CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027306	Streptomyces atratus strain SCSIO_ZH16 chromosome, complete genome	10 crisprs	WYL,c2c9_V-U4,csa3,RT,DEDDh,cas4,Cas9_archaeal,cas3,Cas14u_CAS-V,DinG	0	3	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027306_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_1

419333-419439

Orphan

Consensus_repeat	Method
GCTCGCCGGCCAGTTCGGCGCGCCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_1

>merge|NZ_CP027306|1|419333-419439|CRISPRCasFinder
GCTCGCCGGCCAGTTCGGCGCGCCAGAAGTCGCTGTGATCTCGTGCCGGGGCCGGGGCGGACGCCGGACGTGGTGCGGGTGGCTCGCCGGCCAGTTCGGCGCCCAGG

>NZ_CP027306|1|1|419333-419439|CRISPRCasFinder
GCTCGCCGGCCAGTTCGGCGCGCCAG	AAGTCGCTGTGATCTCGTGCCGGGGCCGGGGCGGACGCCGGACGTGGTGCGGGTG
GCTCGCCGGCCAGTTCGGCGCCCAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_114242549.1\|396080_398132_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|341282
NZ_CP027306.1\|WP_114242552.1\|401576_402599_-\|ornithine-cyclodeaminase	unknown	unknown	gnl\|CDD\|274871
NZ_CP027306.1\|WP_114242553.1\|402677_403463_+\|thioesterase	unknown	unknown	gnl\|CDD\|225749
NZ_CP027306.1\|WP_157986983.1\|421786_422971_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP027306.1\|WP_114242565.1\|430237_431524_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP027306.1\|WP_157986982.1\|412117_412381_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235564
NZ_CP027306.1\|WP_114242561.1\|424849_426463_-\|DUF885-family-protein	unknown	unknown	gnl\|CDD\|377577
NZ_CP027306.1\|WP_157986984.1\|432922_434410_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238423
NZ_CP027306.1\|WP_114242551.1\|399303_400986_-\|DUF885-domain-containing-protein	unknown	unknown	gnl\|CDD\|377577
NZ_CP027306.1\|WP_114242564.1\|428766_430017_+\|diaminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236437
NZ_CP027306.1\|WP_114242554.1\|403476_405780_-\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|376618
NZ_CP027306.1\|WP_114248765.1\|422967_423915_-\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|274872
NZ_CP027306.1\|WP_114242555.1\|405806_412121_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|237108
NZ_CP027306.1\|WP_114242563.1\|427810_428716_+\|cupin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|372651
NZ_CP027306.1\|WP_114242550.1\|398404_399037_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|173776
NZ_CP027306.1\|WP_114242548.1\|394759_396019_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP027306.1\|WP_114242557.1\|412386_415428_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|237108
NZ_CP027306.1\|WP_114242566.1\|431543_432299_+\|thioesterase	unknown	unknown	gnl\|CDD\|225749
NZ_CP027306.1\|WP_114242560.1\|423994_424840_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|335469
NZ_CP027306.1\|WP_114242562.1\|426626_427004_-\|MbtH-family-protein	unknown	unknown	gnl\|CDD\|377081

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_114242549.1\|396080_398132_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|341282	cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the adenylation domain of the Bacillus subtilis termination module (Surfactin domain, SrfA-C) which recognizes a specific amino acid building block, which is then activated and transferred to the terminal thiol of the 4'-phosphopantetheine (Ppan) arm of the downstream peptidyl carrier protein (PCP) domain.	0
NZ_CP027306.1\|WP_114242552.1\|401576_402599_-\|ornithine-cyclodeaminase	gnl\|CDD\|274871	TIGR03944, ornithine_cyclodeaminase, 2,3-diaminopropionate biosynthesis protein SbnB. Members of this protein family are probable NAD-dependent dehydrogenases related to the alanine dehydrogenase of Archaeoglobus fulgidus (see TIGR02371, PDB structure 1OMO and ) and more distantly to ornithine cyclodeaminase. Members include the staphylobactin biosynthesis protein SbnB and tend to occur in contexts suggesting non-ribosomal peptide synthesis, always adjacent to (occasionally fused with) a pyridoxal phosphate-dependent enzyme, SbnA. The pair appears to provide 2,3-diaminopropionate for biosynthesis of siderophores or other secondary metabolites. [Cellular processes, Biosynthesis of natural products].	1.42488e-52
NZ_CP027306.1\|WP_114242553.1\|402677_403463_+\|thioesterase	gnl\|CDD\|225749	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	3.50787e-39
NZ_CP027306.1\|WP_157986983.1\|421786_422971_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.2026e-78
NZ_CP027306.1\|WP_114242565.1\|430237_431524_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.74843e-59
NZ_CP027306.1\|WP_157986982.1\|412117_412381_-\|hypothetical-protein	gnl\|CDD\|235564	PRK05691, PRK05691, peptide synthase; Validated.	2.0359e-15
NZ_CP027306.1\|WP_114242561.1\|424849_426463_-\|DUF885-family-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	1.68211e-33
NZ_CP027306.1\|WP_157986984.1\|432922_434410_-\|hypothetical-protein	gnl\|CDD\|238423	cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.	6.86247e-37
NZ_CP027306.1\|WP_114242551.1\|399303_400986_-\|DUF885-domain-containing-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	5.83849e-144
NZ_CP027306.1\|WP_114242564.1\|428766_430017_+\|diaminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236437	PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP027306.1\|WP_114242554.1\|403476_405780_-\|penicillin-acylase-family-protein	gnl\|CDD\|376618	pfam01804, Penicil_amidase, Penicillin amidase. Penicillin amidase or penicillin acylase EC:3.5.1.11 catalyzes the hydrolysis of benzylpenicillin to phenylacetic acid and 6-aminopenicillanic acid (6-APA) a key intermediate in the the synthesis of penicillins. Also in the family is cephalosporin acylase and aculeacin A acylase which are involved in the synthesis of related peptide antibiotics.	2.94792e-105
NZ_CP027306.1\|WP_114248765.1\|422967_423915_-\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|274872	TIGR03945, cysteine_synthase, 2,3-diaminopropionate biosynthesis protein SbnA. Members of this family include SbnA, a protein of the staphyloferrin B biosynthesis operon of Staphylococcus aureus. SbnA and SbnB together appear to synthesize 2,3-diaminopropionate, a precursor of certain siderophores and other secondary metabolites. SbnA is a pyridoxal phosphate-dependent enzyme. [Cellular processes, Biosynthesis of natural products].	3.42692e-132
NZ_CP027306.1\|WP_114242555.1\|405806_412121_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP027306.1\|WP_114242563.1\|427810_428716_+\|cupin-like-domain-containing-protein	gnl\|CDD\|372651	pfam13621, Cupin_8, Cupin-like domain. This cupin like domain shares similarity to the JmjC domain.	6.56871e-34
NZ_CP027306.1\|WP_114242550.1\|398404_399037_-\|ATP-dependent-endonuclease	gnl\|CDD\|173776	cd01026, TOPRIM_OLD, TOPRIM_OLD: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in bacterial and archaeal nucleases of the OLD (overcome lysogenization defect) family. The bacteriophage P2 OLD protein, which has DNase as well as RNase activity, consists of an N-terminal ABC-type ATPase domain and a C-terminal Toprim domain; the nuclease activity of OLD is stimulated by ATP, though the ATPase activity is not DNA-dependent. Functional details on OLD are scant and further experimentation is required to define the relationship between the ATPase and Toprim nuclease domains. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general acid in strand cleavage by nucleases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.	9.07444e-06
NZ_CP027306.1\|WP_114242548.1\|394759_396019_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.36636e-67
NZ_CP027306.1\|WP_114242557.1\|412386_415428_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	8.51339e-177
NZ_CP027306.1\|WP_114242566.1\|431543_432299_+\|thioesterase	gnl\|CDD\|225749	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	3.61294e-74
NZ_CP027306.1\|WP_114242560.1\|423994_424840_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	8.48878e-55
NZ_CP027306.1\|WP_114242562.1\|426626_427004_-\|MbtH-family-protein	gnl\|CDD\|377081	pfam03621, MbtH, MbtH-like protein. This domain is found in the MbtH protein as well as at the N-terminus of the antibiotic synthesis protein NIKP1. MbtH and its homologs were first noted in gene clusters involved in non-ribosomal peptides and other secondary metabolites by Quadri et al. This domain is about 70 amino acids long and contains 3 fully conserved tryptophan residues. The structure of the PA2412 protein shows it adopts a beta-beta-beta-alpha-alpha topology with the short C-terminal helix forming the tip of an overall arrowhead shape. MbtH proteins have been shown to be required for the synthesis of antibiotics, siderophores and glycopeptidolipids.	6.52841e-26

>NZ_CP027306.1|WP_114242557.1|412386_415428_-|amino-acid-adenylation-domain-containing-protein
MTESVVSPVLSRFASCHKENPGAPAVVADGVTTTYAELDTVARGHAAALRAAGAGRETVVALVADRGPGYVAMVLGVLLAGAAFVPVEPSVPVRRAHQMCAAAGVRALLVAPGHEEFAAQVAQGLDPVPKVLVDAAGPGEPAPVPDRPRDGLAYVIFTSGSTGTPKGAMVADGGMDNHIAAKLADLDLGPADAIGLTAPLSFDISVWQTLTALTVGARVAVASPRNIAEPAELVAWVRRHGVTVLEIVPSFLAVLTAQLDDDLRAGLSSLRYLVATGEALPGAVARRWYEHCPDIPIVNAYGPTECSDDVTHHVVTVAQSAARPWPSIGREILNTRLYVVDEDGREVPTGTEGELLVGGDGVGRGYIGDPVRTALAFVPDALSGTPGARLYRTADRASRAADGTIDFHGRRDRQVKIRGHRVELGDVEAELLRVPEVRSAACVHTAGRLRAFVTLNAQTDVLLAMRAAAPQYLVPHEVTVLDRLPVNTSGKVDHRALEGMRIEDVAPAPAEATTLDAVCAVVAETLGAASAGPDDDFFTSGGDSLLAMTLVSTARARFDAEGTSLRAFLSRPTPRGLLAAIEAAEPAVTEEEPRAVGALSSGQERLWFFEQLHRKKAPNLLILSLDLRGRLDLDALRHALAAVAARHEPLRTVFTQERGVPKAVVWPKAEMVLETGTLGDFEISARTPEPPLTTVRLARVADDHHVLTFAMHHLVADGWSLEVLKRDIAEHYERWLVGATDVPLPRTSFSGYVAAEREWLAGAEAEECARYWTEQLDGAPPAIDLPLDRPRPAKPAFVTDHVVTHLTPTETRAVAEAARARGATPFMAVLAASYVVLRDATSATDLVLGIDSVNRSWPGSEELIGTFVNQLPVRLAPGAAPTFGELLDLARRQVLGAQEHDRLPFHKLVAAVNPPRKAGRFPLFQVKITHQGAWRTGVSLADLEVVPRELADPVMDLDLMIDVSGESDRLRLEVLFWPEVLDSATVTGWAWALADVLRAGAANPHAVLALGER
>NZ_CP027306.1|WP_157986982.1|412117_412381_-|hypothetical-protein
MSTQDQVAAVWRELLEVDTVAVDEDFFELGGHSMLAVQVLYRLTELTGVELELEDFFELGTVAEVAAELDRLRAGRPAAEPVFEGEL
>NZ_CP027306.1|WP_114242555.1|405806_412121_-|amino-acid-adenylation-domain-containing-protein
MSAQDLLRRLDDLGVALTLADDRIRYRVRGDALPPELLAEMKRHRDELVDLIGRRERLTWPPVSAGDTGPLTAPQRSLWATTYFAEDGTYNLCGALRLRGPLDTDAFVTALRDIHERHPSLRTVFPVTGGEPQQRILPTVEPPLTVTEAAGLDECVAECARLADRPLALDTAPPVAMHLFRLAAEDHVFFFVLHHVIADGPSFGPMLDDLASCYGSRVAGQEPPAAGATVDMVGYARWETERLAHADLAAARRYWRERLDDASLGALPLPPPLDGAAAERGHAHHVVVPADTTTALRRLAEKTRSGLFTVVSTAVAVALSRYTGRDDLVVGMPTSRRDRAGLERVVGLLLDMVPVRLDVSSAPFADLVRRTRTAVLGAVRNAPVPADVAGSGVPFNVILTDLGAKLPAPVFPGLAIEHVEVEQVGAKYSLNFLVRDNGDTLTVDIEADRGAVADADVAAIAATAVSVLTAAVADPAVPVTALAVGPFGTAAPGAVAEPDRVPRADESLTGRLAETARTRSDAVAVTAPDGALSYTDLQARVEETAGGLRARGVQAGDVVAISLPRGLDLVVAILGVMASGGACLVLHESWPEARVSDVLTDSGARLTITEDDTVPRERATLAELASGRAPLVPVPAHAAAYVIYTSGSTGRPKGVRVTHHNVLSLLDATAGGYGLGPDDVWTLFHACSFDVSMYEMFGCLLHGGRLVVVPQLTTWEPEEFAELCARERVTVLSQTPSALTVMLPALAARPDSTEHIRYVLFAGEALDRRLVERWYEAVGDRTQLVNMYGITETTVHASWRWLRPDDARTAESDIGTPLPGTALHVLHDDGTPVADRCVGEIYVGGPQVSDGYLGRPRETALRFLPDPFSHVPGARMYRSGDLARRNGTTLAYLGRRDRQVQVNGFRVELAEIERALSTQPGVAAAGAAVTTDDSGAHLVAVVVPATDATPEPAELLAAVRSTLPRYMVPRTVVAVDALPLTTNGKLDRAAVVAAAATATATVSEGGAVPTGVREAVLLDVFREVLADPVVTTTTDFFDGGGDSMRAIRLVGLAKDRGLGLTVQDVYAARTVTALALRADEAGETAVGHEPFTLLPTESTFPPDVVDAFPMTALQSGMIYHQEMAPGARIYHIMLSYRVRGVMDPAAFRAAAQAVTDAHPVLRTSFDLANELGPVQRVHTGITVPIEFEDLTRLGADEQQERIRQVVARETATDFDLSAPPLFRLVVLTTSAADYQLIFTHHHAILDGWSVNIFFEDLQAQYRALLAAGSAPPLPRPRTTFGDYVALEQHAAADEGHREFWTARTAAQARLIAPERSGAPVMRQFHADFTGQLDALRATAARLGVPVKALLCASHLRVVSWLTGADDVATSSVVACRPETQDSDRVLGLFLNQLPLRVALAGQTWAELAVRAHEEEQAMMRHRWYPNAAIQAAYGAVPMFDSSFNFTDYHNTRRMVRDGSLELLDVDELESTHYAYSSAFTVDVRAHELRLLMEYDASALPESTLVLAAEVHRRALAAIVAAPERPFRDTPLPGIADLARLMGSGRPPAPATAAVAAAPAAVPDAVAPVAPAPAPSGSPLETSVREVWTEVLGITDIDATTSFFDAGGDSLTAMQVVSRLRARHGTLSMRAFMAASTIAGLANALDGAAAPAPSAVVPTPPETVTRHPLSLAQRQMWEIANQLPGVGLFGMAGALRADGPLDRALLERTFAELATRHEALRTRIEDTGDGPVQVVEPHVTITVDVEDLTADEHPARRCEKLMAAAARDPLPLDQAPLMRVVVHRLAADRHVIYLNIHHIVCDGWSLTLLLSDAARIYRELAADGAPAPRQVPRGSGRLAKDRADWLATGEAARQREFWIDRLTPPWPALADEPDSRFAELGTASFVQRLRSASTRATLPADDMRTVRAAARKHGMTDFMLVLGAYAATLRAWSGQDDIRVATMLANRVEPGLDEVVGLVANTVVLRMQLDDADPVAVSRQAREVCVAALDNQELPFEEVLAEIRERHPDAGPVFEAMLVAQEETAAVTPEDGLVFAPYQSERDVLGARVVATASDFVVGIAPVGGELLFELRYKPATTSKELATELLTAITTAVRATATALLETS
>NZ_CP027306.1|WP_114242554.1|403476_405780_-|penicillin-acylase-family-protein
MRRLWLLPTARVVGAASVATVVLAGGLLAWPWVSAAVVAAGAAGIAGYVHRNRGRVAVELRMLRALKDSVPRCPDDVEVPTLTAPVRVGSGDDGVTRITAQTYHDAVCALGHAMGRDRGFQLDLMRRTGSGRLAEVWGRAAVASDTEYRRLGLAEAARTATEQLAEPERELLTAFADGVNAAFAQATPFECRFLSYRPQPWRVEDSVLTSLLLFHSLSWNEQAKRAEAVVRRALPASVADFFLPGDATSARPADLARHRGEAGAADLIALDRAVAGSNCWIAKGDEPLLACDLHLALGLPNVLYEVDLAWPGTRLRGLASPGLPVVLTGTNGRIAWGVTNLTADVLDLVPAGQDGLHTRTERIRVRGGKPVTVDITTDGTMPVSESPLCGEKVAIRWTGHDPRAADLRFHRLAHARNLDEAVAVLDDAHGVALNVLVTDRKRMAHLATGLLPRRPAGTSRTEPADGHLTGPERPRVVDPTDGILVSANEAALPEDEFRIGLDLDPGHRARRIRTVLSAAERHDAAGMHALQHDVTAELYLPYRDLAIAALRPTDPVRSLLREWDGTAATDSRAFGVLVRLREALAQRVLAPYLAVCREHEPAFRYPFRDLDRPLLAILHARDCALLPAGTTDVDGFVADCVRAVVRERPAKWGRLNRVGLGHPFAALAPWANAVLGLRARQQAGMLHSVRTAVPGFGAAGRVVVTAGDLVTAELPAGQSGHPLSPHYADRHARWASLPSSSRPRARRTGCDHELRPHLTALREVDPN
>NZ_CP027306.1|WP_114242553.1|402677_403463_+|thioesterase
MTDPQPRPKRPPRWLLRRPDPNAPARLFLFPYSGCGASMYQAWPRRIGAIDVCLIQPPARQNRIADPHYGTYENMAQGLVEYLRPYLDRPFAFFGHCGGALPGVEVTRQLAAAGLPLPSRVFVSAQVAPHDGPYGRLLELDRYGLRTELEHIITNLGGEPSGPLVETGLEVLVNDIEANKRYSPGHITIPAGVTAIGWSEDPEIPMKLMGGWQNTSADCRFVELSGGHFEFLSAPEALLAEFRRDFGEAAEVPAEQGESIS
>NZ_CP027306.1|WP_114242552.1|401576_402599_-|ornithine-cyclodeaminase
MQDLSTPLRYLDGATVASLCARIDPLEVVTEAFLGVRAGRSAVAPETALRWTAPDGTAARSLILPARHEGTYGCKIINACLGNLDRGLPRAAGLILLYDRETAAPVCIMEGAHISALRTAAVSLAALRAVRPLSTVDRMALLGCGRQARTHLDLLVARGAVKSVIAYDLSPSRAAAFAEELRESLPEIEVETVAEPELAVRSAPVTLATTTTTTSYVPLAWLPGGSVFLNVSLDDAAEDVLLGAEHLFVDDWHLVSEDDTRLLGRLAQAGRATAPGTTAPGARQVDADLATLLSGTYSRPITATDRTVINPFGMGVHDVALATRVYATARDADTGVLLPR
>NZ_CP027306.1|WP_114242551.1|399303_400986_-|DUF885-domain-containing-protein
MVRDVADAYVEGLARLDPDTATYLGVPVGQDEMPDLSPEGRAALDDLSRATLLDLDRAERTTGPLSNVERRCGRLLRERLEADLAISTDDEYLREIVNVYGLQQRVQDIFQMMSTDTADDWASVAKRMSRVPETLGGHREALTRALEKDCFVAAPTQVRVVADQLDAWARDSGGRGWYAGFCANADVPPPLRSQLDKSASVAGAAVAELRDWLRGDYLPKVEARPDGVGADRYRTWARFWTGAELDLRETYAWGWGEYRRIRTEMRTEAERVRPGATVREAMRHLDQHGERVEGVEEIRMRLQGWMDEALDDLDGKYFELAPLVRVVEAAIAPAGSGAAAYYTPPSVDFSRPGRTWLPTQGRTRFPLWSLRSVWYHEGVPGHHLQLAQWRHLADQLSTYQTTLGGIDACTEGWAMYAERLMDELGYLPTPGDRLGFLDWQMLRAIRVLIDIGMHLALDIPEDAPVGAGQAWTPELAKEFLAIHSGQTTEFVDSEIGRYLGLPGQAISYKLGERAWLDGRAAARAAHAARGEELDMKSWHTAALSLGPLGLDDLQDELAGL
>NZ_CP027306.1|WP_114242550.1|398404_399037_-|ATP-dependent-endonuclease
MADMTSFREAVTAWAAGGPGGDLARELASELAEQLPVRTAVLLEGPSDVNAVNALAASHGRDLAAEGVCVLAMGGAMSVGRFAQFFGPPGLGLRLTGLCDERERDYYVRGWERAGADQQDFFVCAADLEDELIRALGVDLVKELIRVEGDLRPLETFLRQPAQRNRTAQQQLRRFFGTKKGRKIHYGRVLVEALTPDRVPPPLSGLFAIL
>NZ_CP027306.1|WP_114242549.1|396080_398132_-|amino-acid-adenylation-domain-containing-protein
MSNLLEDQDGTYRVVVNAENQHALWPEFADVPAGWDTAFGPAGRAECLDYVEVNWSTMTPTSLAAQLDQADRGRATKDNATTRLGDTITEQFAEQVRRRADATALRFRGEGLTYAELDERADRLARRLRGLGVGEESVVGVCFERSFEMVIALVAILKAGGAYLPVHPTEPQERFCYMLGRAGAQVLLTHGPLIDRIPEVDATVVNVDDPVEPTSIDADLPAPRAAADSLAYVCYTSGSTGQPKGVSVTHQGVCRLVRDGDYADFGPDETFLQLCALTFDPATFEIWGALLNGGRLVIHEPGTLSLPDLAECIKREGVSTLWLTTGLFHRMVDGHLDDLVGLRQLLAGGDVLSPAHINRVRQAHPHVRLVNGYGPTENTCFTTCHNVQEPVGETVPIGRAITGTRVYVLDEKLRPVPDGEWGQLYTAGEGLARGYLGDARKTAQQFLPDLSRSGERMYSVGDVVRVGADGALEFRGRSDDQVKVGGYRVELGEIVAALAGQPGVKEAVVIIRQDGPGGEKALVAYVVPEGDDETLVPDLRVALRERLPRHMNPAAIVVMGRFPLTRNGKIDRAALPAPDLVPREVDSEYEAPRTPVEGLLADLVADALGVEQVGVHDDFFELGGNSLIATDLLSQIRKALAVDVPATRLFFENPTVAGLAELVETTTAAAPAENAAENEQAAT
>NZ_CP027306.1|WP_114242548.1|394759_396019_-|cytochrome-P450
MKLTRPAEQEPVDLEKVDLVDPAVHGEGDPHAIWHAMREREPVHWQQVDERLGYWSATTYDDVARVLKDHRVFTSEHGTLLNLLGKKDPASRKQLPATDPPRHTKMRSPVQRALNSKVLERHRPQIHDEVKRLLDGVPDGEAFDFAEVVGALPMAVTGTLMGLDRDDWPQLTYLTSQAIAPDDPEFIMPEGGEATLQRAHRELFAAFEQSMSRRKGEGDGDLIDVLRTMEMDDGRKLRPSEIVSNCYSLLLGANVTTPHVPNAAMGELAKDDKYADWAAHPELFDSGINEALRWSSPASHFLRYAKTDVELSGVTIRQGEPVAAWIGSANRDSSVFPDPYEFDIRRDPRNHLAFGVGPHYCVGHAVARIALHELFQELLDQFSGFEPTGEPQHLHSNFIAGMKHLPLVATRRTEGRARV
>NZ_CP027306.1|WP_157986983.1|421786_422971_-|cytochrome-P450
MTTSVWTPPPADETALADWLRARDPIERAPGGGGWHVFGYREVKEVLANHGAFSNAVVRPVPDDSPMRLYREGNLTWMDPPRHRQLRALVSQVFTPRYVAGLEPMIHETVETFLTGIRRNAEVSFVREFASPVVATVIARMVGIPGNGLRLFQEWSQALLALADPGAEQNGLQTVLTKTQIAEAFLHRFIAKRRAAPADDLTSGLIAAEVDGERLGDDEIAGLVALLMSTGQAATLTLVNAIIVLARHPQSLAMLQTRPELLNSAIDEVMRYRSETTRVERKTTRDVVVGGHEIPAGQTVSVWIAAANRDPRVFDGPDVFDIERSTNPHIAFGHGIHYCLGAPLARVEIRIALRRLLDSTVDFAVDPAGTRLLDPRLMFGASEAAVRFDWKEEQ
>NZ_CP027306.1|WP_114248765.1|422967_423915_-|pyridoxal-phosphate-dependent-enzyme
MLRDLPKTRVVRLPYPGIRLYAKMESENRTGSAKDRAAIWILREAVRRGEITRNTTVVESSSGNFALSLASFLNALNVPFVPVLDPNVNAATERTLRRLCARVEKVTEPDGTGGYLLSRLTRVAELRAELPDVYWPDQYTNPDGARGHYELTAGELLADVGRVDYLFVGVGTGATINGLSHRLGVEQPDATVVAVDVEGSAIFGAPPARRLIPGIGSSIRPPLVDAAWISKVVVLSERDEVAGCRALLRDHGIYAGGSTGCVYAAITHHFDGHSGREPVVAFLCADNGEPYADTVYADDWVAEHLTPVATKGACA
>NZ_CP027306.1|WP_114242560.1|423994_424840_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MTEVTAEVMPAEAFPADYWATIPGGPFTMGSNERRDDGKLRAAAPEHQIDVPEFRIAKSPVTVREFRKFVEATGYVTTAEKVGKSWVWIGDPAVVVPDQDYLWKAIDGATWRTPRGADSTVEGKDDHPVTHVSYDDCLAYCEWSGTRLPNEAEWEKAARGTDGRAYPWGNEEPTSEHCNHSMGVGDTTPVGAYPKAAGPYGVEDIVGNVWEIMSNGFHHYPFDESKPRRVIKTRVGTIELGVIRGGSFYNNCDPRGCLAWVRIYNLPDYSCHDMGFRVCAC
>NZ_CP027306.1|WP_114242561.1|424849_426463_-|DUF885-family-protein
MTSGALSSVSAVVDYVFDRYPQVARRAGRHDFDGQLPEVAPDSLSDVDGLLAAVSGQLDALPEDADPEVRADLGTAMRVLTDERFRIAELGRSHRGPDEWLAETGVHIYLRGEYASLDERVAALSHHLAQLPDFLAATAKTLGRTLPAGERISGVENARARAVSVRDLVEQLVAERPESADSSLMELAGRASAAFVGFAGAVAATQPARAVLGPDLLAAYLEAAEGVDTPVAELLAEVEAEVESLVARLDALSARLGVRTRQEAYDLLSARVPAGSVVSTLSRIIDRLQGFWVEQDVVTMTSRQGLDIRPVRDASTSAAVVFDVGGPLERAPQPHVLHVPEPRDPAALRDYLNEPMLEMIAVHEVFPGHYLHHETTSEHAGAIRRCVPWFPGVTEGWAHYTEELAIERGLAEGRPLVEVAALRFALEAATRLLVFLSVHSGRSKFGAAAAEAATLCAWSPERAGREVLAVAAQPAGAMYTLGKLRIRRWRELAGVSDSAADLKAFHDRVVRCGSAPLSTVWRYYLDGRYVPAASTTK
>NZ_CP027306.1|WP_114242562.1|426626_427004_-|MbtH-family-protein
MFDDENAEYLVVINGEDQYSIWPASRDLPAGWTAVGGPRSRKECLDHIARVWTDMRPKSVREAIENAGSLIAQGSRMVLSQLVDADELKAMSPEELRDMLASLDDDVIYGEDGDVIEPNPGAETA
>NZ_CP027306.1|WP_114242563.1|427810_428716_+|cupin-like-domain-containing-protein
MSVTTTAQPVSVDVRTKLSPEEFHAEYMGRRPVVMRGAVADMPAVSTWSAAHLAEVAPDQQVRVKVGTVSAGRTAVVRLADYAREVAEWETGVAGDDDPGDPPGYLHDVPLLSMIPALRRDLEPFPVEYFPRFFRDQWWSFTQFFVGPSRAQTPLHFDTLLTHNLFFQMQGSKRFVMVADAERDKCYTYNWRWAAVDPEAPDLERYPLFRDATVLTCDVEAGDIFYMPPGTLHKVTSPSASISFNIDWHDRASALRGIAAVREGMPLTNLRYNLLFALGVVAGAPRGLLMPGLRSYYSYIS
>NZ_CP027306.1|WP_114242564.1|428766_430017_+|diaminobutyrate--2-oxoglutarate-transaminase
MSIFEQHESGVRSYSRRWPVVFSRATGSRLHTEDGRRWLDYFAGAGSLNYGHNNPVLKRALLDYVENDGITNALDMFTSARRDLLETLVEVVLRPRSMDHKVVFPGPGGANAVEAALKLARTVTGRSGVVHFTNSFHGATLGALAVTGNPLHRRSAGVPLTGATPMPFDGHDEHPHPEHLARLLAGPGSGLDLPAAVIVETVQAEGGMNVASTEWLRALAELCRQHEILLIVDDVQVGCGRTGPFFSFEDAGIVPDLICLSKSIGGYGLPLALLLVRPDLDVWPPGAHSGTFRGVNPAFVTATEALRTYWRDDTLEKSTRARGEWVGTALQGIVNAHPGAGLSTRGRGLVHGLVVGAELADAVSDEAFAQGLLVETSGPRDEVVKLLPPLTVSDAELAEGLAILEESVRVVLERAA
>NZ_CP027306.1|WP_114242565.1|430237_431524_+|MFS-transporter
MAQGKDSGRRRALAEALAPFSIREFRVLWTGQAVSAAGGGMTKVALLFAVLAVDGSVTDIGLVMTAQVTMQVLFTLAGGVWADRLPRQFLMLASDLIRAAAQLVLATLLLTGHAEVWHLIVGSAVFGAAQAFFGPASSGLMAEIVPPEQLQRSNALLSFCNSAFTVLSPALAGVVIALWGPGLVLAIDAVTFIVSAVSLGMLRLAPRTVPAPESFLGDLRTGWREFVIRPWLWLNLIAHMLQNLAVAAYYVLGPAIADKSLGGPSAWGAIVAGWAAGAIAGGFIALKLEPRRPLIVGNLALILTALPLLALAVPTPLWTVVGTAFLSGAATMFLDALWQASMQQMIPAEVLSRVDSYDWMLSTLAAPLGLALVGPLAAQTGNAQTLLIAAAMIVIPCGLTPLVPGIRAVRRSPDGVITGPPVKQPAQV
>NZ_CP027306.1|WP_114242566.1|431543_432299_+|thioesterase
MADEQSRWIRRYRAAPEAAVQLVCLPHAGGSASYYRPMAMALFPAVEVLAVQYPGRQDRVNEPYIGDFAELTERTLAAVRPELDRPVALFGHSMGALLAFEVAKRLEAEGIEPLALFASGGRPPGRPVRHAHTATDEELVSEIAALAGTDKRLLDSEDMRVLFLPALRGDYRMMGTYRFDGPRVACPVVSLTGDNDDLVSVDDAAAWAGHTTGRFDLHVFSGGHFYLADQWAGVGEVLTKSLGAHVPTGTG
>NZ_CP027306.1|WP_157986984.1|432922_434410_-|hypothetical-protein
MVIGASDSSMAIATARLAGPNPIPTTSTVLTLGSSTAVTYGAPLRPRSPSDAHIGQSVINSCPVRPGSAGGSYPQRRRFVKAHLRIIRTGERRGDQPAGGRTDVIVRTAARPRRPAVGVVRPGGLGQRRPHGLTSGLSVAKAEQTSLESDSFTPNTITAQGGCLVQWGDVYVRSCAMALGERELVEAAVAAGRYDPSIRDAHGYESISVAGSRYAADMAVDAARVAIARSAVDPADIGVFIHAYVDEQGPEGVAEPASYIQGMAHDGRARALGVRQGCNGAIASLEVGAMYVSAGSVAVLTSADKYVGEGDRYRDDQGCVPADGATAMVLGREDGVARLLATEIIGDGRFSGLTALDPGQFEDRQEFRKAQRKRVVSMMRTMTEAKHDCVRAALADAEVGAGDIRHWLLPYNGRFMVDRDFCAEFEIDDERTTWDLGRTVGHLSGGDPVVGLTHLLETGAAAVGDRVVMLGDSAGFAFGCAVLEIVAKPAWQVDR

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Crispr_ID: NZ_CP027306_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_2

640810-640886

Orphan

Consensus_repeat	Method
CCGCCCGGTCGGTCCCGGACTCACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_2

>merge|NZ_CP027306|2|640810-640886|CRISPRCasFinder
CCGCCCGGTCGGTCCCGGACTCACGGGCGCGCCTCTCACGATCGAGGCGCACCGCCCGGTCGGTCGCGGACTCACGG

>NZ_CP027306|2|2|640810-640886|CRISPRCasFinder
CCGCCCGGTCGGTCCCGGACTCACGG	GCGCGCCTCTCACGATCGAGGCGCA
CCGCCCGGTCGGTCGCGGACTCACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_157987005.1\|639263_639401_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114248781.1\|633152_634835_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP027306.1\|WP_114242699.1\|636042_636705_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP027306.1\|WP_114242709.1\|643011_643299_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114242708.1\|642397_642799_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_157987004.1\|637924_639049_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236138
NZ_CP027306.1\|WP_114242710.1\|643547_645155_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP027306.1\|WP_157987007.1\|639540_640650_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP027306.1\|WP_114242713.1\|647757_648786_-\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|187557
NZ_CP027306.1\|WP_114242707.1\|641842_642145_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114242700.1\|636768_637395_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP027306.1\|WP_114242705.1\|640947_641127_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_157987008.1\|641123_641291_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114242706.1\|641290_641605_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_157987006.1\|639403_639544_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114242712.1\|646763_647768_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|237195
NZ_CP027306.1\|WP_114242711.1\|644934_645630_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319971
NZ_CP027306.1\|WP_114248780.1\|631749_632502_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|223675
NZ_CP027306.1\|WP_114248782.1\|635038_635668_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_CP027306.1\|WP_114242698.1\|631135_631747_-\|GTP-cyclohydrolase-I	unknown	unknown	gnl\|CDD\|376498

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_114248781.1\|633152_634835_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.61607e-11
NZ_CP027306.1\|WP_114242712.1\|646763_647768_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|237195	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional.	3.00561e-62
NZ_CP027306.1\|WP_114242699.1\|636042_636705_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	6.38072e-13
NZ_CP027306.1\|WP_114242710.1\|643547_645155_-\|ISL3-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.67361e-18
NZ_CP027306.1\|WP_157987004.1\|637924_639049_-\|hypothetical-protein	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	1.81862e-07
NZ_CP027306.1\|WP_114242713.1\|647757_648786_-\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|187557	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs. This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.32166e-163
NZ_CP027306.1\|WP_157987007.1\|639540_640650_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	4.61328e-05
NZ_CP027306.1\|WP_114242700.1\|636768_637395_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.20756e-16
NZ_CP027306.1\|WP_114248782.1\|635038_635668_+\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	1.24393e-52
NZ_CP027306.1\|WP_114248780.1\|631749_632502_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|223675	COG0602, NrdG, Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones].	3.3532e-20
NZ_CP027306.1\|WP_114242711.1\|644934_645630_-\|hypothetical-protein	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	8.61728e-32
NZ_CP027306.1\|WP_114242698.1\|631135_631747_-\|GTP-cyclohydrolase-I	gnl\|CDD\|376498	pfam01227, GTP_cyclohydroI, GTP cyclohydrolase I. This family includes GTP cyclohydrolase enzymes and a family of related bacterial proteins.	5.81128e-76

>NZ_CP027306.1|WP_157987007.1|639540_640650_-|hypothetical-protein
MSAKGATMTTTNTPDYEQQPRIAGVRYRPVVRYRLETTTINGLPETREVPYTVMEPVPPRDWDALIIRGVTSVAIGVTALAVVSTATSIGGLLDKTVPAPIAYGVAVIFSATWLACQALEYVERLEPTRARNAQLAGWAALLISMSAVVMFGVDKNEPVAGAAGAAVDLMAKGLWTLVLGHYAVPLSEGVAHWLRRRREKITAAAAVAGQVRRLDQHEAYLTAVYGPTAATAQAVTTMVEAPALQGGPAVSGQTVSAPTPAPVPAVPVSAPAPVPPVSPAAASQEPAVPDPLAKPDHVGPDPVGPPALHAVGGPFKSDTIRAALAENPAITDDALIARVNAAHGEDPKNSDSVPRLRRRIESKAKKKAS
>NZ_CP027306.1|WP_157987006.1|639403_639544_-|hypothetical-protein
MIYLLMVNGLVGLAASLYGRDDDIRFIGGLAALLGLAAALLFPEAW
>NZ_CP027306.1|WP_157987005.1|639263_639401_-|hypothetical-protein
MGLALELAVGVVLWACARHEWTRAIGFFLALGAGLMLVLKAVGVQ
>NZ_CP027306.1|WP_157987004.1|637924_639049_-|hypothetical-protein
MTNSVRDTAEFLADVDELLAAVPGSVELPGPAPVEPQPPVESPIPPPPVEPPTPPPLAEPPAPAFAEPPVQPQTPAVPPAQESDVNVTPPPTADKGEDWWDQLYPEATAGTRDQTPPSDRVRRIPRNGWRPYGPSSVALDEAPADDETDDVAERADEPVKAPAAPVPLRVVKDEQPETAEDSKEAAEPETEDDASPADLTKPLPVSRVRLIATTVQEWRPPIGPRGRGWIRAVVYTGSGIVLGWLTGCTQAVYTTLDQLSVNPDAVGGIAISAAMAALLISRPKKTVDRPWLRPAPGPGRRVPDGPGLRRSHRHHCRVGPRPASPPHAPRHRLDHPRRLRFGPAGQFRPRLDDRRPLLHRSSAVSVFAGQFWPH
>NZ_CP027306.1|WP_114242700.1|636768_637395_+|class-I-SAM-dependent-methyltransferase
MSETRTAAELEQEAFVRRVLEDFYRDGKPPWDSGITPPELVALIEGPGALMPGQVLELGCGTGTNAVYLARHGWRVAAVDLVDRAVRQAREKADAAGADVTVLCGDATRLDEVGVPGPYDLFFDLSCYCGIPPHRRDAYAAGLTKRATPGARLLMFGYGPGAFDDSWSGVTADELSARFAGWQLADVTPGTNPVPTFWFTLRRGAASA
>NZ_CP027306.1|WP_114242699.1|636042_636705_-|TetR/AcrR-family-transcriptional-regulator
MDAVKGSDGQNVKRPDKRAERSRRTREKIVAAARELFVAQGYGATSLQEVADRAGVAVQTVYFVFRNKRALFKDVVDTSIAGDVEPVTTMDRDWFRAACAEPTAAGQLRAHVRGVRDILSRVAPIMPLIAAAAATDPEIAAQWPAGPDPRYSVQHAAAKALTSKPDARPDVDTARAADLLYGLLSPELYLIFVRNRGWSPDAWEAWACAALIAHLCTDHE
>NZ_CP027306.1|WP_114248782.1|635038_635668_+|ATP-binding-protein
MESECEDRDARRKVRRVKEANFPRPKRIEDFDFSKNANVPQEVINTLTQPAWVQAGNPLCLIGDSGTGKSHLLIGLGTAIAEAGGRVRYTTAANLVSELAEAASDKQLGRTIKKYGRVDLLCLDELGYVKLDRHGAELLFQIFTEREERHAIAIASNRPFTEWDQTFTDKRLCQAIVDRLTFEAHIIETGTQSFRLASTTAKRKAAAAA
>NZ_CP027306.1|WP_114248781.1|633152_634835_+|IS21-family-transposase
MSGGRVLQRVELFERIRRDRRLEDASVRSLARRYGVHRRVVRQALDSAVPPARKPIETRRSVLDQSKDWIDEMLRADLTAPPKQRHTNKRIMDRLRDEYGFPVAYSTLNDYLRVRRPQIREEAERSRMLTEGMVPQFHRPGEEAEVDFAEVWVRVDGKPMACQLFTLRLSYSGKAVHRVFSTSGQEAFMQGHVDAFRILGGVPTRHIRYDNLKPAVSQVCFGRSRVESQRWVAFRSHYGFDAFYCRPGIEGAHEKGGVEHEGGRFRRSHLVPVPEVDTLAELNEKIEQIEIAEDVRHIDNRPTSVGFDFDYEAPLLAPLPFEDFDIGLTLTPKVDKTSRITVRQNKYSVPARFIGTNVRVSLRADEVWVFERNELVVRHPRLAGRYGFRDLLDHYLEILRHKPGALEHSAGLAAARESGQFTETHDAFWAAARESRGRSEGTRALIEVLLLQRRLPDEAVIAGMKAVLEAGSVSPDLVAIEARKAVAAAGGPPPVVIAPPTIAATVAAEPDTAKPAEPGPDSAQVISLPQRRAVLPPDSRPEPSLAAYGQLLSIQPKGPA
>NZ_CP027306.1|WP_114248780.1|631749_632502_-|7-carboxy-7-deazaguanine-synthase-QueE
MVGATPAKGSALAKALGRAPNNAREVISVEDAGEGEVVALTTSTGNYIAEGWLVHNCDTPYTWDASRFDLRKELTRRPVPELVDRLLDGAPGIVVITGGEPLLHQRRPGWTALLDALTTAGVEIEVEANGTLVPSPYTAEHVTRFNVSPKLDHAGDPEDKRIRPEALAVLVATGRAAFKFVCRTPADVDQVAAHASTLGLPAHTVWVMPEGTTTAELDDRLRTIADPAIAAGFNLTTRLHVHAWGDERAR
>NZ_CP027306.1|WP_114242698.1|631135_631747_-|GTP-cyclohydrolase-I
MATTITPVSDAPAARRKTVQAYRQGLRSWLAGRGLDPDSPALTDTPDRVLRALEEMTAGYDEDPAEHLARVFPVDHDGGPIMVTGVPFTSLCEHNMLPFTGHADIAYQPRPGQPVAGLSKLPRVLDVYARRLQTQEQLTRQVTATLDTHLQPVGSACVIRSEHGCLAHRGARKPGSVMVTASYTGTFRDDPEARAELHRLMTG
>NZ_CP027306.1|WP_114242705.1|640947_641127_-|hypothetical-protein
MSDRTPRSNPIVDAPATPAACAQDRAGRDAEEQAGAARDQRADAGVQGQQAAGSPGGRR
>NZ_CP027306.1|WP_157987008.1|641123_641291_-|hypothetical-protein
MPQEQSPEVAELHRQCAQDYREAAPQRVQAGVQAADATAAGHAGKAAQAERGHRS
>NZ_CP027306.1|WP_114242706.1|641290_641605_-|hypothetical-protein
MNCTDAAGQSPDRSEEIGKLAGRVLVGVAKHLAVTSPAGVLASDVMRTCVAAEAYVVAGRSAGEANVIAEAALAAVPEAPDGVTRGKYAELLREAAESLGWGRS
>NZ_CP027306.1|WP_114242707.1|641842_642145_+|hypothetical-protein
MGDEEVQRVSDALEAVEQIADREERVRAKSRIMANQVQRNKVWSRERTELIRELWDNGNGLSYRQIADRLSIKLSTVQDAFRDYRGSGSHRPKATKPEET
>NZ_CP027306.1|WP_114242708.1|642397_642799_-|hypothetical-protein
MRRMRMSAAIVIAGVLMGCSGSSDLDPIVGRWTATGPQPTGYADFADGALISVDEDGTATLGSSPMSMCGDAAVEATEGSDGEGQRFRIAFPKKSSCVTVEVPSSLDVVVDGDSMTATPTGSPNAHFRFGRAG
>NZ_CP027306.1|WP_114242709.1|643011_643299_-|hypothetical-protein
MWPNAVVGALSRFEWAFKQPGRYLDASEAYSPGIEVEDARDDLEWAMLHLPPGAKRDLGRLITRIDEEFERRTLPEPNNIEWAMMGWWWTRMRER
>NZ_CP027306.1|WP_114242710.1|643547_645155_-|ISL3-family-transposase
MMVLFMQADTSFWDSLVFDGIDEVDVEAVTAAFDTVEVVARGRVAGAACPDCGRFSDRVHDRYQRRLKDLPLVDQGFVIRLTVRRFICGSADCRRRTFAEPFSRLAAPHARFTTRLNHALERVGLALAGRAGARLAAQLGFGAGRMTLLRRVMALPDPRFSMPRVLGVDDFAIRRGQTYATVLTSVEDHRVVDVLPTREAGPLAAWLIRHPGVEIICRDRAGAYAEGARRGAPDALQVADRFHLWQGLGRAVETCVAAHRDCLRNPSPSGMLPEATRLASSRPQDNLEPVGRRAERKKAAHALVHEMLAQGHSRRAIARHLGWGLNTVLRYAAAAHWQDTIRENRPRRSRLDPYKPYLERRFAEGCTSVTRLHSELVAEHAPVTYAMVRAHIATLRGAPPAAPPRPPTVRQVTGWLTRHPATLTDEDRAGLKEILARCPELDKAAVHVRDFGEILTDRLGSTLPTWIDAVDASQLPGLTGFALHLLRDLDAVTAGLTLNWSSGSIEGAVNRIKKIKRQLYGRAGFELLRKMILLQ
>NZ_CP027306.1|WP_114242711.1|644934_645630_-|hypothetical-protein
MNMLTVCLGNYCRSPFAALALARRGGEGIQVRSAGLIGKWQDQPANPSTIKAAGRLGYDLSTHRAQQITLEMLDWADTVLTMDAAVLETLRTICTEDNALKLGLYLGDRDVPDPMGQGDMPQQSAPLARVRRRTPCRLTARIDAPSGACRSMPWSAVDGDGAVHAGRYIVLGLAGVRRDRRGGCRGGHGRVRHGRGGGERPRGRGCMSGLRPIFGPSPRPLPAQAEGPSAR
>NZ_CP027306.1|WP_114242712.1|646763_647768_-|ATP-grasp-domain-containing-protein
MSTDQPFSRRILVTGVGANPGFGLTRSLQRLGHQVVATDANPLAPGLLLPDTLPRVTPRADDPDYPRAVAELCRELAVDAVVAGIENDILPLVAMLPDLDAIGVRVWLPDADSVRTCIDKAEFHDVLTAHGIATPRIYRPDEIDLIPEGTELVVKPRRGHGAQGVHFCDRREHARVLCELVPAAVVQERVHGSEFTADCLVDRAGRASAILRRRDLVKAGLAAVSTTFHDATVRDLVEKTLTVVRAAGLSCVQGFITDEGTVTITELNVRIAGGFPLTEAAGADLVGQMVNGLFGQPVDHDRLIYRPEMYLTNYVETLAVGNAATLATPKGELL
>NZ_CP027306.1|WP_114242713.1|647757_648786_-|dTDP-glucose-4,6-dehydratase
MDKVLVTGGAGFIGSHFVKRILQADDVAQVTVLDALTYAGHTENLGEAFLYPKLTFIHGNIVDADLVDQLVQQHTSVVHFAAESHVDRSFFTAGTFLTTNVLGTQTLADAAMRHGVQRFVHVSTDEVYGPLLEGAATEDDPLRPTVPYAASKAASDLVALSYHRTYDVPVCVTRSSNNYGPYQHPEKIIPLFVTRLLRGQPVTLHDRGQHVRNWLHVEDNCAAIELVLRGGVPGEVYNIGGGTDLTGRDLTGELLRICGADWDAVTYVPDRRCNDLRYAMEWTKIADELGYKPTHDLESGLVETADWYRRNPDRWAPLARSPHAPMPAVHVAALRPERGYVH

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Crispr_ID: NZ_CP027306_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_3

2688514-2688586

Orphan

Consensus_repeat	Method
GCTCTGGGTGCCGGACAGGTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_3

>merge|NZ_CP027306|3|2688514-2688586|CRISPRCasFinder
GCTCTGGGTGCCGGACAGGTCCTGGAGCGGTTCGCCCTGGAGCGCGGCCCGCTCTGGGTGCCGGGCAGGTCCT

>NZ_CP027306|3|3|2688514-2688586|CRISPRCasFinder
GCTCTGGGTGCCGGACAGGTCCT	GGAGCGGTTCGCCCTGGAGCGCGGCCC
GCTCTGGGTGCCGGGCAGGTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_114244186.1\|2682718_2683177_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP027306.1\|WP_114248951.1\|2688066_2688405_-\|isomerase	unknown	unknown	gnl\|CDD\|238324
NZ_CP027306.1\|WP_114244198.1\|2706167_2707142_+\|inositol-phosphorylceramide-synthase	unknown	unknown	gnl\|CDD\|379588
NZ_CP027306.1\|WP_114244194.1\|2701454_2702348_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP027306.1\|WP_114244185.1\|2680455_2681724_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP027306.1\|WP_114244191.1\|2696505_2698212_-\|glycosidase	unknown	unknown	gnl\|CDD\|200456
NZ_CP027306.1\|WP_114248950.1\|2687331_2688054_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP027306.1\|WP_114248949.1\|2683223_2685173_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114244184.1\|2677338_2677962_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|294013
NZ_CP027306.1\|WP_114244187.1\|2685248_2686154_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|378401
NZ_CP027306.1\|WP_114244188.1\|2686156_2687239_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|99782
NZ_CP027306.1\|WP_114244192.1\|2698624_2699692_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP027306.1\|WP_114244197.1\|2705012_2706080_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP027306.1\|WP_114244195.1\|2702344_2703361_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP027306.1\|WP_114244199.1\|2707542_2710533_-\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	unknown	unknown	gnl\|CDD\|237613
NZ_CP027306.1\|WP_114244196.1\|2703380_2704655_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270454
NZ_CP027306.1\|WP_114248948.1\|2678040_2680149_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP027306.1\|WP_114244193.1\|2699676_2701353_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471
NZ_CP027306.1\|WP_114244190.1\|2690808_2696121_-\|pullulanase-type-alpha-1,6-glucosidase	unknown	unknown	gnl\|CDD\|273974
NZ_CP027306.1\|WP_093897596.1\|2681708_2682356_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_114244186.1\|2682718_2683177_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	6.46271e-14
NZ_CP027306.1\|WP_114248951.1\|2688066_2688405_-\|isomerase	gnl\|CDD\|238324	cd00580, CHMI, 5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) is a trimeric enzyme catalyzing the isomerization of the unsaturated ketone 5-(carboxymethyl)-2-hydroxymuconate to 5-(carboxymethyl)-2-oxo-3-hexene-1,6-dionate. This is one step in the homoprotocatechuate pathway, one of the microbial meta-fission pathways that degrade aromatic carbon sources to citric acid cycle intermediates. Despite the structural similarity of CHMI with 4-oxalocrotonate tautomerase (4-OT) and macrophage migration inhibitory factor (MIF), there is no significant sequence similarity among these protein families, and therefore, they are not combined in one hierarchy.	2.83993e-23
NZ_CP027306.1\|WP_114244198.1\|2706167_2707142_+\|inositol-phosphorylceramide-synthase	gnl\|CDD\|379588	pfam14378, PAP2_3, PAP2 superfamily.	4.93871e-47
NZ_CP027306.1\|WP_114244194.1\|2701454_2702348_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.39917e-84
NZ_CP027306.1\|WP_114244185.1\|2680455_2681724_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.1996e-39
NZ_CP027306.1\|WP_114244191.1\|2696505_2698212_-\|glycosidase	gnl\|CDD\|200456	cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes AmyA proteins from bacteria, fungi, mammals, insects, mollusks, and nematodes. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	3.37107e-175
NZ_CP027306.1\|WP_114248950.1\|2687331_2688054_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.26664e-14
NZ_CP027306.1\|WP_114244187.1\|2685248_2686154_+\|metal-dependent-hydrolase	gnl\|CDD\|378401	pfam10118, Metal_hydrol, Predicted metal-dependent hydrolase. Members of this family of proteins comprise various bacterial transition metal-dependent hydrolases.	1.48913e-94
NZ_CP027306.1\|WP_114244184.1\|2677338_2677962_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	7.98071e-35
NZ_CP027306.1\|WP_114244188.1\|2686156_2687239_+\|oxidoreductase	gnl\|CDD\|99782	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster. PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur [2Fe-2S] cluster domain. Although structurally homologous to FNR, PDR binds FMN rather than FAD in it's FNR-like domain. Electron transfer between pyrimidines and iron-sulfur clusters (Rieske center [2Fe-2S]) or heme groups is mediated by flavins in respiration, photosynthesis, and oxygenase systems. Type I dioxygenase systems, including the hydroxylate phthalate system, have 2 components, a monomeric reductase consisting of a flavin and a 2Fe-2S center and a multimeric oxygenase. In contrast to other Rieske dioxygenases the ferredoxin like domain is C-, not N-terminal.	2.94894e-91
NZ_CP027306.1\|WP_114244192.1\|2698624_2699692_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	5.67197e-96
NZ_CP027306.1\|WP_114244197.1\|2705012_2706080_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.94128e-99
NZ_CP027306.1\|WP_114244195.1\|2702344_2703361_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.22851e-94
NZ_CP027306.1\|WP_114244199.1\|2707542_2710533_-\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	gnl\|CDD\|237613	PRK14109, PRK14109, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase.	0
NZ_CP027306.1\|WP_114244196.1\|2703380_2704655_-\|extracellular-solute-binding-protein	gnl\|CDD\|270454	cd14751, PBP2_GacH, The periplasmic-binding component of the putative oligosacchride ABC transporter GacHFG; possesses type 2 periplasmic binding fold. This group represents the periplasmic component GacH of an ABC import system. GacH is identified as a maltose/maltodextrin-binding protein with a low affinity for acarbose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.4677e-156
NZ_CP027306.1\|WP_114248948.1\|2678040_2680149_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	2.21896e-61
NZ_CP027306.1\|WP_114244193.1\|2699676_2701353_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP027306.1\|WP_114244190.1\|2690808_2696121_-\|pullulanase-type-alpha-1,6-glucosidase	gnl\|CDD\|273974	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP027306.1\|WP_093897596.1\|2681708_2682356_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.83012e-38

>NZ_CP027306.1|WP_114248951.1|2688066_2688405_-|isomerase
MTVDYSAELDDSFDRRGFALALHPLVAETVTTKIAGCKTRFRRIEEFVAGDAATGDAVLNISIALLPGRTEELKAQLTDSVLELLAAHLKPVDVTVHASAETRDLDPSYRKR
>NZ_CP027306.1|WP_114248950.1|2687331_2688054_+|TetR/AcrR-family-transcriptional-regulator
MTTGVRRRMGVEERRQQLIGVALELFSHRSPDEVSIDEIAAAAGISRPLVYHYFPGKQSLYEAALRRAADELAARFVEPREGPLGARLLRVMGRFFDFVEEHGPGFSALMRGGPAVGSSTANAMIDGVRQAAYEQILAHLGVEGPPARLESVVRSWVSLAESTALIWLDGRRIPREELEMQLVHDFAALAAVSAAYNTEMAGIVLRVFAQEPADGPFGELLNRLSALAPAVPAVPGQRLP
>NZ_CP027306.1|WP_114244188.1|2686156_2687239_+|oxidoreductase
MPLPLPRLRSVVLVAGAALLAKRAMRHRIENSPLWPLPALENPVSGHCDRGSTTTRRLLITERTAPADGVVQLRLEGPDLPAWQPGAHLDLLLPSGLVRQYSLCGNPADPDTYTIATRLVEEGRGGSREVHDRLHEGEEIEVRAPRNRFPLVEAPAYLFIAGGIGITPILPMLRSVAASGADWRLLYGGRSRATMPFLDGIEKLGSEGDRVTIVPGDEAGHPDTAAALADTAEGTAIYCCGPEPLMDAVTAALPPGRTLHLERFTAATTSSADSGPFEVELHRSGRTVQVAAGQSVLAAVREELSHVSYSCEQGFCGTCQQRVLEGEIDHRDELLTDSERDDSMLICVSRCRGERLVLDL
>NZ_CP027306.1|WP_114244187.1|2685248_2686154_+|metal-dependent-hydrolase
MSNTQPAPVASQRTQLKARKVSFAWEKTPLHWVPGDPFATHTINVLHLLLPAGERWFIHVYRQVLPYIHDEQLRQDVIGFIGQEAVHSQAHDDVLPRLKQLGLDPTPYTAQVDWLFEKLLGDRTLPPGRARKWWLMERVATIAAIEHYTAFLGDWVLNADELDRRGADPTMLDLLRWHGAEEVEHRSVAFDVFMHVDGGYRRRVRTWAAAFAALLFLWQRGTRFFMENDPSLLHGKASFKEFYISGRRGTLPATGDLLRSIPRYLSHAYHPSQEGSTDQAVDYLAHSPAATAAEARMTGTS
>NZ_CP027306.1|WP_114248949.1|2683223_2685173_+|hypothetical-protein
MRPLSEVPSAAAPADAKQAGAALVEHYPRLVRLGYLVLPPSLGCHRRVLTAHALAQRALLSGRSAGCVTEDRVPPPRRSAGAVVVDPSYAYVRGRVLHGALEAGRPLRRVRVTPLLPLVWGLRLFPHSGGSDELALEQALSTLSAPARAACVLRGLERLPDAEVRQVLAAAGVADPHAALAEAEDVSAPYALLDSPEFDPCSLQARPPDLLRRRQHTKAAVAAVAALLVCGALLGLPGNGWAGNDRGRGTGPGSPYTRNAAAEQALDPGALRRVSKTFWRRSPRTDFTAWPTRGDRAKDTRLLHRALTAWAHPDGAVRASATERTPVGPPMGAPQLLYAGEVDRATVVLFYDGLRIVRYAEPRDASPAGGVALDFARVDGADMASAGALIAGRTRDRVRYLTAPWVHAVSVRNLLAPGSAPRPLRRTPDGVTAALTSPATAGSCRAWDAIELRDDSATRLLTDLGELTPARLTSGPPSAAHDVSGRAERNSWARTACLLPSVRSHGVRSVNSWQYAEQLLPEDNGSAHWLCTRAETWRGTGSRVLAQFQAPSAPSAATGGPPGAVAARAEDTPACGMRDPRVLAGVLWKSHGGRWYVLAAGSEQFASLTTSGGVEGRSDSRLLAVPARAGDRARLNGTLTDGSRVGALR
>NZ_CP027306.1|WP_114244186.1|2682718_2683177_-|MarR-family-transcriptional-regulator
MCDAPGHEPGARTSAGGGAGFELPLLLFHGHPDVRPAYGFALQAVGRDGATASEIGRRLGVSKQAAGKTVEKLEGLGYVERVDDPRDGRRKLVRLTARGIDVLVRSAEGFDRLRAEWVRVLGADRVRAMEADLRAMAPASAFRLDAAGWFND
>NZ_CP027306.1|WP_093897596.1|2681708_2682356_+|response-regulator-transcription-factor
MRVVLAEDLFLLRDGLVRLLEAYDFEIAAAVETGPELTRALDELEPDVAVVDVRLPPSHTDEGLQCALAARQARPGLPVLVLSQHVEQLYARELLADGNGGIGYLLKDRVFDAEQFIDAVRRVAAGGTAMDPQVISQLLSRRSQDKPMGGLTPRELEVMELMAQGRSNAAIASQMVITERAVAKHTSNIFGKLGLPPSDDDNRRVLAVLAYLDRG
>NZ_CP027306.1|WP_114244185.1|2680455_2681724_+|sensor-histidine-kinase
MNAIRARVQAALLAAGRGVVLSIASLAGSVTLFVWTVLSIVFIPLGIGLVTTPYVLELVRKHANRRRLLAVTWSDIRIPVPYRPFPKDLRTGFTGQVERTTLILKDPATWRDIRWLLVDMTAGYVVSILAGALLLYPVEGFVLAAGLWRVFTDDRYWYAFVPVDSQATGLAAAALGVVLFATGVLVSERLLRLHFVIARSVLAPTHEQELARRIDRLTETRHEAVDTAASELRRIERDLHDGAQARLVAMGMNLGTVEALIEKDPAQAKKLLAMARESSAEALTELRDLVRGIHPPVLAERGLGDAVRALALRLPFASQVRVELSGRADAAIESAAYFAVSETLTNTAKHSGADRVWVDIHHADAMLRVSVTDNGRGGAAVGSGSGLSGIERRLGTFDGIMAVSSPAGGPTMVTMEIPCELS
>NZ_CP027306.1|WP_114248948.1|2678040_2680149_-|MMPL-family-transporter
MWSAHHRKTAILGWLLFVVLATGIGGASGLVEMTDSENAAGDSARAEQILDDAGLGQPAGELVMVSTAKAGDWQDVAREVSAAIGRTGEVANLAAPIPSEDGKDALITFDMKGDAATAPDRVQPVLDAVSAVRADHPDVTIHQFGEASAGKWLGDLLSEDFKKAEFTAVPLALGILLVAFGAVVAALLPVGLALTACMAAFGLLSLASHQLHLFQTTYSVMFLMGFAVGVDYCLFYLRRERDERAAGRDAETALRIAAATSGRAVLVSGLTVMVAMAGMFLSGLMLFKGFALATIIVVFIAMLGSVTVLPALLSWLGDRIDAGRVPFLNRRSSRRGNRRARASGGFAGTVLKPVLARPKIFAAASVVVLLALAAPALGMKTEQLGLEKQFGSDSPLSVSYRQINESFPGGPAPARVVVKADNIDTPALRKAFDGFDNVTVHKARNVAEIEVPLPDGKAELAELRKERLPAAFDGTGAQAYVTGEIAGSVDFNDQLKRGIVPVFAFITAVTFLLMLFCFRSYVIAVTSILLNLLSVAAAYGVMVAVFQHGWGASLIGSEGVGAIEAWIPLFVLVVLFGLSMDYHVFVVSRIREARDRGLHTRAAIDEGIRRTAGAVTGAAVIMVAVFAVFGTLSMQDMQQMGVGLAVAVLLDATIVRMILLPSVMALLGERNWRTPRALTRLPVLEHGEPETGEVPVGSGARG
>NZ_CP027306.1|WP_114244184.1|2677338_2677962_+|winged-helix-turn-helix-transcriptional-regulator
MANTRTFSAAAAATAAPSATAAATTSARSLSPNRHRLRAVDPEEVVQSADVAEFLPPGATWLPAPQHTVPALPGRPPMIGYLVLVPADQQPAVTAAAAAAAQYVVQAPVEDPATTGPVRIDPVQRTAAVDGKTLDLTFLEFELLAHLVAHPHRVHTRDQLVTTVWGYGHVGDGRTVDVHVARLRRKLGTEHRRSIQTVRRVGYKYAP
>NZ_CP027306.1|WP_114244190.1|2690808_2696121_-|pullulanase-type-alpha-1,6-glucosidase
MSRTSLRRGVVAALCAALIPVVPAAATSAAPRPPGPPSDAALAAEPARHDLTREQFYFVMPDRFADGDTSNDRGGLTGSRLETGYDPTDKGFYQGGDLKGLTGRLDYIKGLGTTAIWLAPIFKNRPVQGTGKDASAGYHGYWITDFTQVDPHFGTNADLSKLIDKAHGKGMKVFFDVITNHTADTVDYAEKTYGYRPKGAYPYLDKDGRPFDDGKGLAKVDADSFPYTPKNTGNKVPAWLNDPTMYHNRGDSTYAGESTTYGDFSGLDDLWTERPEVVSGMEKIYEKWVRDFDIDGFRIDTVKHVDLDFWTQWATALDAYAAKHGRKDFFMFGEVYSADTAITSPYVTRGRLDATLDFPFQEAARQYASQGAPASKIAAVFGDDYRYTTDKANAYEQVTFLGNHDMGRIGSFLKQDNPKADDAELVKHAQLANELMFLSRGNPVVYYGDEQGFTGAGGDKDARQTMFASKTADYLDDDELGTDRTHAFDAYDTKHPLYRNIAALSELTRKNPALRNGVQTERHAEGPVYAFSRTEPEQGHEYVVATNNGSEARTVELPTASAGMNFRTIYGGSDLTRSGTDKKLTVTVPALSSVVLRAEKPLGTPAAKPSITLTAPAAGATGTVEISADVDGGSLNRVVFAAQTGNGKWVTLGSADHAPYKVTQTVGDSVPAGTPLRYKAVVVDRAGRTASAQASSTAGQAPAAEKPVAVERDYAVVHYKRADGDYDGHQVKSGDTTADFIGRDAYGAFAWIKLDEGTTSVPYTVEKSGTPDGPRRSIDLAKTGQVWIEQGKDGQADEAPDGAYPPQDTTKAVLHYYRADGDYDGWGLHTWTGAKDPTDWAKPLQPVKKDASGVTFEVPLTDGATSLSYILHKGDEKDLPSDQSLDIATYGHEVWMLGSTPGYLLPQTGGVPTPDLTRAEAQWIDSDTVVWKVKATEATSQQLVHASGGGISVVDGALSDEGQWLRLAPSALTDAQKAKYPHLKDYPAFTVDVRDRDRVREALRGQLIATQRAANGALLAATGVQSAGVLDDLYGKKAATASLGPVFDHGRPTLSVWAPTAQTVALELDGKSVPMRRDDRTGVWSVTGTAKWTGKPYRFVVKVWAPTVQKIVTNKVTDPYSTALTTDSARSLVVDLDDPGLAPKGWSGLEKPAAVPLRDAQIQELHIRDFSIADRTSKHPGEYLAFTDTRSDGMKHLEELADSGTSYVHLLPAFDIGTIPEKKSAQQKPACDLSVYAPDSEEQQACVAKAAAQDGFNWGYDPLHYTVPEGSYASDPNGTRRTVEFRQMVQGLNGAGLRTVMDVVYNHTVASGQDGKSVLDRIVPGYYQRLLEDGAVATSTCCANTAPENTMMGKLVVDSVVTWAKEYKVDGFRFDLMGHHPKANILAVRKALDALTVAKDGVDGKKIILYGEGWNFGEIADDARFVQATQKNMAGTGIATFSDRSRDAVRGGSPFDEDPGVQGFATGLYTDPNTSAANGTKADQKARLLHYQDLIKVGLTGNLAGYTFTDSSGNTVKGSGVDYNGAPAGYAAAPGDALAYADAHDNESLYDALAFKLPAGTSAADRARMQVLAMATATLSQGPSLSQAGSDLLRSKSLDRNSYDSGDWFNALHWDCRDGNGFGRGLPPAADNESKWSYARPLLSATALSPGCAQINGASAAYQDLLTIRSTEKDFDLSTTEQVQSALSFPLSGKDETPGVITMRLGKLVVVLNATPGTETQKIAGLAGQQYALHPIQAAGADSTVKESTYERSSGSFTVPGRTVAVFSLS
>NZ_CP027306.1|WP_114244191.1|2696505_2698212_-|glycosidase
MARRPLSAALALIAGAAALVAPTTTAQASTPGDKDVTAVLFEWKFDSVAKACTDSLGPAGYGYVQVSPPQEHIQGGQWWTSYQPVSYRIAGRLGDRTSFADMVSTCHSAGVKVVADSVINHMSAGSGTGTGGSSYTKYNYPGVYSAADLDDCTAQISNYQDRANVQNCELVGLADLDTGEDYVRGRIAGYLNDLLSLGVDGFRIDAAKHMPAADLANIKSRLNNPGVYWKQEAIHGAGEAVSPDEYAGTGDVQEFRYARSLKQVFNNENLAHLKNFGEGWGFMPSSKAAVFVDNHDTERGGDTLNYKDGASYTLASVFMLAWPYGSPDVHSGYEWTDKDAGPPSGGTVNACYSDGWKCQHAWREISSMVGFRNTARGEAVTNWWDNGGDRIAFGRGSKAYVAINHEGSSLTRTFQTSLPAGDYCDIQSGNGVTVNGSGRFTATLGANTALALQVNARTCAGGGSTDPGTSTSGASFGVDATTQLGQNIYVTGNQAALGNWNTGSALKLDPATYPVWKLDVNMPAGTSFEYKYLRKDASGNVTWESGANRTATVPSFGKATLTSDVWRS
>NZ_CP027306.1|WP_114244192.1|2698624_2699692_-|LacI-family-transcriptional-regulator
MVDGVTVPLPRSPGTGGAPRLSDIAGQAAVSEATVSRVLNGKPGVADTTRQRVLAALDILGYERPVRLRRRSAGLIGLVTPELINPIFPAFAQSVEQVLAGHGYTPVLCTQLPGGATEDELVEQLVERGVGGIVFLSGLHADMSADPARYAALTDRGVPFVLINGYNERISAPFVSPDDSAAVRMAVGHLADLGHRRVGLAIGPQRYVPSRRKREGFVEAAVNLLGLGRAEAELLVCSTLFSVEGGQVAAGALLEQGCTGIVCGSDLMALGVVRAARERGLDVPRDVSVVGFDDSQLIAFTDPPLTTVRQPVQAMAAAAVSALLEEIGGSPVQRTEYVFQPELVVRGSTAAVRGA
>NZ_CP027306.1|WP_114244193.1|2699676_2701353_-|glycoside-hydrolase-family-13-protein
MTQHLAAPSTGTSDDAPGHRTGWWQDAVIYQVYPRSFADGNGDGMGDLAGVRDRLPYLKDLGVDAVWLSPFYASPQADAGYDVADYRAIDPMFGTLLDADALIRDAHDLGLRIIVDLVPNHSSDQHEWFRRALAEGPGSALRERYHFRPGKGADGELPPNDWESIFGGPAWTRTADPDGTPGDWYLHLFAPEQPDFNWEHPAVADEFRSILRFWLDMGVDGFRVDVAHGLVKAEGLPDLGTHDQLKLLGNDVMPFFDQDGVHEIYRSWRTILDEYPGERIAVAEAWTPTVERTANYVRPDEMHQAFNFQYLSTAWDAAELRKVIDTSLDAMRPVGAPTTWVLSNHDVTRHATRFANPPGLGTQIRDAGDRELGLRRARAATLLMLALPGSAYVYQGEELGLPDVTDLPDEVRQDPSFFRAEGQDGFRDGCRVPIPWTRDGSSYGFGTGGSWLPQPDSWGGLSVEAQTGDAGSTLELYRAAIAARRVHPGLGAGTVVEWLQAPEGLLIFARPGFVCTVNTTGRPVRIPVRGTVLLSSTPVAADGAEIELPADTTVWWTV
>NZ_CP027306.1|WP_114244194.1|2701454_2702348_-|carbohydrate-ABC-transporter-permease
MTTAPATTVPATSARHSARKVRLRGERSPIASVGLHLTLIVASVIAVFPVLWVLLTSLKPVAYATTTDFFKETTFENYTNLIQNTKFLTWFGNSLLIAGLTTLLGVIISASTGYAVSRFRFPGKRGLMWTLLITQMFPVAVLIVPIYNIMAGMGLLNQPAGLVITYLTISVPFCAWMMKGFFDTIPREIDESGQVDGLTPFGTFWRLILPLAKPGLAVTAFYSFITAWGEVAYASAFMVGEDNLTLAGGLQLFVNQYGAQWGPMTAASVLIAIPAALVFLFAQRHLVTGMSAGAVKG
>NZ_CP027306.1|WP_114244195.1|2702344_2703361_-|sugar-ABC-transporter-permease
MAVHTSQSVAKAAGDDVARGRSRGTGNPPPPSRLRRALSTHWYAWTMVAPVVVVIGVIIGYPLVRGIYLSMTDANERNVERSIGVNHSPATYKFVGLDNYTEALTGNQFLGTLGWTLVWTVSCVAITFSLGMALANILNRRIAGRSAYRMALILPWAIPGFVSVFAWRFLYNEDRGLLNKILSGGGIDGIPWLNDPTWAKLSVIAVNVWLGVPFMMVALLGGLQSIPSEQYEAAEMDGATAWQRFRHITLPGLRPVSTTVILLSTIWTFNMFPVIYLLTRGGPGEATQILVTQAYKFSFEISPRDFAQSSTWGVLILVLLMIFAAVYRRVLRTQGDDW
>NZ_CP027306.1|WP_114244196.1|2703380_2704655_-|extracellular-solute-binding-protein
MRRGITATALVAALALAATACGSDSESDGTSKGSGELSGTVTWWDTSTVGSEDKVFKKIAEDFTKQHPKVHIKYVNVPFGDAQNKFKNAAQSGSDAPDVIRSEVAWTPEFADLDYLAPLDGTAALQRPDDFLKQAAASTKYNGKTYAVPQVIDSMGIFYNKKIFKEAGVEVPQTIDELKTVSKKIKDKTGKTGMYLRGDDAYWFLSFLYGEGGDMVDASTKSVTIDNPEGVKAMKVVKDLVDSGAAKTDATDGWENMQSSFKDGKVAMMINGPWAVADTYAGKEFKDKANLGIAPVPAGSAAQGAPQGGHNLAVYAGSKNLDASYAFVDYMTSADTQAKVTKELSLLPTRTSAYAKQDVVDNEIVGFFKPVVETAVERPWIPETGSLFAPLVTEYTKVLTGQTAPEKAVKTTGDSYRKLLKGWK
>NZ_CP027306.1|WP_114244197.1|2705012_2706080_+|LacI-family-transcriptional-regulator
MTARLADIATQAGVSEATVSRVLNGKPGVAAATRESVLAALDVLGYERPVRLRRRSAGLVGLITPELENPIFPALAQVIGQALTRQGYTPVLATQTPGGSTEDELTEMLVDRGVSGIIFVSGLHADTSADMQRYEQLRAQGVPFVLVNGFSPKVQAPFISPDDRAAMRLAVTHLVSLGHQRIGLAVGPKRFVPVLRKIEGFHSTVQEQLGLAPAEVEELIQHSLFTLEGGQAAASALMERGCTAVVCASDMMALGAIRAARRLSLEVPRDLSVVGYDDSPLIAFTDPPLTTIRQPVTAMGQAAVRTLLEEIGGTPAPHSEFVFMPELVVRGSTAAGPGPAPASTAGAFPGSHARS
>NZ_CP027306.1|WP_114244198.1|2706167_2707142_+|inositol-phosphorylceramide-synthase
MGELSVTSQEGRPEATASPIVDEAAPTANARQNAGWQRGGPARLRSLRSPRRPRIWFEILLIAASYWVYSLVRNAVPEQKAEALHNADWIWSVETHLGIAVEQTVNHAVNSVTWLIVLMNYYYATLHFIVTVCVLVWLFHRHPGRYAAARLALFATTAVALLGYYLYPLAPPRLMNGGHFIDTVLVHQTWGSMASGNFKNMSNQYAAMPSMHIGWSLWCGLTIFALASAPWARILGLLYPALTLLVIVSTANHFWLDALGGMTCLAFGYAISYAWYGSLPHHLPKRVPLPRERSRPAGLSAGTPIRTQRPAKDAAARNSSPSGV
>NZ_CP027306.1|WP_114244199.1|2707542_2710533_-|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase
MTTVPGRRSSTFTRLLRHGFTDPSAAERLLDLPELSSVRSDPVLLDALGATADPDLALRGVVRLVEAEEPDERQVLLDTLVTAKPLRDRLLGVLGASEALGDHLARHPRDWHALVTYEATDLHPGVAEFEQGLAGADDPDSLRVAYRRCLLAIAARDVCGTTDVAEAAAELADLATATLRAALAIARTAVPSDAAQCRLAVIAMGKCGGHELNYVSDVDVIFVAEPVDGCEESAAVQAATRLAAHMMRICSDTTVEGTIWPVDANLRPEGRNGPLVRTLSSHLAYYQRWAKTWEFQALLKARPVAGDPELGAEYVEAVSPLVWQAADRENFVADVQKMRRRVVDNIPADRVEREIKLGPGGLRDVEFAVQLLQLVHGRSDATLHSGTTLEALRALAAGGYVGRVDAAQLDDAYRFLRAMEHRIQLYRLRRTHLVPEAESDLRRLGRSLGMRTDPITELGQAWKRHASVVRRLHEKLFYRPLLDAVAQLAPGESRLSAKAAVHRLEALGYADPAAALRHLEALSSGVSRKAAIQRTLLPVLLGWFADSADPDAGLLGFRKVSDALGKTPWYLRLLRDEGAAAENLARVLSAGRLAPDLLLRAPEAVAILGDPQGLKPRSREHLEQEVLAAVGRAEGAESAVAVVRGVRRRELFRTTAADLIGSYGTEERPAEEDPGALVDRVGNAVTDLNAVTIAGALRAAVREQWGDTLPTRFAVIGMGRFGGHELGYGSDADVLFVHSPREGVDEQEAGRAANQVVSEMRRLLQLPTADPPLIIDADLRPEGKSGPLVRTLRSYEAYYRRWSLVWESQALLRAEPMAGDEELGRDFIELIDPLRYPMEGLGEDAVREIRRLKARMESERLPRGADPTLHTKLGRGGLSDVEWTVQLMQMQHGWVEPGLRTTRTREALAAACAAELISGEDAQTLDEAWVLATRVRNAVMLVRGRPGDTFPSGPRELTAVGRYLGYEPGHVGDMLDDYRRITRRARAVVEERFYGA

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Crispr_ID: NZ_CP027306_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_4

2966365-2966469

Orphan

Consensus_repeat	Method
TGCTCTGCCAATTGAGCTACAGGGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_4

>merge|NZ_CP027306|4|2966365-2966469|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGATCGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGCTGCTCTGCCAATTGAGCTACAGGGGAT

>NZ_CP027306|4|4|2966365-2966469|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGAT	CGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGC
TGCTCTGCCAATTGAGCTACAGGGGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_114244395.1\|2977316_2978639_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|235098
NZ_CP027306.1\|WP_114244392.1\|2972452_2973547_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|235640
NZ_CP027306.1\|WP_114244393.1\|2973821_2975729_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP027306.1\|WP_114244383.1\|2954438_2955476_+\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|336482
NZ_CP027306.1\|WP_114244384.1\|2955497_2957123_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225113
NZ_CP027306.1\|WP_114244381.1\|2952892_2953645_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371045
NZ_CP027306.1\|WP_114244387.1\|2961909_2963175_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP027306.1\|WP_114244386.1\|2960543_2961905_+\|acetyl-CoA-carboxylase	unknown	unknown	gnl\|CDD\|223895
NZ_CP027306.1\|WP_114244394.1\|2975874_2977134_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
NZ_CP027306.1\|WP_157987094.1\|2980197_2980509_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114244382.1\|2953723_2954290_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114248982.1\|2959165_2960551_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|236096
NZ_CP027306.1\|WP_114244389.1\|2967019_2968465_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|198375
NZ_CP027306.1\|WP_114248983.1\|2963301_2965086_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP027306.1\|WP_093897145.1\|2957100_2957532_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP027306.1\|WP_114244388.1\|2966649_2966949_+\|YtxH-domain-containing-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114248984.1\|2979319_2980117_-\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|319818
NZ_CP027306.1\|WP_114244385.1\|2957669_2958878_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_CP027306.1\|WP_114244391.1\|2970367_2972299_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP027306.1\|WP_114244390.1\|2968634_2970368_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_114244395.1\|2977316_2978639_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP027306.1\|WP_114244392.1\|2972452_2973547_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	3.40437e-162
NZ_CP027306.1\|WP_114244393.1\|2973821_2975729_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP027306.1\|WP_114244383.1\|2954438_2955476_+\|rod-shape-determining-protein	gnl\|CDD\|336482	pfam06723, MreB_Mbl, MreB/Mbl protein. This family consists of bacterial MreB and Mbl proteins as well as two related archaeal sequences. MreB is known to be a rod shape-determining protein in bacteria and goes to make up the bacterial cytoskeleton. Genes coding for MreB/Mbl are only found in elongated bacteria, not in coccoid forms. It has been speculated that constituents of the eukaryotic cytoskeleton (tubulin, actin) may have evolved from prokaryotic precursor proteins closely related to today's bacterial proteins FtsZ and MreB/Mbl.	6.84623e-131
NZ_CP027306.1\|WP_114244384.1\|2955497_2957123_+\|GAF-domain-containing-protein	gnl\|CDD\|225113	COG2203, FhlA, FOG: GAF domain [Signal transduction mechanisms].	1.98995e-16
NZ_CP027306.1\|WP_114244381.1\|2952892_2953645_-\|hypothetical-protein	gnl\|CDD\|371045	pfam10428, SOG2, RAM signalling pathway protein. SOG2 proteins in Saccharomyces cerevisiae are involved in cell separation and cytokinesis.	8.15486e-05
NZ_CP027306.1\|WP_114244387.1\|2961909_2963175_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.53415e-70
NZ_CP027306.1\|WP_114244386.1\|2960543_2961905_+\|acetyl-CoA-carboxylase	gnl\|CDD\|223895	COG0825, AccA, Acetyl-CoA carboxylase alpha subunit [Lipid metabolism].	6.86216e-52
NZ_CP027306.1\|WP_114244394.1\|2975874_2977134_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	6.4318e-73
NZ_CP027306.1\|WP_114248982.1\|2959165_2960551_+\|acyl-CoA-synthetase	gnl\|CDD\|236096	PRK07787, PRK07787, acyl-CoA synthetase; Validated.	0
NZ_CP027306.1\|WP_114244389.1\|2967019_2968465_+\|sugar-kinase	gnl\|CDD\|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	4.2859e-118
NZ_CP027306.1\|WP_114248983.1\|2963301_2965086_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.43881e-154
NZ_CP027306.1\|WP_093897145.1\|2957100_2957532_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	3.578e-31
NZ_CP027306.1\|WP_114248984.1\|2979319_2980117_-\|HAD-family-phosphatase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.77551e-61
NZ_CP027306.1\|WP_114244385.1\|2957669_2958878_+\|MFS-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	2.63533e-78
NZ_CP027306.1\|WP_114244391.1\|2970367_2972299_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP027306.1\|WP_114244390.1\|2968634_2970368_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.06942e-164

>NZ_CP027306.1|WP_114248983.1|2963301_2965086_-|ABC-transporter-ATP-binding-protein
MAFRRFWPLTKGDRRWLILIFLCAVLAAIAETITVLLFAKLTDTALQTGSVSAFWKPAGQWVVVAVIGAVVGYLGNSLAAWVAERFVMRLRARVFSHLQTLPPHFYQRNRRGDLVERLTGDVEAIEALVVSGIVGAASALFGTLFYAAAALWLRWDLALATFVMVPLFWFTTTRFAGPLRAVSRRGRAADGAITAVVEETLVNVVMTQAYNRQQEEETRLLDKARIRLRTAVKAVRLTEFYEQLVEVLETLCVLAIIGLGAWEISAGRMTLGQLLAFAAFIGYLYPPIRSLGQLGLTATAATAGAERLLEILDAEPAVTDPAASVPAPPRNRALGEVEACQVTFHYPGSSEPVLRDLSFTASPGELLVITGPSGAGKSTLAALLLRFYDPDAGSVRLDGVSVDRLPLTYLRRNITLLPQDTLVLHDTIEENIGCGRTDVSHRDVVEAAKAADAHGFIGTLPEGYATVISSGTSRLSGGQLQRIAIARAMLRDAPVLLLDEPTTGLDRMAAQRILAPLRRLAEGRTTIVITHDLALAASADRILVLDEGRLVESGTHTQLLGRRGLYATLFERRAQQPHNGTVYSPARPSGIHWR
>NZ_CP027306.1|WP_114244387.1|2961909_2963175_-|MFS-transporter
MTGTAEEPAHRTRILADLTPLRTSPDYRRLWFGNMVSWIGQGMTALAVSLQVYDITGSAFSVGLIGFCSFLPLVVFGLYGGAVADTIDRRKLGLAGSAGSFVLSVGLVAATVAGVEQVGLLYAIVALQAACFAVNSPARSSMIARLLPAEQLPAANALNSMTGTTGTLVGPMLGGIVVGWWGYRAAYTVDVITFTASLYAMWRLPSMLPEREEGAGGKRASVADGLRFLGTRPNLRMTFFTDLCAMVLAHPRALFPVVAVLWYGGDAKTTGLLVAAPALGALLGGVFSGWLGRIRRHGLAVLLAVASWGTAIAIFGLTRQLWLGLIFLALAGCADTTSMVFRNTMLQAAVPDEMRGRLQGVFIVVVAGGPRLGDFLAGSVADLASPGLAVTGGGIACVVAVSLLGLRWRGFARYDAKDPQP
>NZ_CP027306.1|WP_114244386.1|2960543_2961905_+|acetyl-CoA-carboxylase
MRDRLTARAAIAALTTEFEELVESGVADHDTDGDGPLSWAGYADSRARAAARTGEEESVVHGLASVGGRSCVLVSFEFGFLGGSLGRRTGDLLEAAYEAARTRGLPLVSLIATGGSRMQEGMVALTQLQRVARASARLRAAGPAQLAVLRDPTTGGGWATLGAGADVILALPGAQVGFAGSRVRPADADPHAYTAEGQLAAGQIDAVVPPDELPETVARWLQALHTPGSPALGPAPVPDALSATGLPVTGWDAVRQARSPSRPRAEAYLDAYFDHRLPLGGDRCGGTDPGLRCGFGRRDGRTIAYVAQCGTATRPAGYRTAARVIRLADRLGVPVLTLIDTPGAANDAEAERAGAGAAIAGTFAAIAEARVPVTTLVIGEGGSGGALALAAPGNTYVTQDSYFSVIAPESAAAILKRTPDEVRATADQLRLRPQDLVELGIARAVVRPDPSED
>NZ_CP027306.1|WP_114248982.1|2959165_2960551_+|acyl-CoA-synthetase
MTYDRLAAASTALAARLSGAGRVAVWATPTPETVVAVVAALRAGVPAVPLNPKTGTRELAHIVADSEPTVVLAGAGDVLPPVLDTLDRIDVDTTPDREGGGAALPEPSPESPALIVYTSGTTGPPKGAILPRRAIAASLDALEDAWQWTGDDVLVHALPLFHVHGLILGVLGPLRRGGSVRHLGRFSTGGVARELSSGGTMLFGVPTMYHRLAEALDGSAPGAAELAKALAGARLLVSGSAALPVHDHERIAAATGRRVIERYGMTETLMNTGVRADGEPRPGTVGAPLRGVELRLVEEDGTVLTDPDAIGEIQVRGTNLFTGYLNRPDATAAALTEDGWFRTGDMATRDTDGYVRIVGRKATDLIKSGGYKIGAGEIENALLDHPGVHEAAVTGEPDPDLGERIVAWVVPADPASPPTKDELADHVAAQLSPHKRPRTVRYLDALPRNDLGKIMKRSLHA
>NZ_CP027306.1|WP_114244385.1|2957669_2958878_+|MFS-transporter
MDTAVKQPPVPVGAPSAAARRNLVMATIGFGLTFWAWNLIAPMAGGYKERLGLNSFEQSLLVAVPVLVGSLGRIPVGALTDKHGARLMFPLISALTVVPVLLLIPAKNSYGAMLAVGFLLGLGGTTFAIGIPLVNSWFPPAGRGLALGVFGMGMGGVALSGYFTPRIAEHGDNLPFLVVAAALVAYAALAAVLVSDRPDRPVPTDSLAHRLGDAGRLRVTWELSALYAIGFGGIVAFGVYLPTYLKTWYDLSPTDAGTKAAGFALVTVVFRPIGGWLSDRIHPALVTAAALGLAALMAIVQAFDPELAPGGTIALLCMAAGLGTASGSVFALVSQVTPQAKVGSVTGIVGAMGGLGGFVPPLVMGAIYSAKGSYSIGFMLLSDLALAGCVYAYGRMRGLQRQ
>NZ_CP027306.1|WP_093897145.1|2957100_2957532_-|Lrp/AsnC-family-transcriptional-regulator
MDRLDREILGILQEDARISYRDLGVRVGLSANAAADRVRRLRRDGVIRGFTVIIDPAADTRTGLVVFIDVSLRMDTTNEVFERAVLALPGITEVVHVTGGHDYLVRAAVADTAALDGLLRRLKREAGVAHSNTRVALRAAPAR
>NZ_CP027306.1|WP_114244384.1|2955497_2957123_+|GAF-domain-containing-protein
MTEDTANTSAANTAAGPPDEETAAASGTPQAPRLPMLLEAVLSVGTDLELRATLQQIVDTAAALTEARYGALGVLDTERGTISELFTSGLDDTERQRIGHLPDGHSGMLGVLIDEPEPLRSDDLTTDPRSCGIPPGHPPMHSFLGSPIRVQKQVFGNLYLTEKRTGHFTDADMALMRVLASQAGIAIGNARLYEAARQRERWIEGAAAVTTTLLTGENAVDALMTVAEGARVLADACAGVILQPNKEGGMEIVTASTLDDPAGIVGTTIEPGSALLVQLLGGEPVFIEDSATDPRMTTHVRTRFGPSMMLPLQSGGRLIGTLALPRRRGDRPYTAADRQLASQFASQAALALVLADAQHDREQLAVYEDRDRIAHDLHDLVVQRLFATEMMLESTRRRAAAPESDELLGKAVDELDSTIQEVRTAIFTLQQPPAEVPTTFRGRVLRETRGAAAVLGFQPSVHFDGAVDTLVRDPVDRRLLAALRSALATAHRRAGVSAIEVEVDATAVLPDGRAAVRLAVADDGRDEDGSRSPTFTWQAPL
>NZ_CP027306.1|WP_114244383.1|2954438_2955476_+|rod-shape-determining-protein
MTVSLEQLRRCHVAVDLGAARTRVYVKGLGLVVDEPSAAAMNTRTGSLIAVGALAEQMTGRTPDYIKVVHPVTGGTVIDIEMAQRMLRQLLGDKLRRQLRRKPRLRAAACTPHDSDPLAQRATVETLVGLGARRVELVDTLIAAAVGCGLPVEQPTASMIMVCGAATTQIAVLSLGSIVTAARIPVGGDAIDHAVIQHLRQHHELMLPSQSVRPLQVALSGSGLSAHGPAMTEIHGRDVATGLARSVQVDTAAMRQAIHAPLTAVLDGLGKILRDCPPDLVADVADCGIVMVGGSAQLPGLEQLLRNATGVPVHIAERPDVCSVLGLGAMLDGKIEPLVLDPLAC
>NZ_CP027306.1|WP_114244382.1|2953723_2954290_+|hypothetical-protein
MTSPAHFGPREFQLVLLRRMADHQPALVDDARQELSASLAEMREANRRWQAMVRAPRGRGALRRYRSVLGEPESSVHRTIGDLECDALLWPVPLWPDLRFEVMVAPGGAVWNEWLVRAPGAPGPELRTVEDLRPWSGTVDEVARAFAPARPMEGSAPTRWALAITAPGTGEPYVAEFTWGLFQRLLPG
>NZ_CP027306.1|WP_114244381.1|2952892_2953645_-|hypothetical-protein
MDYCHPCQRHLNGALACAGCGTPAEALSHYATPAFSGHEPDAERETPAPSQPGGRSRRGHGAAQPARGTHGSHRPDRRAGAQGRGRRTHRRRGRTALLVVLGVVLAAGALSLAELAIEPKGDDGASDYVRESTSVTTEPAPDPSASDAVEPPGPVGGPSVLPATDSHPAADGRQSSAGTSHSRPAASASTASSAPAEPSSGPTAGGMPRDPSGSARSSGEPTKSTPPASPAPTPTPTESESCWWIPWFCQ
>NZ_CP027306.1|WP_114244388.1|2966649_2966949_+|YtxH-domain-containing-protein
MRYRLTFIAGLALGYVIGARAGRERYEQLKKSARQFAQNPAVRNTAESAAQSGRDLAGKAYHAVSDKVGEKVPASVADRMRSLRDRGQNNEDDWGTTNT
>NZ_CP027306.1|WP_114244389.1|2967019_2968465_+|sugar-kinase
MGIVAGLDSSSAFTHIVVCDTDTGAVLRRGYAAHPVDAKATEVDPQAWLLSLGEAATGGLLEGVQAIGVAAQQHGLVPLDHQGNLVRPALLGNDRRAQVAAADLIDGLGGRQAWAEAVGSVPQAAQPVSKLRWLARTEPEAAQRVASVLQPHDWLVWQLLGRPARRTTDRGAASGTGYWSAGSGAYRPDLVELALGHQAALPEVLGPSDAAGTTPEGLLISAGTGETMAAAFGLGVGAGDAVVSLGASGSVMAVHHEALSDPSGMITSFADATGMHLPVVYTSNAVRALRGTVEMLGVEGLEELSALALKSTPGASGLVLLPYLEGERTPHLPHTAGTLCGLRRESMKPEHLARAAFEGMLCSLADALDVLRGRGVEVRRVFLLGAAAELPAVQGLAPALFGTQVVVPQPAEYAALGAARQAAWALGVSRGTADPLTPPAWQGAAAQVLEPGEELAAGRAVRQQYVATRDQIHPGAFDSAS
>NZ_CP027306.1|WP_114244390.1|2968634_2970368_+|ABC-transporter-ATP-binding-protein
MLIKLLRACLGPYKKPILLLVLLQLLQTCASLYLPTLNADIIDNGVVKGDTGYILEFGGIMIAVSIAQVVCNMGAVYYGARTASALGRDVRASIFDRVQSFSAREVGRFGAPSLITRTTNDVQQVQMLVLMTFTLMVSAPIMCVGGIIMALGQDVPLSAVLLAVVPVLGIAVSLIVKRMRPLFRTMQERVDTVNRVLREQITGNRVIRAFVRDRYEEERFRGANNELTDVALSTGRLMALMFPTVMTVVNVSSIAVVWFGAHRIDSGGMEIGALTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLETESSVVPPVEPVSELRAHGHLEVRGADFRYPGAEEPVLRSVDLVARPGETTAIIGSTGSGKSTLLGLVPRLFDVTDGQVLVDGTDVRTLEPALLAKTVGLVPQKPYLFSGTVATNLRYGNPDASDEELWHALEVAQAKEFVEALEHGLHAPIAQGGTNVSGGQRQRLAIARTLVQRPEIYLFDDSFSALDYATDAALRGALSQETAEATVVIVAQRVSTIRDADRILVLDEGRVVGSGTHHELMDGNDTYREIVLSQLTEAEAA
>NZ_CP027306.1|WP_114244391.1|2970367_2972299_+|ABC-transporter-ATP-binding-protein
MAGPGGRMMAGGAPTDRSMDFKGSSKRLLKRFAAEKTPLYVMLAASVLSVGLSVVGPKILGRATDLVFAGVVGRSMPEGTTKEQAVEGLRRTNSGLADMLSGVDFTPGHGIDFGAVGDVLLAALAVYVGAGLLMLVATRLSIRIINQIVFQLREDIQTKLSRLPLSYFDRAKRGEVLSRATNDIDNISQTMQQTMGQLINSLLTIVGVLIMMFWVSPLLALVALVTVPLSVVVASKVGKRSQPQFVQQWKVTGKLNAHIEEMYTGHTLVKVFGRQEESAKGFAEQNEALYEAGFKAQFNSGIMQPLMMFVSNLNYVLIAVVGGLRVASGSLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGIASAERIFELLDAEEQGADPAPGTGEHPEELRGSVSLEKVSFRYDPEKPLIEDLSLNVEPGHTVAIVGPTGAGKTTLVNLLMRFYDVTGGRITLDGVNVANMSRDDLRSGIGMVLQDTWLFGGSIAENIAYGASREVTREEIEEAAKAAHADRFIRTLPDGYDTVIDDEGSGVSAGEKQLITIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMARLAHGRTSFVIAHRLSTIRDADVILVMENGSIVEQGTHDELLDAEGAYARLYSAQFAQAVAEVD
>NZ_CP027306.1|WP_114244392.1|2972452_2973547_-|RNA-polymerase-sigma-factor
MQTRTLTETEHVSAIPAQNRAVRHPEAAVEPQTPPDPPEALMEELPEAPETPESRGRPETAGPSSDLFRQYLREIGRIPLLCAADEVELARRVEAGLFAEERLASTPDPDTRLAVDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAEQLDLTPERVGEVLRLAQEPVSLHAPVGEEEDVALGDLIEDGDAASPVESAAFLLLREHLEAVLSTLNERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
>NZ_CP027306.1|WP_114244393.1|2973821_2975729_-|DNA-primase
MAGRINDDDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYEEGGYNPSHQRGERIRLVEAHKVAAQFYVEQLDSPEAEIGRKFLAERGFDQAAAAHFGVGYSPAGWDHLTRYLRGKGFSDKELITSGLSQDGRRGPIDRFRGRLMWPISDTSGEVVGFGARKLRDDDNGPKYLNTPETSIYKKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGITTAIATCGTAFGGDHIKILRRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAAETYIAIAPDNMDPCDLRLAKGDEAVRDLVEPRTPLFEFALRQIVGRYDLETPAGRGAALDEAAPVVARIKNSSSQHEVAVQLAGMLGILDTQFVVKRVGQLARWARERGEQRGPAQAPSRGGPQPQQVRAPAATSGPALNLRSPAHRTERELLKLALQKPALVSPAFDAYGADEFTAPPYAAVRQCIAEAGGAETGVPETREYLVQVLDAAPNDTVRNLVTELAVEVFHGKTIDETYAGMQLVQVRLRAVDRRINDVQGSLARLGSNVAPDHLAAAQNEVWVLQQYAQALRNNGADAL
>NZ_CP027306.1|WP_114244394.1|2975874_2977134_-|FAD-dependent-oxidoreductase
MVDAHRTFVIVGGGLAGAKAAETLRAEGFSGRVILLGDERDHPYERPPLSKGYLTGKEERDSVFVHETAWYAGADIELHLGQPVTSLDREARSVQLGDGTVVHYDKLLLATGAEPRRLPIPGTDLAGVHHLRRLAHSDRLRNVLASLGRDNGHLVIAGAGWIGLEVAAAARGYGAEVTVVEPEPTPLHQVVGPELGQIFTDLHSDHGVRFHFGVRLAEIIGQDGLVLAVRTDDGEEHPAHDVLAAIGAAPRTALAEAAGLDMAARKDGGGIAVDASLRTSDPHIFAAGDVANVAHPLLGARLRVEHWANALNSGPAAARAMLGKDVSYDRVPYFFSDQYDLGLEYSGWAPPGSYDQVVIRGDAGKREFIAFWLKDRRVLAGMNVNVWDVTETVQELIRSGRQVDPDALADPSVPLVSLN
>NZ_CP027306.1|WP_114244395.1|2977316_2978639_-|deoxyguanosinetriphosphate-triphosphohydrolase
MDGMDGTQGTQDHGMAPYGAADAERWDTEPDKRPGRTAFQRDRARVLHSAALRRLAGKTQVVTPGTRSHAWDASPRTRLTHSLECAQVGRELGAALGCDPDLVETACLAHDLGHPPFGHNGEQALNDFASDCGGFEGNAQSLRLLTRIEPKRFVPDTRTGELVSVGLNLTRAALDAATKYPWPRGGHPFDPGSPKFGVYEDDLPVFEWARQGAPKDRKCFEAQVMDWSDDVAYSVHDFEDGLHAGHIDPNCLYAEPERNEIWAVAIGRYVPVDTEPEELADALDRLIGQDWWPHGYDGSAVAQARLKDATSQLIGRFCLAAESSTRLAYGTGRLGRYGAELVVPREARNECAVLKAVADRYVMQRAEQEAIRADQRIVIAELAAALTARAPEGLEPQFRALFYAAHDDDRARKRVLVDQIAALTDASARSLHASLTGRRR
>NZ_CP027306.1|WP_114248984.1|2979319_2980117_-|HAD-family-phosphatase
MIASDLDGTLLRNDGTLSPRTLRALRTAESAGAEVVLVTARPPRFVDRLAEAAGLAGTAVCSNGALVYDIGTRTVVSSRALPLATARRVATALAAAVPEIGFALETGSHVLYEPAYRLRLSEDIDAELPVPSLADLWLTDLPVTKLLAWSDRLDADALLAAAEEGAGGEVQLTHSGGRGLLEISASGVTKAGTLSMLCAGRGIDATEVIAFGDMPNDLTVLDWAGTGYAMGNAHPSVLAAIRTHTLSNEEDGVAHVIERLFGGTA
>NZ_CP027306.1|WP_157987094.1|2980197_2980509_+|hypothetical-protein
MPGPSGVSTGTPCLVRLVQPALVPEQFAGLVVHAVAEPAEDVPDRAAQGGPLVRRPGAVPRVRTAEVLLEELPQRAEFVGERTGTRNPSASPCWQAVPPYCCW

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Crispr_ID: NZ_CP027306_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_5

3268840-3268938

Orphan

Consensus_repeat	Method
CCTCGCCGCCCCCGTCGTCGTGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_5

>merge|NZ_CP027306|5|3268840-3268938|CRISPRCasFinder
CCTCGCCGCCCCCGTCGTCGTGCTCGCGATGGTCCCTGCCCTCCAGTTCGACAACTGGCAGTGGCTCTCCCTCACCCTCGCCGCCCCCGTCGTCGTCTG

>NZ_CP027306|5|5|3268840-3268938|CRISPRCasFinder
CCTCGCCGCCCCCGTCGTCGTGCT	CGCGATGGTCCCTGCCCTCCAGTTCGACAACTGGCAGTGGCTCTCCCTCAC
CCTCGCCGCCCCCGTCGTCGTCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_114244588.1\|3264577_3265579_-\|5-dehydro-2-deoxygluconokinase	unknown	unknown	gnl\|CDD\|275175
NZ_CP027306.1\|WP_114244589.1\|3265710_3266661_+\|TIM-barrel-protein	unknown	unknown	gnl\|CDD\|275172
NZ_CP027306.1\|WP_114244595.1\|3272703_3275004_-\|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl\|CDD\|273632
NZ_CP027306.1\|WP_114244600.1\|3278661_3279486_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP027306.1\|WP_114244597.1\|3276492_3276984_-\|DinB-family-protein	unknown	unknown	gnl\|CDD\|368218
NZ_CP027306.1\|WP_114244585.1\|3260881_3262771_-\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	unknown	unknown	gnl\|CDD\|275170
NZ_CP027306.1\|WP_114244592.1\|3267936_3268245_+\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|225328
NZ_CP027306.1\|WP_114244596.1\|3275356_3276271_-\|DUF504-domain-containing-protein	unknown	unknown	gnl\|CDD\|367951
NZ_CP027306.1\|WP_114249016.1\|3280436_3280886_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381605
NZ_CP027306.1\|WP_114244594.1\|3271275_3272574_-\|citrate-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_CP027306.1\|WP_114244598.1\|3277166_3277673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114249015.1\|3278230_3278431_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114249014.1\|3258678_3259143_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|214834
NZ_CP027306.1\|WP_114244599.1\|3277880_3278234_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114244591.1\|3267436_3267634_+\|MarR-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP027306.1\|WP_114244590.1\|3266779_3267193_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP027306.1\|WP_114244587.1\|3263645_3264581_-\|deoxyribose-phosphate-aldolase	unknown	unknown	unknown
NZ_CP027306.1\|WP_114244601.1\|3279472_3279697_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP027306.1\|WP_114244584.1\|3259369_3260869_-\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP027306.1\|WP_114244586.1\|3262767_3263649_-\|5-deoxy-glucuronate-isomerase	unknown	unknown	gnl\|CDD\|377429

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_114244588.1\|3264577_3265579_-\|5-dehydro-2-deoxygluconokinase	gnl\|CDD\|275175	TIGR04382, myo-inositol_catabolism_protein, 5-dehydro-2-deoxygluconokinase. All members of the seed alignment for this model are translated from the iolC gene of known or putative inositol catabolism operons. Members with characterized function are 5-dehydro-2-deoxygluconokinase, the enzyme catalyzing the fifth step in degradation from myo-inositol or closely related compounds. Note that many members of this family are fusion proteins with an additional C-terminal domain, of unknown function, described by pfam09863. [Energy metabolism, Sugars].	3.33035e-146
NZ_CP027306.1\|WP_114244589.1\|3265710_3266661_+\|TIM-barrel-protein	gnl\|CDD\|275172	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase. Members of this family include the enzyme myo-inosose-2 dehydratase, product of the gene iolE, as found in inositol utilization cassettes in many species. [Energy metabolism, Sugars].	2.04913e-43
NZ_CP027306.1\|WP_114244597.1\|3276492_3276984_-\|DinB-family-protein	gnl\|CDD\|368218	pfam04978, DUF664, Protein of unknown function (DUF664). This family is commonly found in Streptomyces coelicolor and is of unknown function. These proteins contain several conserved histidines at their N-terminus that may form a metal binding site.	1.50151e-49
NZ_CP027306.1\|WP_114244600.1\|3278661_3279486_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.00647e-09
NZ_CP027306.1\|WP_114244585.1\|3260881_3262771_-\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	gnl\|CDD\|275170	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase. Members of this protein family, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase (iolD), represent one of eight enzymes in a pathway converting myo-inositol to acetyl-CoA. IolD hydrolyzes the cyclic molecule 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione to yield 5-deoxy-D-glucuronic acid. TPP is a cofactor. [Energy metabolism, Sugars].	0
NZ_CP027306.1\|WP_114244592.1\|3267936_3268245_+\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	1.11083e-12
NZ_CP027306.1\|WP_114244596.1\|3275356_3276271_-\|DUF504-domain-containing-protein	gnl\|CDD\|367951	pfam04457, DUF504, Protein of unknown function (DUF504). Family of uncharacterized proteins.	5.4155e-24
NZ_CP027306.1\|WP_114249016.1\|3280436_3280886_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381605	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	3.97658e-30
NZ_CP027306.1\|WP_114244594.1\|3271275_3272574_-\|citrate-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP027306.1\|WP_114249014.1\|3258678_3259143_-\|acyl-carrier-protein	gnl\|CDD\|214834	smart00823, PKS_PP, Phosphopantetheine attachment site. Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups.	5.46595e-16
NZ_CP027306.1\|WP_114244590.1\|3266779_3267193_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	9.27e-12
NZ_CP027306.1\|WP_114244595.1\|3272703_3275004_-\|ATP-dependent-RecD-like-DNA-helicase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP027306.1\|WP_114244601.1\|3279472_3279697_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	1.85802e-22
NZ_CP027306.1\|WP_114244584.1\|3259369_3260869_-\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP027306.1\|WP_114244586.1\|3262767_3263649_-\|5-deoxy-glucuronate-isomerase	gnl\|CDD\|377429	pfam04962, KduI, KduI/IolB family. This family includes the 5-keto 4-deoxyuronate isomerase enzyme EC:5.3.1.17 that is involved in pectin degradation. This family aldo includes bacterial Myo-inositol catabolism (IolB) proteins. The Bacillus subtilis inositol operon (iolABCDEFGHIJ) is involved in myo-inositol catabolism. Glucose repression of the iol operon induced by inositol is exerted through catabolite repression mediated by CcpA and the iol induction system mediated by IolR. The exact function of IolB is unknown. Members of this family possess a Cupin like structure.	2.3543e-104

>NZ_CP027306.1|WP_114244592.1|3267936_3268245_+|heavy-metal-associated-domain-containing-protein
MTTETQLPQATGSCCSPSGSCHDGADSGAPAGGVTTVYQVTGMTCGHCEGAVSEEISGIEGVTSVKAVASTGQVTVVSRAPLAEDAVRAAVDEAGYELVGRA
>NZ_CP027306.1|WP_114244591.1|3267436_3267634_+|MarR-family-transcriptional-regulator
MTDRKLWSYKDIAAHIRVQPDTVRSYRKHGHLPSPDHVESGKPYWYADTIRAWVASRPGNRGRRD
>NZ_CP027306.1|WP_114244590.1|3266779_3267193_+|peptidoglycan-binding-protein
MIRKMLSSRRTAGASALTVVALAAALAAAPGASADEYNPPPPPGSSPVCAFYDGDGLTMYGERGDRVSQVQCMLANRHYLPWSALDGTFGPQTLLAVQRFQADNPPLVPDGLVTPVTWSALWHAGPTRTSPLPYPPT
>NZ_CP027306.1|WP_114244589.1|3265710_3266661_+|TIM-barrel-protein
MTSSAVAPARIRIGSAPDSWGVWFPDDPQQVPWQRFLDEVSEAGYEWIELGPYGYLPTDPARLADETRRRGLTVSAGTVFTGLHHGTDVWDRTWAHVADIAALTRAMGAGHLVVIPSFWRDDRTGEVLEDRSLTAEQWRSLTTQTERLGREVQDRFGLRIVVHPHADTHIDSEENVSRFLDATDPELVSLCLDTGHYAYCGGDSVKLIETYGERIGYLHLKQVDPEVLAEVVADEVPFGPAVARGVMCEPPGGVPALEPVLAAARKLDVDLFAIVEQDMYPCPPDKPFPIARRTRDFLRSCAARTGHSDTPSGPGK
>NZ_CP027306.1|WP_114244588.1|3264577_3265579_-|5-dehydro-2-deoxygluconokinase
MPELYDVITMGRIGVDLYPLQTGVPLARVETFGKFLGGSPANVAVAAARLGRRTAVVTRTGRDAFGEYLHHELREFGVDDRWVTPVDAYPTPVTFCEIFPPDDFPLYFYRQPKAPDLEIHESELDLDAVRSARVFWMTGTGLCAEPSRTSTLAALRARDRSGITVFDLDWRPMFWDTTEAIPKATSDATARYREALAHATVAVGNLDECEIATGEREPYAAARALIAAGVELAVVKQGPKGVLAVHRDGTVADVPPLPVEVVNGLGAGDAFGGALCHGLLAGWETERVMRYANAAGAIVASRLACSSAMPFPYEVEAALTEGAVTSRPTGATP
>NZ_CP027306.1|WP_114244587.1|3263645_3264581_-|deoxyribose-phosphate-aldolase
MTPPASSVSELVQLRMRHPEAVAEAAARRRRRPLVGSGGRLMIIAADHPARGSLAVGDRELAMANRFELLERLCLALSRPGVDGVLATADILDDLLLLGALENKVVVGSMNRGGLAGAAFELDDRFTGHRPEDLARLRFDAGKLLLRIDYDDPGSLDTMHATARAIDAMAAHRLPVFVEPFLCRRMDGHVRNDLGAEAVTTSIAIASGLAGTSAYTWLKVPVTENPDDMARVMEASTLPAVLLGGEVGDDLDGAFEKWRTTLQLPTVQGLVVGRSLLYPADGEVAAAVDTAVSLLEPRGTGGDRVSSREWV
>NZ_CP027306.1|WP_114244586.1|3262767_3263649_-|5-deoxy-glucuronate-isomerase
MTTHNEPRYHLGAGSAASGPYALDIDPKRAGWDRSSLRVLELGPGGVHTLVTGESEWIVLPLTGGCTVHTSGEIFELLGRESVFSGVSDFAYVPRDAHAQIASGAGGRFALAGAKCERRLPARYGPAPEVPVELRGSGNCSRQVNNFAAADTFECDRLIAVEVLTPGGNWSSYPPHKHDEHRPGVESVLEEIYYFEVENDGLGYHRVSPSRDGGTDVLAEVRSGDAVLVPDGWHGPSIAAPGRTLYYLNVMAGPGEQREWLISDHPDHGWIRDTWPSQPVDPRLPLHGPEATS
>NZ_CP027306.1|WP_114244585.1|3260881_3262771_-|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)
MSAPRTRRLTTAQALVSFLSRQYTERDGRRQRLISATWGIFGHGNVAGVGQALVESGRAMPYLQGRNEQAMVHAAVGYARQSGRLSAHAVTTSIGPGATNLVTGAALATINHIPVLLLPGDTFATRPADPVLQQLEVPSAGDVSVNDCLRPVSRYFDRITRPEALIPAALQAMRTLADPAETGAVTLALPQDVQAQAHDWPQEFFAERIWYVRRPAPDPHELDRAVRAVRSARRPLIVAGGGVHHSAAQETLAAFAAATRIPVAATQAGKGSLRHDHPADVGGIGHTGTATADELARTADLVIGIGTRYSDFTTASATLFADPAVRFLNLNITGFDAHKLGALPLVADARTALEALTAALAARNHRVDPSYEAEYTEAKEKWERRVTAAFTADDPHARPTQAQVLGLLDALVTEDDILINAAGSLPGDLHKLWRARSPHQYHVEYGYSCMGYEIPAAIGVQLAAPDRPVWALVGDGTYLMNPTEIVTAVQQELPVKLVILQNHGYASIGGLSETVGGERFGTAYRHRAADGAFTGPPLPVDLAANAGSLGMRVLRAKTVRDLREALAEARVADRPTCVYVETETADTVSGPPPAQAWWDVPVAETATRPSAVKAREEYDRHVADRRHHL
>NZ_CP027306.1|WP_114244584.1|3259369_3260869_-|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MKTVNHWIGGKTVEGASGNYGPVTDPATGAVTTQVALASLEEVDAAVAAAKDAYATWGTSSLAARTAVLFRYRALLDAHRDEIAALITAEHGKVHSDALGEVARGLEIVELACGITTQLKGELSTQVSSRVDVSSIRQSLGVVAGITPFNFPAMVPMWMFPLAIACGNTFVLKPSEKDPSAANLLAELAAEAGLPDGVLNVLHGDKVAVDGLLNHPDVAAVSFVGSTPIARYIHTTASTNGKRVQALGGAKNHMLVLPDADLDAAADAAVSAAYGSAGERCMAISAVVAVGSIADELVAKIKERAEKIKIGPGNDPASEMGPLITAAHRDKVASYVKGAAAQGADVVLDGTGFTVEGFEDGHWIGLSLLDNVSTDSDAYKDEIFGPVLCVLRTETYEEGVALMNASPFGNGTAIFTRDGGAARRFQLEIEAGMVGVNVPIPVPVGYHSFGGWKDSLFGDHHIYGNDGVHFYTRGKVVTTRWPDPADAPAGVDLGFPRNH
>NZ_CP027306.1|WP_114249014.1|3258678_3259143_-|acyl-carrier-protein
MAVSAVDERPSGPETVGAATVVDDLLDLPRSERRQALEDLVVAEFKIVLLMDDGDELPLDESYFDLGLTSLTITDLKQSLESMIGHELSASLLFNSPTVGQLMDHICDELLPGLFRPASVSAPANGPASAAASRSADHSADALVDEALKNLYQG
>NZ_CP027306.1|WP_114244594.1|3271275_3272574_-|citrate-synthase
MSEHTNNAVVLRYGDGEYTYPVVDSTVGDKGFDIGKLRANTGLVTLDSGYGNTAAYKSAITYLDGEQGILRYRGYPIEQLAERSTFLEVAYTLINGELPKVDELSAFKNEITQHTLLHEDVKRFFDGFPRDAHPMAMLSSVVSALSTFYQDSHNPFDEEQRHLSTIRLLAKLPTIAAYAYKKSIGHPFVYPRNDLGYVENFLRMTFSVPAQEYDLDPVVVSALDKLLILHADHEQNCSTSTVRLVGSSQANMFASISAGISALWGPLHGGANQSVLEMLEGIQANGGDVDSFIRKVKNKEDGVRLMGFGHRVYKSFDPRAKIIKAAAHDVLSALGKSDELLDIALKLEEHALSDEYFVSRNLYPNVDFYTGLIYRAMGFPTEMFTVLFALGRLPGWIAQWHEMIKEPGSRIGRPRQIYTGEVLRDFVPVEGR
>NZ_CP027306.1|WP_114244595.1|3272703_3275004_-|ATP-dependent-RecD-like-DNA-helicase
MSNMAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGSLLGAQVGESLRMEGRWSSHSQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDVIEQEPKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYEDASISVVKNQPYRLAADVWGIGFLTADKIAQAVGIPHDSPERVKAGLQYALSQSTDQGHCFLPEERLIADGVKLLQVDTGLVIECLAELAEDPEGVVREKVPSPEGGEPITAIYLVPFHRAEVALAAQVQRLLRTPEDRLPAFVDVDWDKALTWLAGRTGAKLAPEQEAAVRLALSRKVAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLLKAVAPGAHLLLVGDVDQLPSVGAGEVLRDLLADGSPVPAVRLTTIFRQAQQSGVVTNAHRINSGVPPLTQGLNDFFLFVEDETQDAGVLAVDVAARRIPAKFGLDARRDVQVLAPMHRGPAGAGTLNGLLQQAITPGRPDLPEKRFGGRVFRVGDKVTQIRNNYDKGENGVFNGTVGVVTALDLDEQRLTVLTDEDEEIGYDFDELDELAHAYAMTIHRSQGSEYPAVVIPVTKSAWMMLQRNLLYTAVTRAKKLVVLVGSRQAIGQAVRTVSAGRRCTALDYRLSGGLGGGSPEKMIDQIGGKHHGGLPEPESRGQDE
>NZ_CP027306.1|WP_114244596.1|3275356_3276271_-|DUF504-domain-containing-protein
MRTSDEIYHRVRWDPRFDPARFVLGVSQRGDACKRIPLSSFVPGGDIPWHRVVFIEADGEVVWDRATGVDRIDASGVGRVRDPQADLSFGTSSGRGDPVGVLDVPPTARTAVAWIPPAELWPPIQDIRRDYDPQIHRWPPHVNVLFGFVPESDFERAAPMLAAATAEAPVFTARLDGVRTFRHRAYFTVWLDPTAAGQAPWTHLHRLLQQRFPRCSGPAKNFTPHLSLGRTRDPRRVTADCVTRLDTMTATVWELVLLSRRGDGPMRPRATVALRTGEVRRLPAPGLGAPGPEDTAWLSGITDR
>NZ_CP027306.1|WP_114244597.1|3276492_3276984_-|DinB-family-protein
MPPLDADERTSLTSWLDFYRTTLAQKCEGLDDDRLREASVEPSPMSLLGLVQHMAEVERNWFRRVLAQEDAPSIFTPDADPSADDGGFDLVEGSGYDTALSIWQSEVERARANCAARSLDDTSPFMGGQVTLRWIYTHMIGEYARHCGHADLIRERIDGRTGF
>NZ_CP027306.1|WP_114244598.1|3277166_3277673_+|hypothetical-protein
MALKETLERVDADLAAGRVPMARQRLRGLVSSYPHYPALRRRLADIYRMYGDPAEAGRWTYLEEDRLPDEVAAFEKRYSDPVRRMRALAWQGPESAADSPFVEEQLATVRTAASKALGQPVTWDTLAEVRGDAPEGGSFRGPLAAVGCALLAIMFVAIWVNGFLDLFR
>NZ_CP027306.1|WP_114244599.1|3277880_3278234_-|hypothetical-protein
MNGEQGESRTFRLLPWTAAEGKPCYVLGDGTGYVSRMADGIESIQLGMADDLLGHAADLLADRRVTGAELHFLASRLSESLREVKRVAESRGSRLNASGPVPDNDRPGHREPDIDSR
>NZ_CP027306.1|WP_114249015.1|3278230_3278431_-|hypothetical-protein
MAGPTVRRTGARPLCGEDGPLVRPYLVAYERQVAEARRRSRTLWIAVHAVDIGPRPRPLRRAEVAA
>NZ_CP027306.1|WP_114244600.1|3278661_3279486_+|helix-turn-helix-domain-containing-protein
MAMNRKARTPREKYGEELRLRRTAAGLTQEALGDQVVCSPTLISHYEAGRRLPKPDDAHRLDIALKTDGFFVRWLGDLDSKFAHYFAVVSELEREATEIRQYAASLIPGLLQTDAYARAVFQACRPNYRAEELDEFVVNRLERGRLLSESSTPVAWTLLDEAALRRCIGGPHVMAEQLHKVADMAESGRLRLHVLTFASGAHALLESMVYLLNFADAAPVSYVEGLRTGHLMDDPALVEACHTSYTLALGDAAPLQESVALVRAIAEEHEHAQH
>NZ_CP027306.1|WP_114244601.1|3279472_3279697_+|DUF397-domain-containing-protein
MHSTEPTIADARAMTGWRKSSYSGGSNGECLEVADGYADIPVRDSKTPSGPALVFSADGWSSFVSAVKDNSINA
>NZ_CP027306.1|WP_114249016.1|3280436_3280886_+|transglycosylase-SLT-domain-containing-protein
MSKKFAHMTQTKKISLGMAAAGAAVVAGSLVGAPAASAAPAQSGSSVSNWINQSLEIMRAQGIPGSYHGIHRNLMRESSGNPNAINNWDSNAAKGIPSKGLLQVIDPTFRAYHVPGTSWNIYDPVANITAACNYAAQRYGSIDNVNSAY

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Crispr_ID: NZ_CP027306_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_6

4467263-4467347

Orphan

Consensus_repeat	Method
GCTCGACCAGCGGTACGGGGGACAGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_6

>merge|NZ_CP027306|6|4467263-4467347|CRISPRCasFinder
GCTCGACCAGCGGTACGGGGGACAGGGCTGGGGCCGAACCGGCCGACCACCCGGGCAGCTCCACCAGCGGTACGGGGGACAGGGC

>NZ_CP027306|6|6|4467263-4467347|CRISPRCasFinder
GCTCGACCAGCGGTACGGGGGACAGGGC	TGGGGCCGAACCGGCCGACCACCCGGGCA
GCTCCACCAGCGGTACGGGGGACAGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_114249151.1\|4455164_4455398_-\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl\|CDD\|378324
NZ_CP027306.1\|WP_114245438.1\|4459020_4460076_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP027306.1\|WP_114245446.1\|4472269_4472761_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227231
NZ_CP027306.1\|WP_114245436.1\|4455713_4456586_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|370148
NZ_CP027306.1\|WP_114245437.1\|4456716_4458528_-\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_CP027306.1\|WP_114245450.1\|4476885_4477785_+\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_CP027306.1\|WP_114245445.1\|4469511_4470270_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114245449.1\|4474663_4475974_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP027306.1\|WP_072487501.1\|4461226_4461667_-\|SseB-family-protein	unknown	unknown	gnl\|CDD\|377787
NZ_CP027306.1\|WP_114245440.1\|4461839_4463666_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173842
NZ_CP027306.1\|WP_114245441.1\|4463775_4464399_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP027306.1\|WP_114245443.1\|4465907_4466129_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114249153.1\|4475970_4476621_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP027306.1\|WP_114245439.1\|4460126_4461083_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP027306.1\|WP_114245452.1\|4478696_4479098_+\|SgcJ/EcaC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|274053
NZ_CP027306.1\|WP_114245451.1\|4477856_4478291_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|380093
NZ_CP027306.1\|WP_114249152.1\|4470378_4472205_-\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|271321
NZ_CP027306.1\|WP_114245442.1\|4464514_4465813_+\|M18-family-aminopeptidase	unknown	unknown	gnl\|CDD\|235073
NZ_CP027306.1\|WP_114245447.1\|4472786_4473587_-\|carbon-nitrogen-family-hydrolase	unknown	unknown	gnl\|CDD\|143607
NZ_CP027306.1\|WP_114245448.1\|4473757_4474582_+\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	unknown	unknown	gnl\|CDD\|274422

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_114249151.1\|4455164_4455398_-\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl\|CDD\|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	2.01487e-08
NZ_CP027306.1\|WP_114245438.1\|4459020_4460076_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	5.55439e-47
NZ_CP027306.1\|WP_114245446.1\|4472269_4472761_+\|hypothetical-protein	gnl\|CDD\|227231	COG4894, COG4894, Uncharacterized conserved protein [Function unknown].	9.25412e-32
NZ_CP027306.1\|WP_114245436.1\|4455713_4456586_-\|acyl-CoA-thioesterase	gnl\|CDD\|370148	pfam08840, BAAT_C, BAAT / Acyl-CoA thioester hydrolase C terminal. This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).	6.58961e-23
NZ_CP027306.1\|WP_114245437.1\|4456716_4458528_-\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_CP027306.1\|WP_114245450.1\|4476885_4477785_+\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	6.56586e-54
NZ_CP027306.1\|WP_072487501.1\|4461226_4461667_-\|SseB-family-protein	gnl\|CDD\|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	0.0021227
NZ_CP027306.1\|WP_114245440.1\|4461839_4463666_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173842	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5. Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	0
NZ_CP027306.1\|WP_114245441.1\|4463775_4464399_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.46579e-20
NZ_CP027306.1\|WP_114245449.1\|4474663_4475974_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	2.12997e-33
NZ_CP027306.1\|WP_114249153.1\|4475970_4476621_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	3.39544e-41
NZ_CP027306.1\|WP_114245439.1\|4460126_4461083_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	5.7367e-67
NZ_CP027306.1\|WP_114245452.1\|4478696_4479098_+\|SgcJ/EcaC-family-oxidoreductase	gnl\|CDD\|274053	TIGR02246, hypothetical_protein, conserved hypothetical protein. This family consists of uncharacterized proteins found in a number of genera and species, including Streptomyces, Xanthomonas, Oceanobacillus iheyensis, Caulobacter crescentus CB15, and Xylella fastidiosa. The function is unknown.	3.47064e-35
NZ_CP027306.1\|WP_114245451.1\|4477856_4478291_-\|VOC-family-protein	gnl\|CDD\|380093	pfam18029, Glyoxalase_6, Glyoxalase-like domain. This entry comprises a diverse set of domains related to the Glyoxalase domain. The exact specificity of these proteins is uncertain.	9.37291e-26
NZ_CP027306.1\|WP_114249152.1\|4470378_4472205_-\|redoxin-domain-containing-protein	gnl\|CDD\|271321	cd14951, NHL-2_like, NHL repeat domain of NHL repeat-containing protein 2 and similar proteins. NHL repeat-containing protein 2 (NHLRC2) and related bacterial proteins; members of this eukaryotic and bacterial family are uncharacterized, the NHL repeat domain is found C-terminally of a thioredoxin domain. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	1.00708e-162
NZ_CP027306.1\|WP_114245442.1\|4464514_4465813_+\|M18-family-aminopeptidase	gnl\|CDD\|235073	PRK02813, PRK02813, putative aminopeptidase 2; Provisional.	0
NZ_CP027306.1\|WP_114245447.1\|4472786_4473587_-\|carbon-nitrogen-family-hydrolase	gnl\|CDD\|143607	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	3.65233e-114
NZ_CP027306.1\|WP_114245448.1\|4473757_4474582_+\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	gnl\|CDD\|274422	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083. This protein family pulls together several groups of proteins, each very different from the others. They share in common three conserved regions. The first is a region of about 38 amino acids, nearly always at the N-terminus of a protein. This region has a bulky hydrophobic residue, usually Trp, at position 29, and a His residue at position 37 that is invariant, so far, in over 150 instances. The second conserved region has a motif [DE]xxxHxxD. The third conserved region contains a hydrophobic patch and a well-conserved Arg residue. Most examples are found in the Actinobacteria, including the genera Mycobacterium, Corynebacterium, Streptomyces, Nocardia, Frankia, etc. The pattern of near-invariant residues against a backdrop of extreme sequence divergence suggests enzymatic activity and conservation of active site residues.	4.82318e-25

>NZ_CP027306.1|WP_114245443.1|4465907_4466129_+|hypothetical-protein
MGLGGCIILIGAGAIPAFATDWKMDTVDVDLVGWIMMIVGIIGVFVHASIARRRRMVVPPSTTVVSEDERRYP
>NZ_CP027306.1|WP_114245442.1|4464514_4465813_+|M18-family-aminopeptidase
MSSSLRFDRGHTDDLMAFLMASPSPYHAVATAAERLEKAGFRQVEETAAWDGTSGGKYVLRGGAIVAWYVPEGAAAHTPYRIVGAHTDSPNLRVKPLPDTGAYGWRQIAVEIYGGTLLNTWLDRDLGLAGRISLRDGTHRLVNIDRPLLRVPQLAVHLDRSANPDGLKLDRQKHMQPIWGLGDVEEGDLIRFVAEEAGVDAEDVTGWDLMPHPVEPPAYLGRDRELLAGPRMDNLLSVHSATAALAAVAGQPDAELPYIPVMAAFDHEENGSQSDTGADGPLLGTVLERSVFARGGTYEDRARAFAGTVCLSSDTGHAIHPNYAERHDPTHHPVVNGGPILKVNVNMRYATDGSGRAVFAAACQKADVPWQTFVSNNSMPCGTTIGPITAARHGIQTVDIGVAILSMHSARELCGADDPYLLANAMTAFLAG
>NZ_CP027306.1|WP_114245441.1|4463775_4464399_+|Uma2-family-endonuclease
MGGIMTAEALPKASQLRRDDSKWPVPPPDGYTVDDLFTLHDLPPHTELIDGSLVFVSPQRKFHTLAMYLLEQGLRSHVPEDLRVRREMAVVLGKRNAPEPDLVVVTAEADGDQRQTRYQAADVLLAVEVVSPDSEARDRDTKPHKYAGAGIPNFWLVEMAENDRPVVWTYQLDPVNKTYVSTGVHHDRLKLSAPYDIDIDLTAIDKL
>NZ_CP027306.1|WP_114245440.1|4461839_4463666_+|acyl-CoA-dehydrogenase
MGHYKSNLRDIEFNLFEVLGRDKTYGTGPFAEMDVETAKSILDEVARLAENELAASFADADRNPPVFDPETNTAPVPETFKKSYQAFMDSEYWRLGLPEEIGGTTSPRSLIWSYAELLLGSNPAVWMYSSGPAFAGILFDEGNEAQKKIAEIAVERQWGSTMVLTEPDAGSDVGAGRTKAVAQEDGSWHIEGVKRFITSGEHDMSENIIHYVLARPEGAGPGTKGLSLFMVPKFHFDWTTGELGERNGVYATNVEHKMGLKASNTCEMTFGDQHPAKGWLIGDKHDGIRQMFRIIEFARMMVGTKAIATLSTGYLNALEYAKERVQGTDLSQFMDKTAPKVTITHHPDVRRSLMTQKAYAEGMRSLVLYTASVQDAIQEKEAAGEDAKALHGLNDLLLPIVKGYGSEKSYEQLAQSLQTFGGSGYLQEYPIEQYIRDAKIDTLYEGTTAIQGQDFFFRKIVRDQGASLNALSEEIKKFLAGAQGNEELSGALDSLAKAAVDLEAIVGTMITDLTATGKDVKNIYKVGLNTTRLLMASGDVVVGYLLLKGAAVAAEKLPAASAKDVAFYQGKIAAAKFFAANVLPGVSAERALAESVDNSLMELDEAAF
>NZ_CP027306.1|WP_072487501.1|4461226_4461667_-|SseB-family-protein
MYGYDQNPGAQQQMGGGYGEQPLYPEPSPPSLGDAVRAFTTGSLSAEDFQQIFATSKVYCPRGDNPGFLALHNTQQPVIPMFTTLKELRLYAGKESKYFVITGAEVIDLLPTGYGFVLDMEGEHRMVFDAKAVEQMVDFAMRRMYG
>NZ_CP027306.1|WP_114245439.1|4460126_4461083_-|pirin-family-protein
MPAVTVENPLTLPKVAASGDATARPVLAVTTAPSGFEGEGFPVRRAFAGINYKYLDPFIMMDQMGEVEYAAGEPKGTPWHPHRGFETVTYLIDGTFVHQDSNGGGGTIRNGDTQWMTAGSGLLHIEAPPESLVMSGGLFHGLQLWVNLPKADKMMDPRYQDIRGGQVQLLASPDGGALLRVIAGELDGHEGPGITHTPITMIHATVRPGAEVTLPWREDFNGLAYVLAGRGTVGAERRPVHMGQTAVFGAGSSLTVRADEKQDGNAPDLEVVLLGGRPIREPMAHYGPFVMNSQAELKQAFEDFQAGRLGTVPAVHGM
>NZ_CP027306.1|WP_114245438.1|4459020_4460076_-|AI-2E-family-transporter
MQTPKPLLPDGARRTAAWCGVVLLVTGVAAVAVWLCITFKTAVTPVLLALLGTALLGPVHRRLTARGMNRSLAAGLTCALLVAVVGGAGYIVVTALVDTGDQIVRSLKDAGQWIIDHFGIGKNTNVDDLVANARKLVEKFGASAAGGILSGISLIGSLLATSVLALLLTFFFLRDSDKAVSLAHAVAPRGTGDLVEAMGRRAFEAVQGFMRGTTFIALIDAVCITAGLLILRVPGAVGLGALVFVGAYIPYLGAFLSGAVAILVALADRGLVIALWALGVVLAVQVLEGHVLQPMIQSRTVQMHPATIMIAITAGASVAGLLGMLLAVPACAAAFGILGELRGERSSPSGA
>NZ_CP027306.1|WP_114245437.1|4456716_4458528_-|aspartate--tRNA-ligase
MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNEALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAAPLPFTINTEDGVNEERRLEYRFLDLRRERMHRNIMLRSAVIASIRAKMVALGFNEMATPILTATSPEGARDFVVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFVEQEDVFRPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGNDKPDLRAQLELVDISDIFADSEFKAFAGKHVRALPVPDTAGQSRKFFDGLGDYAVQHGAKGLAWVRVGEDGTLAGPIAKFLTETDIKTLTERLSLVPGHAVFFGAGEFDEVSKIMSVVRVEAAKRAGHFEEGVFRFCWVVDFPMYEKDEDTGKIDFSHNPFSMPQGGMKDLEEKDPLDILAWQYDIVCNGIELSSGAIRNHEPDVMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLDEARLRELNIQLRKPAATAKEKAEDLVVRDAGAK
>NZ_CP027306.1|WP_114245436.1|4455713_4456586_-|acyl-CoA-thioesterase
MEIIERTLSEPCEGVLVEPEGGSAVGVLVLAGSSGRIDTDRCRVLARAGMTALSIRWFGGERQPEGICEIPLETFVEAIDFLKARGSGRVGVLGLSKGAEAALLVAVRDPRVNAVVALSPTSVVWANVGPGTDGVAYPYRSSWTWKGEPVPFVPYDEHWTPQGPEGAPIACRTLYEQSWQAFAEAAQKAAIPIERSAAEIVLIAGGDDQMWPSLVFAQELAARRAPAGQHPARLVTSSDAGHRPRLPGEGPAGRSGQFRYGGTAETDAALGARAWSDIIAVLSGDLHSGG
>NZ_CP027306.1|WP_114249151.1|4455164_4455398_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MSVTQIDLDDEALAEAMRLMGATTKKETVNAALRDYVARIRRLEAAEKLAQRGERGEFEKAAAAYDAVKRARRAAFE
>NZ_CP027306.1|WP_114245445.1|4469511_4470270_+|hypothetical-protein
MSTLRNRTTILAAATTAVLALALTACGGDDSGTKSAGPASDAAAAAASTDATDAKTTGTAKTGGAGQNTGATKTGTSKTGTSKTGTSNGSAKTGGDTSDSYAYKHPCKSADLSVRVYPRQGSTTQQVIEVNNVGANSCGLSYFPRVSLGAAKASDHSSDIQPTVPGGLGGAPAYPVKPKTAAIAVIDLNPSGANGLTWIDEMNVLADGDHMPNAETQNFELGPDVKVRDPKLGLYRSTVAEAVSSMKQAGTS
>NZ_CP027306.1|WP_114249152.1|4470378_4472205_-|redoxin-domain-containing-protein
MATRARVRAPELVGRGGWLNTGDQQYTLADLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDTVVIIGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVVAQHAGEGHAYAIAKLVEELEAEHGAKGTLRRGDGPYVAPEPVATHLRFPGKALLLPDGGFLVSDTTRHRLVEIERDGETVRRHIGTGDRGIADGGPEGVRFSEPQGLAVLPDGRIAVADTVNHAIRALDLTTGLTTTLAGTGRQWWQGSPTTGPAREVDLSSPWDVAWFADRLWIAMAGVHQLWTYEPATETVQVAAGTTNEGLVDGPADEAWFAQPSGLATSADGERLWVADSETSALRYVERDGTGFAVRTAVGTGLFDFGHRDGAADQALFQHPLGVTALPDGSVAVCDTYNHALRRYDPASGEVTTLATDLREPSDAVLVEGDLVVVESARHRLTRLRLPEEAVRVAGQAHHTQRAATEITPGTLRLDVVFQAPAGQKLDTRYGPSTRLLVSATPPELLAEGSGPGTDLFRDLVLADGVTEGVLHVSAMAASCDDDPENEYPACHVHQQDWGVPVRVTAEGTPRLPLVLAGMDEQA
>NZ_CP027306.1|WP_114245446.1|4472269_4472761_+|hypothetical-protein
MKFLVRERLFAVGDDYWIEDADGRKVFLVDGKAMRVRDTFELKDAQGRILVEIRQKLLSLRDTMLIERDGEQLARIKRKRLSLLRNHYRVTLVDGTELDVSGKILDREFAIDYDGELLAQISRRWLTVRDTYGIDVVREDADAALLVAVSVCVIVLADKEHEG
>NZ_CP027306.1|WP_114245447.1|4472786_4473587_-|carbon-nitrogen-family-hydrolase
MRASLIQIAVDPDESVNSRRRRAASLIAAQHGADLVVLPELWPVGAFAYTAFADEAEPLQGPTHDIMAKAAADAGVWLHAGSFVERAADGTLYNTTLAFTPEGERAAAYRKIHRFGFDKGEAVMMGAGEELVTVALPQTTLGLATCYDLRFPEMFRGLVDAGAETLIVAAGWPERRRAHWTLLARARAVENQSYVLAVGTAGTHAGIQQAGHSIVVDPWGEVLAEAGADEEVLTVEFDPSKVAATREQFPALKDRRLGLARPETGK
>NZ_CP027306.1|WP_114245448.1|4473757_4474582_+|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme
MTVHPSLQTYADAWTHSIESIAELVKPLAEGEWNRRTPCPAWSVRDIVSHVIGMECEQLGDPRPIHTLPRDLYHVQNDFARYMEMQVDVRRHHTAPEMTSELEYTIIRRARQLRNETRDPETMVRAPLGAEQTLELALRMRAFDVWVHEQDLRATLGKPGNLDSPGASVVRDTLLAALPKVVAKDAGAPANSAVVIDVHGPMEFLRTVRVDAEGRGSVDGSPSLGPAVTLAMDWETYSRLACGRVRAGAVADRIKVEGDQDLAEAILQNFAVTP
>NZ_CP027306.1|WP_114245449.1|4474663_4475974_-|MFS-transporter
MSSAAAPTLSLPGDPPGGRRAAWVWGIGVAVYFVAIIFRTSLGVAGLDAADRFHVNASALSTFSILQLLVYAGMQIPVGLMVDRLGTKKVLTLGAVLFTLGQLGFALSPSYGMALASRALLGCGDAMTFISVLRLGARWFPARRGPLIGQVAALFGMAGNLVSTLFIARALHGFGWTTTFVGTSAAGVLVLVPLLLFLKDHPEGHEPPPVEHAGAAYVRKQIAASWREPGTRLGMWVHFTTQFPAMVFLLLWGLPFLVEAQGLSRSTAGELLTLVVLSNMAFGLVYGQIIARHHEARAPLALGTVTVTALLWASTIFYPGDRAPMWLLIVLCVVLGVCGPASMIGFDFARPANPPERQGTASGIVNMGGFIASMTTLFAVGVLLDATGDNYRIAFASVFVLEALGVVQILRLHSRATHREREHHVISRVEAVHVPA
>NZ_CP027306.1|WP_114249153.1|4475970_4476621_-|GntR-family-transcriptional-regulator
MKSAVKQPPAAERVYAHIKEAVLDRRYEGGTLLTEGDLATAVGVSRTPVREALLRLEVEGLIKLYPKKGALVLAVSAQEIADVVETRLLVEEFAARKAVPASAQLIGRLEKLLQEQRQLAEAGDLAAVSVKDRCFHAEIVRNAGNDILSRLYDQLRDRQLRMGVAVMEAHPGRIADNITEHGELLEAIRSGDADGAAQVVRRHVGRVKVLVRGEDR
>NZ_CP027306.1|WP_114245450.1|4476885_4477785_+|D-alanyl-D-alanine-carboxypeptidase
MKIGIKGINRVSATATVALTAGAVIAGSVFASTAQAATPPTPTITAKGGYVMNNGTAKTLYAKAADTRRSTGSTTKIMTAKVVLSQKNLNLDSKVTIQKAYSDYIVSKGASSARLIVGDKVTVRQLLYGLMLPSGCDAAYALADKFGSGTTRAARVKSFIGKMNAQAKSLGLKNTHFDSFDGIGNGSNYSTPRDLTKIASSAMKSSTFRTVVKTKSTKQKVTTKSGGYRYMSWSNTNAMLSSYSGAIGVKTGSGPTAKYCLVFAATRNGKTVIGTVLASTSAANRSADMKKIMDYSFKK
>NZ_CP027306.1|WP_114245451.1|4477856_4478291_-|VOC-family-protein
MASVKKIQITFDCADPERAARFWCEVLGYVAPPPPEGFDTWDAYNDSLPPEERGAWFACSDPTGEGPRMYFQRVPEGKVAKNRVHVDVRAGTGLVGAERLAVLEAERDRLVALGAVCTKVLYADENNESCINMQDIEGNEFCLD
>NZ_CP027306.1|WP_114245452.1|4478696_4479098_+|SgcJ/EcaC-family-oxidoreductase
MICMNTETADIKAIEQVVATVERAQRAKDVEGFLTLFHPDALWTTGHGKVLIGFDAIAEFTRTVLPAANWEGEITYEAVHTQFLRPDVAAVKVRQVYHSPEGETEGAPLYVMTKQDDGRWLLHACQNTAVWVE

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Crispr_ID: NZ_CP027306_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_7

5016541-5016621

Orphan

Consensus_repeat	Method
GCGACTTCGAGGCAGTCGCCGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_7

>merge|NZ_CP027306|7|5016541-5016621|CRISPRCasFinder
GCGACTTCGAGGCAGTCGCCGCCGCTGCCGTCGCTGTACGTGGACTTTCGCCAGGTCGCGACTTCGAGGCAGTTGCCGCCG

>NZ_CP027306|7|7|5016541-5016621|CRISPRCasFinder
GCGACTTCGAGGCAGTCGCCGCCG	CTGCCGTCGCTGTACGTGGACTTTCGCCAGGTC
GCGACTTCGAGGCAGTTGCCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_072487928.1\|5005710_5007333_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP027306.1\|WP_114245839.1\|5012511_5013102_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP027306.1\|WP_114245835.1\|5009149_5010043_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_157987145.1\|5008865_5009090_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114245842.1\|5016672_5017515_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP027306.1\|WP_114249202.1\|5018205_5018667_-\|calmodulin-binding-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114245843.1\|5017626_5017878_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114245845.1\|5018784_5019405_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_CP027306.1\|WP_114245848.1\|5021412_5022780_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP027306.1\|WP_114245849.1\|5022833_5023511_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP027306.1\|WP_114245847.1\|5020604_5021432_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227049
NZ_CP027306.1\|WP_114245840.1\|5014977_5016330_+\|erythromycin-esterase-family-protein	unknown	unknown	gnl\|CDD\|350610
NZ_CP027306.1\|WP_114245844.1\|5017867_5018101_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114245833.1\|5007499_5008741_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366166
NZ_CP027306.1\|WP_157987146.1\|5010450_5010915_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114245838.1\|5011208_5012399_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP027306.1\|WP_114245846.1\|5019523_5020558_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381626
NZ_CP027306.1\|WP_114245837.1\|5010984_5011203_-\|ferredoxin	unknown	unknown	gnl\|CDD\|379145
NZ_CP027306.1\|WP_157987147.1\|5023591_5023816_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114249201.1\|5013154_5014762_-\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_072487928.1\|5005710_5007333_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP027306.1\|WP_114245839.1\|5012511_5013102_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.97007e-15
NZ_CP027306.1\|WP_114245842.1\|5016672_5017515_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.20686e-06
NZ_CP027306.1\|WP_114245847.1\|5020604_5021432_+\|hypothetical-protein	gnl\|CDD\|227049	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown].	1.31924e-94
NZ_CP027306.1\|WP_114245848.1\|5021412_5022780_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.93057e-34
NZ_CP027306.1\|WP_114245849.1\|5022833_5023511_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.11215e-73
NZ_CP027306.1\|WP_114245845.1\|5018784_5019405_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	2.61418e-17
NZ_CP027306.1\|WP_114245840.1\|5014977_5016330_+\|erythromycin-esterase-family-protein	gnl\|CDD\|350610	cd14728, Ere-like, Erythromycin esterase and succinoglycan biosynthesis related proteins. This group contains erythromycin esterase, which shares conserved active site residues of the Tiki/TraB family. Erythromycin esterases (EreA and EreB) disrupt erythromycin via the hydrolysis of the macrolactone ring. A critical catalytic histidine acts as a general base in the activation of a water molecule. Macrolides act by inhibiting bacterial protein synthesis by binding at the exit tunnel of ribosomal subunit 50s, blocking the translation of the polypeptide. Erythromycin esterase, typically found in integrons and transposons, confers antibiotic resistance through the disruption of the drug ring structure. EreB substrate profile is substantially broader than that for EreA, being able to also metabolize semisynthetic derivatives such as azalide azithromycin.	1.99217e-104
NZ_CP027306.1\|WP_114245833.1\|5007499_5008741_-\|hypothetical-protein	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	0.00147894
NZ_CP027306.1\|WP_114245838.1\|5011208_5012399_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.98366e-97
NZ_CP027306.1\|WP_114245846.1\|5019523_5020558_+\|hypothetical-protein	gnl\|CDD\|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	1.17575e-07
NZ_CP027306.1\|WP_114245837.1\|5010984_5011203_-\|ferredoxin	gnl\|CDD\|379145	pfam13370, Fer4_13, 4Fe-4S single cluster domain of Ferredoxin I. Fer4_13 is a ferredoxin I from sulfate-reducing bacteria. Chemical sequence analysis suggests that this characteristic [4Fe-4S] cluster sulfur environment is widely distributed among ferredoxins.	5.32309e-08
NZ_CP027306.1\|WP_114249201.1\|5013154_5014762_-\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	1.93959e-33

>NZ_CP027306.1|WP_114245840.1|5014977_5016330_+|erythromycin-esterase-family-protein
MARHRKRISRRVLLATAAVATGAVLAPVAVQAATADTAGREQNPVRALEQAAHPLRTTEPGGNTADLRALGSMIGDAKVVGLGEATHGSHEFFTMKERVFRHLVEKKGFTTFALELSWSAGLQIDDYLQTGKGDARKIAKETLTNSPWDREEFVSLIEWMRDYNRHHPDRTVHFMGDDIGAPSLSDEFFGRVTGYVQKNNPEALPRLNELYTGLRPIDDVFAYLGKPLAERQQLAVKAQQALELVSGLKGSGGDAFDWAEQNARSVAQTAKFLTLNPDDPESNADSQRFRDEVMAQNVSWWQQRTGQKVLLSAHNDHVAYVASDPETYSKTQGSFLRDTMGKNYLPIGFTFNQGSFLSKDAALGGEWKKFTVPAAEPDRNEATLDKVRYRDFYLDIRTAPAAARDWLNAARPTLNVGTLFPEEPRDAAIAKSYDVLIHLHEVREADKLKP
>NZ_CP027306.1|WP_114249201.1|5013154_5014762_-|adenosine-deaminase
MISTIRTARRPKSLIPAGLGALTVLSLLPAIPATAAPVKDPSARPAAHTSPRAVTQAERRTAAYLDSLRNRPERLKAFFKALPKGGDLHSHLSGAARTEFLIKLAGEKGLCIDATMTAVAPPCGPGKRPAIDAQTDATFRQQIVRAWSMQDFPATQSGHDHFFDTFGKFSLATWDRGKLLADVADTVVEQNQFYLETMVTPASDSARRLAEAVGYDPDFAAFHRKLLAGGQLDRVVDDAVREADDADAQFRAAAHCDTARPDPGCRLPVRWISQVSRGSTPARVFTQIAVGMRLAERDPRFVAVNLVQPEDGESALANYSLQMRMLNYLRGQYPGAHLTLHSGELAPGLVKPEDLTFHIREAVLVAGAERIGHGVDLVHEDDWRQIARTMAQRKVAVEVPFSSNKQILGIAGDDHPFNAYRRYGVPVVLSTDDPGVSRIDISHEYQYAAKTYGLRYTELKDLARASLEYAFRNGRSLWATGSAPSDYRLVDACRSDRPGTDHPSARCARYLADNPKAATEWRQETAFATFESRHR
>NZ_CP027306.1|WP_114245839.1|5012511_5013102_+|helix-turn-helix-transcriptional-regulator
MEPAPAPPSGERRRDAAATRRRLLEAARDLFAERGYEGTTVRSIAERAGANQALLFRYFGSKQGLLTEVLAQGGLEQLRTTPPEELFETALRSMLTRSAVGGTEDRSLEVYLRSIGRGDEAAGTLRKLGEEYQGALAGLSGTEDGALRADLAMAWLLGIGLMRTVVAREPLAGADPDDVCRLVLGTLRHLWSASAE
>NZ_CP027306.1|WP_114245838.1|5011208_5012399_-|cytochrome-P450
MTTADITPTAYPFNTPDGLQLADAYERARDRPGLLRVQMEYGEPAWLVTRYADARLVLGDQRFSRAAGASHDEPRQSEGRRDSGILSMDPPDHTRLRSLVAKAFTVRQIEKLRPQVRELTAGLLDDMEAAGPPADLVDLFALPLPVAVICRMLGVPAEDRPRFRVWSDDALSTSSLTAAEFDASRDELRAYMAELIDQHRKSPQDDLMTALIEARDGGDRLSELELVDLCVGILVAGHETTASQIPNFVLTLLDHPDQLTRLRADPGLVPGAVEELLRFVPLGSGAGQPRYATEDIEVGGTLVRAGSPVLVAMGAANRDALRFTAPGVLDIAREGNQHLGFGHGVHHCLGAPLARLELQEALIALITRFPGLRLAGDVTWKSEMLVRGPRVMPVGW
>NZ_CP027306.1|WP_114245837.1|5010984_5011203_-|ferredoxin
MTWNVRVDPELCQASGMCAGVAPEVFALDGEHARARTDGTEPDERVLDAADICPAQAITVHDGKSVIGPRRE
>NZ_CP027306.1|WP_157987146.1|5010450_5010915_+|hypothetical-protein
MRIRSILSLAASAVAVLALATPSQAADDGTYLIRDVRSGACLAGGEGPMGGHIEPCSPRTVWEIRNQGDGLAQIVEARGEGRCLALSPIRIFPPAVWVDECGRQPDQWTIQGEASQGPVAIALGRGELGRLTTQGHRAILSYDGGPQWILERLG
>NZ_CP027306.1|WP_114245835.1|5009149_5010043_-|hypothetical-protein
MAVSQLSAAPCAPHVPLPAPPHPMANPGYGKHSAPAQRPRTDRDFVHLPPREASIAAYIDRLPDGADISVKTLAKVLPYGQCALRTALNRLQDAGHLRRGSECVANDEVLLWVTRTFFSRTARDDDWWAAFTRGDVPPERRHQHPTRSRAFLLLAALGRTAPSLTLSAADCAALEPQVTDWFERGATEAELLHALTDGLPTPVHHAATLARRRLTDKMPPERVTPAQQRTVLRALECSECRAPGSAEALIGGRCGPCRGNPVDAPAGPAKTVPAMGVLSRMNEVRAALTPRAERKYR
>NZ_CP027306.1|WP_157987145.1|5008865_5009090_-|hypothetical-protein
MPPSTADHPDNMSVEELDRRAPETVRLEFLDGHLLVKHGPIHIDDFEELARVAPEIPDPVGFTLGTDRLKDFAR
>NZ_CP027306.1|WP_114245833.1|5007499_5008741_-|hypothetical-protein
MSEPTYEQIVSELHSKRPITLAPGPRLDAEKHGALPLPPSTVWDLPGGTAWVYYGEGHSRLTRPVIFADGFNTGPSSLDFSWEIMEFGDYALISELRRRGHDVIILGFHERSASILDNSRTAQAAILHAIAERQGHTPLAVGGFSMGGLVTRHALAKMESQGIDHQASLYFSYDSPHRGAWIPIALQAFAHYIKDLDSRFSDQINSPAARQLLWRHIEKWDGTPDQSDERTTFLSEMEAIGQWPRRPRLIGVANGVADGTGTDAQAGELALEGKGLSVVGTKLYTQSPGDRELVAKLRVVTLKTNEVRTSGLPSVDGAPGGSLEGFGILADGLNALSPILGFKTDVRIRSHCFVPAVSAVDVGDPDTDAELYKDISALPPNTGGLDEFKLASRNEGHTLVTEELCTWLLDRLP
>NZ_CP027306.1|WP_072487928.1|5005710_5007333_+|chaperonin-GroEL
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIEKAVEAVSAALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQTFGLELELTEGMRFDKGYISAYFATDMERMESSLDDPYILIVNSKVSNVKDLLPLLEKVMQSGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVISEEVGLKLENAGLDLLGRARKVVITKDETTIVDGAGDSDQVQGRVNQIRAEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQASAVFEKLELSGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLAVGHGLNAATGEYVDMIAEGILDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAAAPGGMPGGDMDF
>NZ_CP027306.1|WP_114245842.1|5016672_5017515_-|helix-turn-helix-domain-containing-protein
MPGPKELDPSSSPRALLGAELRHRREGKGLSQEELGLPLFVSGSFIGQLESGTRRMQVDQAQKLDEILKADGFFVRNCAALKKSKYPNHFAEAAEAEAVAKTIKQYAPQLIPGLLQPEAYARAVFRAYQPTATEDVINDLLTARLERAELLRDPTTPLVWAVLDEAVLRREVGGPAVMAEALCHIAKLAREHRIIVQVLPDSAGAHAAMSGIVKLMSFADAPTLTYFEVLGSGRLEDDPATVARCELSYDLVAASALSPEASLALLTSMAEDYTHEAQQL
>NZ_CP027306.1|WP_114245843.1|5017626_5017878_+|hypothetical-protein
MMTTMERRRTAEGRVRAAEDAVARLKEGFSGVGITLPSLRVDPVSCAGNEPASPLVDLGRCNLDTALRLSAVLEAQGLAGHDG
>NZ_CP027306.1|WP_114245844.1|5017867_5018101_+|hypothetical-protein
MTDEGLEPCVPEPGSFAVDTRDGRVGRVMGCVGPYVQLRAPGGGAEWDCPPESVRPAPLGEVLRARVREVNREGRLP
>NZ_CP027306.1|WP_114249202.1|5018205_5018667_-|calmodulin-binding-protein
MRHIFTKIGSLAAVAMLAFTVAQPAQAAQHSEGAQRAAVAPAYFEMTDITRSTFIVKLVKEREIQHARDLVSGATNDEPHVVGRLKKYPASYNPGWSYHYDPQTVHFFDYAIEVCDATLPYVEEHLDEAGGPFLPGLIFCPWTSKLVREVPAP
>NZ_CP027306.1|WP_114245845.1|5018784_5019405_-|TetR/AcrR-family-transcriptional-regulator
MTENPTRQPSAGQTRRRGAVLEEAILRAAVDELTESGFAGLTMDKVAARAGTNKNAIYRRWPNRLALGIAAYRQLATTVQPPDTGDLRSDVLELLRGANRHWSSPLGAILRELLSAAGGTSELLAQLQEQSSDAAAAPWLTVLGRAVARGEASPEALHPRVATVAVVLLRNEFVVRGAPTAPDDVLVEIVDEVYLPLVRRRDPAPN
>NZ_CP027306.1|WP_114245846.1|5019523_5020558_+|hypothetical-protein
MRARGISYDTGFVKNGAVSRKLFDPEVVGRELRIIRDDLHCNAVRVMGGDPERVELAAGYAADLGLEVWFSPYPLELTADEMLSLFADCAERAERLRRRGAEVVFVVGAELSLMNKGFLPGDSIDDRVALLSRPDRVREHIGQVSARVNDFLDKAVALVRERFGGRVTYASVPLERVDWAPFDIMSVDLYRSAETADRFAEGVHHLVAQGKPVAITEFGAAGYRGAADRGAHGLEIVEYDKDAGPLRLNGEYVRDEAGQAAYVRELLEAFDAGGIDSTFVFTFALYDHVHRPDGDPREDLDLASYGIVKVFEDRLGTTCPGLPWEPKAAFTAVADHYGEGRLPR
>NZ_CP027306.1|WP_114245847.1|5020604_5021432_+|hypothetical-protein
MTTDLTDTYASGTRSRARQMLNKVPEVTVYFWVIKVLCTTVGETAADLLNDNLGMGLTNTSYLMSALLVVTLVFQFRARRYVPGLYWLSVVLISVVGTLISDNLTDNLGVPLQTTTVVFAVALAVTFFAWYASERTLSIHSIRTTRREAFYWLAILFTFALGTSAGDLTAEKLDLGYWLSAVVFAALIAAVALAHRTLDFNAVWSFWIAYVLTRPLGASLGDYLSQPTADGGLGLGTVGTSVLFLVVILALVVFLTRTRRDVAQGGSAEVSPQEG
>NZ_CP027306.1|WP_114245848.1|5021412_5022780_-|sensor-histidine-kinase
MKRPLTLRGRLALMALATSALWIGVLTTVFNIALDKRLHGQADDVLRTRAEAVAATVDVRPDGRLVVRAPTEDRALDAGVWIFQGGTVVEKPPTAPAGLEAQAARLAGRRETFADTEGPGSWRLYAFPVDAPARQGHTPTQAGTVVSSVSLDPYRSTADTALIGSIALAVFLLATIYLLTRLVVRRALRPVAAMSEQATRWSAAGAPERFGAQCRPAELAAFATSLDALLDRLAAVLRHEQQQAAELSHELRTPLARIAAETEWLTGRPRSAEQQETSLEAIAGAAATMQQICDSLLSEVRTRNAQTPGRSRFSDIARRLAERNAALFPDAPPVTVAAGSSAPEVSIGVSEDVAERILTPLLDNARRYAAHSVTLTCEASAGEVTVYVSDDGPGVPEDFVASLFEPGRRARPEDGHDGAGLGLALARRLARAAGGDIALDTAAPGARFAVTLPAG
>NZ_CP027306.1|WP_114245849.1|5022833_5023511_-|response-regulator-transcription-factor
MTAARILVVEDDHGLRDVLARGLRDEEFDVVTAVDGATALKTVDESVHAVVLDVGLPDSDGRDVCQAMRGAGFTAPVIFLTARGNLTDRLSGFASGGDDYLVKPFHLSELAARVRAVLNRAGHRGSTTLADSAGAMRLNPIKHELTVHGRPVALTPTEFRLLACLMAGPGSVVRRRALLRTGWPEGAQVSDNTLDQYLARLRRKLREADSPQTISTVRGIGYRFG
>NZ_CP027306.1|WP_157987147.1|5023591_5023816_+|hypothetical-protein
MAGAEQHAGPGALADRGLDHARRALAETAPTQLGPAARSVLRHVLGDGTEPGAWERLQRVNERLSGARPPRRHA

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Crispr_ID: NZ_CP027306_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_8

5047624-5047783

Orphan

Consensus_repeat	Method
GTGGTGCGCACGGCCGCCGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_8

>merge|NZ_CP027306|8|5047624-5047783|CRISPRCasFinder
GTGGTGCGCACGGCCGCCGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGCGCGGAAGCGGGTGGGGTAGGCGGGGGCGCGCGCCGTCCGGCGGCAAGATCAAGCCCGTCCGTGGTGCGCACGGCCGCGGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGC

>NZ_CP027306|8|8|5047624-5047783|CRISPRCasFinder
GTGGTGCGCACGGCCGCCGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGC	GCGGAAGCGGGTGGGGTAGGCGGGGGCGCGCGCCGTCCGGCGGCAAGATCAAGCCCGTCC
GTGGTGCGCACGGCCGCGGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_114245855.1\|5029042_5030308_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP027306.1\|WP_114245854.1\|5028756_5029032_+\|DUF4031-domain-containing-protein	unknown	unknown	gnl\|CDD\|379076
NZ_CP027306.1\|WP_114245865.1\|5051476_5052100_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223620
NZ_CP027306.1\|WP_157987148.1\|5031291_5032098_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114245864.1\|5050357_5051368_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP027306.1\|WP_114245861.1\|5042183_5043827_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_CP027306.1\|WP_114245869.1\|5053877_5054069_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP027306.1\|WP_114245868.1\|5053657_5053846_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP027306.1\|WP_114245863.1\|5049281_5050361_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|227119
NZ_CP027306.1\|WP_114245862.1\|5048430_5049285_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP027306.1\|WP_114245867.1\|5052794_5053646_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP027306.1\|WP_114245870.1\|5054061_5054307_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP027306.1\|WP_114245860.1\|5039219_5041292_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226482
NZ_CP027306.1\|WP_114245866.1\|5052120_5052582_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP027306.1\|WP_114245871.1\|5054331_5055219_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP027306.1\|WP_114245858.1\|5035890_5038230_-\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP027306.1\|WP_114245859.1\|5038428_5039118_+\|copper-homeostasis-protein-CutC	unknown	unknown	gnl\|CDD\|225684
NZ_CP027306.1\|WP_114245856.1\|5030397_5031081_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226789
NZ_CP027306.1\|WP_114249204.1\|5041655_5041871_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114249205.1\|5044050_5046516_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|379300

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_114245855.1\|5029042_5030308_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	7.07851e-84
NZ_CP027306.1\|WP_114245854.1\|5028756_5029032_+\|DUF4031-domain-containing-protein	gnl\|CDD\|379076	pfam13223, DUF4031, Protein of unknown function (DUF4031). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 91 and 130 amino acids in length. There is a conserved HYD sequence motif.	6.78437e-34
NZ_CP027306.1\|WP_114245865.1\|5051476_5052100_+\|HAD-family-hydrolase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	4.56944e-23
NZ_CP027306.1\|WP_114245864.1\|5050357_5051368_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	6.02705e-84
NZ_CP027306.1\|WP_114245861.1\|5042183_5043827_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	3.34423e-110
NZ_CP027306.1\|WP_114245869.1\|5053877_5054069_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	1.66972e-12
NZ_CP027306.1\|WP_114245868.1\|5053657_5053846_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	3.35354e-12
NZ_CP027306.1\|WP_114245863.1\|5049281_5050361_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|227119	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism].	1.15337e-77
NZ_CP027306.1\|WP_114245862.1\|5048430_5049285_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	6.35772e-125
NZ_CP027306.1\|WP_114245867.1\|5052794_5053646_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.23237e-09
NZ_CP027306.1\|WP_114245870.1\|5054061_5054307_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	0.00553776
NZ_CP027306.1\|WP_114245860.1\|5039219_5041292_-\|AAA-family-ATPase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	6.31617e-69
NZ_CP027306.1\|WP_114245866.1\|5052120_5052582_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	5.5351e-14
NZ_CP027306.1\|WP_114245871.1\|5054331_5055219_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.82704e-26
NZ_CP027306.1\|WP_114245858.1\|5035890_5038230_-\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP027306.1\|WP_114245859.1\|5038428_5039118_+\|copper-homeostasis-protein-CutC	gnl\|CDD\|225684	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism].	6.61628e-25
NZ_CP027306.1\|WP_114245856.1\|5030397_5031081_-\|hypothetical-protein	gnl\|CDD\|226789	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown].	1.0128e-47
NZ_CP027306.1\|WP_114249205.1\|5044050_5046516_-\|DNA-binding-protein	gnl\|CDD\|379300	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain. This domain family is found in a wide variety of helicases and helicase-related proteins.	3.97571e-43

>NZ_CP027306.1|WP_114249205.1|5044050_5046516_-|DNA-binding-protein
MGMTTPPRTLAEALRARDDESLAGLLRARPDLLTPVPGDITQLATRAGTRASVVRALEHLDRFALQTAEALAVAPDPAPYETLLGLLTGDGRDDGEYRGDADAAIGDALPAALTTLREQALVWGEDDRLRLVRTARELLAPSPQHPSPTGLGPTVAEATAGMSPGRLQDILATAGLPATHDPVSAVTSLSALFTDRARMGELLDTAPAEALSVLDRLVWGPPYGEVTPNPTPPVKWLRDRGLLLPVSTRTVVLPREAALHLRAGRAHRVPEPQPPAVEAVANRDPQAVDSAAAGQAFLAVTTVEELLKSWNGGGPAILRAGGLSVRELKKTATTLDVSEPVAAFWVELAYAAGLLASDGEADERYAPTPAYDDWAELPAQDRWVRLATAWLAATRTPGLVGGQDAKGRALSALGPDLDRSAAPEVRHRVLALLASLAPGTAPAPETVLARLRWERPLRGASASAGDTTDLRSRIALWTLNESELLGITGRGALAAHTRALLDSEPAEAAALLAPLIPEPLDHVLLQADLTAVAPGPLERPLADMLSALADIESKGGATVYRFTPGSVRRALDAGQSAADLHAFLAAHSRTPVPQPLSYLIDDVARRHGHLRIGAASSYVRCDDEAVLNELLADRRSATLRLRRLAPTALAAQVDPASLLEGLREMGYAPAAESAEGDVLITRAGARRTPPRTAPVPVPEGPPVPDATLLGAAVRAIRAGDTAATVARKDNGTTDAPAASSGSLPRTTSAETLATVQAAAMTGSALWIGYVNADGAASQRVIAPVRVEGGFVTAYDHTADEVRTYPLHRITGVAELADDATP
>NZ_CP027306.1|WP_114245861.1|5042183_5043827_-|DEAD/DEAH-box-helicase
MTGPLIVQSDKTLLLEVDHDQADACRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAGHDAEQVVDALVQYSRYPVPHALLVDIAETMARYGRLTLSKHPVHGLVLTSTDRPVLEEILRSKKVQPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWALRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHELVKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTRRKGIYPHLELFDSRDWGLVIYDEVHLLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPADCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEALVRKHRGEQTLVIGQYIDQLDELGEHLNAPVIKGETSNAQREKLFDAFREGELSVLVVSKVANFSIDLPEATVAIQVSGTFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDADELLTDN
>NZ_CP027306.1|WP_114249204.1|5041655_5041871_+|hypothetical-protein
MSTVSLNPRRTGPAHGATAATGHPYTHHVGDALRAVKVYARAAFGVLVLGEYAEEAGVHRGVHRGVHRREH
>NZ_CP027306.1|WP_114245860.1|5039219_5041292_-|AAA-family-ATPase
MPAHEHESDTTTDPLARERAHLAASRSALRAMREDAQALDIRDVTANWVNAAVLQAQIDERIKSLADLAHTPLFFGRLDYLHRVGAEQAEGAEGEQFYIGRRHVHDADGDPMVIDWRAPVSQPFYRASKKDPQDVGQRRRFGYTGGELTAYEDEHLSDPTEAAQTSKLLQAEIERPRVGPMRDIVATIQPEQDEIVRSGLGGTVCVQGGPGTGKTAVGLHRVAYLLYAHRERLARTGTLVIGPNRSFLHYIEQVLPALGELEVKQATVDDLVTAGIEVRGTDSAAAAVVKGDARMAEVLRRAIRSHVTLPTEPVMVVRGSRRWRVPAYELEEIVTELLARDMRYGAAHEALPQRIAHSVLVRMEEAGEAPDDRVQNAVARNPAVKAAVKAIWPAVEPAKLVLRLLVDAEFLAAHAQGLLTEDEQKTILWTRPVRSVKSAKWSAADAVLIDEANDLVARTHSLGHVVLDEAQDLSPMQYRAVGRRCSTGSATVLGDLAQGTTPWSTESWAQALHHLGKSDAVVEELTAGFRVPREVIAYASRLLPVISPGLAAVESVRESPGSLEVRGVGDPAELNAAVLAACEESLRQEGSIGLIAADARIPALADALAAAGHAYLSPGEETNAESRLTLVPASLAKGLEYDYVVLDEPAAVVDGEPDERTGLRRLYVALTRAVSGLTVVHAAELPAQLL
>NZ_CP027306.1|WP_114245859.1|5038428_5039118_+|copper-homeostasis-protein-CutC
MSNRAVLEVIALDAGDAVAAQAGGADRLELVTDMAADGLTPSCATFAEIRAAVDIPLRVMLRLADGFAAGDIDVLVARAHELRAQGAEEFVLGFLDAEGHPDLVAVERLVAELDGCRWTFHRAIDRAADRDALRKQLADMPGLDTYLTAGSPKGVDDGIATLLAEAARKGEPGYEPQILVGGGLRLEHLPQLLSAGIDAVHIGGAARPHGWSGPVDAAAVREWRAVLDA
>NZ_CP027306.1|WP_114245858.1|5035890_5038230_-|copper-translocating-P-type-ATPase
MNQQCIPPRGIDVSAREDIVSAHTATTGTGTAVGTTAEVELAIGGMTCASCAARIEKKLNRMDGVEATVNYATEKAKVSYRGEDISVQDLIATVEKTGYTAHEPAPPVRTEDDAPGAADADELRPLRQRLLTAVVLAVPVIAMSMVPALQFDYWQWLSLTLTAPVVTYAAWPFHRAAWTNAKHGAATMDTLISVGTSAAFLWSVWALFFGTAGMVGMTHPFELTIGRSDGAGNIYLEAAAGVTAFILAGRYFEARSKRKAGAALKALLELGAKEVTVLRGGHEVTVPTADLQVGDRFLVRPGEKIATDGTVVEGASAVDASMLTGESVPVEVGVGDSVTGATLNAGGRLVVEATRIGADTQLARMAKLVEDAQNGKAAAQRLADRISAVFVPVVIALALGTLGFWLGNGAGLTAAFTAAVAVLIIACPCALGLATPTALMVGTGRGAQLGILIKGPEVLETTRRVDTIVLDKTGTVTTGRMTLLDVHTADGTDESDVLRLAGALEHSSEHPIAQAVAAGAAERTGAALPTPEDFANVAGLGVQGVVEGHAVLVGREQLLAEWEIHLPVELARQKAAAEAAGRTAIAVAWDGEARAVLEVADAVKDTSAEAVERLRTLGLTPILLTGDNRAVAEAVAAEVGIEKVYAEVMPEDKVNVVKDLQAQGRSVAMVGDGVNDAAALAQADLGLAMGTGTDAAIEAGDLTLVRGDLRAAADAIRLSRKTLGTIRTNLFWAFAYNVAALPLAAAGLLNPMIAGAAMAFSSVFVVGNSLRLRGFRAAA
>NZ_CP027306.1|WP_157987148.1|5031291_5032098_-|hypothetical-protein
MRLQKLIKRVCKSDRQAALSALSALEERISPQGAAFTEEAVTAIPMLFDAATRSETTIRSEILNYLGSAYEYTLGTWRFRWDEDPDTRHHFTEMVSWEQMISESYWKCAPSVVPLLGADHDEAVRGSAVHLLSRIKESGPELVPTLQHMYDEQVGEPLRIDIIEGVANLTFTQRPARASDLQWLHEKLNDSSPAIRLGTALSLMAREGQEKEAGHEDDGRSPLKQIALDARAEGERALRQTAWLANKSTDWALERTVDQNAQSGGTDV
>NZ_CP027306.1|WP_114245856.1|5030397_5031081_-|hypothetical-protein
MSDSSRAGGAHGVDSADDSLRERWRNALVGARGGASGPDPMPYADNLLARWAEPQRRYHTTAHLVAVLDRIDTLAGYAADADAVRLAAWFHDAVYRPDRSENEERSAALAERALPEAGVPADVTAEVARLVRLTVTHDPADGDTNGEVLCDADLAILAADPKEYAAYAAQVREEYGFVPDDAFREGRAAVLRQLLGLPRLFRTPHGVARWEPGARQNLLTELELLSH
>NZ_CP027306.1|WP_114245855.1|5029042_5030308_-|MFS-transporter
MPDSAARRSRMPLAVYILGLSVFALGTSEFMLSGLLPPIADDMNVSIPRAGLLISAFAIGMVIGAPLLAVATLRLPRRTTLIALISVFGLGQVAGALAPTYEVLFASRVVSAFACAGFWAVGAAVAIAMVPVNARARAMAVMIGGLSIANVLGVPLGAFLGENLGWRAAFWAVGAASAVALVGVTTLIPRIPLPEQKPRLKQEMSIYRDRQVWLSIVITALAAGGVFCAFSYLAPLLTDVAGLDSGWVPTVLALFGIGALVGTTIGGRVADAHLFGVLMSGIAASTVFLVALALFASNQVAAVGLSFLLGLSAFYTAPALNARMFNVAGAAPTLAGATTTAAFNLGNTGGPWLGGTVIDADFGFAATAWAGAAMTVLALVAVVFSLRLQGRGRSRRVTGSPAAASSEVSGKASSQAGTPAV
>NZ_CP027306.1|WP_114245854.1|5028756_5029032_+|DUF4031-domain-containing-protein
MTVYIDPPDWPGHGRFWSHLVSDVSFEELHTFAASIGCPPRAFERDHYDVPESRYEDAVRAGAKEIGSKELVRRITEAGLRRPKGRPAPAV
>NZ_CP027306.1|WP_114245862.1|5048430_5049285_-|ABC-transporter-ATP-binding-protein
MSSTRTSDATATATSRLTVRELTLAYEDRTVVHELDLAVPDGRVTVIVGPNACGKSTTLRALGRLLKPRGGAVLLDGTELSKIPTRKIAQSIGLLPQTPVAPEAITVSDLVARGRQPHQHWWQQWSQEDERAVTDAMERTDVTALGDRSVDELSGGQRQRVWIAMALAQETDLLLLDEPTTYLDIAHQVEVLDLVRRLTAPAADGTRGRTVVTVLHDLNQAARYADHLVAMKAGRIVAEGHPNDIVTAGLVREVFGLDAVIVPCPVTGSPLVVPGAPWQATPEL
>NZ_CP027306.1|WP_114245863.1|5049281_5050361_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MSDTTVRVRPAGYHVVRIGARGRFLLHRRATVVAAALVASLAAVCVAYLCVGESFVSPGEVVKVILGQPSPDELVVGTLRLPRMVVGLLVGAAFGIAGALIQTVARNPLASPDIIGISQGASALTVGAMTFGVTSYTVLPYLSVIGGVAAAALVYVFAWRGGLHATRFVLIGIGFAIALRSVTTLFLTKGDYLVAQQAQIWMTGSLNGRGWSEAAPIGWTLLILLPAVLWAARAQRTVSMDDDTATALGVRLGRVRLGLVALGVVLASVATGTAGPVDFVALLAPQIARRMTRTAQIPLFCSALLGALIVVFADLLARRLFSPTELPVGVLTAAVGAPYLIWLIIRGHGGGRGRSGGTA
>NZ_CP027306.1|WP_114245864.1|5050357_5051368_-|iron-ABC-transporter-permease
MSAAAPRRSRRALATAAAVVALLVAILLSLAVGARSIPPSEVIDALLHGGHSDAAEVIRNMRVPRTLIGLMVGAALALAGTVLQGITRNPIADPGILGISQGASVGVVLAIAYAGIHTLTGYVWFAFAGAAIASVAVYAIASSGRGGATPVKLALGGAAINALLVSVTMAVLTTKASALDEFRFWQVGSIAGREADVAQQIWPFMLVGTVLVLSVARGLDALALGEDVAKGLGQKVATVRIVGGIGATVLTGVGVAAAGPIAFIGLAVPHIARAIVDSDHRWVLPMAALIGPVMLLVSDVIGRILFPPSEVPVGVMTALIGVPFLVTLVRRKAVPA
>NZ_CP027306.1|WP_114245865.1|5051476_5052100_+|HAD-family-hydrolase
MDAMPSHPLTVGFDLDMTLIDSRPGIKAAYLALSAETGTPIDADLVASRLGPPVDDELRNWFPADAVAATADRYREIYPTYAIAPSPALPGARESVAAIRERGGRAIVVTAKHLPNAELHLAHLGIEPDAVIGGLWAEAKGEALREHGADVYVGDHTGDVRGARTAGALSVAVTTGPCDAEELRAAGADVVLSSLTDFPSWLDGYAA
>NZ_CP027306.1|WP_114245866.1|5052120_5052582_-|ATP-binding-protein
MVSATVSPPWTYTLQLPQDPRAPGVARATLRTILRVHGMRELTETAELLASELVTNAYLHSSGAYSLRLRDAGRSRIRLSVWDTNPHIPAPFQWAAEAPEELAERGRGLYLVTLYAESWGAHPMGTGLPGPGGKLLWVECAAKTDDAPSYGAR
>NZ_CP027306.1|WP_114245867.1|5052794_5053646_+|helix-turn-helix-domain-containing-protein
MASRSTPGVRRLRLGAELRRLRERAGLTATEGARLLGISQAQLSNIEASRFGVSAERLRAMARNYRCSDSAYVAGLLDLAGERSSGWWETFREVLPSPLLDIAELEHHATGLRSANTSHVPGLLQTTDHAREIFRQVVPEFSRSDIEHRVSHRLQRQALLDRPSPPTYGAVIHEAALRVPVGGPVIARNQLRHLLEQGEREHITVQVIPFAIGAYPGSGQTILYVHGSVPRLDTVSLDQSHGPVLVDAEAELEAYRLLLARMAAVALTSDKSRDFIHSLIADQ
>NZ_CP027306.1|WP_114245868.1|5053657_5053846_+|DUF397-domain-containing-protein
MHQHSWQRSSYCGQGESCLYVAARNSTVSLTESSDPTGAILRTTPATWAALVRTLKENRAYG
>NZ_CP027306.1|WP_114245869.1|5053877_5054069_+|DUF397-domain-containing-protein
MPTYGHWQKSSYCAQGDSCMHVAARNSTVELTESSDPTGAILRATPAAWAALVRTLKESHTHG
>NZ_CP027306.1|WP_114245870.1|5054061_5054307_+|DUF397-domain-containing-protein
MADIPTDLTWVRAAPEGEEGPGPWIEIAFGPDELVYLRETSDPENVVTTTTTKWDAFTKGVVAGEFDHFAELDGEGLVTPS
>NZ_CP027306.1|WP_114245871.1|5054331_5055219_-|alpha/beta-hydrolase
MPIVEVSPGVSIAYETFGDPSDAPVLLVMGFSAQMIAWHEDFCRALARRGRYVIRYDNRDCGLSTKFDDHPVDTGRLIAAVSSGDIPSALAMVPYTLRDMADDGLDLLTALGIERAHVVGSSMGGMIAQTMAITRPTRVLTLTSMMSSTGEPEYGRSSPEAQAVVSSPKPADREGYIAAAERDLVWASKRYGDPAALRELAANSYDRAYYPAGVGRQLGAMVLSGSRAHALRKLRVPTLVIHGLDDTLVDPSGGERTADLVPGAKLLLIPGMGHDRPRELWPEINDAIEAHTSRE

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Crispr_ID: NZ_CP027306_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_9

6329389-6329493

Orphan

Consensus_repeat	Method
GGACCGAACGATCCGTTAGGTATGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_9

>merge|NZ_CP027306|9|6329389-6329493|CRISPRCasFinder
GGACCGAACGATCCGTTAGGTATGTGGTTGGGTGCTCCGCCGGGAACGTGGCTCGCAGGGTCGAAGGCGGCCGGTGCAGGACCGAACGATCCGTTCGGTATGTGG

>NZ_CP027306|9|9|6329389-6329493|CRISPRCasFinder
GGACCGAACGATCCGTTAGGTATGTGG	TTGGGTGCTCCGCCGGGAACGTGGCTCGCAGGGTCGAAGGCGGCCGGTGCA
GGACCGAACGATCCGTTCGGTATGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_114246778.1\|6335851_6336229_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP027306.1\|WP_114246770.1\|6326453_6326765_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368288
NZ_CP027306.1\|WP_114246776.1\|6333005_6334388_-\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|273233
NZ_CP027306.1\|WP_114246779.1\|6336320_6337436_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP027306.1\|WP_114245910.1\|6331343_6331655_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246765.1\|6316186_6317503_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379258
NZ_CP027306.1\|WP_114246774.1\|6331676_6332009_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246766.1\|6318058_6319477_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246767.1\|6319559_6323531_-\|type-VII-secretion-protein-EccCa	unknown	unknown	gnl\|CDD\|274858
NZ_CP027306.1\|WP_114246772.1\|6327876_6328275_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114245909.1\|6330877_6331279_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246777.1\|6334572_6335832_-\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NZ_CP027306.1\|WP_114246780.1\|6337834_6338512_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379324
NZ_CP027306.1\|WP_114246781.1\|6338592_6339363_+\|enhanced-serine-sensitivity-protein-SseB	unknown	unknown	gnl\|CDD\|379654
NZ_CP027306.1\|WP_114246771.1\|6327047_6327842_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246769.1\|6324977_6326351_-\|type-VII-secretion-integral-membrane-protein-EccD	unknown	unknown	gnl\|CDD\|274855
NZ_CP027306.1\|WP_114246775.1\|6332294_6332528_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246764.1\|6314514_6316008_-\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341259
NZ_CP027306.1\|WP_114246763.1\|6312795_6314283_-\|carboxylesterase-family-protein	unknown	unknown	gnl\|CDD\|365897
NZ_CP027306.1\|WP_114246768.1\|6323592_6324924_-\|MinD/ParA-family-protein	unknown	unknown	gnl\|CDD\|223531

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_114246778.1\|6335851_6336229_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	1.35298e-59
NZ_CP027306.1\|WP_114246770.1\|6326453_6326765_-\|hypothetical-protein	gnl\|CDD\|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	0.00325524
NZ_CP027306.1\|WP_114246776.1\|6333005_6334388_-\|L-serine-ammonia-lyase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP027306.1\|WP_114246779.1\|6336320_6337436_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP027306.1\|WP_114246781.1\|6338592_6339363_+\|enhanced-serine-sensitivity-protein-SseB	gnl\|CDD\|379654	pfam14581, SseB_C, SseB protein C-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This presumed domain is found at the C-terminus of SseB proteins.	4.29524e-32
NZ_CP027306.1\|WP_114246765.1\|6316186_6317503_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379258	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain. This helix-turn-helix domain is often found at the C-terminus of PucR-like transcriptional regulators such as Bacillus subtilis pucR and is likely to be DNA-binding.	8.1144e-18
NZ_CP027306.1\|WP_114246767.1\|6319559_6323531_-\|type-VII-secretion-protein-EccCa	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP027306.1\|WP_114246777.1\|6334572_6335832_-\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP027306.1\|WP_114246780.1\|6337834_6338512_+\|AAA-family-ATPase	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	3.57337e-07
NZ_CP027306.1\|WP_114246769.1\|6324977_6326351_-\|type-VII-secretion-integral-membrane-protein-EccD	gnl\|CDD\|274855	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD. Members of this family are EccD, a component of actinobacterial type VII secretion systems (T7SS) with ten to eleven predicted transmembrane helix regions. [Protein fate, Protein and peptide secretion and trafficking].	7.03169e-19
NZ_CP027306.1\|WP_114246764.1\|6314514_6316008_-\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341259	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD. This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.	0
NZ_CP027306.1\|WP_114246763.1\|6312795_6314283_-\|carboxylesterase-family-protein	gnl\|CDD\|365897	pfam00135, COesterase, Carboxylesterase family.	4.05563e-118
NZ_CP027306.1\|WP_114246768.1\|6323592_6324924_-\|MinD/ParA-family-protein	gnl\|CDD\|223531	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility].	4.54473e-25

>NZ_CP027306.1|WP_114246772.1|6327876_6328275_-|hypothetical-protein
MTSENRPNPRFEEDMQLKRVAGPPRYNRVAQGPVQYVRVADSGGVLIGYVWANDEGDAAGWVTPPGLGAAAINAGAAWLRKLRDAKSRGIAPTALLAELVRDTSDIPGSGVVPGSLAEAPSLAELKELASGG
>NZ_CP027306.1|WP_114246771.1|6327047_6327842_-|hypothetical-protein
MTYEPDAPRYRSETDKPVHHLTVANARGEAMGYLWANDEDDAAGWCLRPAGDRAGFDQGLKWSAKLDEAKARGLVPTAALAALVRGSDPRCVSHIDPGSLTAAPSLTALTQLAHIVTAADDRRLLAQLDRENADAWRQLREGLAALTDEDRDVQWSKGGEQPDGTRQMSYPLHSRRLERVVRALPAVGAVTPAYLWQDNPPPTVPLDGRMSPADAVRAATAVVRGERFSDGTIARAAKDGLIDAVAESLCSWYATEVAGTHDDP
>NZ_CP027306.1|WP_114246770.1|6326453_6326765_-|hypothetical-protein
MARDYDSQLLESVAVRRRRMRDALLFGAQRARRTADERLGKVFAGIAIAAVLCAGCVGWSFIQNMLEKQKAEQQKQQRQEQQYQQPMKSAQPEKSGESAKNPQ
>NZ_CP027306.1|WP_114246769.1|6324977_6326351_-|type-VII-secretion-integral-membrane-protein-EccD
MIGSRKVVSTATTSRAQLSRVTLVGERRRADIVLPSDTPIGQLLPDILQLLDDRAAARPMTRQLITSDGSALPHDSTLSSAGIVDGAVLRLVRAHSAPPAPVVHDVTDLVADDLDLQVWRWRPAARRTSAGVASVAFAVIAALLARREFALEALTGALVAVTLVLLAAGALIARIGQGNRGLATALLLASGSLGIAGAWTAADAYDWSGTSRLAGVAGALVLMLVLLGYFSPLGRGGLIGAVATTAIVVVWEAVAAVQDDLARLGAVMAVFSVVLLGLLPRLALAASGLTALDDRRSGGVSVSRHQVGNALAATHRGLALATVVTAVSAAAGGWLLTLADKPSMWTVALPSLVALVLLSRARAFPLVAEVVALFAAAAILVVRLVVLWMQHAGGAGPLALLCVAAVLPLLVLAVQPPEHVQVRLRRMADLVESIGVVGLFPLAVGVFGVYGQLLNKF
>NZ_CP027306.1|WP_114246768.1|6323592_6324924_-|MinD/ParA-family-protein
MPNEDNWQGDVLRAMRGGAAQDSAQGPGGQGYGAPAQGQGGQPYTAPASNPGLPAQSAPAQSAPAQSAPAQSAPAYGTPQQQAGYREPQQAAQYAAYQEQHQPQHPGHQEQQPMAAHPVGQPQQAQATYTPGTRPHHTPDSRPVVDRGLAAVGRKARRGEPFAARAARALRVSVSSSAAREVARTTATAEMLQQPVTTGRQIAVTSIRGGAGKSTVAALLGTTYAHYRQDPVLFVEADPALGSLPLRLGAETLRWTTGDLAGIIEPQMSLLDITGYLVQLPGNAWLLPGSQGQIGAMLDSRAYERVMVSLRRYFGVTVVDCETLPAEVARVALSAAQARVLAAPATLEGITSTYAVLQWMQSLPRHVIAGTVVVLSELVPHPGLDLDEAAEKLKSTGAGVQVLPYDRHLAAGGAIRTELLAHATREAATRLAADVFRLSQQHH
>NZ_CP027306.1|WP_114246767.1|6319559_6323531_-|type-VII-secretion-protein-EccCa
MSTRLIHRPARTTRPPAASEARTIEAPPNLPEGKSGNIAMSLLPVAGVMSSVVMMTVVRNSQFAGLGAIILVVTVIGSVALVFSQRGKAQRTRRTQREAYLAYLEDLREELSDEERKRAERADILNPPPHALYDIVRDPARVWERRRPDGDFLRVRVGTGEMPVRDLKVAQQGSSVLSPPDLFMLNEASALMDRFRTGTELPLTVPLDRVGNISVIGPREDCLRVARALLVQTAATHAPDDVAMALAVPGDRLAEWEWAKWMPHLLDPEQFDGPVAARRIAPSAPQLARQIGPELRRRASYAAEVRRGLSGKDALSMTSRLLVVTDGHGEDAVDLPRPDDAVGLREMSVSVLHLLEHRVQEPGHVSVRINVDGDRVVIEDLREQEPISAHGTVDEVSIPFAEGLARMLAPMRLSAESLVDAPLSGPVDFADLLGIDDVAQLDLSHLWAPRGERAFLRVPIGISDSRQPVLLDLKESSELGMGPHGLCVGATGSGKSELLRTLVLALVATHPPEDLALVLVDYKGGATFAPFADLPHVAGVITNLENQAGLVERVHASLAGEVKRRQQVLKDAGNVADIGDYAALRADRRPDLDPLPHLFVVIDEFGELLTAKPDFIDLFLSIGRIGRSIGVHLLLSSQRIEGGKLKGLDTYLSYRLGLRTFSADESRTVLDTTDAFHLPPLPGFGYLKVDTSHYERFKASYVSGAYQGPVQRTQEEDTGPLALEYEAFNTLAEPESPGEEPKARRRETGPTEMGVIVDQLRSAAGPVRRIWLPPLPDAIALDKIAGPLDVGPRGMQLAKRRGPLQVPLGLLDDPTKQWQGQWYLDLTVAGGHAAIIGGPQSGKTTLLRTLALALSLTHTPQEVGVYGLDLVGGGLQAVSGLPHVGGVAGRADRERAGRTVEEVRGMLAIREELFREHHIDSVEQLRSLHAAGRLPQLASAEIVLVIDGFGALRDDFDELDDAVVDILKRGGGYGIHVVAGMLRWNDVRIATQSNFGTRVELRLNDPSESSIDRKLAQTLSPDEPGRILTDSKLFAQVALPRTDGLADTSDLGAVLEHTARTVRATWSGEVAQPVRILPHVLEPHLLPGPVAEPQRVPIGLDQTALAPAMLDLFHHDQHLLIMGDSECGKTNLLKTIAKGLIERYGEEELVFAVMDPRRGLRGAIPEEFRGGYAYNPKMCAGLAAGIATELEKRLPDDRADTEDLEPGSWGSGPRIVILVDDYDVLTTAGQAPLDPFLPYIPSAVDIGLHFVLTRRVAGASRGMYDPLVLGLRESGASALLMAGDRSEGQLFPGVYAAQQPAGRGVFIQRGRPNRLIQTVYTAE
>NZ_CP027306.1|WP_114246766.1|6318058_6319477_-|hypothetical-protein
MTKDVIALTQRMPDPLTVLAGLLAGGPDKLVGTTGEDAVVQLCDEQGRPLVSVEAPLLVQVAGEAERLLGATAPPVPFWWTEARATTGVEEAELLAGTFAARLATLAGGSAWPPEAARSLAVVKTEGVSLAPTPAAAQPAVDALTDKVAVVIQDRPVIAMTAWLSDAFRAAAHAELGLQIVTSPGATLSPAVRNSLSGWPSRWVVQDERDGYYDGLSGAVLRWQNGLFAPVEAAHPVPGDPRTPVATSYQEVANTGERQLAVSFRTVHPADDRLVLGGALESVWRELTGEAPAGWGTAEPANLPWSLRRLTDVAFERAPEPTWIVVVGSPDRPGLATVRISRTKAGVEEDVTLAFGYGPDEEPPLDALPRAAEVLATRHHLQSMLVQLRKARRDLAVPPRFEGPGVPLAFVLGAEEVREMPGDRARRTPLSEPPVQLGPRSRPALYYPLPGDPSDLSGWQDFERLMRHLKGA
>NZ_CP027306.1|WP_114246765.1|6316186_6317503_+|helix-turn-helix-domain-containing-protein
MADSPGARPPRSDDHGSGGADGELRRALAVALVPQIDELTRRVVADIHAHSGTYASGAPVSRDDLWEICRDNLLRALEDFGGLPPSGGDFEYAARETGRRRAEQNVPLDTVLQAYRRGGRVMWQMMAEHLRATRAGRAGGTGQGRDTVGVVAGDRDTELDMAGAVWETIDRYSLVMAESYRLTQLEMQGRQDTRRVALFEALLDGRGDDPAVAAAASAALGVPVHDRYVIVVAAQDPAAPPNPAPVLDDHGIWSFWRPRSGRYAGIVRLAAGESGVLLDLLRHRTGATAGVSPEFDRLAQAGRALRLAEQALRTLPAGSGEAAAFDDRLAEVLLVGRPEIAERIVTTQLGAVLDTAAERDALLSTLRVWLDSGCSAARAAELLYCHRNTVLNRIGRIAELTGRSAESGEARLGWALALRALPLRGADGEPAPTEGYVG
>NZ_CP027306.1|WP_114246764.1|6314514_6316008_-|long-chain-fatty-acid--CoA-ligase
MFLSVATVLRESARKYPDRVAVVDSDTRLTYRELWARALRCAGALRASGVRPGDRVAVLLPNSADFLYAYYGALAAGATVVPVHGLLVADEVAYVLRHSGSVALISGGPLWPVAEDGARTAGVRAVRGVPTDGDPLPAPEPAAPDDTAVILYTSGTTGRPKGALLTHLNIVMNASVIAHDLVGLDIDDVVLGCLPLFHSYGQTCAMNATLRAGATLVLMPRFSGAGALELLAAEGVSVFMGVPTMYHALVEAAAKDGTTHRLTLRAAVSGGAALPVAVLERFEETFATQVLEGYGLTETSPVATFNQPELGRRPGTVGHPVWGVEIGVADAAVEDAVLLLPDGEVGEVVVRGHNIFAGYLDDPEATAAALVDGWFRTGDLGVRDEDGFLSIVDRKKDLVIRGGFNIYPREVEEVLVRHPAISEVAVIGVPDEARGEEVCAVVVLRADAGAVTEEDVIAWSRDRLGRHKYPRIVRFTETLPLGPTGKVLKRALTAASS
>NZ_CP027306.1|WP_114246763.1|6312795_6314283_-|carboxylesterase-family-protein
MTAVPPPMSETSPQVSTVHGAVRGTLEQGVAVFRGIPYAAAPVGTRRFRAPEPPEPWEGVREAVAFGPTAPKRPYSPPLDRLLPDPDVPGDNCLNLNVWTPSPARTGLPVLVWIHGGSLLHGSSAVPVYDGAAFARDGVVLVSVNYRLGIEGFGVFPDAPANRGLLDQLAALAWVRDNISAFGGDPDLVTVCGESAGAISIAALLAAPRAKGLFRRAVLQSGAPTALRLDAAARRTTELIAKRLRVAATAGALAAVDPAQLLAAQTEVTSGGSPLTGGNSFQIVVDGDLLPRDPLEALLDGAANDVDLLMGTNSEEYRLWFVPSGLTERLSGIKLRLALLKFKVPGATARTYRSNRPGATPGELLGALATDLLLRVPLNRVADARAGASGSTHLYEFGWPSPVLRLGACHALEIAFVFDTLDRPDAVALAGEDAPQELADAMHAAWVRFAASGDPGWPAWDTSRPVMGFGPGAPAVVSAPRDEELRGWAPYRRNT
>NZ_CP027306.1|WP_114245909.1|6330877_6331279_-|hypothetical-protein
MTGWDLKPQGISGVLKTTGEVAGKIQTHATSYGDHLTSAASSAGTISAEGGGGGGKDGEKAAGGLVALALSQFAEHTTSDLKFIAARAGKSLQGAVDATTAYLNGDLEMAAEAQRKALGAVDLDPKKPGVQDK
>NZ_CP027306.1|WP_114245910.1|6331343_6331655_-|hypothetical-protein
MAGQSDRRSYDTGASADAQGNIQVVIAQLEEVIAARDAQVKAAMADFAADGVADEYHGKELRWNRSSQEVKNIIQLLKTTLEKNDGTAQHTITRAKAAVDNIG
>NZ_CP027306.1|WP_114246774.1|6331676_6332009_-|hypothetical-protein
MKFDMGAQVLSTLSSKSRGSSTDLGTLIRQLVQAAQPLEGKFNGAGRAAFDSFKGRSDEITAALNGSLSALLGGQSGMEAAFSSGDQEQGDNARQQMSAANFDAARFGGR
>NZ_CP027306.1|WP_114246775.1|6332294_6332528_-|hypothetical-protein
MSESPSIWEVRLGIHATRQQAEEIEERIVGLLCPDPDHAPPCPIPWSVSLLHGSGLEEDAPYPELVEQAEAEKHLRP
>NZ_CP027306.1|WP_114246776.1|6333005_6334388_-|L-serine-ammonia-lyase
MAISVFDLFSIGIGPSSSHTVGPMRAARMFARRLKNEGLIAHTVSIRAELYGSLGATGHGHGTPKAVLLGLEGESPRTVDVESADDRVEQIRTTGRINLLGMHEIDFDADEQLVLHRRKALPYHANGMTIFAFDHEGALLLEKTYYSVGGGFVVDEDAVGEDRIVLDDTVLKHPFRTGDELLRLSKDTGLSISSLMLENEKAWRTEDEIRSGLLDIWRVMQACVARGMSREGILPGGLKVRRRAANTARQLRAEGDPQTLAMEWITLYAMAVNEENAAGGRVVTAPTNGAAGIIPAVLHYYMNFAAGGATEAEKEDSVVRFLLAAGAIGMLFKENASISGAEVGCQGEVGSACSMAAGALAEVLGGTPEQVENAAEIGMEHNLGLTCDPVGGLVQIPCIERNGMAAVKAVTAAKMALRGDGSHKVSLDKVIKTMKETGADMSVKYKETARGGLAVNIIEC
>NZ_CP027306.1|WP_114246777.1|6334572_6335832_-|serine-hydroxymethyltransferase
MSLLNSSLHELDPDVAAAVDAELHRQQSTLEMIASENFAPVAVMEAQGSVLTNKYAEGYPGRRYYGGCEHVDVVEQIAIDRIKALFGAEAANVQPHSGAQANAAAMFALLKPGDTIMGLNLAHGGHLTHGMKINFSGKLYNVVPYHVDETGVVDMAEVERLAKESKPKLIVAGWSAYPRQLDFAAFRRIADEVGAYLMVDMAHFAGLVAAGLHPNPVPHAHVVTTTTHKTLGGPRGGVILSTQELAKKINSAVFPGQQGGPLEHVIAAKAVSFKVAATEEFKERQQRTLDGARILAERLVQPDVTEVGVSVLSGGTDVHLVLVDLRNSELDGQQAEDRLHELGITVNRNAIPNDPRPPMVTSGLRIGTPALATRGFQTEDFTEVAEIIASALKPSFDADALKARVVALAEKFPLYPGLK
>NZ_CP027306.1|WP_114246778.1|6335851_6336229_-|glycine-cleavage-system-protein-GcvH
MSNPQQLRYSKEHEWLSAVEDGVATVGITEFAANALGDVVYAQLPEVGDTVTAGETCGELESTKSVSDLYSPVTGEVTAANQDVVDDPSLVNSAPFEGGWLFKVRMAEEPKDLLSADEYTEFSGN
>NZ_CP027306.1|WP_114246779.1|6336320_6337436_-|glycine-cleavage-system-aminomethyltransferase-GcvT
MSTAPRLTALDALHRSLGATMTDFAGWDMPLRYASERDEHNAVRTRAGLFDLSHMGEITVTGPAAAAFLNFALVGNIGTVAVGRARYTMICAEDGGILDDLIVYRLGDTEYMVVANAGNAQIVLDALTARADGFDAEVRDDRDAYALLAVQGPESPAILASVTDADLDGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPEHAEQLWQALTAAGASRGLIPCGLSCRDTLRLEAGMPLYGHELTTELTPFDAGLGRVVKFEKEGDFVGRKALEAAAERAETAPPRKLVGLIAEGRRVPRAGYPVVAEGQVIGEVTSGAPSPTLGKPIAIAYVDASHAAPGTTGVGVDIRGSHEPYEVVALPFYKRQK
>NZ_CP027306.1|WP_114246780.1|6337834_6338512_+|AAA-family-ATPase
MTLQRYATTAGVAHGAMPAQPGAPATETLGTHAPVVRDLRERAGRSPHSLHFAAGDVVVVSGLPGSGKSTLIRRAVTTARAIDSQDTRDRWAGLMPRLLPYALYRPLVRVAHYWGLWRALRSGESVVVHDCGTQAWVRSWLARDARRRGRVLHLVLLDVTPQTAREGQRERGRGVSGYAFARHRRAVGRLLRNTETGLLPPGCVSAVLLDREAAGKLGRILFADA
>NZ_CP027306.1|WP_114246781.1|6338592_6339363_+|enhanced-serine-sensitivity-protein-SseB
MDIPAQVQSHPQSGWPANELEEVLMASVGSPEAGGRLVEVLGRSHIWVPLPNGGGPDSSDLDLPTLEIEGAPYVPVFSSEQQFLSCVGNQMSFTVAPAREFARGLPPQLGIAVNPGGAVGMPLPPPAVAELCRGGRTPLDGPASGGRVRLYEPAWQEEPVDFLSATAGEFEESGVVLTARRALASIEGGEPVLFIGVEFSTWESAGRNAPMDALGRALGRVEVPWPVNLVLLDVAQDPVADWMREKIRPFYQRAGQ

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Crispr_ID: NZ_CP027306_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027306_10

6437787-6437870

Orphan

Consensus_repeat	Method
ACCTCGACGCAGTCGCCGCCCTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027306_10

>merge|NZ_CP027306|10|6437787-6437870|CRISPRCasFinder
ACCTCGACGCAGTCGCCGCCCTGGCTGCTGCTGTAGCTCGACTTGCGCCAGTCGTAGGCGACTTCGACGCAGTCGCCGCCCTGG

>NZ_CP027306|10|10|6437787-6437870|CRISPRCasFinder
ACCTCGACGCAGTCGCCGCCCTGG	CTGCTGCTGTAGCTCGACTTGCGCCAGTCGTAGGCG
ACTTCGACGCAGTCGCCGCCCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027306.1\|WP_157987173.1\|6435886_6437362_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP027306.1\|WP_114246852.1\|6437922_6438747_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP027306.1\|WP_114246857.1\|6442115_6443048_-\|serine-protease	unknown	unknown	gnl\|CDD\|238113
NZ_CP027306.1\|WP_114246845.1\|6432897_6433422_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246858.1\|6443116_6444163_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181818
NZ_CP027306.1\|WP_114246843.1\|6430435_6431776_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377971
NZ_CP027306.1\|WP_114246842.1\|6428599_6429046_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246856.1\|6441030_6442005_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181818
NZ_CP027306.1\|WP_114246847.1\|6434586_6434943_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP027306.1\|WP_114246846.1\|6434093_6434504_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
NZ_CP027306.1\|WP_114246844.1\|6432040_6432670_-\|YceI-family-protein	unknown	unknown	gnl\|CDD\|225228
NZ_CP027306.1\|WP_114246859.1\|6444327_6448200_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372376
NZ_CP027306.1\|WP_114246841.1\|6425670_6428463_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225827
NZ_CP027306.1\|WP_114246848.1\|6435017_6435644_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP027306.1\|WP_114246860.1\|6450978_6452562_+\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|130187
NZ_CP027306.1\|WP_114246854.1\|6439420_6440293_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293813
NZ_CP027306.1\|WP_114249322.1\|6448289_6450632_+\|polysaccharide-lyase-8-family-protein	unknown	unknown	gnl\|CDD\|238517
NZ_CP027306.1\|WP_114246853.1\|6438858_6439302_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP027306.1\|WP_114246855.1\|6440375_6440843_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027306.1\|WP_114246840.1\|6424249_6425617_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184599

Protein	Function_ID	Function_description	E-value
NZ_CP027306.1\|WP_157987173.1\|6435886_6437362_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.27798e-62
NZ_CP027306.1\|WP_114246852.1\|6437922_6438747_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	4.16867e-08
NZ_CP027306.1\|WP_114246856.1\|6441030_6442005_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	2.67721e-73
NZ_CP027306.1\|WP_114246858.1\|6443116_6444163_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	2.59282e-61
NZ_CP027306.1\|WP_114246843.1\|6430435_6431776_+\|hypothetical-protein	gnl\|CDD\|377971	pfam08310, LGFP, LGFP repeat. This 54 amino acid repeat is found in many hypothetical proteins. Several hypothetical proteins from C.glutamicum and C.efficiens along with PS1 protein contain this repeat region. The N-terminus region of PS1 contains an esterase domain which transfers corynomycolic acid. The C-terminus region consists of 4 tandem LGFP repeats. It is hypothesized that the PS1 proteins in Corynebacterium, when associated with the cell wall, may be anchored via the LGFP tandem repeats that may be important for maintaining cell wall integrity [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16]. Deletion of Corynebacterium glutamicum csp1 protein results in a 10-fold increase in the cell volume of the organism and infers the corresponding proteins involvement in the cell shape formation. The secondary structure of each repeat is predicted to comprise two beta-strands and one alpha-helix [Adindla et al. 2004].	1.53485e-21
NZ_CP027306.1\|WP_114246854.1\|6439420_6440293_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293813	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YmaE and Nostoc all1228 proteins.Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. .	2.20132e-68
NZ_CP027306.1\|WP_114246857.1\|6442115_6443048_-\|serine-protease	gnl\|CDD\|238113	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.	8.13245e-48
NZ_CP027306.1\|WP_114246847.1\|6434586_6434943_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	9.79385e-28
NZ_CP027306.1\|WP_114246846.1\|6434093_6434504_-\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.64389e-39
NZ_CP027306.1\|WP_114246844.1\|6432040_6432670_-\|YceI-family-protein	gnl\|CDD\|225228	COG2353, COG2353, Uncharacterized conserved protein [Function unknown].	1.88374e-61
NZ_CP027306.1\|WP_114246859.1\|6444327_6448200_+\|hypothetical-protein	gnl\|CDD\|372376	pfam12905, Glyco_hydro_101, Endo-alpha-N-acetylgalactosaminidase. Virulence of pathogenic organisms such as the Gram-positive Streptococcus pneumoniae is largely determined by the ability to degrade host glycoproteins and to metabolize the resultant carbohydrates. This family is the enzymatic region, EC:3.2.1.97, of the cell surface proteins that specifically cleave Gal-beta-1,3-GalNAc-alpha-Ser/Thr (T-antigen, galacto-N-biose), the core 1 type O-linked glycan common to mucin glycoproteins. This reaction is exemplified by the S. pneumoniae protein Endo-alpha-N-acetylgalactosaminidase, where Asp764 is the catalytic nucleophile-base and Glu796 the catalytic proton donor.	6.46677e-150
NZ_CP027306.1\|WP_114246841.1\|6425670_6428463_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.45087e-52
NZ_CP027306.1\|WP_114246848.1\|6435017_6435644_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.01528e-11
NZ_CP027306.1\|WP_114246860.1\|6450978_6452562_+\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|130187	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. [Energy metabolism, ATP-proton motive force interconversion, Energy metabolism, Fermentation, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP027306.1\|WP_114246853.1\|6438858_6439302_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.50784e-21
NZ_CP027306.1\|WP_114249322.1\|6448289_6450632_+\|polysaccharide-lyase-8-family-protein	gnl\|CDD\|238517	cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family. This family consists of a group of secreted bacterial lyase enzymes capable of acting on glycosaminoglycans, such as hyaluronan and chondroitin, in the extracellular matrix of host tissues, contributing to the invasive capacity of the pathogen. These are broad-specificity glycosaminoglycan lyases which recognize uronyl residues in polysaccharides and cleave their glycosidic bonds via a beta-elimination reaction to form a double bond between C-4 and C-5 of the non-reducing terminal uronyl residues of released products. Substrates include chondroitin, chondroitin 4-sulfate, chondroitin 6-sulfate, and hyaluronic acid. Family members include chondroitin AC lyase, chondroitin abc lyase, xanthan lyase, and hyalurate lyase.	0
NZ_CP027306.1\|WP_114246840.1\|6424249_6425617_+\|hypothetical-protein	gnl\|CDD\|184599	PRK14277, PRK14277, chaperone protein DnaJ; Provisional.	0.0043291

>NZ_CP027306.1|WP_157987173.1|6435886_6437362_+|serine-hydrolase
MSPVAAADAGDWSEMDAFVRSRLEASGTPGAALAVIEDGRVVHQRGFGEDSRGRAVTPDTPFLWGSVSKPITGLAVMQLVEAGRVDLDAPVRTYLPWFRLADPDVSGGIKVRHLLTNTSGIPASASGEIGDRYDNAPSALANAVRDLAQIAPVAEPGESYAYSSAGYAVLGALVEEVSGRPFGTYLHERILGPLGMEHAVVTERDFERERVAPGHRFVFGTPVQFDAPYDTSGVPFSHVGGSVRDLTRFTLAELGGGQLDGRRVLSANGIADTQRGHVDSSVDRFGLGWSVSTLKGTAERMVWKSGALPGHEAMVIMLPDSGRAVILLQNAFDLLRAEEFHEAAFGAARMLSGVDPGTTPDNPLATILPWAMAGLAAVLLLCLAAPALRCLPGWRAAAHARSRRRIVLTAITSVTIPLILAVLLWWLPSTMGGTVAMVLLWIPDVGWGVVAAVVLALLLAVERTALAALDLRRQGSGGSSDAAERQVRLPR
>NZ_CP027306.1|WP_114246848.1|6435017_6435644_-|TetR/AcrR-family-transcriptional-regulator
MPKVVDHQARRVQVADAVQELITEQGLDRVTMARTAATAGVSVGHVQHYFPTKDKMLLFTHERVVQKILDRVSALGERGTRQRLPIRDVVVEGLAEWLPVDPRRRSANRVALAFLGRTVDNPDLARAHAETGRLIRSMLATAVHNGKECGEVPDDTDPALAALELHCLVEGLALQLGSDPGAAASRTAFDLVTARVQTVFPGRCRQYE
>NZ_CP027306.1|WP_114246847.1|6434586_6434943_-|helix-turn-helix-transcriptional-regulator
MLRARDAMDRAYAQPLDVPALARIAHVSPAHFTRTFRATFGETPHHYLQRRRVERAMFLLRETGRSVTDICFEVGFGSPGTFSRTFRDIVGRSPRTCREAVAADVPTCFTMAWTRPNT
>NZ_CP027306.1|WP_114246846.1|6434093_6434504_-|VOC-family-protein
MFNAITHSQIYVLDQDEALDFYVGKLGLEVNADVDMGFMRWLTVSIPGHPERQILLEKPGPPAMSEETAQQVRELVTKGAMGGSLFFTTDDCRKTYETLLGRGVEFTEEPTDRPYGTDCSLRDPFGNSIRFNQPKA
>NZ_CP027306.1|WP_114246845.1|6432897_6433422_+|hypothetical-protein
MVSRMTLRPVLTALALVLGVLFAPGVGVLGSGATQAHAVTKLTHAQATARFSSSGITWSSSGGCSNRNVATCTSFDQLNLATAQGAQTLKSATGCALNITGGTETGHAGGTYSHWNGYKLDFGKSTCLTNYVHNVFTYIGVRGDGAPQYKAGSGNIYADEGNHWDVTYYNCGGC
>NZ_CP027306.1|WP_114246844.1|6432040_6432670_-|YceI-family-protein
MALFNRKNNNAPSATAVATAPAVDPALAALTGEYTIDPAHTSIGFTVRHAMVTNVRGSFGEHEGSLKLDGHNPANSAASIDVKIASIDTGIADRDGHLVSGDFFDAEKFPLMSFRSTHAEQLGGDNYRITGDLTIKDVTRPLAIDLEFNGSATDVYGNERVGFEGSADILRSDWGLTWNAALETGGVMVSDKVKLNFDISAIKAAAAQA
>NZ_CP027306.1|WP_114246843.1|6430435_6431776_+|hypothetical-protein
MMAHIKAMRRCGALAAAAVIVTVALPTAAEADSQYCGRPHWVLGAIQTKYDEMRGPDSPLGCPTSGEQTTPNGRGKFTTFEGGSIYWTSDTGAHPVWGKIREKWGQLGWEGGALGFPKSDEFTNSDGAGKRQEYEGGTVYWHPSRSNGAHPVWGKIGEKWGAADWEKGPYGYPVTDEAPGLRPEDGHSQQFENGPIGWAPGEADNPQWQRAGAKHIDGNANPGDQAQSATLLPKGADRGIVLVRGFIANTTKLYDEIGEHRSFSTAPEAGAKGTIAWDTATGRVGIYIEHSCIQLVHCWDAKPLARTSHAKENTDSNDIEQNEYWVEPYGNGGARIDVSLVNGFSRSGYPELMNAGRINATFWLTPRQYDPDKVINDTATFDVRTTKDKFPSWEVLRYPHLKPTSSAPEVHWLGRVGQTEIGDLKGVQHTCTRVGKNSDDPSMSCG
>NZ_CP027306.1|WP_114246842.1|6428599_6429046_+|hypothetical-protein
MASDITGTKASYRNPSPSHAPTSGTTLLAAVLLILGGAMAICEGIAAITKDRVFVVTRHYVFEFSLTGWGWVHLLLGIALVLAGCAVFSGALWARFFGVAVAGLGAIANFLWLPYYPLWALVLIAVNILAVWALCMGMHREADAGLKA
>NZ_CP027306.1|WP_114246841.1|6425670_6428463_+|SpoIIE-family-protein-phosphatase
MSGIGRFRAALRRSVRRPHRHDGGRSGQATPAPPGRDMSHRSPGRELLSLFSLRTVAGQVFCFVLGLVLLLIAGGGGALVLQGRSDSLQEARLRTMSVAETFAHSPGILPALDSKNPTAILQPRAEQVRRQTHVDYVVVAGPQGIRYTHPDPALIGKHLVGPYKEALAGHGFTKSFSGSQGPSLNSVVPVKRLDGSVAGVVSVGLTDKSVNSVAARSIPFSIAVGVVAFAVTAGGAVLLSRRLSRQTHGLGPVEMTRMYEHHDAVLHAVREAVLIIGADHRLTLVNDEARRLLALPPDAEGRALTDLGLAPETVELLASGRTVTDEVLRVGNRLLAVNLRPAGAGGGPPATVATLRDTTELRKVTGKAEFVHERLLLLYEAGARIGTTLDVSRTAQELADVATPGFADVTSVDLADLALPGDEPTTPDSAPLDMRRTAVAARDPDQPLYSIGRLVGFVPSRIRAMRVNIDEVGLGPEVITQLGWRYWDPERASKILDYGFHSVLSVPLHARGVILGLANFWRAGNADPFDEDDQSFAEELVARAAVNVDNARRYTREHEMAVTLQRSLLPRDLPEQNALDVAHRYLPARAEVGGDWFDVIPLSGARFALVVGDVVGHGLHAAATMGRLRTSIHNFSALDFAPDELLGHLDELVSRIDQDEAAGGGAEIAGAGCLYAIYDAVSGNCSVARAGHPGPVLVLPDGSVEVPEVPVGLPLGIGGMPFEAAEFHVPEGSRLVLYTDGLLESRDRDIDAGLELLRATLAGRDRTPEQTCDDVLDAMLSGPPTDDVAILVVRTRTLDPDQVARWAVDTDPAAVAGVRKNVAQWLSERGLDEEAFTTELILSELVTNAVRYATGPIEVRLLYDRNLICEVSDTSNTSPHLRYAATTDEGGRGLFLVAQFAERWGTRYTETGKVIWSEQTVGESGTEEDA
>NZ_CP027306.1|WP_114246840.1|6424249_6425617_+|hypothetical-protein
MRNRLFPTLLAGLLLILSVAVLAMAPAAPTAVGASTINDVAQALRKGPVYVDPAAADQLSPGQAAALTKKIKDADKPVLVAVLPRTSAFPEQNLLTTLRTDTGITGVYAVRLGNGFNAGADPTVMSTRAVQNLTAAVKTPGTDTDAATQLNAFVDRAVEQARGSAPASWGGSFAGDGSSSTVGLITVGAILVLGAGTAYTIFRRNRKRKEDEERAALDKLRVVVDEDITAYGETLDRLDFHPAEAGADDSMRADYERALDSYESAKIRMSKAQHPSDVRGVTQALDDGRFSLAVLEARRKGGEPPARRPPCFFDPRHGPSVADVRWSPSGGTAREVPVCAADEIRLREGEEPLGRTVDTGDGRRRPYWEAGPAYGPWAGGYFGGGLLPGLLVGTLLGSALSSPAYAAEYGGGDFDSGGDWSGGDFSGSDFDSSGFDGGGFGGGDLGGGGFDGGGF
>NZ_CP027306.1|WP_114246852.1|6437922_6438747_-|helix-turn-helix-domain-containing-protein
MQPARKKSKRITSWHLIGAQLAIFRKAARMTQAALAERCSVGEDTIASIEQGRRALQWDFAVLLDELLDTKGALQVAVSKVPQKERFSAFVQDFVDYEQEAVTLLSYQNQVVPGLLQTEEYIRFVFSCLYPPLEVDEQEEWVADRLDRQKLLSRKPRPMLHFLLEESILRSQIGDPAVLREQIRHLRQCMELPFLGLQIMPMKLPKHAGLAGPMVLLETPDHDHLVYVEGQLTSYLHEDPDDVSVLQQKYGMLRSQALSVEASARLLDELLGVT
>NZ_CP027306.1|WP_114246853.1|6438858_6439302_+|ATP-binding-protein
MNETTQLPHFREAFHRRERRSVPLVRQFVREALVDWACESRADDVLLCVSELVTNALLHGVPPGRGFRVPLYLEPADGILRVEVHDSGEGEVRPVVADATPDAEGGRGLLLVAALADKWGVGERNPGKVVWCEFEVSAGVGRGRSTR
>NZ_CP027306.1|WP_114246854.1|6439420_6440293_+|MBL-fold-metallo-hydrolase
MTDWYVDDRCTNCDVARQFAPELIGEEEGASRILRQPSDEAENRRLHAAVFACHTRSIRPASGQPDPALDPFPMALDDGVLVCGHNSRQTAGANSYLLRRPSGTVMMIDTPRWSPALAERYVATTGPVTDVLLTHRDHVAHGRRYADHFGARMWIHEGDLDAAPDADQVIRGLDPVEIGEGVTAHPLPGHTRGSVLYLADDRYCFSGDSFYWSRTTGDLEVAESVTWYSIEELAASLARTAGSLRFEWVLPGHGDRHRLDADEMSRRLHALAERTALLRPRPIDFTALRW
>NZ_CP027306.1|WP_114246855.1|6440375_6440843_-|hypothetical-protein
MLKLDAPGKSFQSVISNHNYPDAEAEWNGTGPGWSWMWVPYPFNSQRVQGQFTRHVFKRNQTSRDDLRAFIGENLAENDRRWSKAAAAALRGVTAQEFVLICSNVWAFALFEVNSGSTAKSGTAFYNRWVGRVNADPEAPYMLMAAEKPVVMAMG
>NZ_CP027306.1|WP_114246856.1|6441030_6442005_-|helix-turn-helix-domain-containing-protein
MSVIAVLVPDRLPGHQLTTPGLVFGTATTGHPGADYEVRLCAAPGLTTTGAPAPLRISVPWGLDGLADADVVLIPGQDADGPRDEPAPEVLAALRAAAARGCRIGAIGTGVFTLAATGLLDARRATTGWRHTEELARRHPRIEVDPVGTVVTDGRFLTSAGIFGGLDVCLRLLAQDHGERVAGETSRELLTPLLPHGDRVQETIDRELTESAGIEPTLRWLEARLHLPLTPADMAAHAGISLSSLNRRFQAQTGATPPQYLLRRRLERARELLEDTDEGVERVAARCGFTSPASLRHHFSRLTGTTPRAYRTRARGGPDRGGQW
>NZ_CP027306.1|WP_114246857.1|6442115_6443048_-|serine-protease
MDVARHRKRDNARQSARTSTTRTTRIGTKESPVFTRSSPSAAPSRSRKSRSRRAGRFAAVALAATACVTAMSGSANAIVNGQEATQRYPFMATLPQWAGDVHAQCGASLINSRWLVTAAHCVNPKALDGIVRIGSNDRESGGTVRHIKRTVVHPAYDVESEPSTNDIALVELDRPVSEQPIRIAKKVGAPGTPTRLLGFGTVLDTHNLPDAVFPDKLKQLDTRIGAVNECSPGRADKTRICTISKTPGAMACFGDSGGPQIQRGRDGRWELVGATSGDGDTDPTCGTGPGMYTNVPAYSKWIDKTIHAHR
>NZ_CP027306.1|WP_114246858.1|6443116_6444163_+|helix-turn-helix-domain-containing-protein
MIAVLVLDGVPGHELTGPGMCFGTAARHHPHVAYELRYCTAPGFRGTGSPAPFAIDTPWGLDGLADADTVLLPGHAGFRDEPASEVADALRAAADRGARIGAIGTGTFTLAATGLLDGRRAATGRQYAAELARRHPLIDVDPEGAVVDADPFHSAAGVLGGLDLCLHLITLDHGVSVATETERQVFMQLHAPAGTEDAIEPAAPPAAARHSLGPTTRWMEAHLDHPLTLSDIADHAGLTVRGLNRRFRAETGLSPLQYLLRARVQAAQRLLERGDEPVERIAARTGFGTPANLRHHFQHHTGTGPRIYRTAFRSMVAALTWADGKNAEAAEPAASGGADAPGAERRRR
>NZ_CP027306.1|WP_114246859.1|6444327_6448200_+|hypothetical-protein
MSRRFTSAGAVAAASAAVLALVGTALPATAAAPSPAAVESAVPADATVIRSAQLSVAVADDFPRVLAYTDKASGDQLLGSTQPVTAVTLNGTAHPVKLKGAPEVTASTARYTLTFSDLPGIEIDASLSVSGRATTFKVTAVRDTEAFRVGTIDIPGHDLVSVGSTDTGGATAFTRLDNDSTKTADVFSKVTADTAADKAPVGASYALLNTGSLAAAVESNSSYDKPSGATGGDDARFWHQARKADDGSVRVGVWSGQWTYRGDGASQPESGDNLPWAKVVVTPDANGDKAVDWQDGAVAFRSIGVVAPGSKDTPDRVITHIPFNFASQATHPFLRTLDDVKRVSLSTDGLGQRAILKGYASEGHDSAHPDYGGNYNKRAGGLKDLNELLKDGKKWGATFGVHVNATEAYPDAKAFDEKLVDKTRPGWNWLGQSYYIDQRRDINSGDLAKRFQQLRDETDRNLSFLYIDVYYTHGWIADKTLQTLQKQGWNVGSEWSDKFERGSLWSHWANDLDYGGATNKGLNSQIIRFIRNSEKDVWNNNPVLGQTAISEFEGWTNETDWNAFYDNIWQRNLPAKYLQQQKITRWDGNDITFTGDVRGTVEDGRRTFYDHGRKVLSGTDYLLPWDGGKKLYHYSKSGGTSSWAVPSTGTYTVYKLTDNGRVKAGTVKPVDGRITLTAKAGQPYVLYPDRAPEAADPKWGEGTPVDDPGFNDNGLSAWSKTGTVARDTDGQGRNSAELSGTGTAALSQSIHGLTPGKRYTASALIEVQPGKTRHTTLSIGGKSVAVDRSTAEDYVAASDWHGTYFQRAKVNFTAPANGRATLRIEAADGSAASVRADDVRIVASAPATRKNTVVHEDFEDVDQGWGPFLKGDAGGSTDPRTVISQLHTPYTQAGWