|hypothetical-protein
MVKVIIKYNDESEKIKVLNALSAGAKILNISKPYKQGKYYRIYVDVE

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Crispr_ID: NZ_CP030775_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030775_2

404865-405083

Orphan

Consensus_repeat	Method
ATCAGGGGCAATGAAAACTGGATGGAT	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP030775_2

>merge|NZ_CP030775|2|404865-405083|CRISPRCasFinder
AACAGGATATATGAGTACTGGATGGATAAATGATAATGGAACTTGGTATTATGCAGCACAATCAGGAGCAATGCAAACAGGTTGGGTTATAGATTATTCAGCAGGTTATGGACAATGGTATTTTACTGATCAATCAGGGGCAATGAAAACTGGATGGATGCAAGATGCTGGAAAATGGTACTTCTTACAACCATCAGGAGCAATGAAAACTGGATGGAT

>NZ_CP030775|2|2|404865-405083|CRISPRCasFinder
AACAGGATATATGAGTACTGGATGGAT	AAATGATAATGGAACTTGGTATTATGCAGCACA
ATCAGGAGCAATGCAAACAGGTTGGGT	TATAGATTATTCAGCAGGTTATGGACAATGGTATTTTACTGATCA
ATCAGGGGCAATGAAAACTGGATGGAT	GCAAGATGCTGGAAAATGGTACTTCTTACAACC
ATCAGGAGCAATGAAAACTGGATGGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030775.1\|WP_113886033.1\|396208_398215_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP030775.1\|WP_174255820.1\|391524_392517_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113886043.1\|414052_416290_+\|cadherin-like-beta-sandwich-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886031.1\|393606_395055_+\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP030775.1\|WP_113886035.1\|401188_402199_-\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886039.1\|406329_408111_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886046.1\|420639_423645_+\|Ig-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886037.1\|403263_404673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_002582347.1\|425950_427546_+\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP030775.1\|WP_113886044.1\|416766_417759_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|226202
NZ_CP030775.1\|WP_113886040.1\|408548_410066_+\|cadherin-like-beta-sandwich-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886042.1\|412554_413532_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380481
NZ_CP030775.1\|WP_002582348.1\|423856_424906_+\|InlB-B-repeat-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886036.1\|402565_403240_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113886030.1\|392506_393607_+\|UDP-galactopyranose-mutase	unknown	unknown	gnl\|CDD\|223636
NZ_CP030775.1\|WP_113886045.1\|418349_419993_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_035761370.1\|398444_398951_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|227939
NZ_CP030775.1\|WP_113886034.1\|398947_400951_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP030775.1\|WP_113886032.1\|395112_396096_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_CP030775.1\|WP_113886041.1\|410533_412540_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910

Protein	Function_ID	Function_description	E-value
NZ_CP030775.1\|WP_113886033.1\|396208_398215_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.40649e-47
NZ_CP030775.1\|WP_113886046.1\|420639_423645_+\|Ig-like-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	6.82467e-25
NZ_CP030775.1\|WP_113886043.1\|414052_416290_+\|cadherin-like-beta-sandwich-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	5.69542e-35
NZ_CP030775.1\|WP_113886040.1\|408548_410066_+\|cadherin-like-beta-sandwich-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	7.41107e-39
NZ_CP030775.1\|WP_113886035.1\|401188_402199_-\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	2.4603e-36
NZ_CP030775.1\|WP_113886039.1\|406329_408111_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.08057e-34
NZ_CP030775.1\|WP_035761370.1\|398444_398951_+\|VanZ-family-protein	gnl\|CDD\|227939	COG5652, COG5652, Predicted integral membrane protein [Function unknown].	2.4523e-13
NZ_CP030775.1\|WP_002582347.1\|425950_427546_+\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP030775.1\|WP_002582348.1\|423856_424906_+\|InlB-B-repeat-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.57954e-16
NZ_CP030775.1\|WP_113886042.1\|412554_413532_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|380481	cd01539, PBP1_GGBP, periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. GGBP is a member of the pentose/hexose sugar-binding protein family of the type 1 periplasmic binding protein superfamily which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic GGBP is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.	1.85938e-60
NZ_CP030775.1\|WP_113886030.1\|392506_393607_+\|UDP-galactopyranose-mutase	gnl\|CDD\|223636	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane].	0
NZ_CP030775.1\|WP_113886044.1\|416766_417759_+\|IS1-family-transposase	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.82679e-09
NZ_CP030775.1\|WP_113886031.1\|393606_395055_+\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	6.66459e-52
NZ_CP030775.1\|WP_113886045.1\|418349_419993_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	6.83936e-40
NZ_CP030775.1\|WP_113886034.1\|398947_400951_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	4.91702e-101
NZ_CP030775.1\|WP_113886032.1\|395112_396096_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP030775.1\|WP_113886041.1\|410533_412540_+\|HAMP-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.47793e-48

>NZ_CP030775.1|WP_113886037.1|403263_404673_+|hypothetical-protein
MNNSKKIANIILSIILVVTIILTVLSSIIRFSATNKGIYLRLLEDSNTYSNVEQALSNKMVAILGNDISENLKESIITEQDIRKEADTVLDCIISDLIKGEANIPEIDTTIYKERVAKALNTLTGFEATIKNDKNLTSSIQSNDMCLTPINTVNSNEKLIGENMFNINNLNENRSNDLTLVNMASRAELEAQGRSMLKEKGLTEEEARRKAAERGISEQDVWNYLEENGYLDEESQSEESSDSGVQKDEVSDKSTDSSNSSNSTDSNETINNNVQADKSNANNDNKNNETKVSKKRIQEIVTSVLMDGNKNFDEKVNEISSKLMEEAEKIINAEMEKLNFSKVINSNEFNAAIKITSALYNNFYVLLLLIVIMCVLIFFVNKESVVNGLVIIGNSVLAAGVIMSLIFGYVYMSKVYTHIDINLNKAYFEPMFLQCAEYFSKLLCAISIIILFLGLIINIFMMKIKLTRR
>NZ_CP030775.1|WP_113886036.1|402565_403240_+|hypothetical-protein
MKMKKLLSMGAITLTLVTCTSMSVFAAESVGNRNEAAKKIAMNAWKGQKVINDVSIDADTAVNKYVNQALVDRVKACVNNSIEDKELAKKVNDTIQDMYKNGKGAKEIFEALQDINQTQGTDITTDATFKAAKAALQDMLNEFVDANGKSNSELSSIIKHYFNVSPYGTLEYGKNSNNRRVVTLKKGSKIVFQVNSENVYNLKDELENKINSWSDLKDYFGKIQ
>NZ_CP030775.1|WP_113886035.1|401188_402199_-|N-acetylmuramoyl-L-alanine-amidase-family-protein
MKGKMIKSFIAGLALVLGISAASPICASAAWKQDSNGWWNTEGNSYSTGWKQIDGAWYYFTSNGYMQTGWINDNGSWYYLNNNGAMKTGWINDNNSWYFLNANGVMQKGWINDNGAWYYTNESGVMHTGFLTLDNKTYYLNESGCMVTGDITLNGIKYSFDGNGEKIGLTTGETTGSTDATTENETVKDETTSGGGGGGGATSDSNDSTFASYSDLYGKWTVKSYIKNSGMNTSLSSDQIDLIVGEKFTVTKDKIYHTLYSVSNPTIDENILDNSEFKNKFGIDISNLGIKGDKVNCITISAEDESGVTRTGYVIVASNKSVYAIGKGAAFKLAKA
>NZ_CP030775.1|WP_113886034.1|398947_400951_+|ATP-binding-cassette-domain-containing-protein
MKLVQLKNINKYYDGSKKNRFHALKDIDISFERGEFIAIIGESGSGKSTLMNLIGGLDSDYSGDIIVEGNNINTYNQKQLDIYRKDKVGFIFQSFNLIPHLSVLDNVTIPMIISGASKSSRVKSGREILKKVGLEKYEDKKPDKLSGGQKQRVAIARALVNNPHIIIADEPTGSLDSHNTDQILNLINEIVKEGKLVIMVTHSEKVASCADRIVEIKDGLIVKDIRNKQIKEYEADLSYGEKYENGKRLNSNLHIKRKNKNLSVFSAVKLALTNMKEKFLRNILISLGASIGIMGVVLMLGFGNGIKTYFNNAMDNYVNPIVIEVNMPEAHEEFKDSDNIIDIPKMNSGTSFEEEDFEKLKSIENVDSVEKGYNVIAMGANSVSTDHGGCNIIRLATVSSGILESSLSSGNLPKEGEILINKSVADKLGENIIGQKVKLSILIGETKVKNEFIVSGIYEGAYGDFNSMIKCAFINYSDLEKIYTQNNRELKPNTAYITSSAENYTDGIKLKAEEMGYTGSSQEQMTNLFNEMISITTYVLSGIAAISLVVSSIMILVVLYMSVVERIKEIGILKAVGARKKDIRRIFVSEAFLIGIFSGLAGVGISIVIMKLINRMSLQIFSVDLLLIDTNHIITGICLSVIISIIAGVMPAAKASRLDPVDSLRRE
>NZ_CP030775.1|WP_035761370.1|398444_398951_+|VanZ-family-protein
MKNKFVLIAICFLCFGFILFNSSQISTVSNTRSREVVNNLIKVVSKTKAGEILLYKVNETELNLIVRKIAHAFEFFLLGIVLCFTFRYFKIDDNNLLIYTLFTVLFVAVIDEFFQIFIQNRTSSVVDVLIDFGGGILANTLFFIFSSARGKHYKKTTHMKRFVMEKNR
>NZ_CP030775.1|WP_113886033.1|396208_398215_-|methyl-accepting-chemotaxis-protein
MKKDKKSKKSISIRTMLIAGTLLLAIIPSLVISVMSISVTSKNNKKDTQVNSELLAKIGGNYINSEMEYFIDILNSVSNNEEFSTLDNEIDKNVLQHKFAMFLDSDSNILDIYYSDIKGNMILGTGESLPEDYKVLERPWFTKTMSSNEEYLIFDPYKDNLTEHMVISIYKKIVRNGQALGVLGIDIDLSVLSESLSYIKLGDEGHLIIVDNDGSIIVSSNHDLAGSTEASEYENWDYISKNSSGSINTSYDNTNYKVYFETETLTGWKVLIKIPVSQMNVVRNQVIVTNVIVSGFVIIFSILVVIFSSIKVSNLIVEVKNAINKAADCQFNFRFTSSGNSTEFKEVETSFNRMQENVTNLIAQVSNSIELVNNSAQDSVTMGENILTSMSDVSETINQIADGTMHSSGDLEEISSNLEVLSNNMDDIKTIVENVTNKAVEASKLGKEGINISDLVIDKSKLTKESTDSVSIVVKNVADSLKEIETMNETIGAITEQTNLLALNAAIEAARAGESGKGFAVVAEEIRKLAEETALSAKQINEIIKNIKSNTEITVEKVNDTSKNVVDQEEAIIKSQKIFSNIIDSVNELNSGVGEIFNNISKINTMKDSVVVQVAKLSVTLEETAAGSEEVASLSEEVTKAASDNKEKFSELGNSVKELENQITEFKI
>NZ_CP030775.1|WP_113886032.1|395112_396096_+|UDP-glucose-4-epimerase-GalE
MSYIVLGGAGYIGSHAVNKLIENNYDVIVVDNLQSGHEEAINSKAKFYKGDIRDKNFLSNVFKEENIDGVFHFAANSIVGESMKEPLMYFNNNVYGMQILLEVMNEHNVNKIVFSSTAATYGEPKHVPITEDMETCPTNTYGETKLVMEKMMKWCDKAYGMKYVALRYFNVAGAEDDGSIGEDHNPETHLIPIVLQAALGKRDHITIFGDDYDTEDGTCVRDYVHVVDLVEAHILAMKYLTHGGESNTFNLGSSQGFSVKEIVETARKVTDKNIKAIIGERRAGDPSKLIASSDKARKILGWNPIRTNIENIIKDAWLWHDTHKNGY
>NZ_CP030775.1|WP_113886031.1|393606_395055_+|oligosaccharide-flippase-family-protein
MSKSIAKNFFYNFMLQIVTLFMPLITVPYVSRILGKEGIGVYSYTLSIVQYFIILGTLGISMYGNRQIAYVRDNKEKMSKTFWSITFLKVITTSIALVIYIIIFGFNKQYGFIYLIQSLNIIAATIDISWLYMGLEDFKKTVTRNLIVKVICVISIFIFVKNYNDLYKYVLINAFMSLFGNLVMWMYVPKVVLRVKIKLNDIKLHIIPALQLFIPQIAIQIYAVLDKTMLGVLASTGEVGLYEQSQKIVKLVLGLVTSLGVVMLPRMSNTFANGDKKKMNEYLNTSLQGVAYVSIPMAVGLASISKEFVPWFFGPGFESVSYLMIILTPILFLIAMSNVLGMQYLLPSNRTKEFTLSVTVGAIINVVLNFILIPEFKAVGSCISTVIAEFGVTIIQYMCLKDSIKIKKIFRSVCKYIIASIFMFIGVRFIGLYMGAKMITTLMQGIIGVIIYVLILTSLKEEINLTAFTFILAKLNKNIKVR
>NZ_CP030775.1|WP_113886030.1|392506_393607_+|UDP-galactopyranose-mutase
MKYNYIIVGSGLFGSIFAYEANKRGKKCLVIDKRNHIGGNIYTKGIENINVHEYGAHIFHTSNKQVWDYINNFTEFNRYTNSPVAIYKDELYNMPFNMNTFNKLWGVKTPSEAKAKIEEQVKESNISEPKNLEEQAISLVGKDIYEKLVKGYTEKQWGTRATELPSFIIKRLPVRFTYDNNYFNDTYQGIPIGGYTKIIEKMLEGIEVKLGTDFFENRKELEGLADKIIFTGMIDEFYNYKFGTLEYRSLRFEHEILNEENHQGNAVVNYTEYDVPYTRIIEHKHFEYGNQPKTVITREYPAKWEKGDEPYYPINNEKNNTMYNKYKELADNETNVIFGGRLAEYKYYDMHNVIEQALKCVKEELK
>NZ_CP030775.1|WP_174255820.1|391524_392517_+|hypothetical-protein
MIIFKFIFFIPIMYTYFIGEFLYGNRELELLNKFSKLITILSVISITFWLFGSVLKLINSTNTIYLSWGNGRTILSYYNIYFETQKTTVGTLSFIRNSSIFTEAPMYSLLIIIALLYELYLSYNIKMKRIFILVVACLSSFSATGICLASIFIYIKLIFSRKNNKIIDLLLKFLTPILFICVILILKNMINVKSGTGSAFCRLDDYIASIKAWKDNILFGNGINNTLCIINYMNPERMSNLGLSNSLGVVLAQGGMYITAIYIYPCINIILKSIIQKRYNIVFFIFGLIILFILTIFMYNFILLLLISLAYSYIGILRLKEKGDGKRHEI
>NZ_CP030775.1|WP_113886039.1|406329_408111_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MIKRMNKLTALMVAATAVASIVPAVSASAAAKLEVQEGNIDAAVAYGDGKYVYDGYLTDDDESGLYFNNGTKDSFLENDEDYEFGSEKYGTKYTIVENDGEDYLLDLSSGKVLDDESIEDLRNNVELKLRTTLKKADDRYATVNNKIVFENNDEIAQVLGNQFGDVWYSYGVKSADSDKTLYGFANESGKYIDASALANMTVSTTDSAVRVTEFDKEKNDAMVSLAEAPKVIAQDSSYLYAITKVNVTIAGEADGTRTYIQKISKAQGDTKDGAYMPKSVDSYEISSNFYIDKDNDDTAKAEELLLDENNMVRVIKDTIYVTTVSEDGKVYVNTIKLKKEKVTKNDGTKKLDVYVAVKDQDDDEKIEGGANAVSIDAEGNTWAVNKGKIYKFNGTEFVEVYTCDRTIDHLDVYDENNLIAWNKDNEVFATVQTKSEEGTDEGDKEETKAGWVTNADGTWSYNKADGTKTTGWLLDGSTWYYFNANGVMQTGWVNVNGTWYYLNPVSNGYKGAMQTGWLNDNGTWYYLQSNGAMKTGWLNDNGTWYYLNSNGSMKTGWLLDTDGNWYYLQSNGAMAKNTTIDGYKLGSNGAWIR
>NZ_CP030775.1|WP_113886040.1|408548_410066_+|cadherin-like-beta-sandwich-domain-containing-protein
MRKLREGIAATVLALYSLIGIEMLSGSLTCVEAYAKNIEDKPYLKDIYVGLGYDIEFIKDKYEYIVDVDKDVEDIYVKTRPENENDIIKINGKVITKDDKFKKDLSLEMGKNKVVIEVIKNNDNNEEEYTDNDDDFSDDDVQNDKDKYGSAQDKTVYTLYIYRGGADEVYLKNITLDKSNIGYFVNKKNYNIESDENGQLVRLEVETFGDEYSVFVNGNKLDFTNSLSLKFKGIGKYTITLDVVDDETKRKSTYVLNIYRGIPVTPNVSDSINSVLKPNQWVIVNGRWRYNDAIGQPLKNTWFFDMNYNSYFYFNGRGNMKTGWINEGGNTYYLGNDGMMRTGWVEYEGKWYYLDMNGVMRTDWVKNNGEWYYLDQDGSMKTGWIVDKENWYYLNNDGSMETGWILDYKKWYYLSQNGAMKTGWAQYKDDWYYLNNDGSMKSGEWVEYKNKWYYINYSGTMRCGWLYKDDKYYYFNEDGSMRTEPIVLDGYLYNFNEDGSVNFND
>NZ_CP030775.1|WP_113886041.1|410533_412540_+|HAMP-domain-containing-protein
MWHAKINKKGDKYIPIKYKILSVILPVIILAIGGLITVSYNKSSKIIEENSYSMLESSVKNQTIQIENWLENNLQTFNTIKKSLGSTQYSQEELKKILNQYYNFNSNFLDGLYISDLQGNVISADNSQMKFENATSSQWFKEGLTHIKMRYGEAHDDYAGNKVISATGLIVDNDNNPVGVIGADVTLNRISIIVNSLIEMDDAQSFLVNKDTGMVLASSDSLEPYTILGENNENLLYSKIAQSIESGQYSAQEIENNIVDMHDVKNTRWILVSYVPKSSILSSMFTLRNYMVIIAIVALAVLVLITHRTINYIINPVNDISKKIVKMAEGDFSIDIDVKSNDEIAVMSQSLKNFIESMKVMLNDIKDISMEQKNQSFESKNISEHLFDSSKQQAESMNNLNIVVGEMAEATNQIADTATSLAGIACETNDNGNKVKDKMIETVKMSEVGKKDMEHVEISIRTIETSIKELKDVIDEVGKSSEEINSIVSIIGEIAESTNLLALNASIEAARAGEAGKGFSVVASEIGTLANNSASSVNDIAKLINNINKLISNVVSKVNESVNHVNESSELITDSVRKFDNIYNTINESDKLVADMLKKVEEVGKAADNMAAISEEQAASSEEISSTSQDMLEHSQNITESSYNVAKGADVLSDIAKQLESEVEKFKL
>NZ_CP030775.1|WP_113886042.1|412554_413532_+|substrate-binding-domain-containing-protein
MKKLLSLLMVFVLMFTALGCSKNGSKGTSIGNTKVFASIADDDKFKQTIVSGMESYADENNVDLDVAIADNNVERQVQQIKDAKTNGYDVIVCILVESDTAQQIINAAGDIPVIFTNVEPDSGRLKSDKYIYVGSDENEAAKYTFESLKEYFKDKKSFNAVLFEGSMDSKSASVRTESLKSQLKKNGFDVNYVFQDDAGWGREKAKKMFEAFLKLNESYDCIISNNDDMALGVIDAMEENGIDPSKVPILGLDATPEACKAISNGKMSFSIKQSGEGQGESVIKAAQALKNGDKISEIENGDSSGKYIWYPYSKVDKSNVQQYMR
>NZ_CP030775.1|WP_113886043.1|414052_416290_+|cadherin-like-beta-sandwich-domain-containing-protein
MRAKFNFKRVFAYLLIFAMTFSFVQMGQANPVKAATSGSKEVNDSFKFIIGDASSGTTKDVDMDYSGDLVLRSVTLSQTYTIMPQAGYNIESVKSSSDKMKITKAVSGTTNTFTIGTIKDYSNFKLTVKVKNSSGEINTYDIRVEFNIDSSLEFNKLRITVDNDDPVTLTYTQCDSEGIYYYEESNPEAKKAKIEMFDDSNNAMSFKVNGGTNKIVNLVGGDNTIELTVTSAGYSKVYTLVITKKGVAKLKSLVPSTGSLSPSFNSDTTEYTVTVPTTQETIAFTPTAVDNSSTIKVKKITVASGKKSQDIKLDEGENEIPIVVTNKDGDVTTYKVTVTRTEKFRSANLKSLKLTSGTLSPTFNKGVYQYTTIVENTVSSVGVTPVAEDTNATIEVNGKEIPSGATSPYINLDEGGNVINVTVTDSKGNDNTYVIMITRKYSKNNVNLSSLSVTDGTFSPKFDPEIYAYSVKVPRNIEEVRIKFETQNEKSKVTINGVEYKSGQQSDKIKLDLGANTVVVKVVSEDNKSTVNYTLSIIRDKVQGTLNDWVLVGGEWMYYDGDGIPAKNRWVKYDNQWYHVDVNGYMNKDGWLFDGGKWYYLDPNGIMLYGWIKDTGFWYYLRESGEMVEDSWTMLDGNWYFFNQYGQMQTGWTLYKGKWYYLDDHGVMQKGWITYDKNKYYLDDDGTMRTGWLYNGKVWYYFESSGRMVTGWQTIGNRSYYFDSKGAMKTGMLFLDGRWINLDSL
>NZ_CP030775.1|WP_113886044.1|416766_417759_+|IS1-family-transposase
MIERDWEFEKIKKYKENALRENIYNKGNVKKYKECPYCGSKSFIKYGKYNGIQRYKCKNEECKKTFSNTTNSVWKYLKHKPEKWFEFIELMGEHTTLNECAAKLEISIVTAFYWRHKIFHAIENNYKPEKFDQVVDVDTYYTEKCYKGSRNKNYTYADKVKNKFDKMYGLVPRSVSVLIAEESGKMPLIRRTENDETIVNNFNNNVLKIAAKDCYMRTDYFTNKKLKNNLLQYNKKLSNETKKKYGLKIIGNRIEDKIKKDKKKNIMAYLTAWLSRYKGIATKYINHYYNFYSLIDSEKVFDYMSIFFDLLKNGSYTSVEVLRTNHVEDY
>NZ_CP030775.1|WP_113886045.1|418349_419993_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MIKRLKKTSALIVLATTLATIVPVGNMQIRAEAADKYSNEFSNNYNIESLENNISLASEETAEDKQIAGKITQYINGKYPGATVKVQSPKYIKLTITKSIAEKMATQICSSNDTIRQILKNEPNLVKPGASQEEVNKIVDSMTDEQIESVKPKVYNAVYQTILAFNGQSVPIYGYEVMNGDQIEDAGYFVGGKIGALIMQKDGKPLCISVDQIKDFNEQIKNKILEDIKEKISEIIQNSGITEIIDKVLKKVNSVVSDVTDTIEDLSDAIDDLTDSIKDKADDIDDAWDKVFDRFDNDEGWGKKDGYMYYYDKDGISLKGVQKIDGKTYYFNRIDGAMETGWQIVDGKRCYFDEKKGYQLFLQWVQDGEDWYFLSDQGPVKKSEWVNDNGRKYYLKSDGKMTKDWLKIDDDWYYFNGSTGVMEYSTWKYSNDKWYYLNQDGKAANDWTYINENWYYFRENSCSMETGWFRADGSWYYSDSTGAMKTGWIQGDDGWYYLDDTSGKMKKNEWVYSNGSWYYFNINGAMVTKARYIDGVKYNFNSDGRMA
>NZ_CP030775.1|WP_113886046.1|420639_423645_+|Ig-like-domain-containing-protein
MKRDLIKKLICCMAITACISSTMPVDVYAATWMNDNMGNYYFYESNTYAVGWRNIDGTVYYFDASGVMQKGWIKYGDSWYYLDNNGALKTGWINYNGEWYYSNSAGIMQTGILLIDGQTYYFGNNGVMKKGNVIINGQFYTIGVNGAIVSNAVPVPDKVFDRNNNCIKQINSVDSTTIMTPDGSKYDNPIVDQSEDGDYEEPARKFTVTFRDENGQELKTKNITDGDTVKMYEPDDENGKGDEDRNFIEWNTKRDGSGKSYDSDEKVKVTKDLTLYARWEELEEQTLVSSISITGSNEVEIGKTTQLTAEVKPSDATNTKVKWSIVDNEDGTASGKASIDQNGVLTGLENGLGKITVKAEAMDKSDVSTTKVITVVEAKNLIESIKINGPDTISEDGAVVKLTADVSPETASNTNVSWKITDGSEYAEIDRDTGELKALADGKVTVMASAKDGSGISATKTINITGQSVKATKIQVSGYENVKTVSTGKKLQMVARIYPDNVASANDEVEWSAVYTSGEKIGEQVSINEGTIGVIGDAAGQRLKYAVLNPEYRGKVEVTARSKSDSSILGKTTITVVKDAESVDIKAIDTSGNDITNKPEITTNAGKLNLKAVLNPSDTTDTSSVKWSMELVNGDGEDTEVSNYATLTPSETSAVIAAKKNGEIKVIATANDSSKAIGEITIKIDGQKIYAKEISLYQDGDESKPVKEGYEFNIQKGASITVEGKVGPDNATNKNIEWSVLGAKDYVTSKIDGNKLTITANKDLSSEMAAVRIKAVADNIIKEFKINVYENIQGVNISTPSAVVLGQDFKATSTLFPVNVNGDKIKLSVVTKMDDGSLTGSAFINGEVEVSRNTTTATITPVNTGTIKLKAVATLNDSEQTYTTGEINILNPIDNIIIEGTNNSFTLENGQTRNANLTAKVNGAPAGGYSSFLKWEIKSQPSNVIAKVDGNTGIVSVTRTGDIAVGSQVIVRVSANYDSTKYSEFIIGVSNAPVVDSTATS
>NZ_CP030775.1|WP_002582348.1|423856_424906_+|InlB-B-repeat-containing-protein
MRNKFLNKLIAVSIALTAVTVMIPMKTEAAWINNYYGGFAYSNGYYLSTGWNMINGTWYYFNSLGVMQTGWLNSNGTWYYLDQSGAMQTGVIQVEGKIYLLGPSGGMQTGSNIINGKMYYFGPDGVCMGTDVPTPLKGYDYYGNPVQPYVPSQISNPNAVMDSNIPLENGQKIEEQYRVYYKDDDGDLILTKRIDADTKITLYEPDKAGYEFIEWNTKKNGNGTSYDAGDKVKLTGDLTLYAQWDEVETDDDSDEDTIKVTGITLGAVGYTGTTINISVGDTVQFTRKIAPSTATNTKVTWSVKNGSTGKAEITSTGKLTALQPGTVTVRATATDGSKVFKEMTVIIEN
>NZ_CP030775.1|WP_002582347.1|425950_427546_+|peptide-chain-release-factor-3
MADYIKEIEKRRTFAIISHPDAGKTTLTEKFLLYGGAIRLAGSVKARKASKHAVSDWMEIEKQRGISVTSSVMQFNYNDHCINILDTPGHQDFSEDTYRTLMAADSAVMVVDAAKGIEDQTRKLFQVASLREMPIFTFVNKMDREARDPFQLLDDIENELGIKTYPMNWPIGSGKEFKGVYERDNNRIIAFNGGNHGQNEVEAIEGTPDDPKFREILGEALHDKLMEDIELLDIAGDELDLEAVRNGELTPVFFGSALTNFGVEPFLEHFLEMTTAPLARHSSVGDIDPFEDKFSAFVFKIQANMNKAHRDRIAFMRICSGKFNKGEDVYHMQGGKKIKLAQPQQFMAQDREIVEEAYAGDIIGVFDPGIFSIGDTLCAASKKFKFEGIPTFAPEHFARVRPVDTMKRKQFVKGCTQIAQEGAIQVFKEIHIGMEEIIVGVVGVLQFEVLEYRLKNEYNVDIKMDRLDYRYVRWIEDQSIDMDSLNLTSDTKKVKDMKDRNLLIFQNDWGISWALDHNKDLVLSAVGKNDD

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Crispr_ID: NZ_CP030775_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030775_3

420482-420570

Orphan

Consensus_repeat	Method
GTCTTATATTAACAATTGTATATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030775_3

>merge|NZ_CP030775|3|420482-420570|CRISPRCasFinder
GTCTTATATTAACAATTGTATATTTGAAATACTTATAATTTAATTTTAGACTTTACATATCTTATGTCTTATATGAACAATTGTATATT

>NZ_CP030775|3|3|420482-420570|CRISPRCasFinder
GTCTTATATTAACAATTGTATATT	TGAAATACTTATAATTTAATTTTAGACTTTACATATCTTAT
GTCTTATATGAACAATTGTATATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030775.1\|WP_113886046.1\|420639_423645_+\|Ig-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886043.1\|414052_416290_+\|cadherin-like-beta-sandwich-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886040.1\|408548_410066_+\|cadherin-like-beta-sandwich-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886038.1\|404679_405699_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886039.1\|406329_408111_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886037.1\|403263_404673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_002582347.1\|425950_427546_+\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP030775.1\|WP_027636894.1\|433037_433436_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113886044.1\|416766_417759_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|226202
NZ_CP030775.1\|WP_113886047.1\|430682_432695_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP030775.1\|WP_113886042.1\|412554_413532_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380481
NZ_CP030775.1\|WP_113886475.1\|427888_430129_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP030775.1\|WP_058229321.1\|437394_438387_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226202
NZ_CP030775.1\|WP_113886036.1\|402565_403240_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_002582348.1\|423856_424906_+\|InlB-B-repeat-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886048.1\|441037_441736_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|227093
NZ_CP030775.1\|WP_113886041.1\|410533_412540_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP030775.1\|WP_003423843.1\|438995_440846_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|270700
NZ_CP030775.1\|WP_103673591.1\|433836_436908_+\|cadherin-like-beta-sandwich-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886045.1\|418349_419993_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588

Protein	Function_ID	Function_description	E-value
NZ_CP030775.1\|WP_113886046.1\|420639_423645_+\|Ig-like-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	6.82467e-25
NZ_CP030775.1\|WP_113886043.1\|414052_416290_+\|cadherin-like-beta-sandwich-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	5.69542e-35
NZ_CP030775.1\|WP_113886040.1\|408548_410066_+\|cadherin-like-beta-sandwich-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	7.41107e-39
NZ_CP030775.1\|WP_113886038.1\|404679_405699_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	2.42705e-34
NZ_CP030775.1\|WP_113886039.1\|406329_408111_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.08057e-34
NZ_CP030775.1\|WP_058229321.1\|437394_438387_+\|hypothetical-protein	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.3738e-08
NZ_CP030775.1\|WP_002582347.1\|425950_427546_+\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP030775.1\|WP_113886047.1\|430682_432695_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	2.0021e-68
NZ_CP030775.1\|WP_113886042.1\|412554_413532_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|380481	cd01539, PBP1_GGBP, periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. GGBP is a member of the pentose/hexose sugar-binding protein family of the type 1 periplasmic binding protein superfamily which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic GGBP is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.	1.85938e-60
NZ_CP030775.1\|WP_113886475.1\|427888_430129_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.14797e-60
NZ_CP030775.1\|WP_113886044.1\|416766_417759_+\|IS1-family-transposase	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.82679e-09
NZ_CP030775.1\|WP_002582348.1\|423856_424906_+\|InlB-B-repeat-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.57954e-16
NZ_CP030775.1\|WP_113886048.1\|441037_441736_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|227093	COG4750, LicC, CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane].	3.83192e-71
NZ_CP030775.1\|WP_113886041.1\|410533_412540_+\|HAMP-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.47793e-48
NZ_CP030775.1\|WP_003423843.1\|438995_440846_+\|phosphotransferase	gnl\|CDD\|270700	cd05151, ChoK-like, Choline Kinase and similar proteins. This subfamily is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate and displays negligible activity towards N-methylated derivatives of Etn. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.58556e-49
NZ_CP030775.1\|WP_103673591.1\|433836_436908_+\|cadherin-like-beta-sandwich-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	2.73428e-19
NZ_CP030775.1\|WP_113886045.1\|418349_419993_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	6.83936e-40

>NZ_CP030775.1|WP_113886045.1|418349_419993_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MIKRLKKTSALIVLATTLATIVPVGNMQIRAEAADKYSNEFSNNYNIESLENNISLASEETAEDKQIAGKITQYINGKYPGATVKVQSPKYIKLTITKSIAEKMATQICSSNDTIRQILKNEPNLVKPGASQEEVNKIVDSMTDEQIESVKPKVYNAVYQTILAFNGQSVPIYGYEVMNGDQIEDAGYFVGGKIGALIMQKDGKPLCISVDQIKDFNEQIKNKILEDIKEKISEIIQNSGITEIIDKVLKKVNSVVSDVTDTIEDLSDAIDDLTDSIKDKADDIDDAWDKVFDRFDNDEGWGKKDGYMYYYDKDGISLKGVQKIDGKTYYFNRIDGAMETGWQIVDGKRCYFDEKKGYQLFLQWVQDGEDWYFLSDQGPVKKSEWVNDNGRKYYLKSDGKMTKDWLKIDDDWYYFNGSTGVMEYSTWKYSNDKWYYLNQDGKAANDWTYINENWYYFRENSCSMETGWFRADGSWYYSDSTGAMKTGWIQGDDGWYYLDDTSGKMKKNEWVYSNGSWYYFNINGAMVTKARYIDGVKYNFNSDGRMA
>NZ_CP030775.1|WP_113886044.1|416766_417759_+|IS1-family-transposase
MIERDWEFEKIKKYKENALRENIYNKGNVKKYKECPYCGSKSFIKYGKYNGIQRYKCKNEECKKTFSNTTNSVWKYLKHKPEKWFEFIELMGEHTTLNECAAKLEISIVTAFYWRHKIFHAIENNYKPEKFDQVVDVDTYYTEKCYKGSRNKNYTYADKVKNKFDKMYGLVPRSVSVLIAEESGKMPLIRRTENDETIVNNFNNNVLKIAAKDCYMRTDYFTNKKLKNNLLQYNKKLSNETKKKYGLKIIGNRIEDKIKKDKKKNIMAYLTAWLSRYKGIATKYINHYYNFYSLIDSEKVFDYMSIFFDLLKNGSYTSVEVLRTNHVEDY
>NZ_CP030775.1|WP_113886043.1|414052_416290_+|cadherin-like-beta-sandwich-domain-containing-protein
MRAKFNFKRVFAYLLIFAMTFSFVQMGQANPVKAATSGSKEVNDSFKFIIGDASSGTTKDVDMDYSGDLVLRSVTLSQTYTIMPQAGYNIESVKSSSDKMKITKAVSGTTNTFTIGTIKDYSNFKLTVKVKNSSGEINTYDIRVEFNIDSSLEFNKLRITVDNDDPVTLTYTQCDSEGIYYYEESNPEAKKAKIEMFDDSNNAMSFKVNGGTNKIVNLVGGDNTIELTVTSAGYSKVYTLVITKKGVAKLKSLVPSTGSLSPSFNSDTTEYTVTVPTTQETIAFTPTAVDNSSTIKVKKITVASGKKSQDIKLDEGENEIPIVVTNKDGDVTTYKVTVTRTEKFRSANLKSLKLTSGTLSPTFNKGVYQYTTIVENTVSSVGVTPVAEDTNATIEVNGKEIPSGATSPYINLDEGGNVINVTVTDSKGNDNTYVIMITRKYSKNNVNLSSLSVTDGTFSPKFDPEIYAYSVKVPRNIEEVRIKFETQNEKSKVTINGVEYKSGQQSDKIKLDLGANTVVVKVVSEDNKSTVNYTLSIIRDKVQGTLNDWVLVGGEWMYYDGDGIPAKNRWVKYDNQWYHVDVNGYMNKDGWLFDGGKWYYLDPNGIMLYGWIKDTGFWYYLRESGEMVEDSWTMLDGNWYFFNQYGQMQTGWTLYKGKWYYLDDHGVMQKGWITYDKNKYYLDDDGTMRTGWLYNGKVWYYFESSGRMVTGWQTIGNRSYYFDSKGAMKTGMLFLDGRWINLDSL
>NZ_CP030775.1|WP_113886042.1|412554_413532_+|substrate-binding-domain-containing-protein
MKKLLSLLMVFVLMFTALGCSKNGSKGTSIGNTKVFASIADDDKFKQTIVSGMESYADENNVDLDVAIADNNVERQVQQIKDAKTNGYDVIVCILVESDTAQQIINAAGDIPVIFTNVEPDSGRLKSDKYIYVGSDENEAAKYTFESLKEYFKDKKSFNAVLFEGSMDSKSASVRTESLKSQLKKNGFDVNYVFQDDAGWGREKAKKMFEAFLKLNESYDCIISNNDDMALGVIDAMEENGIDPSKVPILGLDATPEACKAISNGKMSFSIKQSGEGQGESVIKAAQALKNGDKISEIENGDSSGKYIWYPYSKVDKSNVQQYMR
>NZ_CP030775.1|WP_113886041.1|410533_412540_+|HAMP-domain-containing-protein
MWHAKINKKGDKYIPIKYKILSVILPVIILAIGGLITVSYNKSSKIIEENSYSMLESSVKNQTIQIENWLENNLQTFNTIKKSLGSTQYSQEELKKILNQYYNFNSNFLDGLYISDLQGNVISADNSQMKFENATSSQWFKEGLTHIKMRYGEAHDDYAGNKVISATGLIVDNDNNPVGVIGADVTLNRISIIVNSLIEMDDAQSFLVNKDTGMVLASSDSLEPYTILGENNENLLYSKIAQSIESGQYSAQEIENNIVDMHDVKNTRWILVSYVPKSSILSSMFTLRNYMVIIAIVALAVLVLITHRTINYIINPVNDISKKIVKMAEGDFSIDIDVKSNDEIAVMSQSLKNFIESMKVMLNDIKDISMEQKNQSFESKNISEHLFDSSKQQAESMNNLNIVVGEMAEATNQIADTATSLAGIACETNDNGNKVKDKMIETVKMSEVGKKDMEHVEISIRTIETSIKELKDVIDEVGKSSEEINSIVSIIGEIAESTNLLALNASIEAARAGEAGKGFSVVASEIGTLANNSASSVNDIAKLINNINKLISNVVSKVNESVNHVNESSELITDSVRKFDNIYNTINESDKLVADMLKKVEEVGKAADNMAAISEEQAASSEEISSTSQDMLEHSQNITESSYNVAKGADVLSDIAKQLESEVEKFKL
>NZ_CP030775.1|WP_113886040.1|408548_410066_+|cadherin-like-beta-sandwich-domain-containing-protein
MRKLREGIAATVLALYSLIGIEMLSGSLTCVEAYAKNIEDKPYLKDIYVGLGYDIEFIKDKYEYIVDVDKDVEDIYVKTRPENENDIIKINGKVITKDDKFKKDLSLEMGKNKVVIEVIKNNDNNEEEYTDNDDDFSDDDVQNDKDKYGSAQDKTVYTLYIYRGGADEVYLKNITLDKSNIGYFVNKKNYNIESDENGQLVRLEVETFGDEYSVFVNGNKLDFTNSLSLKFKGIGKYTITLDVVDDETKRKSTYVLNIYRGIPVTPNVSDSINSVLKPNQWVIVNGRWRYNDAIGQPLKNTWFFDMNYNSYFYFNGRGNMKTGWINEGGNTYYLGNDGMMRTGWVEYEGKWYYLDMNGVMRTDWVKNNGEWYYLDQDGSMKTGWIVDKENWYYLNNDGSMETGWILDYKKWYYLSQNGAMKTGWAQYKDDWYYLNNDGSMKSGEWVEYKNKWYYINYSGTMRCGWLYKDDKYYYFNEDGSMRTEPIVLDGYLYNFNEDGSVNFND
>NZ_CP030775.1|WP_113886039.1|406329_408111_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MIKRMNKLTALMVAATAVASIVPAVSASAAAKLEVQEGNIDAAVAYGDGKYVYDGYLTDDDESGLYFNNGTKDSFLENDEDYEFGSEKYGTKYTIVENDGEDYLLDLSSGKVLDDESIEDLRNNVELKLRTTLKKADDRYATVNNKIVFENNDEIAQVLGNQFGDVWYSYGVKSADSDKTLYGFANESGKYIDASALANMTVSTTDSAVRVTEFDKEKNDAMVSLAEAPKVIAQDSSYLYAITKVNVTIAGEADGTRTYIQKISKAQGDTKDGAYMPKSVDSYEISSNFYIDKDNDDTAKAEELLLDENNMVRVIKDTIYVTTVSEDGKVYVNTIKLKKEKVTKNDGTKKLDVYVAVKDQDDDEKIEGGANAVSIDAEGNTWAVNKGKIYKFNGTEFVEVYTCDRTIDHLDVYDENNLIAWNKDNEVFATVQTKSEEGTDEGDKEETKAGWVTNADGTWSYNKADGTKTTGWLLDGSTWYYFNANGVMQTGWVNVNGTWYYLNPVSNGYKGAMQTGWLNDNGTWYYLQSNGAMKTGWLNDNGTWYYLNSNGSMKTGWLLDTDGNWYYLQSNGAMAKNTTIDGYKLGSNGAWIR
>NZ_CP030775.1|WP_113886038.1|404679_405699_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MKSLNLKKLVAMALTLVTVTAVSPVAASAAWKQDAKGWWNTEGNSWSIGWRQIDGTWYHFDETGYMSTGWINDNGTWYYAAQSGAMQTGWVIDYSAGYGQWYFTDQSGAMKTGWMQDAGKWYFLQPSGAMKTGWINDNGTWYFAEGSGAMLTGVIKVDGQTYYLQSNGAMATGEVEINGVKYTFGTNGACIGDAPKADKVFGTTDSGNNSGSSNTDKDTDSDSGSSGGSSHGGGGSSSSTPAAIKDYSTSANITVENVSDKEADVDTYKIAFKNTLTKSKDGDYVVRDLYVTNEDAIISEEDGGYLVEVKKGSTLDAKGVIRVVRDGKVYYATGIAITK
>NZ_CP030775.1|WP_113886037.1|403263_404673_+|hypothetical-protein
MNNSKKIANIILSIILVVTIILTVLSSIIRFSATNKGIYLRLLEDSNTYSNVEQALSNKMVAILGNDISENLKESIITEQDIRKEADTVLDCIISDLIKGEANIPEIDTTIYKERVAKALNTLTGFEATIKNDKNLTSSIQSNDMCLTPINTVNSNEKLIGENMFNINNLNENRSNDLTLVNMASRAELEAQGRSMLKEKGLTEEEARRKAAERGISEQDVWNYLEENGYLDEESQSEESSDSGVQKDEVSDKSTDSSNSSNSTDSNETINNNVQADKSNANNDNKNNETKVSKKRIQEIVTSVLMDGNKNFDEKVNEISSKLMEEAEKIINAEMEKLNFSKVINSNEFNAAIKITSALYNNFYVLLLLIVIMCVLIFFVNKESVVNGLVIIGNSVLAAGVIMSLIFGYVYMSKVYTHIDINLNKAYFEPMFLQCAEYFSKLLCAISIIILFLGLIINIFMMKIKLTRR
>NZ_CP030775.1|WP_113886036.1|402565_403240_+|hypothetical-protein
MKMKKLLSMGAITLTLVTCTSMSVFAAESVGNRNEAAKKIAMNAWKGQKVINDVSIDADTAVNKYVNQALVDRVKACVNNSIEDKELAKKVNDTIQDMYKNGKGAKEIFEALQDINQTQGTDITTDATFKAAKAALQDMLNEFVDANGKSNSELSSIIKHYFNVSPYGTLEYGKNSNNRRVVTLKKGSKIVFQVNSENVYNLKDELENKINSWSDLKDYFGKIQ
>NZ_CP030775.1|WP_113886046.1|420639_423645_+|Ig-like-domain-containing-protein
MKRDLIKKLICCMAITACISSTMPVDVYAATWMNDNMGNYYFYESNTYAVGWRNIDGTVYYFDASGVMQKGWIKYGDSWYYLDNNGALKTGWINYNGEWYYSNSAGIMQTGILLIDGQTYYFGNNGVMKKGNVIINGQFYTIGVNGAIVSNAVPVPDKVFDRNNNCIKQINSVDSTTIMTPDGSKYDNPIVDQSEDGDYEEPARKFTVTFRDENGQELKTKNITDGDTVKMYEPDDENGKGDEDRNFIEWNTKRDGSGKSYDSDEKVKVTKDLTLYARWEELEEQTLVSSISITGSNEVEIGKTTQLTAEVKPSDATNTKVKWSIVDNEDGTASGKASIDQNGVLTGLENGLGKITVKAEAMDKSDVSTTKVITVVEAKNLIESIKINGPDTISEDGAVVKLTADVSPETASNTNVSWKITDGSEYAEIDRDTGELKALADGKVTVMASAKDGSGISATKTINITGQSVKATKIQVSGYENVKTVSTGKKLQMVARIYPDNVASANDEVEWSAVYTSGEKIGEQVSINEGTIGVIGDAAGQRLKYAVLNPEYRGKVEVTARSKSDSSILGKTTITVVKDAESVDIKAIDTSGNDITNKPEITTNAGKLNLKAVLNPSDTTDTSSVKWSMELVNGDGEDTEVSNYATLTPSETSAVIAAKKNGEIKVIATANDSSKAIGEITIKIDGQKIYAKEISLYQDGDESKPVKEGYEFNIQKGASITVEGKVGPDNATNKNIEWSVLGAKDYVTSKIDGNKLTITANKDLSSEMAAVRIKAVADNIIKEFKINVYENIQGVNISTPSAVVLGQDFKATSTLFPVNVNGDKIKLSVVTKMDDGSLTGSAFINGEVEVSRNTTTATITPVNTGTIKLKAVATLNDSEQTYTTGEINILNPIDNIIIEGTNNSFTLENGQTRNANLTAKVNGAPAGGYSSFLKWEIKSQPSNVIAKVDGNTGIVSVTRTGDIAVGSQVIVRVSANYDSTKYSEFIIGVSNAPVVDSTATS
>NZ_CP030775.1|WP_002582348.1|423856_424906_+|InlB-B-repeat-containing-protein
MRNKFLNKLIAVSIALTAVTVMIPMKTEAAWINNYYGGFAYSNGYYLSTGWNMINGTWYYFNSLGVMQTGWLNSNGTWYYLDQSGAMQTGVIQVEGKIYLLGPSGGMQTGSNIINGKMYYFGPDGVCMGTDVPTPLKGYDYYGNPVQPYVPSQISNPNAVMDSNIPLENGQKIEEQYRVYYKDDDGDLILTKRIDADTKITLYEPDKAGYEFIEWNTKKNGNGTSYDAGDKVKLTGDLTLYAQWDEVETDDDSDEDTIKVTGITLGAVGYTGTTINISVGDTVQFTRKIAPSTATNTKVTWSVKNGSTGKAEITSTGKLTALQPGTVTVRATATDGSKVFKEMTVIIEN
>NZ_CP030775.1|WP_002582347.1|425950_427546_+|peptide-chain-release-factor-3
MADYIKEIEKRRTFAIISHPDAGKTTLTEKFLLYGGAIRLAGSVKARKASKHAVSDWMEIEKQRGISVTSSVMQFNYNDHCINILDTPGHQDFSEDTYRTLMAADSAVMVVDAAKGIEDQTRKLFQVASLREMPIFTFVNKMDREARDPFQLLDDIENELGIKTYPMNWPIGSGKEFKGVYERDNNRIIAFNGGNHGQNEVEAIEGTPDDPKFREILGEALHDKLMEDIELLDIAGDELDLEAVRNGELTPVFFGSALTNFGVEPFLEHFLEMTTAPLARHSSVGDIDPFEDKFSAFVFKIQANMNKAHRDRIAFMRICSGKFNKGEDVYHMQGGKKIKLAQPQQFMAQDREIVEEAYAGDIIGVFDPGIFSIGDTLCAASKKFKFEGIPTFAPEHFARVRPVDTMKRKQFVKGCTQIAQEGAIQVFKEIHIGMEEIIVGVVGVLQFEVLEYRLKNEYNVDIKMDRLDYRYVRWIEDQSIDMDSLNLTSDTKKVKDMKDRNLLIFQNDWGISWALDHNKDLVLSAVGKNDD
>NZ_CP030775.1|WP_113886475.1|427888_430129_+|N-acetylmuramoyl-L-alanine-amidase
MILGLVPTLSVQAATTDFKIISKTEVTAAQAKKWAQSKGATDTFADLAKLYWKYAEECGGVNPGIAYVQAAKETGYGRFGGVLDESYNNPCGMKTSSGGGDYDKEAHQRFNSWDEGVQAHMDHLALYAGADGYPKANTYDPRHFVTIKGRATTTNSLGGKWAPSATYGEEIGKLYMSLMDSAGVTFEKDEDEDLWEDVEDEEDTSAAPNPGTVEKKPADLSIEEAIKLPEKITNDTSGTDSSQGSGNDSPNITSTIGWKNVDGNWYYYKSDETKAFGWIKPDSNWYYLDDADGKMVRGWLKNNNKWYYLDESGAMITGWKLIDSKWYLFDKNGIMTTGVQNDGNSSYYLDKSGAMIEEQGWKKIEDKWIYLEKGGKIKLGWLKENNAWYYLQGDGSMVNGLKRIDGQVYSFYDNGTMQTGWKSVNSNWYYFKSSGEMATGWTYDGDTCYYLYDNGAMAKGWITIGDSWYLLSSSGVMQTGWVTSNGDTYYLDKSTGRMVTNTTVDGYKIGKDGKRKGKVNQGDSNSNNSNSNNSNSNNSQTGPGSAGKVIYVDAGHDYGKDSGAVATINGVTYSETDLNMQVADKLKTSLENRGYTVIMTRNLGERPSFSSLTESLSYRVNKANNANADLFISIHHNSAGETAKGIETLYSEVSQDAAFGGQYDSTRIAKSKSLASEINNNIASSLDLTNRGGKSQNLYVCRNTKMPAVLVEVGFITNAEEAVRCSDPSSQQKVAEAIAAVVSKYY
>NZ_CP030775.1|WP_113886047.1|430682_432695_+|N-acetylmuramoyl-L-alanine-amidase
MKIRERLASFFIALFVAFSFIPSMKVMADTVADINIISDTKVTVAQAEKWAKSKGATDTFISLAKLYFKYADECGNVNPGIAYVQAAKETGYGKFGGVLDESYHNPCGMKTSSGGGDYDPNAHQKFNSWDEGVQAHLDHLALYAGADGYPKSDTFDPRHFVTIKGKAPTVNSLGGKWAPSTVYGEEVNSLYRDLLKSAGVTIGSEEIPNEDNSGNNSGSNSGSGSNSNGSNNSGTPGGSTNVQPPKDTVEPQGLPVNKPIAITADNSTNISSNIGWKLEGGRWYYYRSDGSKATGWIKPDANWYYLYSDGVMANGWVQLGSSWYYLQSSGAMKLGWFKDGSKWYYLQGNGAMVTGFNSIDGKTYFLDSSGAMRTSWFKISGQWYYFNTDGSMLTGWIRPDGNWYYLFSNGIMASGWLARDGELYCLSESGVMQTGWVYEKGGYYYFHPTSGKMLRDTVVDGWEIGPDGKRGDRVGGGSSKLIVIDPGHNFGGDDGAYGYHSGVTYSERDLNMQVALKLKTKLEAYGYQVVMTRNESDRETLSVSESLAKRVNLANSLNADFFVSLHHNSAGSESANGVETYYSSNASNSNNISISRNMATKINNAIVGKTGQYNRGAKDGNLYVCRNTNMPSVLVELGFVSNPTEAAKCATWTNQDLAASAIAEAIASSI
>NZ_CP030775.1|WP_027636894.1|433037_433436_+|hypothetical-protein
MNWFRKFMYGRYGVDELSMVLVGVSIALLLLSSLLPRSLSILSLIAYIPMVIYIFRIFSKNIFKRQQENYKYISFKNSMLSKAKKYKGKIQGAKTHKYFKCPSCGQELRVPKGNGKITITCPKCKTSFKAKS
>NZ_CP030775.1|WP_103673591.1|433836_436908_+|cadherin-like-beta-sandwich-domain-containing-protein
MKKIVKRLLALLIVFASMFSFLPLQFGDNGQEANAANDSSVDISYADLSLRVVGGTSILDKKTDDTVGKLPYYNTSDGENTFDLTISDFSKTENQIKEELLKKYPEGGSGETTYVSNAYMNIISLNNIKLATRSGAEIPEGRDALDDLEIKMEKITPSGALNRFGVRFDNMPLGVDRIDYNLLGTVQKIKYTVNKETSTVTLEKSGTYDNVNLSESIDSFIINNGKDFVGKNVESFTLDQYVGKRDLIDSEETKYNNKAPLLYTAEAEADETIKMRYTWEVPDSLTALNYKMKFTMDLFNTHDNTNVYVNGTKGQGQAIDSNTISGFLNDLSNNDQFVVIKTKNGTDIAKSYSAEIRFPKKKTENDFSLIEAGVLKAEYANDSSVKAYIGKKFTETAKTDADGNRYVEYKGTITIDPKARMVCLRPKVVSGVNVEYELYNNYTVNGITKAAKAYELINGQAYIDFNLGDENELELQIKDASTQKLLAKYIYTVKQRDDAEKAFNENFIFDDNNSNTYLTREGSKEKISFKVGKSENRSTFDLYTKDKNEVKITLDPDGITNSNEYFKVWTSDTLDGNNFTEAQASIDNEFDINSGIRDTDLYVDISKAKRIMVQAYYDEVTEKDGVYTLVKSYSLGSKYIFFIPANINSSDTDDNQKSDNAVLSNIKVKGQTLYNLDEDKNGFSIDSRNYRVTVPKDQTTAVLTVVPEDENVKSIVATVSGTDTSYELYPGEETEFMLNSSGITDLEITVTAQNGKKTEVYNLSIINNSKGGSSKLKDLILSSGDFKFDSDVYTTKVQVEQSVNKISITPIAEDSKAKITINGQKFTGKPISVSLAGKQTTEVDIEVESEDGESTTTYTLKIKRVSVISDDDSDNNQGTTEDIYYDYDNDCWVDTTKYDEWGTIKNRVMYFDKRGRQVKDRWIYTGKKWYYLNEAGYRATGWKIDDETGQRYYMDNVTGEMKMGWMNLNGSWYYLGTTGVMHTGWLWLNNNWYYFTENGEMITNQSMVIDGKMYRFATDGRIY
>NZ_CP030775.1|WP_058229321.1|437394_438387_+|hypothetical-protein
MIERDWEFEKIKKYKENVLRENIYNKENVKKYKECPYCGSKSFIKYGNYNRIQRYKCKNEECKKTFSNTTNSVWKYLKHKPEKWFEFIELMGEHTTLNECAAKLEISIVTAFYWRHKIFHAIENNYKPEKFDEVVYVDTYYTEKCYKGSRNKNYTYADKVKNKFDKMYGLVPRNVSVLIAEERGKMPLIRRTENDETIINNFNNNVLKIAAKDCYMRTDYFTNKKLKNNLLQYNKKLSNATKKKYGLKIIGNRIEDKIKEDKKKNIMAYLTAWLSRCKGIATKYINHYYNFYSLIDSEKVFDYMSIFFDLLKNGSYTSVEVLRTNHIEDY
>NZ_CP030775.1|WP_003423843.1|438995_440846_+|phosphotransferase
MLEDRLEILKILNENFNINQRELSKRTNMSLGKVNSVLKEFTEDNFIDRIVNNRGILYKVTDKGMKFLEESIANAKNTRLKLHEEEKKIVKQAVILAAGRAEHFGKPVGLLEIEDFKLIDRTLNILKENGITKIVLVTGYESEQFEEYFKNSRNIKIVKSDIYKWTGTMHSLSLAKEYIDDDFLLIENDLIFEKRAIKELSESPNRDCILFTNESGSGDEAFVEIRDNHLYKMSKDIHQFNRIDGEMIGLTKVSYKLYEMMLEEFKGNVNPYLNYEYVLLDVARNYNIGFVKIDDLAWGDADSIKEYEKIKNYLYPTIRRRELNYEINNIKSIVCEAFKVEDEDITEVTPAGGMTNKNYRICVKGTRYILRVAGTGTEQMINRNTEMFNSAIASEKGFNVEVPYFNLETGVKISKFIENAETLTHRSVKKEENLRQVTKILRDLHESEDFRMDNEFNMFRELEKYEEILRKDEGQFFDDYAEVREKVMALEEELQRCDRVFVPSHNDLVSENLVKDTEGRIYLIDWEYSGINDDMWDLAALSLENEFSEDDIELMFRLYFNGEEPDENSRRRLLIHQICQDTLWAVWTLIKEAEGDDFGTYGIDRYNRAKEYLKKL
>NZ_CP030775.1|WP_113886048.1|441037_441736_+|NTP-transferase-domain-containing-protein
MRAILMAAGMGTRLRPLTENTPKSLIEVNGMPLLERQIINLREIGVEEIIVLTGYLHEKFDDIVKKYNLIKVVNDKYDVYNNIYTMYLVRDYLKDAFVIDADNYITRNFLPKVQPKTSAYYSACKENITGEWILKYTETGRIYDVEIAPKNSKANYIMSGASYWTEKDGKIISEKVKKAVEEDKLFDIYWDNIAVENYDNMNVYIEKINSDDIFEIDTLEDLDYLKSKLNNM

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Crispr_ID: NZ_CP030775_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030775_4

423755-423843

Orphan

Consensus_repeat	Method
TAACTACAAATGTAATAATATTAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030775_4

>merge|NZ_CP030775|4|423755-423843|CRISPRCasFinder
TAACTACAAATGTAATAATATTAACAAAGCAAAATTTTGAATTAAAAGACCATAATTACTAGATAACTACAAATGTAATAATATTAACA

>NZ_CP030775|4|4|423755-423843|CRISPRCasFinder
TAACTACAAATGTAATAATATTAACA	AAGCAAAATTTTGAATTAAAAGACCATAATTACTAGA
TAACTACAAATGTAATAATATTAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030775.1\|WP_113886046.1\|420639_423645_+\|Ig-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886043.1\|414052_416290_+\|cadherin-like-beta-sandwich-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886040.1\|408548_410066_+\|cadherin-like-beta-sandwich-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886038.1\|404679_405699_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886039.1\|406329_408111_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886037.1\|403263_404673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_002582347.1\|425950_427546_+\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP030775.1\|WP_027636894.1\|433037_433436_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113886049.1\|442036_442738_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113886047.1\|430682_432695_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP030775.1\|WP_113886042.1\|412554_413532_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380481
NZ_CP030775.1\|WP_113886475.1\|427888_430129_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP030775.1\|WP_058229321.1\|437394_438387_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226202
NZ_CP030775.1\|WP_113886044.1\|416766_417759_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|226202
NZ_CP030775.1\|WP_002582348.1\|423856_424906_+\|InlB-B-repeat-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886048.1\|441037_441736_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|227093
NZ_CP030775.1\|WP_113886045.1\|418349_419993_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_003423843.1\|438995_440846_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|270700
NZ_CP030775.1\|WP_103673591.1\|433836_436908_+\|cadherin-like-beta-sandwich-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_113886041.1\|410533_412540_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910

Protein	Function_ID	Function_description	E-value
NZ_CP030775.1\|WP_113886046.1\|420639_423645_+\|Ig-like-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	6.82467e-25
NZ_CP030775.1\|WP_113886043.1\|414052_416290_+\|cadherin-like-beta-sandwich-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	5.69542e-35
NZ_CP030775.1\|WP_113886040.1\|408548_410066_+\|cadherin-like-beta-sandwich-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	7.41107e-39
NZ_CP030775.1\|WP_113886038.1\|404679_405699_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	2.42705e-34
NZ_CP030775.1\|WP_113886039.1\|406329_408111_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.08057e-34
NZ_CP030775.1\|WP_058229321.1\|437394_438387_+\|hypothetical-protein	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.3738e-08
NZ_CP030775.1\|WP_002582347.1\|425950_427546_+\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP030775.1\|WP_113886047.1\|430682_432695_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	2.0021e-68
NZ_CP030775.1\|WP_113886042.1\|412554_413532_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|380481	cd01539, PBP1_GGBP, periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. GGBP is a member of the pentose/hexose sugar-binding protein family of the type 1 periplasmic binding protein superfamily which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic GGBP is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.	1.85938e-60
NZ_CP030775.1\|WP_113886475.1\|427888_430129_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.14797e-60
NZ_CP030775.1\|WP_113886044.1\|416766_417759_+\|IS1-family-transposase	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.82679e-09
NZ_CP030775.1\|WP_002582348.1\|423856_424906_+\|InlB-B-repeat-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.57954e-16
NZ_CP030775.1\|WP_113886048.1\|441037_441736_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|227093	COG4750, LicC, CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane].	3.83192e-71
NZ_CP030775.1\|WP_113886045.1\|418349_419993_+\|N-acetylmuramoyl-L-alanine-amidase-family-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	6.83936e-40
NZ_CP030775.1\|WP_003423843.1\|438995_440846_+\|phosphotransferase	gnl\|CDD\|270700	cd05151, ChoK-like, Choline Kinase and similar proteins. This subfamily is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate and displays negligible activity towards N-methylated derivatives of Etn. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.58556e-49
NZ_CP030775.1\|WP_103673591.1\|433836_436908_+\|cadherin-like-beta-sandwich-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	2.73428e-19
NZ_CP030775.1\|WP_113886041.1\|410533_412540_+\|HAMP-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.47793e-48

>NZ_CP030775.1|WP_113886046.1|420639_423645_+|Ig-like-domain-containing-protein
MKRDLIKKLICCMAITACISSTMPVDVYAATWMNDNMGNYYFYESNTYAVGWRNIDGTVYYFDASGVMQKGWIKYGDSWYYLDNNGALKTGWINYNGEWYYSNSAGIMQTGILLIDGQTYYFGNNGVMKKGNVIINGQFYTIGVNGAIVSNAVPVPDKVFDRNNNCIKQINSVDSTTIMTPDGSKYDNPIVDQSEDGDYEEPARKFTVTFRDENGQELKTKNITDGDTVKMYEPDDENGKGDEDRNFIEWNTKRDGSGKSYDSDEKVKVTKDLTLYARWEELEEQTLVSSISITGSNEVEIGKTTQLTAEVKPSDATNTKVKWSIVDNEDGTASGKASIDQNGVLTGLENGLGKITVKAEAMDKSDVSTTKVITVVEAKNLIESIKINGPDTISEDGAVVKLTADVSPETASNTNVSWKITDGSEYAEIDRDTGELKALADGKVTVMASAKDGSGISATKTINITGQSVKATKIQVSGYENVKTVSTGKKLQMVARIYPDNVASANDEVEWSAVYTSGEKIGEQVSINEGTIGVIGDAAGQRLKYAVLNPEYRGKVEVTARSKSDSSILGKTTITVVKDAESVDIKAIDTSGNDITNKPEITTNAGKLNLKAVLNPSDTTDTSSVKWSMELVNGDGEDTEVSNYATLTPSETSAVIAAKKNGEIKVIATANDSSKAIGEITIKIDGQKIYAKEISLYQDGDESKPVKEGYEFNIQKGASITVEGKVGPDNATNKNIEWSVLGAKDYVTSKIDGNKLTITANKDLSSEMAAVRIKAVADNIIKEFKINVYENIQGVNISTPSAVVLGQDFKATSTLFPVNVNGDKIKLSVVTKMDDGSLTGSAFINGEVEVSRNTTTATITPVNTGTIKLKAVATLNDSEQTYTTGEINILNPIDNIIIEGTNNSFTLENGQTRNANLTAKVNGAPAGGYSSFLKWEIKSQPSNVIAKVDGNTGIVSVTRTGDIAVGSQVIVRVSANYDSTKYSEFIIGVSNAPVVDSTATS
>NZ_CP030775.1|WP_113886045.1|418349_419993_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MIKRLKKTSALIVLATTLATIVPVGNMQIRAEAADKYSNEFSNNYNIESLENNISLASEETAEDKQIAGKITQYINGKYPGATVKVQSPKYIKLTITKSIAEKMATQICSSNDTIRQILKNEPNLVKPGASQEEVNKIVDSMTDEQIESVKPKVYNAVYQTILAFNGQSVPIYGYEVMNGDQIEDAGYFVGGKIGALIMQKDGKPLCISVDQIKDFNEQIKNKILEDIKEKISEIIQNSGITEIIDKVLKKVNSVVSDVTDTIEDLSDAIDDLTDSIKDKADDIDDAWDKVFDRFDNDEGWGKKDGYMYYYDKDGISLKGVQKIDGKTYYFNRIDGAMETGWQIVDGKRCYFDEKKGYQLFLQWVQDGEDWYFLSDQGPVKKSEWVNDNGRKYYLKSDGKMTKDWLKIDDDWYYFNGSTGVMEYSTWKYSNDKWYYLNQDGKAANDWTYINENWYYFRENSCSMETGWFRADGSWYYSDSTGAMKTGWIQGDDGWYYLDDTSGKMKKNEWVYSNGSWYYFNINGAMVTKARYIDGVKYNFNSDGRMA
>NZ_CP030775.1|WP_113886044.1|416766_417759_+|IS1-family-transposase
MIERDWEFEKIKKYKENALRENIYNKGNVKKYKECPYCGSKSFIKYGKYNGIQRYKCKNEECKKTFSNTTNSVWKYLKHKPEKWFEFIELMGEHTTLNECAAKLEISIVTAFYWRHKIFHAIENNYKPEKFDQVVDVDTYYTEKCYKGSRNKNYTYADKVKNKFDKMYGLVPRSVSVLIAEESGKMPLIRRTENDETIVNNFNNNVLKIAAKDCYMRTDYFTNKKLKNNLLQYNKKLSNETKKKYGLKIIGNRIEDKIKKDKKKNIMAYLTAWLSRYKGIATKYINHYYNFYSLIDSEKVFDYMSIFFDLLKNGSYTSVEVLRTNHVEDY
>NZ_CP030775.1|WP_113886043.1|414052_416290_+|cadherin-like-beta-sandwich-domain-containing-protein
MRAKFNFKRVFAYLLIFAMTFSFVQMGQANPVKAATSGSKEVNDSFKFIIGDASSGTTKDVDMDYSGDLVLRSVTLSQTYTIMPQAGYNIESVKSSSDKMKITKAVSGTTNTFTIGTIKDYSNFKLTVKVKNSSGEINTYDIRVEFNIDSSLEFNKLRITVDNDDPVTLTYTQCDSEGIYYYEESNPEAKKAKIEMFDDSNNAMSFKVNGGTNKIVNLVGGDNTIELTVTSAGYSKVYTLVITKKGVAKLKSLVPSTGSLSPSFNSDTTEYTVTVPTTQETIAFTPTAVDNSSTIKVKKITVASGKKSQDIKLDEGENEIPIVVTNKDGDVTTYKVTVTRTEKFRSANLKSLKLTSGTLSPTFNKGVYQYTTIVENTVSSVGVTPVAEDTNATIEVNGKEIPSGATSPYINLDEGGNVINVTVTDSKGNDNTYVIMITRKYSKNNVNLSSLSVTDGTFSPKFDPEIYAYSVKVPRNIEEVRIKFETQNEKSKVTINGVEYKSGQQSDKIKLDLGANTVVVKVVSEDNKSTVNYTLSIIRDKVQGTLNDWVLVGGEWMYYDGDGIPAKNRWVKYDNQWYHVDVNGYMNKDGWLFDGGKWYYLDPNGIMLYGWIKDTGFWYYLRESGEMVEDSWTMLDGNWYFFNQYGQMQTGWTLYKGKWYYLDDHGVMQKGWITYDKNKYYLDDDGTMRTGWLYNGKVWYYFESSGRMVTGWQTIGNRSYYFDSKGAMKTGMLFLDGRWINLDSL
>NZ_CP030775.1|WP_113886042.1|412554_413532_+|substrate-binding-domain-containing-protein
MKKLLSLLMVFVLMFTALGCSKNGSKGTSIGNTKVFASIADDDKFKQTIVSGMESYADENNVDLDVAIADNNVERQVQQIKDAKTNGYDVIVCILVESDTAQQIINAAGDIPVIFTNVEPDSGRLKSDKYIYVGSDENEAAKYTFESLKEYFKDKKSFNAVLFEGSMDSKSASVRTESLKSQLKKNGFDVNYVFQDDAGWGREKAKKMFEAFLKLNESYDCIISNNDDMALGVIDAMEENGIDPSKVPILGLDATPEACKAISNGKMSFSIKQSGEGQGESVIKAAQALKNGDKISEIENGDSSGKYIWYPYSKVDKSNVQQYMR
>NZ_CP030775.1|WP_113886041.1|410533_412540_+|HAMP-domain-containing-protein
MWHAKINKKGDKYIPIKYKILSVILPVIILAIGGLITVSYNKSSKIIEENSYSMLESSVKNQTIQIENWLENNLQTFNTIKKSLGSTQYSQEELKKILNQYYNFNSNFLDGLYISDLQGNVISADNSQMKFENATSSQWFKEGLTHIKMRYGEAHDDYAGNKVISATGLIVDNDNNPVGVIGADVTLNRISIIVNSLIEMDDAQSFLVNKDTGMVLASSDSLEPYTILGENNENLLYSKIAQSIESGQYSAQEIENNIVDMHDVKNTRWILVSYVPKSSILSSMFTLRNYMVIIAIVALAVLVLITHRTINYIINPVNDISKKIVKMAEGDFSIDIDVKSNDEIAVMSQSLKNFIESMKVMLNDIKDISMEQKNQSFESKNISEHLFDSSKQQAESMNNLNIVVGEMAEATNQIADTATSLAGIACETNDNGNKVKDKMIETVKMSEVGKKDMEHVEISIRTIETSIKELKDVIDEVGKSSEEINSIVSIIGEIAESTNLLALNASIEAARAGEAGKGFSVVASEIGTLANNSASSVNDIAKLINNINKLISNVVSKVNESVNHVNESSELITDSVRKFDNIYNTINESDKLVADMLKKVEEVGKAADNMAAISEEQAASSEEISSTSQDMLEHSQNITESSYNVAKGADVLSDIAKQLESEVEKFKL
>NZ_CP030775.1|WP_113886040.1|408548_410066_+|cadherin-like-beta-sandwich-domain-containing-protein
MRKLREGIAATVLALYSLIGIEMLSGSLTCVEAYAKNIEDKPYLKDIYVGLGYDIEFIKDKYEYIVDVDKDVEDIYVKTRPENENDIIKINGKVITKDDKFKKDLSLEMGKNKVVIEVIKNNDNNEEEYTDNDDDFSDDDVQNDKDKYGSAQDKTVYTLYIYRGGADEVYLKNITLDKSNIGYFVNKKNYNIESDENGQLVRLEVETFGDEYSVFVNGNKLDFTNSLSLKFKGIGKYTITLDVVDDETKRKSTYVLNIYRGIPVTPNVSDSINSVLKPNQWVIVNGRWRYNDAIGQPLKNTWFFDMNYNSYFYFNGRGNMKTGWINEGGNTYYLGNDGMMRTGWVEYEGKWYYLDMNGVMRTDWVKNNGEWYYLDQDGSMKTGWIVDKENWYYLNNDGSMETGWILDYKKWYYLSQNGAMKTGWAQYKDDWYYLNNDGSMKSGEWVEYKNKWYYINYSGTMRCGWLYKDDKYYYFNEDGSMRTEPIVLDGYLYNFNEDGSVNFND
>NZ_CP030775.1|WP_113886039.1|406329_408111_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MIKRMNKLTALMVAATAVASIVPAVSASAAAKLEVQEGNIDAAVAYGDGKYVYDGYLTDDDESGLYFNNGTKDSFLENDEDYEFGSEKYGTKYTIVENDGEDYLLDLSSGKVLDDESIEDLRNNVELKLRTTLKKADDRYATVNNKIVFENNDEIAQVLGNQFGDVWYSYGVKSADSDKTLYGFANESGKYIDASALANMTVSTTDSAVRVTEFDKEKNDAMVSLAEAPKVIAQDSSYLYAITKVNVTIAGEADGTRTYIQKISKAQGDTKDGAYMPKSVDSYEISSNFYIDKDNDDTAKAEELLLDENNMVRVIKDTIYVTTVSEDGKVYVNTIKLKKEKVTKNDGTKKLDVYVAVKDQDDDEKIEGGANAVSIDAEGNTWAVNKGKIYKFNGTEFVEVYTCDRTIDHLDVYDENNLIAWNKDNEVFATVQTKSEEGTDEGDKEETKAGWVTNADGTWSYNKADGTKTTGWLLDGSTWYYFNANGVMQTGWVNVNGTWYYLNPVSNGYKGAMQTGWLNDNGTWYYLQSNGAMKTGWLNDNGTWYYLNSNGSMKTGWLLDTDGNWYYLQSNGAMAKNTTIDGYKLGSNGAWIR
>NZ_CP030775.1|WP_113886038.1|404679_405699_+|N-acetylmuramoyl-L-alanine-amidase-family-protein
MKSLNLKKLVAMALTLVTVTAVSPVAASAAWKQDAKGWWNTEGNSWSIGWRQIDGTWYHFDETGYMSTGWINDNGTWYYAAQSGAMQTGWVIDYSAGYGQWYFTDQSGAMKTGWMQDAGKWYFLQPSGAMKTGWINDNGTWYFAEGSGAMLTGVIKVDGQTYYLQSNGAMATGEVEINGVKYTFGTNGACIGDAPKADKVFGTTDSGNNSGSSNTDKDTDSDSGSSGGSSHGGGGSSSSTPAAIKDYSTSANITVENVSDKEADVDTYKIAFKNTLTKSKDGDYVVRDLYVTNEDAIISEEDGGYLVEVKKGSTLDAKGVIRVVRDGKVYYATGIAITK
>NZ_CP030775.1|WP_113886037.1|403263_404673_+|hypothetical-protein
MNNSKKIANIILSIILVVTIILTVLSSIIRFSATNKGIYLRLLEDSNTYSNVEQALSNKMVAILGNDISENLKESIITEQDIRKEADTVLDCIISDLIKGEANIPEIDTTIYKERVAKALNTLTGFEATIKNDKNLTSSIQSNDMCLTPINTVNSNEKLIGENMFNINNLNENRSNDLTLVNMASRAELEAQGRSMLKEKGLTEEEARRKAAERGISEQDVWNYLEENGYLDEESQSEESSDSGVQKDEVSDKSTDSSNSSNSTDSNETINNNVQADKSNANNDNKNNETKVSKKRIQEIVTSVLMDGNKNFDEKVNEISSKLMEEAEKIINAEMEKLNFSKVINSNEFNAAIKITSALYNNFYVLLLLIVIMCVLIFFVNKESVVNGLVIIGNSVLAAGVIMSLIFGYVYMSKVYTHIDINLNKAYFEPMFLQCAEYFSKLLCAISIIILFLGLIINIFMMKIKLTRR
>NZ_CP030775.1|WP_002582348.1|423856_424906_+|InlB-B-repeat-containing-protein
MRNKFLNKLIAVSIALTAVTVMIPMKTEAAWINNYYGGFAYSNGYYLSTGWNMINGTWYYFNSLGVMQTGWLNSNGTWYYLDQSGAMQTGVIQVEGKIYLLGPSGGMQTGSNIINGKMYYFGPDGVCMGTDVPTPLKGYDYYGNPVQPYVPSQISNPNAVMDSNIPLENGQKIEEQYRVYYKDDDGDLILTKRIDADTKITLYEPDKAGYEFIEWNTKKNGNGTSYDAGDKVKLTGDLTLYAQWDEVETDDDSDEDTIKVTGITLGAVGYTGTTINISVGDTVQFTRKIAPSTATNTKVTWSVKNGSTGKAEITSTGKLTALQPGTVTVRATATDGSKVFKEMTVIIEN
>NZ_CP030775.1|WP_002582347.1|425950_427546_+|peptide-chain-release-factor-3
MADYIKEIEKRRTFAIISHPDAGKTTLTEKFLLYGGAIRLAGSVKARKASKHAVSDWMEIEKQRGISVTSSVMQFNYNDHCINILDTPGHQDFSEDTYRTLMAADSAVMVVDAAKGIEDQTRKLFQVASLREMPIFTFVNKMDREARDPFQLLDDIENELGIKTYPMNWPIGSGKEFKGVYERDNNRIIAFNGGNHGQNEVEAIEGTPDDPKFREILGEALHDKLMEDIELLDIAGDELDLEAVRNGELTPVFFGSALTNFGVEPFLEHFLEMTTAPLARHSSVGDIDPFEDKFSAFVFKIQANMNKAHRDRIAFMRICSGKFNKGEDVYHMQGGKKIKLAQPQQFMAQDREIVEEAYAGDIIGVFDPGIFSIGDTLCAASKKFKFEGIPTFAPEHFARVRPVDTMKRKQFVKGCTQIAQEGAIQVFKEIHIGMEEIIVGVVGVLQFEVLEYRLKNEYNVDIKMDRLDYRYVRWIEDQSIDMDSLNLTSDTKKVKDMKDRNLLIFQNDWGISWALDHNKDLVLSAVGKNDD
>NZ_CP030775.1|WP_113886475.1|427888_430129_+|N-acetylmuramoyl-L-alanine-amidase
MILGLVPTLSVQAATTDFKIISKTEVTAAQAKKWAQSKGATDTFADLAKLYWKYAEECGGVNPGIAYVQAAKETGYGRFGGVLDESYNNPCGMKTSSGGGDYDKEAHQRFNSWDEGVQAHMDHLALYAGADGYPKANTYDPRHFVTIKGRATTTNSLGGKWAPSATYGEEIGKLYMSLMDSAGVTFEKDEDEDLWEDVEDEEDTSAAPNPGTVEKKPADLSIEEAIKLPEKITNDTSGTDSSQGSGNDSPNITSTIGWKNVDGNWYYYKSDETKAFGWIKPDSNWYYLDDADGKMVRGWLKNNNKWYYLDESGAMITGWKLIDSKWYLFDKNGIMTTGVQNDGNSSYYLDKSGAMIEEQGWKKIEDKWIYLEKGGKIKLGWLKENNAWYYLQGDGSMVNGLKRIDGQVYSFYDNGTMQTGWKSVNSNWYYFKSSGEMATGWTYDGDTCYYLYDNGAMAKGWITIGDSWYLLSSSGVMQTGWVTSNGDTYYLDKSTGRMVTNTTVDGYKIGKDGKRKGKVNQGDSNSNNSNSNNSNSNNSQTGPGSAGKVIYVDAGHDYGKDSGAVATINGVTYSETDLNMQVADKLKTSLENRGYTVIMTRNLGERPSFSSLTESLSYRVNKANNANADLFISIHHNSAGETAKGIETLYSEVSQDAAFGGQYDSTRIAKSKSLASEINNNIASSLDLTNRGGKSQNLYVCRNTKMPAVLVEVGFITNAEEAVRCSDPSSQQKVAEAIAAVVSKYY
>NZ_CP030775.1|WP_113886047.1|430682_432695_+|N-acetylmuramoyl-L-alanine-amidase
MKIRERLASFFIALFVAFSFIPSMKVMADTVADINIISDTKVTVAQAEKWAKSKGATDTFISLAKLYFKYADECGNVNPGIAYVQAAKETGYGKFGGVLDESYHNPCGMKTSSGGGDYDPNAHQKFNSWDEGVQAHLDHLALYAGADGYPKSDTFDPRHFVTIKGKAPTVNSLGGKWAPSTVYGEEVNSLYRDLLKSAGVTIGSEEIPNEDNSGNNSGSNSGSGSNSNGSNNSGTPGGSTNVQPPKDTVEPQGLPVNKPIAITADNSTNISSNIGWKLEGGRWYYYRSDGSKATGWIKPDANWYYLYSDGVMANGWVQLGSSWYYLQSSGAMKLGWFKDGSKWYYLQGNGAMVTGFNSIDGKTYFLDSSGAMRTSWFKISGQWYYFNTDGSMLTGWIRPDGNWYYLFSNGIMASGWLARDGELYCLSESGVMQTGWVYEKGGYYYFHPTSGKMLRDTVVDGWEIGPDGKRGDRVGGGSSKLIVIDPGHNFGGDDGAYGYHSGVTYSERDLNMQVALKLKTKLEAYGYQVVMTRNESDRETLSVSESLAKRVNLANSLNADFFVSLHHNSAGSESANGVETYYSSNASNSNNISISRNMATKINNAIVGKTGQYNRGAKDGNLYVCRNTNMPSVLVELGFVSNPTEAAKCATWTNQDLAASAIAEAIASSI
>NZ_CP030775.1|WP_027636894.1|433037_433436_+|hypothetical-protein
MNWFRKFMYGRYGVDELSMVLVGVSIALLLLSSLLPRSLSILSLIAYIPMVIYIFRIFSKNIFKRQQENYKYISFKNSMLSKAKKYKGKIQGAKTHKYFKCPSCGQELRVPKGNGKITITCPKCKTSFKAKS
>NZ_CP030775.1|WP_103673591.1|433836_436908_+|cadherin-like-beta-sandwich-domain-containing-protein
MKKIVKRLLALLIVFASMFSFLPLQFGDNGQEANAANDSSVDISYADLSLRVVGGTSILDKKTDDTVGKLPYYNTSDGENTFDLTISDFSKTENQIKEELLKKYPEGGSGETTYVSNAYMNIISLNNIKLATRSGAEIPEGRDALDDLEIKMEKITPSGALNRFGVRFDNMPLGVDRIDYNLLGTVQKIKYTVNKETSTVTLEKSGTYDNVNLSESIDSFIINNGKDFVGKNVESFTLDQYVGKRDLIDSEETKYNNKAPLLYTAEAEADETIKMRYTWEVPDSLTALNYKMKFTMDLFNTHDNTNVYVNGTKGQGQAIDSNTISGFLNDLSNNDQFVVIKTKNGTDIAKSYSAEIRFPKKKTENDFSLIEAGVLKAEYANDSSVKAYIGKKFTETAKTDADGNRYVEYKGTITIDPKARMVCLRPKVVSGVNVEYELYNNYTVNGITKAAKAYELINGQAYIDFNLGDENELELQIKDASTQKLLAKYIYTVKQRDDAEKAFNENFIFDDNNSNTYLTREGSKEKISFKVGKSENRSTFDLYTKDKNEVKITLDPDGITNSNEYFKVWTSDTLDGNNFTEAQASIDNEFDINSGIRDTDLYVDISKAKRIMVQAYYDEVTEKDGVYTLVKSYSLGSKYIFFIPANINSSDTDDNQKSDNAVLSNIKVKGQTLYNLDEDKNGFSIDSRNYRVTVPKDQTTAVLTVVPEDENVKSIVATVSGTDTSYELYPGEETEFMLNSSGITDLEITVTAQNGKKTEVYNLSIINNSKGGSSKLKDLILSSGDFKFDSDVYTTKVQVEQSVNKISITPIAEDSKAKITINGQKFTGKPISVSLAGKQTTEVDIEVESEDGESTTTYTLKIKRVSVISDDDSDNNQGTTEDIYYDYDNDCWVDTTKYDEWGTIKNRVMYFDKRGRQVKDRWIYTGKKWYYLNEAGYRATGWKIDDETGQRYYMDNVTGEMKMGWMNLNGSWYYLGTTGVMHTGWLWLNNNWYYFTENGEMITNQSMVIDGKMYRFATDGRIY
>NZ_CP030775.1|WP_058229321.1|437394_438387_+|hypothetical-protein
MIERDWEFEKIKKYKENVLRENIYNKENVKKYKECPYCGSKSFIKYGNYNRIQRYKCKNEECKKTFSNTTNSVWKYLKHKPEKWFEFIELMGEHTTLNECAAKLEISIVTAFYWRHKIFHAIENNYKPEKFDEVVYVDTYYTEKCYKGSRNKNYTYADKVKNKFDKMYGLVPRNVSVLIAEERGKMPLIRRTENDETIINNFNNNVLKIAAKDCYMRTDYFTNKKLKNNLLQYNKKLSNATKKKYGLKIIGNRIEDKIKEDKKKNIMAYLTAWLSRCKGIATKYINHYYNFYSLIDSEKVFDYMSIFFDLLKNGSYTSVEVLRTNHIEDY
>NZ_CP030775.1|WP_003423843.1|438995_440846_+|phosphotransferase
MLEDRLEILKILNENFNINQRELSKRTNMSLGKVNSVLKEFTEDNFIDRIVNNRGILYKVTDKGMKFLEESIANAKNTRLKLHEEEKKIVKQAVILAAGRAEHFGKPVGLLEIEDFKLIDRTLNILKENGITKIVLVTGYESEQFEEYFKNSRNIKIVKSDIYKWTGTMHSLSLAKEYIDDDFLLIENDLIFEKRAIKELSESPNRDCILFTNESGSGDEAFVEIRDNHLYKMSKDIHQFNRIDGEMIGLTKVSYKLYEMMLEEFKGNVNPYLNYEYVLLDVARNYNIGFVKIDDLAWGDADSIKEYEKIKNYLYPTIRRRELNYEINNIKSIVCEAFKVEDEDITEVTPAGGMTNKNYRICVKGTRYILRVAGTGTEQMINRNTEMFNSAIASEKGFNVEVPYFNLETGVKISKFIENAETLTHRSVKKEENLRQVTKILRDLHESEDFRMDNEFNMFRELEKYEEILRKDEGQFFDDYAEVREKVMALEEELQRCDRVFVPSHNDLVSENLVKDTEGRIYLIDWEYSGINDDMWDLAALSLENEFSEDDIELMFRLYFNGEEPDENSRRRLLIHQICQDTLWAVWTLIKEAEGDDFGTYGIDRYNRAKEYLKKL
>NZ_CP030775.1|WP_113886048.1|441037_441736_+|NTP-transferase-domain-containing-protein
MRAILMAAGMGTRLRPLTENTPKSLIEVNGMPLLERQIINLREIGVEEIIVLTGYLHEKFDDIVKKYNLIKVVNDKYDVYNNIYTMYLVRDYLKDAFVIDADNYITRNFLPKVQPKTSAYYSACKENITGEWILKYTETGRIYDVEIAPKNSKANYIMSGASYWTEKDGKIISEKVKKAVEEDKLFDIYWDNIAVENYDNMNVYIEKINSDDIFEIDTLEDLDYLKSKLNNM
>NZ_CP030775.1|WP_113886049.1|442036_442738_-|hypothetical-protein
MNVTIIYDNLKDDNSYDHINFLLNNLKLNTPINCTEYFLPTDFSLHCKHYCQCIIGNCDYFNFCSVNKIAKSISDSDLIILVCSSLRKCFLPPSLKLLIEHLSYIWMPHKNHIPMADKIGLVISNDYVPLLPSTGRTLKKHLKFWGIKNILKFTSHDSHKIIPNTNLLSKDYINLLALSIKIMNIYSSNHTTSLHSGNIIKFPYSQLISNKKFLSNNNPTDNVIPLKKIQNDL

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Crispr_ID: NZ_CP030775_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030775_5

477119-477204

Orphan

Consensus_repeat	Method
TTTAAATATTATCTTGGGAAAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030775_5

>merge|NZ_CP030775|5|477119-477204|CRISPRCasFinder
TTTAAATATTATCTTGGGAAAGAAATAATCTAAGAAGAATAATAATGAATTTTTAGATTAATATTTAAATATTATCTTGGGAAAGA

>NZ_CP030775|5|5|477119-477204|CRISPRCasFinder
TTTAAATATTATCTTGGGAAAGA	AATAATCTAAGAAGAATAATAATGAATTTTTAGATTAATA
TTTAAATATTATCTTGGGAAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030775.1\|WP_003424004.1\|474405_475533_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050
NZ_CP030775.1\|WP_003424020.1\|484663_485491_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP030775.1\|WP_002579046.1\|464258_466361_+\|Cache-3/Cache-2-fusion-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP030775.1\|WP_046057278.1\|488818_490162_+\|glucosylceramidase	unknown	unknown	gnl\|CDD\|307945
NZ_CP030775.1\|WP_043852473.1\|470186_470513_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113886061.1\|479511_479907_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_113886059.1\|475532_477116_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|270327
NZ_CP030775.1\|WP_113886060.1\|477301_479062_-\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|237053
NZ_CP030775.1\|WP_003424001.1\|473632_474262_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223564
NZ_CP030775.1\|WP_113886057.1\|466454_467948_-\|leucine-rich-repeat-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_002579048.1\|468389_469802_+\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP030775.1\|WP_002579051.1\|472195_472534_+\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|223424
NZ_CP030775.1\|WP_113886063.1\|485660_488801_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_003424023.1\|490413_491427_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP030775.1\|WP_070780380.1\|472773_473496_+\|MEDS-domain-containing-protein	unknown	unknown	gnl\|CDD\|379605
NZ_CP030775.1\|WP_045143733.1\|482220_483555_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP030775.1\|WP_113886058.1\|470573_472151_+\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_CP030775.1\|WP_043853483.1\|483713_484664_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP030775.1\|WP_113886062.1\|480324_481752_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|181973
NZ_CP030775.1\|WP_002579058.1\|479908_480244_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP030775.1\|WP_003424004.1\|474405_475533_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	6.21438e-146
NZ_CP030775.1\|WP_003424020.1\|484663_485491_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.66325e-65
NZ_CP030775.1\|WP_002579046.1\|464258_466361_+\|Cache-3/Cache-2-fusion-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	2.58226e-61
NZ_CP030775.1\|WP_046057278.1\|488818_490162_+\|glucosylceramidase	gnl\|CDD\|307945	pfam02055, Glyco_hydro_30, Glycosyl hydrolase family 30 TIM-barrel domain.	1.74965e-86
NZ_CP030775.1\|WP_113886059.1\|475532_477116_+\|ABC-transporter-permease-subunit	gnl\|CDD\|270327	cd13609, PBP2_Opu_like_1, Substrate-binding domain of putative ABC-type osmoprotectant uptake system; the type 2 periplasmic-binding protein fold. This group includes the periplasmic substrate-binding component of a putative ABC transport system that is predicted to be involved in uptake of osmoprotectants (also termed compatible solutes) such as betaine, choline, proline betaine, carnitine, and L-proline. The relative substrate preference of this group is not known. To counteract the efflux of water, many microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	9.14813e-156
NZ_CP030775.1\|WP_113886060.1\|477301_479062_-\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|237053	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_CP030775.1\|WP_003424001.1\|473632_474262_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|223564	COG0490, COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism].	6.48455e-21
NZ_CP030775.1\|WP_113886057.1\|466454_467948_-\|leucine-rich-repeat-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	2.61234e-37
NZ_CP030775.1\|WP_002579048.1\|468389_469802_+\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	0
NZ_CP030775.1\|WP_002579051.1\|472195_472534_+\|P-II-family-nitrogen-regulator	gnl\|CDD\|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	1.17872e-38
NZ_CP030775.1\|WP_003424023.1\|490413_491427_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	4.48781e-105
NZ_CP030775.1\|WP_070780380.1\|472773_473496_+\|MEDS-domain-containing-protein	gnl\|CDD\|379605	pfam14417, MEDS, MEDS: MEthanogen/methylotroph, DcmR Sensory domain. MEDS is prototyped by DcmR and is likely to function with the PocR domain in certain organisms in sensing hydrocarbon derivatives. The MEDS domain occurs fused to Histidine Kinase and as stand-alone version. Sequence analysis shows that it is a catalytically inactive version of the P-loop NTPase domain of the RecA superfamily.	7.96443e-22
NZ_CP030775.1\|WP_045143733.1\|482220_483555_+\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.31062e-21
NZ_CP030775.1\|WP_113886058.1\|470573_472151_+\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	4.1247e-117
NZ_CP030775.1\|WP_043853483.1\|483713_484664_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	9.08847e-72
NZ_CP030775.1\|WP_113886062.1\|480324_481752_+\|6-phospho-beta-glucosidase	gnl\|CDD\|181973	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed.	0

>NZ_CP030775.1|WP_113886059.1|475532_477116_+|ABC-transporter-permease-subunit
MNDFFVNLYLKKSEVLSLLLEHIELTLLAVLIAVFIGVPLGIFITNYKKLSKIVIGFANLVQAIPSLAILGFLIPVVGIGSVPAIIMVVLYSMLPIIKNTYTGISNINLDMIEAAKGVGMTKTQILKIVKIPLAMPMIMAGIRISGVTAVGLMTIAAFVGAGGLGYLVFSGIQTVDNNLILFGAIPAAILALVIDWVTAKIEYAVMPNGIKKSDGTMKVKRGNKGTGKRNKIIALVTSLILIVILFFSNNPFQKSSNKIVIASKNFTEQIILGNMLEQLIEAKTDIDVETKLNLGGTQVAYSALKSGSVDLYVEYTGTAYVNLLDIKDGNTNPDEVYSKANELLKENEKVQFLKPLGFNNTYALAVRKDTAEKYNLKSISDLSGISQEFLMGPTIEFANREDGLLGLNKAYNLTFREVKPVDGGLRYTALMNNESDVIDAFTTDGLLDKFGLKVLEDDKNFFPPYYAAPLIRMDTLKEHPELEEVLNLLSNKITDEKMRKLNYEVDVNGRDPKVVANEFLVSEGYIN
>NZ_CP030775.1|WP_003424004.1|474405_475533_+|ABC-transporter-ATP-binding-protein
MIEFKNIKKSYKSKTILENFNLNIDNGKLVVLIGASGCGKTTLLKMINRLISITEGEILINGKNINNMDPIELRRGIGYVIQQTGLFPHMTVKENIEIIPKLMKKSESEIEQKTIELLNMVGLNPKEYLYRYPAELSGGQQQRVGVARAFAADAEIILMDEPFSALDPITRTELQEQLFNIQKEYNKTIVFVTHDMDEAINIADMICILKDGKIIQYDTPENILKNPENDYVEEFVGRNKIWAKPEFIKAEDVMINNPAIVSIKRNLLQAREIMRDKTVDSLLIVDKEGILLGYVTLSDIQKSDNKSILVGDIMRRSPEYVTEDTNLLDLLEKFTGLKRGYLPVCNKDGKLMGLVTRSTLISVLSSQYIDIGGDN
>NZ_CP030775.1|WP_003424001.1|473632_474262_-|GntR-family-transcriptional-regulator
MNNSSIPTYKKIALDIANKIQLNNILEGDILHGRSTLSSKYNVSPETIRRSMILLEDVEVVKTIKGKGILVLSREKAISFLNRNKSIDSIRSYKTEIDKLLNNRKEIENQLLKSIQGIIDYSSRFNEVNNIIPLEFVVPENCLYIGKTVGEIMFWQNTGATLIAVKRNDELLLSPGPYISLNPNDVLIVVGNDNIRNSVPQFLYPKNNL
>NZ_CP030775.1|WP_070780380.1|472773_473496_+|MEDS-domain-containing-protein
MREICDNCKINNRIEEYKEKLNSSIENRNGDLLDDEVVLSSQFLDNFVYKCVCCNKNIKYLSKLNLREVFGTHTTFYYYGEQHLLVNLYFYINEGIKNNELIYISMEEELYNKLLDFLSSKNVSTENIKFRNVKELILGHKKGGFNGLVETAMGILGSSNIEKYNGLRWIGQPSFVIKGTSENDFLEMEEDLNKFIKNMNAALLCVYDAYDYMHKGKIINKKVIEESFKTHSFVLNNYVS
>NZ_CP030775.1|WP_002579051.1|472195_472534_+|P-II-family-nitrogen-regulator
MKKLEIVINSEKLEDLKKILSDCNANGVMISNVMGYGNQKGYKTIYRGTEYSVNLLPKVKVETVVPADVAEKIIDKVLKEISTGNYGDGKIFIYDADDIVRIRTGERGKDAL
>NZ_CP030775.1|WP_113886058.1|470573_472151_+|ammonium-transporter
MKKSLKLLGIILFLGALALTFALAISPTSGSDPTGAAYIATTGNETITDVATTANKAYYGANYVWVMITGFMVFFFQCGFAMVETGFCRGKNAAHTMTMNFMVFLVGAIGYFLTGFAIQFGGSGGAAGLGTGGSALNAMLSIPGLGGILGYKGFMLSGNGIYDPGIFALFFFQMVFMDTTVTIPTGALAERVKYSAVIILSFFISMFLYPLFGNWVWGGGFLATLGQNFGLGHGVVDFAGSAVVHSMGGMIGLSSAIVIGPRIGKFKKDGTARPFPGHDIPMAIIGTIILFFCWFSFNAGSTLNSSDFRLAVVATNTMIAGAIGGLVAMFYMWIKYGKPDPSMTANGALAGLVAITAPCAFVNGPCAFFIGGVAGYLVCISVAFVENKLKLDDPVGAISVHCVNGVWGVIALGLFADGAYGDGINGIAGGVRGLFYGDPSQLVAQLIAVAVLVIWGFGVSYIFLKVLDKVWGLRVKPEEELAGLDIPEMGVSAYPDIQLIKSPELDYYSADNIEIKQIKRFKEKV
>NZ_CP030775.1|WP_043852473.1|470186_470513_+|hypothetical-protein
MKFINSNDDSILSKKIAVYFLQCVSLMIVFLGMFFSIFSAINHISIKVLSVNISGIVFGVLVFYLGIKYYLSVCNLKEKLLKNKYKFSWSNFNFQKGRKISSFIKGKF
>NZ_CP030775.1|WP_002579048.1|468389_469802_+|glycoside-hydrolase-family-1-protein
MFHKKLKNFPKDFLWGASTSAYQVEGASLEYGKGPSVQDIKKIPEGTPDFKVSSDHYHHYKEDVALFAEMGFKAYRFSISWARLIPNGVGEINPQGIEFYGNLIDECLKYGIEPIVTMYHFDLPAALQTKGGWSNRETIDAFVNFAKVMFENYGDRVKYWLTINEQNMMTLVGDVIGTLDGIETDNVQKELYKQNHHMLIAQAKAMKLCHDMCPNGKIGPAPNISAVYPASSKPEDILAASNCSAIRNWLYLDMAVHGRYNPTAWNYMVEKGIEPTIEDGDMEALRSGHPDFIAFNYYNTATVEAFPGEITNERSGGDQQSGHGEQGMFKGVSNPNLQKTEFGWEIDPVGFRNTLREVYERYALPLIITENGLGAYDKLEENDTINDDYRINYLRKHIEQAQLAISDGVDLIGYCPWSAIDLISTHEGFKKRYGFIYVNRDEFDLKDLRRIRKKSFFWYQNVIKTNGEEL
>NZ_CP030775.1|WP_113886057.1|466454_467948_-|leucine-rich-repeat-protein
MLRLSRKLSKLILIAMSINIINTTNVFATENNSNITISNGIATISSNVTEIDSSTFSENNNITKVIIPSNVKKIGEGCFSNFKNLKEVIIEDGVKEIGSNAFIGCENLEKINIPSSITVVGDFAFIGCSKLQDVDFQSKTTNIGGSTFLYTAWLDKMRDDNGLVIINNSVISGKNTYDSLTIPDGVKIINSHAFEGCNTLKEINIPDSVVEIRDSAFEACSNLSKVKLSNKLETIGENAFSDCKLQSVNIPSTLKSVQLYSFNSDITVTGAVDLYNSLIKPLKTAKEDNLNILLRNKPYGWGKATESGDKIFYKNSKGELQTGWMDLDGKKYYFYSNGQLATGFIDLNGTKYYFDPSSGNNLGNLVVGWKNINNNWYYFNQSGDGDKVAGFMRTSWLYDDGNWYYMYSDGTMSTGFINLNGAYYYLNNSGSMVTGWQYLQNSWYYFNKSDDGGLEGLMKKGWNRINGNWYYFNYSDGKMAHDTWIDGYYVNSSGTCV
>NZ_CP030775.1|WP_002579046.1|464258_466361_+|Cache-3/Cache-2-fusion-domain-containing-protein
MKKILNFKFNLKDKTSIKRRLLTTLLPIVIVGLLILTMCTFIGVNVYVKNDLIGLMAEKQDEAVNNIDSWIQTRLAEVQESSYNTELRKMASDYEDVDLHNEEITNKIDEINTARWNFVNSKYPNEYAAIHVLSAIDKNQWKDSSNADKLLARYYNVSAGKNATSPWASGIVAEAFEKYSATGEPYDTIFRPTYSEAYKSNVVMMFSWVKDYMNNINLGVAASIKIETVEKKVSDLKYGDKGYSMLIGNDGTFIVHPNADYILKTKINDLNDKEMINLSNAMSSQDKGTVKLGHGLNKKIAFYEKVESTGWTVVNVVYERELFKVLNIIILLISLISVALIVAISMAIYKNVTKVLMPLDDISLFADKVAQGNLSDTIEINTDDEIGKVAKAFNITVENLRNYILEIDNTLNSIAEGNLDVSLENEYKGDFIGIKNSLVNIISSMNEVFREIGEATSQVKGGSEQIASTSQTISQGAADQASGIEELTASINEINEKVQKSTGHAKETNVIVENLGLQIKESNDKMESMLMAMDEMEVASKNIKEVIITIDNIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEVRKLAEESSNAVKNTAELIEASIKSVEGGKYIADTTAQSLKEVVENTKNAIELVDNITRASEEQSVAIEQVNGGIDQIADVVQSNLAIAEESAAASEELSAQAETLESMISKFKLK
>NZ_CP030775.1|WP_113886060.1|477301_479062_-|1-deoxy-D-xylulose-5-phosphate-synthase
MYLDKINSPEDVKNLSINEMNELSSEIRQVLLKKLSEHGGHIGPNLGIVELTVALHHVFNSPQDKIVYDVSHQSYIHKMLTGRRDAFINSEKYDDVSGYTNPHESEHDFFNIGHTSTSVSLACGLAKARDLKDEKDNIIAIIGDGSLSGGEAYEGLNNAAEAGTNMIIIVNDNDMSIAENHGGLYKNLKELRDTNGKCECNFFKSMGLDYYYVNDGHDFDQLISVFSKVKDTDHPVVIHIHTIKGKGFELAETNKEQWHWGMPFVLETGDSKFPMGDAEDYGDLTAKYLLNEMKQDPTVAVITSGTPGVLGFSPERRAEAGRQFIDVGIAEEHAVALASGMAANGGKPVYGVYSTFLQRTYDQISQDLCINNNPAVILVTLASVYGMNDVTHLGLYDIGMMSNIPNLVYLAPTCKEEYFAMLKWSMNQQDHPVAIRIPAMGVINSGNEDNTDYSELNKYQVTKQGKDVAVIALGDFYQLGQSLVEKLSSENGIEATLINPKYITGLDEELLETLKKEHKLVITLEDGILEGGFGERIARYYGSSDVKVLNYGIKKEFLDRYVPDELMKKNRITPEQMSEDIINILK
>NZ_CP030775.1|WP_113886061.1|479511_479907_+|hypothetical-protein
MNFIRGWGDETSMKSFLKSTLGFGIAAIILNTLWGVITSRIGLKGGWICGFILTGTLWYVNHYLGVVENRKESAFIDMGFAVAICSFSRDFLKNGLEGIVTSAPTFICVIIGGTIAGVVAGIIKRHQKQGE
>NZ_CP030775.1|WP_002579058.1|479908_480244_+|hypothetical-protein
MNSFGALTTIFGSAIFSFGVIMYWDKFVSLLGAFGGFIAAMLIPGTMWILNHGAENHLIKQSGSIWIDMAWAVGIGVLISSIMQGGSLRKSKWIMLSAIIGGFIGGFLINM
>NZ_CP030775.1|WP_113886062.1|480324_481752_+|6-phospho-beta-glucosidase
MAFNKDFLWGGAVAAHQLEGGWNEGGKGPSTADVMTAGAHGVPREITDGVIEGLNYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWSRIFPNGDELEPNEEGLKFYDDMFDELLKYNIEPVITLSHFEIPYGIVKNYGGWRNRKVIDMFVRYATAVMERYKDKVKYWMTFNEINNQKQTGVDIFPWTCSGIIYEEGDNREEIMYQAAHHELVASALVVKKGHEINPDFKIGCMVSFVPIYPYSCNPDDMMLQVEAMHDRYFFSDVHARGHYGAYAIKEWERKGYNIKMDPEDAQILKEGTVDYIGFSYYMSNAVKSDAQNTEDLLSGHSASVKNPYVKASDWGWQIDPVGLRYSLNTLYERYELPLFIVENGFGAIDVKEEDGSCNDDYRIEYLKAHIQEMEKAIEVDGVDLMGYTPWGCIDLVSFTTGEMKKRYGFIYVDKDNDGNGTLNRSKKKSFDWYKNVIATNGEEL
>NZ_CP030775.1|WP_045143733.1|482220_483555_+|extracellular-solute-binding-protein
MRLKKVLSLVVTGLLATSFIACGSSSSNSQTASGGSNKIVVWTLSDDLKQFAEHYQEENPGKEVEVTVIAPADYPTKVTTALRGKAETPDIIVGEPQMIPNFMEAGFFEDLSQEPYNAEQYKDKIVDYVYQAGKDETGKVRALSYQMTPGGITYRRDIARAVWGNDDPAFIGEKFKDVTTITQTAKELKDKGYRIFADTGNLRWFVYGNDPQPWVKDNKLMMTDDRLAYVDAAVKLYQDKLVAFAPEWSAAWYQSMSAPIPVDTDGKELDQVDPNSEKTEVFSYALPTWGTLIIRDNAKDNIGKFGVTTGPNSYFSGGTFMGISSYSKNKEAAWDFLKYCTVTESTSDWWIEKSKGDVVSYIPSLESHKDMENEAFGGQKTYDFWLAESKKIDYSLVTKYDDQIGKFFGQAIESVQKGQMSKEDALKDFYKNVKTVYPEIEVPN
>NZ_CP030775.1|WP_043853483.1|483713_484664_+|sugar-ABC-transporter-permease
MNTVPETKSNIFSRKKSLGDINKWGYAFIFPFLVVFIVFSIYPIFKTLYLSFTNFTGFGQAEFVGIQNYTRVLKDGLFWGAFKNTLKIWSVNVILQFGLAFLLTIIFSDIKYKMKGLPIFRALFYLPNLIAATSVAFLFKALLDWQFGSLNQLLVKLGLITTKINWLGQPGTATIVVAVIGAWMWFGNAFIVLMAGVQGISKDYFEAATIDGAGRWTTFTKITLPLLKPILLYVAITSLIGGLQIFDIPFLITDGLGAPNGALNTVVMYLYNTAFKYNNIGYAAAIAYALFFIIAIFSAFTFKSMYGDSKKAKEGK
>NZ_CP030775.1|WP_003424020.1|484663_485491_+|carbohydrate-ABC-transporter-permease
MFTKIKKSIIYIGLILLSVICLGPFLIMMVNSTRSSQEIINSFSLIPGNSLQSNWKIMSDYFNIFSGLKNSLFISVCVTVLSGYFSALTAYGLAIYKFKGRNVVFTTILVLMMVPAQLGLLGFYDLINGLGLMDSYIPLIIPAIASPFTVFFLRQYIVSVLPSSIIEAARMDGASELSTFHRIGLPIMMPGIATMSIGTFIASWNNYLMPLVLLVSPKKFTLPVMMGSLSASKDITANMGATYVSVAVSVVPIMIAFCFFSKYIISSISAGGVKE
>NZ_CP030775.1|WP_113886063.1|485660_488801_+|hypothetical-protein
MKADKIVKVDYIDESKYYTIENYDKKLPFASFMAGVAGIHGIPMWSFYVNRGQAISSIGIRDKDNCIMEFFPANEAYKMVYTNGFRTFIKVIYENKEEVIEPFGVTTSDLIERTIKIKNNELKLIEINNEKNLKTEVTYFTIPNEDFAALSRKVEVTNLNDENIKVEILDGLTSVLPYGSKNIEYKEIGNTLRSWMEGYIIDGNTAIYKVRSSTGDSTKMDEVKNGYFYCAFNHSEKSIKPIVDPEKIFGFDTSLKEPVEFYENSISSLSKEDKCYNKVPCAFAGNTEELEPQKSIVIYSYIGYMNSIEKISTAQEKIINKEYFEEKCEEGNEIIDNTLKCVETESAYPLFDEYIKQCYMDNVLRGGYPLKIGGKIYYVYSRKHGDLERDYNFFSIEPNFYSQGNGNFRDVNQNRRMDNYIHPFVGTENIKLFNELIQLDGYNPLKISGKKLYVKDENKKEVLNLIDKDSSSLEEFLNKKFTVGDIYAELIKFDDYNDEDIEKLLNNIVALTEEDNEADFGEGFWIDHWTYNLDLIEEYLNIYPDKLKELLIEDKGYKFFNSPEYVLPREERYELDNEKVRQYVCLGKKGNVQPWVSDRNGNVYKVNLLTKLVMLAGTKFMSLDNMGFGIEMEGGKPGWNDAMNGLPGLLGSSFAETAELQRLLLFIRQNLNVVEGSLQVPLEFYTAMTELNGVLSDALDNKVTQFDYWNKVSNIKEVYRASTNYEVSGENKEIYVCELEDLLNKMIEKINIGIKDIKKLNDGKIPTFMYYDVVKYELNEKNQVKPLEFKVNFLPMFLEGAARYLKIVNNIEEKHEIYDTTINSDVYDKKLKMYKTSESLEAVSFEIGRARTFTPGWLERESVFMHMEFKYILELIKSGLYDEFFESIKSAMPPFMDPEVYGRSILENSSFIASSSNPDEHNHGRGFVARLSGTTVEMLNIWKLMMVGNKLFTYKDEVLTFELNPILSKDFFKDGIIKTTLLGSIKLTYINPENKNTFGEDRGIVNKLKIVDFDGNKYEFYGNKICGEIAAKIRDNQIKEIEAVIL
>NZ_CP030775.1|WP_046057278.1|488818_490162_+|glucosylceramidase
MKKYNVYETYKDGKEKLELKKLDDIALKSESNHNACIKVNTGNKFQKILGFGGALTESSSYALSKLDDDVRKKVLKSYYDKEEGIGYKFGRIHINSCDFSLENYTYVEENDLTLDTFTLERDEKYVLPLVREVKEISEGDLTILASPWSPPSYMKTNGEMNHGGKLKEECKQLWADYYVKYIEKMKEKDIDIWAVTVQNEPAAIQTWDSCEYTAEEERDFVKYYLGPTFHNNNLQDKKIIIWDHNRDIAYERAKVVLEDEEAAKYVYGTGLHWYVSEEFANVSKIHNEFPDKHLIFTEGCQEGGVHLGSWDTGERYGRNIIGDFNNYMEAWMDWNIALDETGGPNHVGNLCDSPVIIDTKEKNVIYNSSFYYIAHFSKFIKENAIRVESTVEGEKVYCLSCINEDNTICSVIMNESDDIKIVDLEIDGDKISLQLKPHSIYTIKEVK
>NZ_CP030775.1|WP_003424023.1|490413_491427_+|LacI-family-DNA-binding-transcriptional-regulator
MSTIYEIAKIAGVSPTTVSKVLNDYPDVSDKTRAKIKKILEEENFYPNSQAQNLSTKKTWTLGIVYFENLGVGLSHPFFSGVIEAFKNQADSHGYSLLFGSKNNRLGNDTFLEYFKYINVDGIAIICTDPSDKETLQLIDSDFPIVVIDMFSSNTSTVTSDSAQGCRLAINYLYNLGHRKIAHIEGISKEDNWPSSIRKEYYIRAMKDLNLDVPDEYIVDGVNFDVSGGYEAMKKLLELEEMPTAVFASCDKLAIGAIDAIKEAGLSVPEDISIIGFDDIELAKYVTPKLTTIRQDCTSVGKAAVDLLVEQINAKAKLKINKVIPVELIERESCRKI

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Crispr_ID: NZ_CP030775_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030775_6

1701660-1701743

Orphan

Consensus_repeat	Method
TGGTATTATCTAAATGAAGATGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030775_6

>merge|NZ_CP030775|6|1701660-1701743|CRISPRCasFinder
TGGTATTATCTAAATGAAGATGGAATAATGCAAAGAGGATGGGTTTATAGTAATAATTCATGGTATTATCTAAATGAATATGGA

>NZ_CP030775|6|6|1701660-1701743|CRISPRCasFinder
TGGTATTATCTAAATGAAGATGGA	ATAATGCAAAGAGGATGGGTTTATAGTAATAATTCA
TGGTATTATCTAAATGAATATGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030775.1\|WP_052501780.1\|1696269_1699497_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP030775.1\|WP_043852797.1\|1702247_1703645_+\|L,D-transpeptidase/peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|341130
NZ_CP030775.1\|WP_002580026.1\|1703708_1704311_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|197609
NZ_CP030775.1\|WP_002580014.1\|1686297_1686882_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225023
NZ_CP030775.1\|WP_002580033.1\|1711225_1712758_+\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|227588
NZ_CP030775.1\|WP_043852792.1\|1690146_1690863_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP030775.1\|WP_003411894.1\|1693489_1693753_+\|late-competence-development-ComFB-family-protein	unknown	unknown	gnl\|CDD\|378482
NZ_CP030775.1\|WP_002580034.1\|1712947_1713997_+\|M42-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349907
NZ_CP030775.1\|WP_002580030.1\|1707261_1707873_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224882
NZ_CP030775.1\|WP_002580023.1\|1699566_1700937_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274983
NZ_CP030775.1\|WP_002580032.1\|1710019_1711081_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
NZ_CP030775.1\|WP_002580029.1\|1706180_1707101_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP030775.1\|WP_002580031.1\|1708249_1709917_+\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|235154
NZ_CP030775.1\|WP_024040152.1\|1693913_1695950_+\|penicillin-binding-transpeptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|223839
NZ_CP030775.1\|WP_043852793.1\|1692017_1693334_+\|[cytidine(C)-cytidine(C)-adenosine-(A)]-adding-enzyme	unknown	unknown	gnl\|CDD\|237339
NZ_CP030775.1\|WP_002580018.1\|1691031_1691928_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP030775.1\|WP_002580028.1\|1705209_1706136_+\|LD-carboxypeptidase	unknown	unknown	gnl\|CDD\|132882
NZ_CP030775.1\|WP_003427736.1\|1688522_1689971_+\|TrkH-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223246
NZ_CP030775.1\|WP_002580015.1\|1687153_1688533_+\|Trk-system-potassium-transporter-TrkA	unknown	unknown	gnl\|CDD\|236541
NZ_CP030775.1\|WP_002580027.1\|1704574_1705072_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224248

Protein	Function_ID	Function_description	E-value
NZ_CP030775.1\|WP_052501780.1\|1696269_1699497_+\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.91063e-49
NZ_CP030775.1\|WP_043852797.1\|1702247_1703645_+\|L,D-transpeptidase/peptidoglycan-binding-protein	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	1.77339e-25
NZ_CP030775.1\|WP_002580026.1\|1703708_1704311_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|197609	smart00257, LysM, Lysin motif.	0.00014579
NZ_CP030775.1\|WP_002580014.1\|1686297_1686882_-\|hypothetical-protein	gnl\|CDD\|225023	COG2112, COG2112, Predicted Ser/Thr protein kinase [Signal transduction mechanisms].	7.13675e-06
NZ_CP030775.1\|WP_002580033.1\|1711225_1712758_+\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	1.55228e-19
NZ_CP030775.1\|WP_043852792.1\|1690146_1690863_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	3.00262e-95
NZ_CP030775.1\|WP_003411894.1\|1693489_1693753_+\|late-competence-development-ComFB-family-protein	gnl\|CDD\|378482	pfam10719, ComFB, Late competence development protein ComFB. This family is conserved in bacteria. Some members, with three conserved cysteines, are annotated as late competence development protein ComFB.	2.35982e-22
NZ_CP030775.1\|WP_002580034.1\|1712947_1713997_+\|M42-family-metallopeptidase	gnl\|CDD\|349907	cd05657, M42_glucanase_like, M42 Peptidase, endoglucanase-like subfamily. Peptidase M42 family, glucanase (endo-1,4-beta-glucanase or endoglucanase)-like subfamily. Proteins in this subfamily are co-catalytic metallopeptidases, found in archaea and bacteria. They show similarity to cellulase and endo-1,4-beta-glucanase (endoglucanase) which typically bind two zinc or cobalt atoms. Some of the enzymes exhibit typical aminopeptidase specificity, whereas others are also capable of N-terminal deblocking activity, i.e. hydrolyzing acylated N-terminal residues. Many of these enzymes are assembled either as tetrahedral dodecamers or as octahedral tetracosameric structures, with the active site located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers.	2.57861e-152
NZ_CP030775.1\|WP_002580030.1\|1707261_1707873_-\|hypothetical-protein	gnl\|CDD\|224882	COG1971, COG1971, Predicted membrane protein [Function unknown].	2.67684e-10
NZ_CP030775.1\|WP_002580023.1\|1699566_1700937_-\|hypothetical-protein	gnl\|CDD\|274983	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3. See for descriptions of different groups.	2.49277e-112
NZ_CP030775.1\|WP_002580032.1\|1710019_1711081_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	0
NZ_CP030775.1\|WP_002580029.1\|1706180_1707101_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	3.36116e-15
NZ_CP030775.1\|WP_002580031.1\|1708249_1709917_+\|2-isopropylmalate-synthase	gnl\|CDD\|235154	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated.	0
NZ_CP030775.1\|WP_024040152.1\|1693913_1695950_+\|penicillin-binding-transpeptidase-domain-containing-protein	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	5.20978e-113
NZ_CP030775.1\|WP_043852793.1\|1692017_1693334_+\|[cytidine(C)-cytidine(C)-adenosine-(A)]-adding-enzyme	gnl\|CDD\|237339	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional.	1.72526e-94
NZ_CP030775.1\|WP_002580018.1\|1691031_1691928_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	7.6785e-65
NZ_CP030775.1\|WP_002580028.1\|1705209_1706136_+\|LD-carboxypeptidase	gnl\|CDD\|132882	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment of preformed D-Ala-D-Ala dipeptides. Some enzymes possessing LD-carboxypeptidase activity also act as LD-transpeptidase by replacing the terminal D-Ala with another D-amino acid. MccF contributes to self-immunity towards microcin C7 (MccC7), a ribosomally encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. Its possible biological role is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	1.60505e-119
NZ_CP030775.1\|WP_003427736.1\|1688522_1689971_+\|TrkH-family-potassium-uptake-protein	gnl\|CDD\|223246	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	2.208e-114
NZ_CP030775.1\|WP_002580015.1\|1687153_1688533_+\|Trk-system-potassium-transporter-TrkA	gnl\|CDD\|236541	PRK09496, trkA, Trk system potassium transporter TrkA.	4.2245e-171
NZ_CP030775.1\|WP_002580027.1\|1704574_1705072_+\|hypothetical-protein	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	4.54629e-28

>NZ_CP030775.1|WP_002580023.1|1699566_1700937_-|hypothetical-protein
MNSKYTDLFHELIQAYYDGNFDETLSRIMVCHESSPQETFKIITSLCGVNIEFDNNYIYNLKKAITMYSVNKRIVEKLECSGVNCIKSKDDKFTCEAACPFNAIKYDTTNKTTYISKDICINCGICVDSCKGGRILDKVEFIPVMNLIKENKTVIAAVAPAINGQFGDNVTMDMLREAFIKIGFSDMIEVAFAADILSIKEACEFDKHVNKDGDLMITSCCCPMWVGMLKKVYTSLVKDLSPSISPMIAAGRIIKKINPDAKVVFIGPCIAKKAEAKENDLKDVIDFVLTFAELDEIFKALKIDLSSLKGIPSKDYTSRGGRMYARSGGVSTAVSDIIEELYPDKFKSFKSSTASGVKECKEILEKALNKELDSNFIEGMGCKGGCVGGPKTLIPLEKGKQQVDNFAFDSPIKVPLHSETLDNILKEIGINSIDDFKDKQKMSLFERDFNSNNVKK
>NZ_CP030775.1|WP_052501780.1|1696269_1699497_+|sensor-histidine-kinase
MIIINKLKNTILKISVIFFILNLFTSISVIKAEAYSNIVFKNITIEDGLAQATVECMIQDSRGYMWFGTNDGLSRYNGHEFEVYRNEIGVDNSIVNNYIVCMNEDRDGNLWIGTIDGASKINLSTNEITNYKNSSGLSNNNVTEILVTKDGEILLATIDGLNIYDKTNDRFTRIFNNEYIKDQEIYSLDEDINGDIWLGGSKNITKINLKNNTCEDFSDINKEYEKINDCAYKVLCDDKYIWVGTISNGLYKINIETSQTETINLSNSKISSNNIHTIMKDKNGIMWIGTDSGLVKYDSKNDEYNTYVNKAYDKYSLVDDYVYSVIQDRSGLIWVGTYAGVSMFEPENKIEHYKVDPLSHSSINENLIHGIYEDDDGLIWIGTNTKGVNVLDRKNENIYDISEFTNGTALSSNSINDISGHANKIFIATNNGLNIYDKNTRKISVYNEKQGLNAKKIRNITYDDSGVLWIGTTNGINILNLETDEITDLNYILDKYSLDDRYSECIFKDSEGFYWLGSFLNGGLIKIDPYNNTAIQYKHEGKDGDLSNNTVRTIIEDDEKNIWVGTSGGLNKLDKETGKFKTYTTSDGLANNNIYGIVIDETGNLWMSTNLGISKLDREKDRFFNLNITDGLQSNEFNGHSYGKLKSGELIFGGINGLNIFNPDEILNNMYIPRVEFDRFRVNGRTIDTLQDAKLNYNENTIGIKFFLPDYKNIKNIQYYYSLEGAGNDWSLVNTNELVLSNLGSGTYIFRVKARNSSGIFSEESSFKFTIKPPFWRSAEFILIYILIGVSLVVLIVKSKNTKMRLLDDMVSKRTRELSDEMEKNTELLNKIINLEKRKNAYLVNISHDLRTPLNVLSSIHQLINQLNKSEAGIEREKLDYYMNIFGKNVDRLLKLINDLIDSSKIEHGNYHINIGKYNIVYIVEDTALSLKDYVESKNIELIIDPEVEECFIECDSNEIERCIINLVNNAAKFTDEGGRILVSVVELENEVKIMVSDTGIGIDEKHLETVFDRFNQVIDSNKETKGGSGLGLTITKLIVGLHNGRIFAESEINVGSKFTIILPKKQPKEKVEKI
>NZ_CP030775.1|WP_024040152.1|1693913_1695950_+|penicillin-binding-transpeptidase-domain-containing-protein
MDKKKNLYMLVGVLIVVVPLVICTIIYMGYSYTHKPENKWQEYTELLQNKEYDKMYDLIDSTAQAKISREDFVARNKNIYEGIEAKDINITIKSISKEDNDTLINYNTKMDTIAGELEFDNSVKIASELGKGHTIKWTSKNIFPDLGENDKVRVKTLKGRRGNITDRNGQLIATDSYLSNVGVVPGKLGDNKEESITKIANILQCSTETINKALSANYITDDMFVPIKDIPYGDAKVVDLLKVPGVMIKEKDSRVYPLGKDTAHITGYVQSINGDELEQNKDKDYTENSLIGKSGLEKMYEDFLRGIDGAEIYIQNSEGEKKSVVLSKDARNGEDLKLTIDINVQKKVNEELGSDKGCAVVMNPENGQVLALSSTPSYDPNDFILGMSQEKWNTLNNNEDKPLFNRFQATSVPGSALKPIIAAIGVDSGSVKPDQVRKISGLAWQKDESFGNYYVTRTSNIEEVNLESALVYSDNIYFAQIAMDMGSNLIEEKLKGFGFGEKIPFEFALYNSQYSNDGKIKEGAQLADTGYGQGEVMVNPVHLTSMYSMFLNQGNIIEPHLVIDNKNNNIIWKKSAVSKESAQVVLNDLIQIVENPVGTGHEAYNSKLKIAGKTGTAEIKNSQTDTSGTELGWFVGMTTEGDNKVLVTMMIEDVKGRGGSHYVVPKVKDVIESVSLKQ
>NZ_CP030775.1|WP_003411894.1|1693489_1693753_+|late-competence-development-ComFB-family-protein
MKKITNCMEISVEECLDKLLEESNGCKCEKCRYDMMAIALNNLKPYYVTTHLGEVITKIKNMEQQSEANIVVEVTKAIKKVHMSPKH
>NZ_CP030775.1|WP_043852793.1|1692017_1693334_+|[cytidine(C)-cytidine(C)-adenosine-(A)]-adding-enzyme
MNYKLKIPSDVQYIINVLIENGYEGYMVGGCVRDLLINREPNDYDITTNAKPEVVARLFDKVILTGLKHGTVTVIINKVQYEVTTYREDGEYKDSRHPENVKFVTDIKNDLSRRDFTINAMAYNKEKGLIDYFDGLSDLKNKVIRTVGNPEKRFTEDSLRMLRAVRFAVQLDFKIEESIIQSIKILNNNLEFISKERIREEFNKIILKDPKGLKLLHECSILKYIADDLDKAYDYYINDKIKCYNLYEHLILSSCNIKKDLSLRLTMLFHDLGKLKDWNNKLEKVDNIFLESACMAEKILRSLKYDNGTIKKVKTLITYMHSDLEDKVSIKKLLNIIDVELFEDLIKVKKAHIMSENIEEVKSLNIEKLYCDILEKNECFRIRDMKINGEDIIKIGVKKGKDVGTMLNYLLCKVIEDNNLNYKKKLLELAEDKLSMNI
>NZ_CP030775.1|WP_002580018.1|1691031_1691928_+|MurR/RpiR-family-transcriptional-regulator
MEELNNENSKDLMRLIQGKFIRLSKGQKLIAEYILKNYDKAAFMTAAKLGNAVGVSESTVVRFAIEVGFSGYPKLQKALQELIKNKLTTVQRLELRNDYFSDGDALKGVLKADMENIRATLEKINQNTFQDVVQHIFEAKRIYIIGLRSSTALAEFLGFYLNIILQNVKVVSYGISDVFEQMINVGEGDLVIGIGFPRYAAKTIDALEFSQDRGAKVVALTDSLLSPLATKADYTLIAQSNMASFVDSLVAPLSVINALIIAVGMREKENISNVFSNLELIWKNYNVYSINNKNVADD
>NZ_CP030775.1|WP_043852792.1|1690146_1690863_+|rRNA-pseudouridine-synthase
MEERLQKYMASCGIASRRKCEELILLGKVKVNGNIIEELGFKVNPLKDIVEYDGRVITKEERKVYIMLNKPEDVITSVKDEKDRKTVIDIVKVNERIFPIGRLDYDSSGLILLTNDGELYNKIIHPRVELDKKYVAVVKGEVSLDDKEKFESGIDIGGYITAPAKLKMLEYSHRKDLSTIEVCIHEGKNRQIRKMCSAINHEVMSLKRVSIGNIRLGQLKKGEYRYLNDEEMKYLMSL
>NZ_CP030775.1|WP_003427736.1|1688522_1689971_+|TrkH-family-potassium-uptake-protein
MNYKAVLSILGNVVKYMVALLFVPLLIALYYGEGDAKSFLLTILIGAPIGFILSNIKAEKKAIYAKEGFLIVGFAWIIISAIGALPFVISGAIPSFIDAFFETVSGFTTTGATILTAIEGLPKGILFWRSFTHWIGGMGFLIFMLALIPSLGSNSIHLLKAESPGPSPGKIVPKIKETAKILYLIYFALTLIEGILLMCAGMNLYDAVIHAMGTAGTGGFSNMNASIAAFNSPAIEWIITIFMLIFGINFALYFQILKGNFKGFFKNEELRYYLLIIVSAFILITVNIISLNGGDIILSIRQSAFQVSSIVTSTGFATVDFNFWPTLSKLIIVMLMFVGAMAGSTGGGIKTVRIVIMLKAIKREINKIIHPKRVNSVKIDGKTVDEDIIHGVFLFIGAYIIISLIAIFIISFDNFDVVTTVTSVITTMSNIGPGLEVVGPAGNFAAFSPLSKLVLSFCMLAGRLEIYPMLIMFSPSIWRKNH
>NZ_CP030775.1|WP_002580015.1|1687153_1688533_+|Trk-system-potassium-transporter-TrkA
MMNIIIVGAGKVGYAIAKNLSTGNDNVTIIDNKMTALERINNNLDVMCVKGNCTSLKVLNEAGIEEADLLISVTNSDELNMLCSLAGKKLGAKHTVARVRNPGYDEDITLLTEAVGIDLVINPEKAAAGEISKLIKYPSVCSIDNFANGRVNMVGFDITEDTGLENKKISELGYLRGNVLFCGIERNGEMIVPKGDYIFEKDDHVYVIGEHKDIQEIFKKFGKYRRKVRSSMIIGGGRIGYYLTKIVSEAGVHCKLIENDFNKCEELAELIPNSVIINGDGLDQELLLSESLEEADSFITLTGRDEDNLIASLFAAKNGVKNIITKVTRDNYNEIAKTIGINSTINPKSVTANKIIKYVRTLKNRKKCPIENVYKICNEKAEAIEFIVKENAQYINIKIKNLNFKYDSLIATIVRENKTIIPSGDDILKPGDRVVVVTKDTNLLSLSGIFVGGGKNNEL
>NZ_CP030775.1|WP_002580014.1|1686297_1686882_-|hypothetical-protein
MRYILDIKECEFLGKGHEGSVYLTPEGYALKIFLKKKKAKEEVSILELVKTSKFFPKVIFIAGNMILREYVDGVTLFEHLKKNGISYKLSCEIIDLIEDFKKMKFKRLNIRNAHIFVDKNENIKVIDPRKIFTKNTPYPKDIIKILVHLNIFDDFLKNVAQYRSDLLQYYVDAYNYYVYMSKKSMHIDMHAEIC
>NZ_CP030775.1|WP_043852797.1|1702247_1703645_+|L,D-transpeptidase/peptidoglycan-binding-protein
MKEFMYEKSTKISCILLIVLFLIYFLGAFYFKTHFFFKTSVNGIDISFKTVDEAKDIVYNELSDFKVVIKDDSNEDKIESKDINLEYNGDKKIEEIKEKQSFFKWASALIYNKQYENLDIFTYDESMLEEKVKDLNFFKNLDVIEPKNPQFQYTDGKYIVLEEVKGNKLNYEKTVKAIKSAIEHGNKVVDLNTTGCYERPKYTKDSEKVKEVKDIIDKYVYSKIVYSFDELMETVDGSIINKWIDIDDDMNPSINEKKVKEYIDSLCEKYNTVGKERKFDSSIGKTVIVKGGYYGWKINSNEEVKALIENIKHGQSVFKEPIYSQKGLSRSDDDIGDTYVEVNITRQHLWFYKNGKLLTQGDIVTGCQSKNTPTAEGVYALNYKQKDATLKGDGYSSKVSYWMPFNGNIGLHDARWRSSFGGNIYKTNGTHGCVNMPQYLAKIIFENIESNTPIICYSEDTKNNN
>NZ_CP030775.1|WP_002580026.1|1703708_1704311_-|LysM-peptidoglycan-binding-domain-containing-protein
MKKYYYLFLFTALISILLLSCQFIPSLKSNKSISPNNNSFDIHSNDANQNSDSTNNYENSNNNSDDFVIPCSNAVHITIREFINNQQCSSYLVKENETLNDILMKYNSTCAPNASLKLIKELNNITSTNDVKAGTTLKIPETTMKNGSIYTISQGDTWSKICEKYYPVYDIDSIMKLLIFINDYKNDILPLGDTIFLPKI
>NZ_CP030775.1|WP_002580027.1|1704574_1705072_+|hypothetical-protein
MFEFNIGDKVVYPNQGVGVIDLIEEKEFKGKKEKYYKIHLINNTMKLSLPLSRVKSANMRHISDSKTLDSKLNNIKYYVKEVDKLAKTNYKERNEIYSTKVKSGTLEDLLEIISNLTELKTIHDLNSMEKTILRNTKRILIDEIAQSKKISLDEAGYLLDIFMNS
>NZ_CP030775.1|WP_002580028.1|1705209_1706136_+|LD-carboxypeptidase
MIRPKPLKKGDTIGIIGTCSPPKKERIDPAIKWIKSLGLEVVIGRSVNENHGYLCGEDKVRADDLNYMFHNKDIKGIFIARGGYGAARILNMIDYDNIKKNPKILAGYSDVTALHIAINQKCKMITFHTPMPCTEFYTDIDDYTVESFKDSIFKINYTKKVVNPDKCKSFEGLVKGNACGRITGGNLSIIASLMGTPYEINTKNKILFLEDIDESPYKIDRMLTQLRLANKFKDAAGIILGSWTGCDVKDTSRSLSLNEVFNEIIIPEKRPTIMNIACGHTLPTMSIPLGSNISINADSLEILNIDTD
>NZ_CP030775.1|WP_002580029.1|1706180_1707101_-|DMT-family-transporter
MNNYKGIIYAILSSIAFGIMPIFAKIAYKNGSNPTSSLLFRFLISGLILLLYLNFKKVSIKISVKQFLLLFFIGMFGYTITTITLFVSYNYLDSGLATALHYIYPALVCIFSFILYKENITKEKIFSLVLSIIGVYSLIAFESKTLNILGILLALFSGLAYALNVISLSFKSIKSIDNRVVTMYICFGASLGMIIYGAFTESLTFTINLEMMISYLGLSIISTIASMLFLLKAIKLIGSTSASILATFEAVVSIIMGIIFLNEKLTFALILGTSLIIISTTILAREKSPKPCDQYNKLSNAIDINH
>NZ_CP030775.1|WP_002580030.1|1707261_1707873_-|hypothetical-protein
MNFLSALLLSTAINIDTLKISFSSKNDSSVPLNLKILFASIFTTFITFLAFCFGKIIDIYFTHSLSNIFGSVLLGFVGVYYLIEHIRIQKDNDGYDTSFYVNNFKKHKNLIELNNPYIYSDSFKNLFNISIALSLNNILPSIAGSLTNINLPLTILFNFLICIFFYIAGNFIYNKKFIKYIKTNHYIITSILLIILSVFESFH
>NZ_CP030775.1|WP_002580031.1|1708249_1709917_+|2-isopropylmalate-synthase
MLNYKKYKRFETIKLKDRTWPDNEITKAPIWCSVDLRDGNQALINPMTVEEKIEFFNLLVKLGFKEIEIGFPSASQIEYDFLRRLVDENLIPDDVMVQVLTQARPHLIKRTFESLRNVKKAIVHIYNSTSVLQRDVVFNMSKEEIKEIAVEGTKLVKEYAKDFEGEILLEYSPESFTGTEVDYALDVCEAVMDTWEASKDNKVIINLPATVEMDTPNVFADQIEWMCRNFKDRERVILSVHPHNDRGTGVADSELALLAGADRIEGTLFGNGERTGNVDVLNIAYNMFSHGVNPQLDIENINEIIEVYERCVKIPVHVRHPYAGNLVFTAFSGSHQDAINKGMKKYNERHGNIWEVPYLPIDPSDLGREYEALVRINSQSGKGGVAFVMDHCYGFKLPKTMQKEFADIIQKMSEVKGEISPSEVMDAFTKEYLDLDVPFKLLKCTFTDISEMDGSEDTKADVIVVYNGEQRVLEGIGNGPIDSFKKALAESSLINVKIIDYTEHAMSTGSEAKAASYVYMERLDNKKKTFGVGTDSNITRASIKSMMSAINRLYK
>NZ_CP030775.1|WP_002580032.1|1710019_1711081_+|histidinol-phosphate-transaminase
MSIYWNDHVKTLEPYVPGEQPKDKKYIKLNTNENPYGPSPKVIDAIKNAVCDDLKLYPDPTCSNLSMEIAKYYHINDDEIFIGNGSDEILAFVFMTFFQKDRKVLFPDISYTFYNVYAEMFNVNYEHIKLDDKFNIPLEGFYKDNGGIIFPNPNAPTGKYIETNKIIEVLEKNKNSVVIVDEAYIDFGGKSMVEYIETYPNLLVIQTFSKSRSLAGLRVGFAIGNSQLIEGLNRVKNSFNSYTIDRLALIGAAEAIKDKNYFDVTTKKIIRTREDTVKKLENLNFEILDSKANFIFVKHKEFSGKYLYETLKENGVLVRHFNKERIEDYLRITIGTDEEMSLLIANLKKILKY
>NZ_CP030775.1|WP_002580033.1|1711225_1712758_+|leucine-rich-repeat-domain-containing-protein
MTYKKNRLLALGIITIGLSFISTNANAEIKKTEVYEETMQNEKLLANDTSIKEKTQSDYKIKRNWLTEEVASQLNKDFKDLTTEDFEHIIKIDFRYKKIDDTIPDEIALLKNLQYLDLNYCRLYGDIPEEIANMTNLTHLDLGDNKLGKLPESLEKKIIDGDYPYCDVEGNQLRLEKGWHLLKGNWTYIDRYGERLTGVQTIDKVTYDFGEQGFIKEGWEQVDNIWHYYDRVSGMIKNDWKLINSKWYYFNADGIMVTGLQNIQGTKFCFAPSGEMLTGFQNIGGYNYSFCESGGMQYGLVNVNGKQYYFDETTGIMATNTEKVINGKKYIFAADGSGSIKSNVWIDNYTYIQANGQTVNTYYDYSHSNTNYQLFKYMTDLGNQISVDRTAVALHGGITSNNCVYFASEALRRVGVGIPTSTCNTYELENELKYMGFVPCYDLSQLKPGDIVFTNNYSHVYIFMCWDTDGYAYIVDNQSYNFDNKVLHKRQVYQDTSITDRATHFYYYPN
>NZ_CP030775.1|WP_002580034.1|1712947_1713997_+|M42-family-metallopeptidase
MNINVNKEYLLNTLKEILQENSPTGFCFEIIDKIETIVSGFGYSFERNNKGCGIITIEGKENSKTIGLSAHVDTLGCMVRSITESGKLKFTLLGGPLVPTLDGEYCNIRTREGKIYSGTFLSTSPAAHVFEDAKSKKRDPENMEIRIDEVVSSKKDVIDLGIRPGDFVFIDPKPVITESGFVKSRFIDDKGSVACLLTILEMFKKNNVIPDYTTKIIISTYEEVGHGASSIPKDITEIISVDMGCIGDDLSCSEYDVSICAKDSGGPYDYNMVTDLVNLAEANKLNYAVDIYPFYGSDVGAALRGGNDIRGALIGPGVSASHGMERTHYKALENTVKLIYHYLTKETLR

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Crispr_ID: NZ_CP030775_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030775_7

2225605-2225827

Orphan

Consensus_repeat	Method
TGGGTAAGTTCGACTAGCCAAATATAAAATTTGGAGTGTCGCTTTGCTCCTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030775_7

>merge|NZ_CP030775|7|2225605-2225827|CRISPRCasFinder
TGGGTAAGTTCGACTAGCCAAATATAAAATTTGGAGTGTCGCTTTGCTCCTTTTTTTAAGGAAACCCGACTCACATTCGTTCCCTGGGTAAGTTCGACTAACCAAATATAAAATTTGGAGTGTCGCTTTGCTCCTTTTTATAAGGAAACCCGACTCACATTCGTTCCCTGGGTAAGTTCGACTAGCCAAATATAAAATTTGGAGTCTCACTTAAGGCATTAAT

>NZ_CP030775|7|7|2225605-2225827|CRISPRCasFinder
TGGGTAAGTTCGACTAGCCAAATATAAAATTTGGAGTGTCGCTTTGCTCCTTTTT	TTAAGGAAACCCGACTCACATTCGTTCCCTGGGTAAGTTCGACTAACCAAATATAAAATTTGGAGTGTCGCTTTGCTCCTTTTTATAAGGAAACCCGACTCACATTCGTTCCC
TGGGTAAGTTCGACTAGCCAAATATAAAATTTGGAGTCTCACTTAAGGCATTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030775.1\|WP_043853061.1\|2214313_2215657_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240543
NZ_CP030775.1\|WP_002580494.1\|2234882_2235329_-\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
NZ_CP030775.1\|WP_002580481.1\|2219913_2220207_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|236174
NZ_CP030775.1\|WP_043853062.1\|2218187_2219921_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|272915
NZ_CP030775.1\|WP_002580479.1\|2216492_2217509_-\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|379231
NZ_CP030775.1\|WP_002580496.1\|2236127_2236592_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_033128060.1\|2230589_2231483_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP030775.1\|WP_002580483.1\|2222241_2223681_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP030775.1\|WP_002580484.1\|2223693_2225133_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP030775.1\|WP_003426586.1\|2215833_2216421_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240048
NZ_CP030775.1\|WP_002580495.1\|2235737_2235971_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_003406298.1\|2233910_2234648_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP030775.1\|WP_043853063.1\|2231592_2232624_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_002580482.1\|2220349_2220715_+\|YccF-domain-containing-protein	unknown	unknown	gnl\|CDD\|236975
NZ_CP030775.1\|WP_003406209.1\|2228421_2228904_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_033128061.1\|2232945_2233626_-\|M50-family-metallopeptidase	unknown	unknown	unknown
NZ_CP030775.1\|WP_043853060.1\|2213072_2214074_-\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|163517
NZ_CP030775.1\|WP_002580487.1\|2227850_2228021_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030775.1\|WP_002580485.1\|2225148_2225427_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP030775.1\|WP_002580489.1\|2229117_2230203_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236329

Protein	Function_ID	Function_description	E-value
NZ_CP030775.1\|WP_043853061.1\|2214313_2215657_-\|MATE-family-efflux-transporter	gnl\|CDD\|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	4.52682e-126
NZ_CP030775.1\|WP_002580494.1\|2234882_2235329_-\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	1.62104e-42
NZ_CP030775.1\|WP_002580481.1\|2219913_2220207_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|236174	PRK08178, PRK08178, acetolactate synthase 1 small subunit.	2.44935e-34
NZ_CP030775.1\|WP_043853062.1\|2218187_2219921_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|272915	TIGR00118, Probable_acetolactate_synthase_large_subunit, acetolactate synthase, large subunit, biosynthetic type. Two groups of proteins form acetolactate from two molecules of pyruvate. The type of acetolactate synthase described in this model also catalyzes the formation of acetohydroxybutyrate from pyruvate and 2-oxobutyrate, an early step in the branched chain amino acid biosynthesis; it is therefore also termed acetohydroxyacid synthase. In bacteria, this catalytic chain is associated with a smaller regulatory chain in an alpha2/beta2 heterotetramer. Acetolactate synthase is a thiamine pyrophosphate enzyme. In this type, FAD and Mg++ are also found. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed. [Amino acid biosynthesis, Pyruvate family].	0
NZ_CP030775.1\|WP_002580479.1\|2216492_2217509_-\|FUSC-family-protein	gnl\|CDD\|379231	pfam13515, FUSC_2, Fusaric acid resistance protein-like.	3.8671e-07
NZ_CP030775.1\|WP_002580483.1\|2222241_2223681_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP030775.1\|WP_002580484.1\|2223693_2225133_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP030775.1\|WP_003426586.1\|2215833_2216421_-\|NUDIX-domain-containing-protein	gnl\|CDD\|240048	cd04692, Nudix_Hydrolase_33, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	7.62589e-29
NZ_CP030775.1\|WP_003406298.1\|2233910_2234648_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.80787e-07
NZ_CP030775.1\|WP_002580482.1\|2220349_2220715_+\|YccF-domain-containing-protein	gnl\|CDD\|236975	PRK11770, PRK11770, YccF domain-containing protein.	6.47047e-47
NZ_CP030775.1\|WP_033128060.1\|2230589_2231483_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.55394e-62
NZ_CP030775.1\|WP_043853060.1\|2213072_2214074_-\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|163517	TIGR03805, beta_helix_1, parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown. [Unknown function, General].	5.93341e-05
NZ_CP030775.1\|WP_002580485.1\|2225148_2225427_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	1.1079e-18
NZ_CP030775.1\|WP_002580489.1\|2229117_2230203_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|236329	PRK08664, PRK08664, aspartate-semialdehyde dehydrogenase; Reviewed.	0

>NZ_CP030775.1|WP_002580485.1|2225148_2225427_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MKVTIDEVKYIGKLAKLNFSDEEAEKFAGEFEGILENFKYLNELDLEINEDEKKELKPIVRKDEVKKFECTDLFRNVKDKQDTYIRVPKIIE
>NZ_CP030775.1|WP_002580484.1|2223693_2225133_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MKLTLKEMVSKIKSRELTSEELVSYYLKNLLEKEPKVNGFLTVMADEALAKAKEIDNRIANGEKLGALAGIPIGIKDNICTEGVKTTCASRMLEDFVPPYNATVVKKLLEEDAVIIGKTNMDEFAMGSSTENSAFKKTANPRDLSRVPGGSSGGSAAVVAADMCPVSLGSDTGGSIRQPASFCGVVGLKPTYGLVSRFGLVAFGSSLDQIGPFSQNVEDSAYMLNIIAGTDLYDSTSIRELKHIDYTESLKDGVKGMKIGVPEEFFGEGLDEEIKEAVKKSIEILKENGAEVEMFSLPIMKDGLAAYYIMSSAEASTNLSRYDGVRYGYRPEKFDSVDELMEKSRTEGFGQEVKRRIMIGTYALSSGYYDAYYNKADKFRTKLKHDLSKTFKKYDLILGPVSPVLPFKLGEKNSDPLAMYLADIYTINVNLAGIPAISIPGGVSKEGLPIGIQLMGDMLCEEKIFKAAYSLEQSLKVEL
>NZ_CP030775.1|WP_002580483.1|2222241_2223681_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNLETVIGLEIHAELKSKTKIFCSCSTKFGAKPNENTCPICTGVPGTLPVLNEEVVNLAIKAGTALGCKINKFNKMDRKNYFYPDLPKNYQTSQFDIPICSGGTVEYDYEGKHVKVRLNRIHIEEDAGKLVHVEGEPISLIDYNRVGVPLAEIVTEPDMRSVGEAVEFLRILKSILEYSEVSDCRMEQGSLRCDANISLRPVGSQEYGTKVELKNINSFRELEKALKKEEKRQRELISFNEGHKIVQETRRWDAAKGKTISMRSKEQAHDYRYVVEPDLPPIIIYDNQIEEIRKSLPEMPDEKRERFLNEYKLSEKEVEILISDIVLSRFFESVVKEGITPKMGANWILGDILRILNEKKLDTDQMPLNAENFAKLLKVVNEGKISNNIGREVLDEIFDENKDPMKIIEEKGLMQISSTDELEKLIDEVIAANPQSVEDYKAGKTQSAGFLMGQVMKKSQGKANPKVCKELIDEKLSKL
>NZ_CP030775.1|WP_002580482.1|2220349_2220715_+|YccF-domain-containing-protein
MSCLGNIIWFIFGGFFNALGWFACGIFWCITIIGIPIGIQCFKMGKLQLAPFGKEVIDSESSGLTSFVLNILWIIFGGFELCIANLLSALLLCITIVGIPFAAQSLKMAKLSLMPFGKEII
>NZ_CP030775.1|WP_002580481.1|2219913_2220207_+|acetolactate-synthase-small-subunit
MINTNFYLIELLVRNHAGVMSHITGLFARRAFNLEGILCAQVGDGTTSKMFLLVKNDFVLDQIIKQLEKLYDVLEVAIHQDYDVSVFKNLDKVLKIN
>NZ_CP030775.1|WP_043853062.1|2218187_2219921_+|biosynthetic-type-acetolactate-synthase-large-subunit
MKYNGAEIVIKLLENQGVEYISGIPGGFNLPIYDALYKSKIKHILARHEQGAGFIAQGISRTTNTAGVCFATSGPGATNLLTAIADAKLDSIPLVAITGQVPLSAIGTDAFQEVDAYGLTIPITKHNFLVRNIHDLFTIIPEAFRIALEGRPGPVLVDIPKNIQTQVIELETFPHSAYSQSNRSETENYDDTINNDHINKCNKKIFKRSTLECMAELINNSHRPIIYAGGGVIRANASEELCEFAKKNSIPVTLSLMGLGAFPSDDILNLGMLGMHGAPYTNYLMNEADLILAFGIRFDDRATGNIQKFCPNASIIHVDIDPSEINKVKNSNLSMVADIKEFLKEMIPLINSKTRLSWIKRVGCFKEKYPLPSYENPLHPANIIPYIASKVSSDTIISTDVGEHQMWTAQRYPFKKPKTLLTSGGLGTMGFGLPVAIGASLVNTDKAILCFSGDGSILMNIQELATLADFNLNVKVIILTNHHLGLVRQQQNLFYNEHYIASQFISNPDFATIAKGFGINSCDLATENDPLKKLDEILSKSGPWVINIPIEECENVLPMVAPGKSNLEMIGSGELND
>NZ_CP030775.1|WP_002580479.1|2216492_2217509_-|FUSC-family-protein
MKKKIISKTLTFICILLFISLFKHIFGDANSPVGITTVIAVLILMSENLTVSPIKNFMKLLLINIIIGMGAFIASQNIYWGVIIDFSVLWFIGYYFSVNLTKTIILPFGLQYLFILYDPVYGENLIKRFGALAFAPFLIMLIQYLIYGRNKKIEVEKSDILEFSKSDDTYEKVKILGIEFKVNKIRAYYALRLSLLIAITAFINGRFLLPNGIQEGKWMVYSIFSLTELFGENCRIKSKKRIQGTIIGALIVLILFMFIKSTPLRGLIILIAGYLNSYFEDYRDTMVCVTVSTVASVALTNGTLLTAIERILFVSIGILISLIGNKLIFSDFKKGEIE
>NZ_CP030775.1|WP_003426586.1|2215833_2216421_-|NUDIX-domain-containing-protein
MEEMIDIYDENFNKIGVKSRFDVHKYGFKHKVVQCYIINKIDNSKWIYFQQRSFDKDNYPGFYDIACAGHIDSGEQASSSMIRELQEEIGLRVEKSQLNYAGTKLENKNHGNILDDEICELYVLSIENENFVLGEEVEDMVKVLFNDYKSWINEQYKVLKVFSIKHKKYLELNEKNICGHIRDYNKDFLKVIENI
>NZ_CP030775.1|WP_043853061.1|2214313_2215657_-|MATE-family-efflux-transporter
MSKDMTIGNPSKILFYFAIPMVLGNILQQLYNIVDSMIVGNFVGADALAAVGASYPITFVLITVANGAGIGCGVVISQYFGGRMLEKVKTSIFTSIIFISIFSCILMVLGIIFADWILSVMNTPKNIFYDSSSYMKIYFMGVVFLFIYNIVTSCFNALGNSKTPLMFLLCSAILNILLDLLFVIKFNMGVRGTAFATLISQGISALLSLSFLLKKIKMIKTDTTVKKFDIRILKKISKIAVPSILQQSIVSIGNLFVQALVNSYGAVVIAGYAAATKIDSMTILPMSNMSNAVSTFTGQNIGAGKIERIKKGYKSALIMIGIFCVFAASLLFLAGHQLIGMFVDSVSNQGVITIGTQYLKIVSVFYFFMGLMVITNGVLRGSGDMKMFLASTLTNLSTRIIFAYGLASFIGQGAIWWAVPFGWIFASTVSVIRYKSGKWKNSTVIRF
>NZ_CP030775.1|WP_043853060.1|2213072_2214074_-|right-handed-parallel-beta-helix-repeat-containing-protein
MKKVRNLCLIAALSLIAVGGSSFYQIPVNAATTIEVSNSGTSLKDALAKAKSGDIVNITGTVKSGTVNVPAGVTITGEKGKSKIDFSSTSGSSGKGFVIKSDGASIKNLDVYGAADNGIYIEGSKNNITNVNVYKNKDAGVQLSNGAANNTLTKVYSYSNADQTGENADGFAIKLHSGEGNKLIECTAEGNSDDGYDLYAAHGAVTFIRCKAINNGNCDGIKGDGNGFKLGGVDNKTSGVAAHLDPLNHELTDCIAIGNTGSGFDRNNQNGVVKMTNCTGENNGEYNFNFPLKGKPSALGYEVTFGKAIMNGCTSINGGNVITGASLTDCTGF
>NZ_CP030775.1|WP_002580487.1|2227850_2228021_-|hypothetical-protein
MKRKILTISIGVLLLFSGVYYYNCKEISEKYDENSCESNINRIEMHPLDSLKYKFL
>NZ_CP030775.1|WP_003406209.1|2228421_2228904_-|hypothetical-protein
MFIDFNDIMFGLRNGRYVYIGSGSSREVYDLENGYVVKVAKNKAGIEQNRAEYYISANDSSGIFAKVIEASSDYGLLIMRKAKKIKDIRFVWNYFNAGNKHEFYESPHMQRLKNKYKLLLGDFEKASSWGIIKGRPVIIDYGFTRYVERKYYRRFYEEDL
>NZ_CP030775.1|WP_002580489.1|2229117_2230203_-|aspartate-semialdehyde-dehydrogenase
MEKKLRVGIIGATGMVGQRFACLLENHPWFDIVALAASKRSSGLTYEEAVGDRWKMPTAMPEKYKKMVIMDADNVEEVCSKVDFVFCAVSLNKEETKKLEERYAKCETPVVSNNSANRHTDDVPMIIPEINGEHAKVIESQRKRLGTTRGFIAVKPNCSIQSYVPALNALKEFGLEEVVVSTYQAISGAGKTFNEWPEMLDNVIPYIGGEEEKSEIEPLKIWGTVENDIIVDAKTPVISAQCIRVPVLDGHLATISVKFKNKPTEKQIIDAWNNYKASDMVLNLPSAPKQFIRYMEEDNRPQTHLDRDYENGMGISMGRLREDKIFDYKFVGLSHNTLRGAAGGGVLSAEYLTAAGYITAK
>NZ_CP030775.1|WP_033128060.1|2230589_2231483_+|LysR-family-transcriptional-regulator
MDFKQLNAFLTISKLQSFTKAADALGYAQSTITTQIKLLECELDVKLFERIGKTTTLTHEGKKLLPYAKQILKLSTDIKSTVSNENKPTGTLTIGAAESLCVLRLPEILKEYKHLYPDVDVSLKFGSCADFRHYLSENLIDVAFSLGVKIDSDEFISDVELKEPMLLLAYPGHDLIKKREIFPIDIKDESLILTETGCSYRAAFERILKDNGIKPNITLETGSVQAIKQFTMSGLGITFLPEIAVKDEVKAGKLIPLNWAGPDLNIISQVIYHKDKWISPALKEFISLSHRFLKQNL
>NZ_CP030775.1|WP_043853063.1|2231592_2232624_-|hypothetical-protein
MKYIKRFVAWAILSLIIQVGALFILDRVIFKQSSAFESKKIELDKPYEDKINIKIPKDADEIKVSYNGKYMSYSKGDKLNMIETKSGKDKSIETENKGEVMYYEWLYERDMIVILEKVNKKGKDKIQLVTYNPKNSATTLVTEICDFKSGMKIKNVTESVFTSVYYVYVSNNEGYDRCYRIDINNDKFDVPLKGAGMENMKVIPHKDRLIYDDVVNSSIYATSPNTKLKFNTNNKLRLIGIDRNDVIYIGEVSGDKICGIVYGKIDESTSKWNSIKLDSPANSSDIFFNSKSEIMVNNILEEKIKNITTGKEYPYTGKFIDVKDDFIALDDNGKLVFQKIKDN
>NZ_CP030775.1|WP_033128061.1|2232945_2233626_-|M50-family-metallopeptidase
MENLALKNVVVIISYFLIYIYVLRYIQCYSWGALKMISRSVYKIFSMIGAPAHEAAHAVAALIFGFRITNINIFKHVKFMAPSNLRGIIGGFVVSIAPAVFNIIIFTVICSKSDNIYFNFVMFLILISCIAPSNSDIKGMLPVMIIGIIIIVVVTYALGWAVPSINVYIKNSILLVGKFYALYLAVLTIIVTIKGCFINRTINPFYILKLYKNLVVNGLTIMAKAS
>NZ_CP030775.1|WP_003406298.1|2233910_2234648_-|tetratricopeptide-repeat-protein
MENNEIQKKIDLFLNEHKIKIQGGQINTEKDMSLLLSRIAKSEIDKGNYEKGLYFAVNSFKFDKKNLYSVFLQGLGFRFTGQYEDAIKAFKYCNSRKHDLASLANIGFCFAELKDSEKALDIFNKIIENITEEEESNNAQLMALVYECMGNIYLSREDVLEFDSTDKLKINYKLAVKYYKNSLRLNRVNHVLLNKLAACYYHFDDERKALYCYEEAVKVAPEEKNYEEAVKELRNAGVIPDVVEF
>NZ_CP030775.1|WP_002580494.1|2234882_2235329_-|Hsp20/alpha-crystallin-family-protein
MFGLIPIRTNNATDKGGALSDFFNDFFNDDFLSPMGIGIDMSKFNADVRETENEYLVCAELPGVNKNDINLDFKNNNLIITAKREEVHDDSKDSYIRKERSYGQFSRSFYFDNVKQDKIRAKFENGELKVILPKELKSKENSSNIFIE
>NZ_CP030775.1|WP_002580495.1|2235737_2235971_+|hypothetical-protein
MEINFSKVHEEKEMYAVLKASVINGKEIESQLLGIYESEDDVKKAKKKLSVDGHKTVVKVKVHIDPIEYLGDIDNIK
>NZ_CP030775.1|WP_002580496.1|2236127_2236592_-|hypothetical-protein
MQVNLSDLIEAIEFENDMLSHYYNKDTGVIIYKEDMETASYFAEDIDRVDSMEEWEKELIEGLYDLKKNPENYIKLPDKEELNELKIMINFCSSFSDIELPKLEEFNDEGKMLHEVKNIIRNKGLINEWYDYREYSEREIAIEWCKKNNIQYIE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KJ776578	Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence	19608-19640	8	0.758
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KJ776580	Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence	24419-24451	8	0.758
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KT901798	Clostridium botulinum strain GA0702E1CS plasmid pGA0702E1CS, complete sequence	16142-16174	9	0.727
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KJ776585	Clostridium botulinum strain DB2 plasmid pDB2, complete sequence	13019-13051	9	0.727
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KJ776583	Clostridium botulinum strain KapchunkaB3 plasmid pKAPB3, complete sequence	13028-13060	9	0.727
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KJ776581	Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence	19025-19057	9	0.727
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KJ776579	Clostridium botulinum strain KapchunkaB2 plasmid pKAPB2, complete sequence	13028-13060	9	0.727
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_CP017255	Clostridium taeniosporum strain 1/k plasmid pCt2, complete sequence	49619-49651	10	0.697
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KT901798	Clostridium botulinum strain GA0702E1CS plasmid pGA0702E1CS, complete sequence	15947-15979	10	0.697
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KJ776576	Clostridium botulinum strain Eklund2B plasmid pEklund2B, complete sequence	13004-13036	10	0.697
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NZ_KJ776581	Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence	18830-18862	10	0.697
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NC_018653	Clostridium botulinum B str. Eklund 17B (NRP) plasmid p17BNRP, complete sequence	12987-13019	10	0.697
NZ_CP030775_2	2.1\|404892\|33\|NZ_CP030775\|CRISPRCasFinder	404892-404924	33	NC_010680	Clostridium botulinum B str. Eklund 17B (NRP) plasmid pCLL, complete sequence	47098-47130	10	0.697

1. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KJ776578 (Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence) position: , mismatch: 8, identity: 0.758

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
aaatgataatggaacatggtactacttagataa	Protospacer
*************** *****.**. .**   *

2. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KJ776580 (Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence) position: , mismatch: 8, identity: 0.758

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
aaatgataatggaacatggtactacttagataa	Protospacer
*************** *****.**. .**   *

3. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KT901798 (Clostridium botulinum strain GA0702E1CS plasmid pGA0702E1CS, complete sequence) position: , mismatch: 9, identity: 0.727

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattatctaaaccc	Protospacer
 **.********** ********** .*.  *

4. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KJ776585 (Clostridium botulinum strain DB2 plasmid pDB2, complete sequence) position: , mismatch: 9, identity: 0.727

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattatctaaatcc	Protospacer
 **.********** ********** .*.  *

5. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KJ776583 (Clostridium botulinum strain KapchunkaB3 plasmid pKAPB3, complete sequence) position: , mismatch: 9, identity: 0.727

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattatctaaatcc	Protospacer
 **.********** ********** .*.  *

6. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KJ776581 (Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence) position: , mismatch: 9, identity: 0.727

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattatttaaatcc	Protospacer
 **.********** ********** .*.  *

7. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KJ776579 (Clostridium botulinum strain KapchunkaB2 plasmid pKAPB2, complete sequence) position: , mismatch: 9, identity: 0.727

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattatctaaatcc	Protospacer
 **.********** ********** .*.  *

8. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_CP017255 (Clostridium taeniosporum strain 1/k plasmid pCt2, complete sequence) position: , mismatch: 10, identity: 0.697

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
aaatgataatggaatttggtactatatgtggtc	Protospacer
**************.******.***...  ..

9. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KT901798 (Clostridium botulinum strain GA0702E1CS plasmid pGA0702E1CS, complete sequence) position: , mismatch: 10, identity: 0.697

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattattttgattc	Protospacer
 **.********** ********** . *  .

10. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KJ776576 (Clostridium botulinum strain Eklund2B plasmid pEklund2B, complete sequence) position: , mismatch: 10, identity: 0.697

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattattttgattc	Protospacer
 **.********** ********** . *  .

11. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NZ_KJ776581 (Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence) position: , mismatch: 10, identity: 0.697

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattattttgattc	Protospacer
 **.********** ********** . *  .

12. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NC_018653 (Clostridium botulinum B str. Eklund 17B (NRP) plasmid p17BNRP, complete sequence) position: , mismatch: 10, identity: 0.697

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattattttgattc	Protospacer
 **.********** ********** . *  .

13. spacer 2.1|404892|33|NZ_CP030775|CRISPRCasFinder matches to NC_010680 (Clostridium botulinum B str. Eklund 17B (NRP) plasmid pCLL, complete sequence) position: , mismatch: 10, identity: 0.697

aaatgataatggaacttggtattatgcagcaca	CRISPR spacer
taacgataatggaaattggtattattttgattc	Protospacer
 **.********** ********** . *  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17209 : 28426

Paramecium_bursaria_Chlorella_virus(14.29%)

integrase

attL 6025:6040|attR 34902:34917

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6025:6040	attL	NA	NA	NA	NA
WP_113885949.1\|17209_19669_+	HAD-IC family P-type ATPase	M1HBF8	Paramecium_bursaria_Chlorella_virus	4.2e-34	25.7
WP_103673883.1\|19882_21913_+	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	3.1e-75	30.7
WP_002582896.1\|22096_22249_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_113885950.1\|22623_23790_-\|integrase	tyrosine-type recombinase/integrase	A0A0A8WIF9	Clostridium_phage	3.4e-42	32.7
WP_113885951.1\|24664_25417_-	helix-turn-helix domain-containing protein	I3VYY8	Thermoanaerobacterium_phage	6.1e-08	40.3
WP_113885952.1\|25580_25787_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_113885953.1\|25982_26276_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_113885954.1\|26380_26758_+	DNA replication protein	A0A0K0MX39	Streptococcus_phage	1.5e-28	56.7
WP_113885955.1\|26724_27066_+	hypothetical protein	F7V9D5	Lactobacillus_virus	2.1e-16	50.6
WP_113885956.1\|27082_28426_+	AAA family ATPase	A0A2H4J8K1	uncultured_Caudovirales_phage	4.0e-18	24.4
34902:34917	attR	NA	NA	NA	NA

DBSCAN-SWA_2

232273 : 309734

Bacillus_phage(25.0%)

tRNA,bacteriocin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046058004.1\|232273_232558_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_002582502.1\|233485_234754_+	DNA polymerase III subunit alpha	A0A291AVS4	Streptomyces_phage	1.6e-82	39.1
WP_002582501.1\|234798_235617_+	LAGLIDADG family homing endonuclease	A7KV45	Bacillus_phage	1.1e-39	41.1
WP_113885980.1\|237084_237954_+	hypothetical protein	A7KV45	Bacillus_phage	3.0e-19	31.6
WP_113885981.1\|240045_241002_+	6-phosphofructokinase	NA	NA	NA	NA
WP_002582496.1\|241213_242635_+	pyruvate kinase	NA	NA	NA	NA
WP_002582495.1\|243145_243508_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_002582493.1\|243649_245014_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	3.3e-97	40.6
WP_113885982.1\|245313_246643_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.0e-22	30.5
WP_002582491.1\|246921_247242_-	hypothetical protein	NA	NA	NA	NA
WP_113885983.1\|247613_250796_+	S8 family serine peptidase	NA	NA	NA	NA
WP_002579879.1\|251449_252586_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_002582488.1\|252762_253287_+	hypothetical protein	NA	NA	NA	NA
WP_125390905.1\|253316_253844_+	hypothetical protein	NA	NA	NA	NA
WP_024040443.1\|254048_254507_+	hypothetical protein	NA	NA	NA	NA
WP_045144734.1\|254499_255843_+	ATP synthase subunit J	NA	NA	NA	NA
WP_002582484.1\|256053_256704_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_045144736.1\|257046_258453_+	DUF4118 domain-containing protein	A0A1V0SGX0	Hokovirus	6.9e-13	27.9
WP_003423311.1\|258484_259177_+	response regulator transcription factor	NA	NA	NA	NA
WP_002582481.1\|259271_259616_+	hypothetical protein	NA	NA	NA	NA
WP_113885984.1\|259689_260466_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_002582479.1\|260645_262448_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	6.9e-26	24.0
WP_045145120.1\|262450_264121_+	ABC transporter ATP-binding protein	F2Y352	Organic_Lake_phycodnavirus	1.4e-25	33.6
WP_002582477.1\|264230_264533_+	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA
WP_002582476.1\|264604_264976_+	YbaN family protein	NA	NA	NA	NA
WP_002582475.1\|265026_265719_+	DUF4405 domain-containing protein	NA	NA	NA	NA
WP_003423323.1\|265747_269905_+	NEAT domain-containing protein	NA	NA	NA	NA
WP_002582472.1\|270217_271045_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002582471.1\|271104_271791_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_113886474.1\|271787_271868_-	FMN-binding protein	NA	NA	NA	NA
WP_002582470.1\|272062_273073_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_002582469.1\|273164_274349_+	amidohydrolase	NA	NA	NA	NA
WP_002582467.1\|274610_275792_+	ATP-binding protein	NA	NA	NA	NA
WP_043852394.1\|275848_276559_+	response regulator transcription factor	NA	NA	NA	NA
WP_113885985.1\|277046_278489_+	diguanylate cyclase	A0A2D0WBV8	Bordetella_phage	6.4e-06	31.0
WP_002582464.1\|278764_279031_+	metal-sensing transcriptional repressor	NA	NA	NA	NA
WP_045143641.1\|279085_281542_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.3e-112	36.4
WP_002582462.1\|281594_281801_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_033127628.1\|281951_283157_-\|tRNA	alanyl-tRNA editing protein AlaX-L	NA	NA	NA	NA
WP_002582459.1\|283813_285079_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.4e-09	34.2
WP_033127629.1\|285221_286154_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_033127630.1\|286146_286932_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_003408488.1\|287664_288342_+	hydrolase	NA	NA	NA	NA
WP_002582455.1\|289009_290305_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_113885986.1\|290781_291348_+	signal peptidase I	NA	NA	NA	NA
WP_002582453.1\|291519_292086_+	signal peptidase I	NA	NA	NA	NA
WP_002582452.1\|292193_292742_+	signal peptidase I	NA	NA	NA	NA
WP_002582451.1\|292917_293136_+	DUF3006 domain-containing protein	NA	NA	NA	NA
WP_046057584.1\|293163_295293_+\|protease	ATP-dependent zinc metalloprotease FtsH	H8ZJI5	Ostreococcus_tauri_virus	8.8e-105	40.3
WP_046057583.1\|295546_297724_+	AAA family ATPase	A0A1V0SET7	Hokovirus	1.8e-07	24.1
WP_043852399.1\|298270_299089_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003408403.1\|299370_300030_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_002582446.1\|300016_300739_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.2e-34	40.0
WP_113885987.1\|301128_303183_+	M13 family peptidase	E3T4I7	Cafeteria_roenbergensis_virus	6.4e-44	26.1
WP_002582444.1\|303246_304422_-	cation transporter	NA	NA	NA	NA
WP_002582443.1\|304875_305760_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_002582442.1\|306109_306586_+	HD domain-containing protein	NA	NA	NA	NA
WP_002582441.1\|306692_307499_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	2.2e-24	32.6
WP_033127244.1\|307556_308369_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_113885988.1\|308741_309734_+\|transposase	IS1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

371758 : 381118

Clostridium_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_113886013.1\|371758_373165_+	ATP-binding protein	A0A1V0SGX0	Hokovirus	4.4e-12	24.5
WP_113886014.1\|373302_374124_+	conjugal transfer protein TraX	NA	NA	NA	NA
WP_003407043.1\|374412_374613_-	YvrJ family protein	NA	NA	NA	NA
WP_113886015.1\|374602_375211_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_113886016.1\|375404_375875_-	hypothetical protein	A0A2I6PE92	Staphylococcus_phage	1.1e-18	37.9
WP_113886017.1\|375922_376513_-	helix-turn-helix domain-containing protein	A0A0A7RTR3	Clostridium_phage	8.3e-21	42.5
WP_027636805.1\|376683_377001_+	phage antirepressor KilAC domain-containing protein	A0A090D834	Clostridium_phage	2.6e-21	55.1
WP_002582391.1\|377091_377244_+	hypothetical protein	NA	NA	NA	NA
WP_113886018.1\|377260_378295_+	DNA replication protein	A0A2H4JF78	uncultured_Caudovirales_phage	9.4e-44	36.5
WP_002582389.1\|378346_378565_-	DUF2922 domain-containing protein	NA	NA	NA	NA
WP_113886019.1\|378700_378925_-	DUF1659 domain-containing protein	NA	NA	NA	NA
WP_053360005.1\|379278_380178_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.3e-81	54.9
WP_003407113.1\|380431_381118_+	capsular polysaccharide biosynthesis protein	A0A1X9I5E1	Streptococcus_phage	2.9e-17	27.9

DBSCAN-SWA_4

1044141 : 1054233

Prochlorococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043852620.1\|1044141_1047888_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	4.2e-33	24.6
WP_002579500.1\|1048145_1048625_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.3e-27	43.7
WP_002579501.1\|1048624_1049332_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SLB8	Cyanophage	2.1e-47	44.8
WP_002579502.1\|1049439_1050852_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-55	32.8
WP_003428501.1\|1050943_1051948_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.2e-67	45.4
WP_003428500.1\|1051935_1052544_+	phosphoribosylglycinamide formyltransferase	R9S626	Prochlorococcus_phage	8.3e-24	37.5
WP_002579505.1\|1052724_1054233_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	1.8e-35	46.0

DBSCAN-SWA_5

1454912 : 1476611

Clostridium_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_113886160.1\|1454912_1456799_+	endonuclease MutS2	F2Y0V3	Organic_Lake_phycodnavirus	4.3e-18	26.0
WP_057087719.1\|1456885_1457224_+	hypothetical protein	NA	NA	NA	NA
WP_035763002.1\|1457469_1458459_+	sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein	NA	NA	NA	NA
WP_113886161.1\|1459519_1461097_-	recombinase family protein	A0A1L2BY67	Clostridium_phage	3.2e-83	35.8
WP_113886162.1\|1461173_1461632_-	hypothetical protein	A0A0A7RVV2	Clostridium_phage	3.3e-33	48.0
WP_113886163.1\|1461642_1462146_-	helix-turn-helix domain-containing protein	A0A2R2ZGJ3	Clostridioides_phage	4.0e-08	30.3
WP_113886164.1\|1462369_1462579_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_113886165.1\|1462591_1463323_+	Rha family transcriptional regulator	A0A2H4J8K8	uncultured_Caudovirales_phage	1.3e-15	43.3
WP_174255822.1\|1463384_1463549_+	hypothetical protein	NA	NA	NA	NA
WP_161214096.1\|1463610_1463769_+	hypothetical protein	NA	NA	NA	NA
WP_113886166.1\|1463902_1464091_+	hypothetical protein	A0A0A7RTR9	Clostridium_phage	3.5e-05	41.7
WP_113886167.1\|1464090_1464387_+	hypothetical protein	NA	NA	NA	NA
WP_174255823.1\|1464431_1464593_+	hypothetical protein	NA	NA	NA	NA
WP_113886168.1\|1464592_1466362_+	DNA repair protein	A0A2H4J9G9	uncultured_Caudovirales_phage	1.4e-10	28.8
WP_113886169.1\|1466362_1466560_+	hypothetical protein	NA	NA	NA	NA
WP_113886170.1\|1466641_1466875_+	hypothetical protein	NA	NA	NA	NA
WP_113886171.1\|1466878_1467217_+	hypothetical protein	NA	NA	NA	NA
WP_113886172.1\|1467216_1468164_+	phage recombination protein Bet	A0A1P8BKG8	Lactococcus_phage	1.0e-36	46.4
WP_113886173.1\|1468178_1468790_+	metal-dependent phosphohydrolase	A0A2H4J8L1	uncultured_Caudovirales_phage	1.4e-42	45.7
WP_113886174.1\|1468802_1469222_+	single-stranded DNA-binding protein	A0A0A8WIG9	Clostridium_phage	2.7e-18	39.4
WP_174255811.1\|1469300_1469477_+	hypothetical protein	A0A0A7S0P6	Clostridium_phage	9.4e-13	58.9
WP_174255848.1\|1469529_1470081_+	molybdopterin-guanine dinucleotide biosynthesis protein A	Q9ZXC2	Bacillus_phage	1.9e-22	37.1
WP_113886176.1\|1470064_1470376_+	hypothetical protein	NA	NA	NA	NA
WP_174255824.1\|1470335_1470638_+	hypothetical protein	NA	NA	NA	NA
WP_113886178.1\|1470640_1471291_+	hypothetical protein	NA	NA	NA	NA
WP_113886179.1\|1471319_1473917_+	DNA primase	A0A1S5RG58	Helicobacter_phage	3.9e-06	51.9
WP_113886180.1\|1473961_1474258_+	hypothetical protein	NA	NA	NA	NA
WP_113886181.1\|1474297_1474516_+	hypothetical protein	NA	NA	NA	NA
WP_113886182.1\|1474515_1474944_+	hypothetical protein	NA	NA	NA	NA
WP_113886183.1\|1474936_1475566_+	hypothetical protein	NA	NA	NA	NA
WP_156212520.1\|1476007_1476178_+	hypothetical protein	NA	NA	NA	NA
WP_035765120.1\|1476167_1476611_+	hypothetical protein	A0A0A8WIL5	Clostridium_phage	1.5e-19	39.5

DBSCAN-SWA_6

1701263 : 1763044

Clostridium_phage(38.46%)

portal,terminase,tail,integrase,capsid,plate,protease

attL 1690135:1690153|attR 1723952:1723970

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1690135:1690153	attL	NA	NA	NA	NA
WP_043852796.1\|1701263_1701806_+\|protease	collagenolytic protease	NA	NA	NA	NA
WP_043852797.1\|1702247_1703645_+	L,D-transpeptidase/peptidoglycan binding protein	NA	NA	NA	NA
WP_002580026.1\|1703708_1704311_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_002580027.1\|1704574_1705072_+	hypothetical protein	NA	NA	NA	NA
WP_002580028.1\|1705209_1706136_+	LD-carboxypeptidase	NA	NA	NA	NA
WP_002580029.1\|1706180_1707101_-	DMT family transporter	NA	NA	NA	NA
WP_002580030.1\|1707261_1707873_-	hypothetical protein	NA	NA	NA	NA
WP_002580031.1\|1708249_1709917_+	2-isopropylmalate synthase	NA	NA	NA	NA
WP_002580032.1\|1710019_1711081_+	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_002580033.1\|1711225_1712758_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_002580034.1\|1712947_1713997_+	M42 family metallopeptidase	NA	NA	NA	NA
WP_113886252.1\|1714037_1715132_-\|integrase	tyrosine-type recombinase/integrase	A0A2R2ZGM9	Clostridioides_phage	1.1e-18	27.2
WP_113886253.1\|1715417_1716803_-	DUF4041 domain-containing protein	X5JAC1	Clostridium_phage	1.8e-74	59.0
WP_113886254.1\|1716984_1717491_-	ImmA/IrrE family metallo-endopeptidase	Q8SBN1	Clostridium_phage	4.9e-22	37.7
WP_113886255.1\|1717508_1718045_-	helix-turn-helix domain-containing protein	A0A0S2SXM8	Bacillus_phage	2.9e-12	39.1
WP_070779805.1\|1718215_1718425_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_027636010.1\|1718472_1719168_+	ORF6C domain-containing protein	A0A2R2ZGW3	Clostridioides_phage	2.6e-37	40.7
WP_027636009.1\|1719180_1719465_+	hypothetical protein	NA	NA	NA	NA
WP_033127217.1\|1719493_1719694_+	hypothetical protein	NA	NA	NA	NA
WP_045144966.1\|1719710_1719953_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0K2CZ86	Paenibacillus_phage	2.9e-20	57.7
WP_174255813.1\|1720076_1720244_+	hypothetical protein	NA	NA	NA	NA
WP_080776179.1\|1720246_1720405_+	Spo0E family sporulation regulatory protein-aspartic acid phosphatase	NA	NA	NA	NA
WP_174255828.1\|1720528_1720669_+	hypothetical protein	NA	NA	NA	NA
WP_003432550.1\|1720717_1720885_+	hypothetical protein	NA	NA	NA	NA
WP_003432548.1\|1720897_1721569_+	ERF family protein	A0A0A7RVW0	Clostridium_phage	1.2e-31	51.2
WP_113886256.1\|1721587_1722499_+	DUF1351 domain-containing protein	NA	NA	NA	NA
WP_113886257.1\|1722512_1723235_+	hypothetical protein	A0A1Q1PW08	Staphylococcus_phage	5.2e-33	59.5
WP_052661655.1\|1723234_1723636_+	hypothetical protein	I2E8X6	Clostridium_phage	3.9e-14	38.8
WP_045144343.1\|1723622_1723928_+	hypothetical protein	NA	NA	NA	NA
WP_045144344.1\|1723963_1724365_+	hypothetical protein	NA	NA	NA	NA
1723952:1723970	attR	NA	NA	NA	NA
WP_045144345.1\|1724378_1725956_+	PcfJ domain-containing protein	A0A2H4J8D4	uncultured_Caudovirales_phage	4.0e-78	39.7
WP_045144346.1\|1725956_1727033_+	DUF3102 domain-containing protein	A0A2H4J025	uncultured_Caudovirales_phage	4.6e-17	43.4
WP_045144347.1\|1727033_1727309_+	hypothetical protein	NA	NA	NA	NA
WP_045144348.1\|1727324_1727630_+	hypothetical protein	NA	NA	NA	NA
WP_113886258.1\|1727720_1728236_+	hypothetical protein	A0A2K9V425	Faecalibacterium_phage	3.4e-34	49.0
WP_113886259.1\|1728471_1729191_+	hypothetical protein	A0A1L2BY85	Clostridium_phage	8.3e-31	38.2
WP_045144351.1\|1729241_1729958_+	hypothetical protein	A0A2H4J6H9	uncultured_Caudovirales_phage	9.4e-51	45.8
WP_045144352.1\|1729977_1730241_+	hypothetical protein	NA	NA	NA	NA
WP_045144353.1\|1730277_1730655_+	hypothetical protein	L0LC12	Bacillus_phage	4.0e-08	33.3
WP_045144354.1\|1730654_1730939_+	hypothetical protein	NA	NA	NA	NA
WP_002580215.1\|1731069_1731741_+	manganese catalase family protein	NA	NA	NA	NA
WP_045144355.1\|1732084_1732606_+	hypothetical protein	NA	NA	NA	NA
WP_045144356.1\|1732686_1733652_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_002581872.1\|1733942_1734119_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045144357.1\|1734583_1734775_+	hypothetical protein	NA	NA	NA	NA
WP_002581875.1\|1734764_1734938_+	hypothetical protein	NA	NA	NA	NA
WP_057088933.1\|1734975_1735959_+\|terminase	terminase small subunit	A0A0A7AR21	Bacillus_phage	5.6e-46	40.6
WP_045144359.1\|1735951_1737310_+\|terminase	PBSX family phage terminase large subunit	A0A0A7S0Q5	Clostridium_phage	2.9e-202	75.3
WP_045144360.1\|1737531_1739076_+\|portal	phage portal protein	D9ZNC8	Clostridium_phage	1.3e-137	51.7
WP_113886260.1\|1739088_1740855_+	exonuclease SbcC	A0A2H4J048	uncultured_Caudovirales_phage	3.3e-145	45.7
WP_002581880.1\|1740859_1741003_+	hypothetical protein	A0A2H4J726	uncultured_Caudovirales_phage	7.6e-13	78.0
WP_045144362.1\|1741195_1741516_+	hypothetical protein	NA	NA	NA	NA
WP_152629202.1\|1741493_1741802_+	hypothetical protein	NA	NA	NA	NA
WP_113886261.1\|1741932_1742559_+	phage scaffolding protein	A0A1Z1LZK8	Bacillus_phage	5.2e-13	35.2
WP_002581884.1\|1742587_1742992_+	hypothetical protein	NA	NA	NA	NA
WP_002581885.1\|1743008_1744064_+\|capsid	major capsid protein	D9ZND6	Clostridium_phage	1.3e-85	50.0
WP_045144365.1\|1744121_1744373_+	hypothetical protein	NA	NA	NA	NA
WP_003432470.1\|1744375_1744696_+	hypothetical protein	A0A2H4J040	uncultured_Caudovirales_phage	4.7e-26	56.4
WP_045144366.1\|1744695_1745079_+	hypothetical protein	A0A2H4J057	uncultured_Caudovirales_phage	2.8e-33	52.4
WP_002581889.1\|1745083_1745509_+	hypothetical protein	A0A2H4J736	uncultured_Caudovirales_phage	1.5e-24	44.8
WP_045144367.1\|1745512_1746334_+	hypothetical protein	A0A2H4J4Q0	uncultured_Caudovirales_phage	8.7e-85	54.2
WP_045144368.1\|1746349_1746583_+	hypothetical protein	J9QEB6	Clostridium_phage	1.6e-07	47.0
WP_045144369.1\|1746582_1748022_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A8WI77	Clostridium_phage	1.9e-111	46.0
WP_002581893.1\|1748039_1748459_+\|tail	phage tail tube protein	A0A2H4J032	uncultured_Caudovirales_phage	7.9e-42	60.3
WP_045144370.1\|1748491_1748986_+	hypothetical protein	J9QDX1	Clostridium_phage	1.6e-17	43.6
WP_045144385.1\|1749198_1752918_+\|tail	phage tail tape measure protein	A0A2H4J055	uncultured_Caudovirales_phage	3.9e-116	41.1
WP_052661657.1\|1752950_1753676_+	hypothetical protein	A0A2D1GPN7	Lactobacillus_phage	4.6e-21	50.0
WP_045144371.1\|1754044_1754527_+	hypothetical protein	NA	NA	NA	NA
WP_002581897.1\|1754540_1755518_+	hypothetical protein	A0A2H4J063	uncultured_Caudovirales_phage	2.2e-74	47.4
WP_045144372.1\|1755507_1755852_+	hypothetical protein	A0A0A8WFG6	Clostridium_phage	2.8e-13	40.5
WP_045144373.1\|1755844_1756282_+	DUF2634 domain-containing protein	A0A2H4J4Q8	uncultured_Caudovirales_phage	2.3e-23	43.4
WP_045144374.1\|1756288_1757416_+\|plate	baseplate J/gp47 family protein	A0A2H4J7K8	uncultured_Caudovirales_phage	7.8e-52	36.0
WP_080776160.1\|1757416_1759492_+	hypothetical protein	A0A0A7S1G0	Clostridium_phage	1.6e-26	57.9
WP_113886262.1\|1759492_1760110_+	DUF2313 domain-containing protein	A0A0A7RTU9	Clostridium_phage	7.3e-44	41.7
WP_045144376.1\|1761304_1761604_+	hypothetical protein	NA	NA	NA	NA
WP_174255829.1\|1761619_1761790_+	hypothetical protein	NA	NA	NA	NA
WP_045144377.1\|1762033_1763044_+	Ig-like domain-containing protein	A0A1L2BYA9	Clostridium_phage	1.8e-15	48.9

DBSCAN-SWA_7

2870819 : 2918053

Bacillus_phage(50.0%)

integrase,transposase,coat

attL 2870126:2870157|attR 2910087:2910118

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2870126:2870157	attL	NA	NA	NA	NA
WP_053359028.1\|2870819_2871410_-\|transposase	transposase	NA	NA	NA	NA
WP_052707853.1\|2871773_2872022_+	hypothetical protein	NA	NA	NA	NA
WP_046057911.1\|2872023_2872713_-	thioesterase	NA	NA	NA	NA
WP_113886405.1\|2872712_2873429_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_113886406.1\|2873702_2874491_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_046057908.1\|2874644_2875691_-	C39 family peptidase	NA	NA	NA	NA
WP_053359030.1\|2875719_2880819_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	1.6e-64	30.0
WP_052707852.1\|2880915_2881167_-	hypothetical protein	NA	NA	NA	NA
WP_046057905.1\|2881262_2883968_-	hypothetical protein	NA	NA	NA	NA
WP_046057904.1\|2883991_2885173_-	MFS transporter	NA	NA	NA	NA
WP_046057903.1\|2885204_2886050_-	L-histidine N(alpha)-methyltransferase	NA	NA	NA	NA
WP_046057902.1\|2886046_2887078_-	radical SAM protein	NA	NA	NA	NA
WP_082076430.1\|2887441_2888386_+	DMT family transporter	NA	NA	NA	NA
WP_053359033.1\|2890026_2890629_+	accessory gene regulator B family protein	NA	NA	NA	NA
WP_081043907.1\|2890588_2890708_+	cyclic lactone autoinducer peptide	NA	NA	NA	NA
WP_046057900.1\|2890683_2891928_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_174255840.1\|2891917_2892691_-	response regulator	NA	NA	NA	NA
WP_046057899.1\|2895673_2896576_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_046057898.1\|2896738_2897311_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_046057897.1\|2897393_2897636_-	hypothetical protein	NA	NA	NA	NA
WP_113886481.1\|2897868_2898995_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.7e-86	57.4
WP_046057895.1\|2899217_2899733_+	hypothetical protein	NA	NA	NA	NA
WP_046057894.1\|2899834_2900035_+	YvrJ family protein	NA	NA	NA	NA
WP_153739136.1\|2900387_2900525_-	hypothetical protein	NA	NA	NA	NA
WP_046057893.1\|2902128_2902515_-	hypothetical protein	NA	NA	NA	NA
WP_008423999.1\|2902640_2902805_-	hypothetical protein	NA	NA	NA	NA
WP_162836017.1\|2902964_2903138_+	hypothetical protein	NA	NA	NA	NA
WP_174255841.1\|2903195_2903372_+	hypothetical protein	NA	NA	NA	NA
WP_082076432.1\|2904119_2904386_+	hypothetical protein	NA	NA	NA	NA
WP_046057891.1\|2904387_2904738_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_083319660.1\|2905282_2905993_-\|integrase	tyrosine-type recombinase/integrase	A0A0E3T6D9	Bacillus_phage	1.1e-06	26.9
WP_046057889.1\|2905985_2906963_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_046058716.1\|2906962_2908846_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1P7Y2	Bacillus_phage	5.4e-05	26.7
WP_027637256.1\|2910478_2910826_-	hypothetical protein	NA	NA	NA	NA
2910087:2910118	attR	NA	NA	NA	NA
WP_046057886.1\|2910888_2911680_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_024040180.1\|2911692_2912385_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_002581927.1\|2912493_2913603_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	4.1e-37	35.8
WP_002581928.1\|2913639_2915415_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.4e-57	33.8
WP_003429235.1\|2915624_2916650_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA
WP_002581930.1\|2917006_2918053_+\|coat	CotS family spore coat protein	NA	NA	NA	NA

DBSCAN-SWA_8

3235659 : 3299751

Clostridium_phage(21.43%)

coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_113886453.1\|3235659_3236532_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_080630489.1\|3236685_3238017_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	7.4e-33	29.9
WP_002582266.1\|3238171_3238867_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-39	38.3
WP_002582267.1\|3239076_3239409_+	hypothetical protein	NA	NA	NA	NA
WP_043853358.1\|3239608_3240997_+	M28 family peptidase	NA	NA	NA	NA
WP_103673324.1\|3241056_3242158_-	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	2.8e-06	40.3
WP_043853359.1\|3242413_3245122_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_002582272.1\|3245466_3246000_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_002582273.1\|3246349_3247015_-	ComF family protein	NA	NA	NA	NA
WP_002582274.1\|3246987_3248004_-	hypothetical protein	NA	NA	NA	NA
WP_002582275.1\|3248019_3250317_-	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	4.2e-68	31.7
WP_003412570.1\|3250580_3251756_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.3e-153	67.9
WP_035764121.1\|3253131_3253560_-	hypothetical protein	NA	NA	NA	NA
WP_003429668.1\|3253736_3254261_+\|protease	spore protease YyaC	A0A0A8WIQ6	Clostridium_phage	3.9e-22	37.7
WP_002582279.1\|3254333_3255368_-	rod shape-determining protein	NA	NA	NA	NA
WP_002582280.1\|3255447_3255702_-	sporulation transcriptional regulator SpoIIID	M9Q261	Clostridium_phage	1.1e-17	57.3
WP_002582281.1\|3255858_3256620_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_002582282.1\|3257109_3258180_-	stage II sporulation protein D	Q2XU88	Pseudomonas_phage	1.2e-33	35.4
WP_003429670.1\|3258434_3259697_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_043853360.1\|3259719_3260361_-	hypothetical protein	NA	NA	NA	NA
WP_002582285.1\|3260617_3261019_-	ATP synthase F1 subunit epsilon	NA	NA	NA	NA
WP_002582286.1\|3261033_3262425_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_002582287.1\|3262441_3263290_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_002582288.1\|3263465_3264980_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_002582289.1\|3264990_3265530_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_002582290.1\|3265532_3266012_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_002582291.1\|3266063_3266279_-	ATP synthase F0 subunit C	NA	NA	NA	NA
WP_002582292.1\|3266310_3266991_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_002582293.1\|3267009_3267369_-	hypothetical protein	NA	NA	NA	NA
WP_002582294.1\|3268227_3269409_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_002582295.1\|3269644_3270793_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	9.8e-26	27.7
WP_002582296.1\|3270889_3271384_-	cytidine deaminase	A0A2H5BMD7	Streptomyces_phage	2.0e-15	39.8
WP_002582297.1\|3271402_3272032_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002582298.1\|3272170_3272620_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_002582299.1\|3272640_3273690_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.2e-46	38.0
WP_002582300.1\|3273708_3274296_-	hypothetical protein	NA	NA	NA	NA
WP_002582301.1\|3274410_3275493_-	peptide chain release factor 1	NA	NA	NA	NA
WP_035764129.1\|3275727_3277485_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_002582303.1\|3277506_3278094_-	thymidine kinase	A0A249XXF6	Clostridium_phage	9.4e-57	57.4
WP_002582304.1\|3278505_3278715_+	50S ribosomal protein L31	NA	NA	NA	NA
WP_113886454.1\|3278925_3280038_+	UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase	NA	NA	NA	NA
WP_002582306.1\|3280073_3281609_-	transcription termination factor Rho	NA	NA	NA	NA
WP_035764132.1\|3281891_3283499_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	8.6e-153	51.6
WP_003412658.1\|3283681_3283993_-	hypothetical protein	NA	NA	NA	NA
WP_002582309.1\|3284195_3284606_-	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_003412599.1\|3284653_3285643_-	DUF814 domain-containing protein	NA	NA	NA	NA
WP_003412575.1\|3285657_3286341_-	stage II sporulation protein R	NA	NA	NA	NA
WP_002582312.1\|3286416_3287259_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_113886455.1\|3287347_3289957_-	cyanophycin synthetase	NA	NA	NA	NA
WP_043853363.1\|3289959_3290775_-	cyanophycinase	NA	NA	NA	NA
WP_003429681.1\|3290904_3292467_-	DUF3794 domain-containing protein	NA	NA	NA	NA
WP_002582316.1\|3292844_3293087_-	hypothetical protein	NA	NA	NA	NA
WP_002582317.1\|3293375_3294239_-	sporulation peptidase YabG	NA	NA	NA	NA
WP_002582318.1\|3294384_3295383_-\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_002582319.1\|3295491_3296613_+	glycosyltransferase family 4 protein	A0A2K9VGK0	Pontimonas_phage	5.0e-06	40.3
WP_003429682.1\|3296772_3297807_-\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_174255846.1\|3297986_3298781_-\|coat	spore coat protein	NA	NA	NA	NA
WP_046057601.1\|3298734_3299751_-\|coat	CotS family spore coat protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP030776

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP030775

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection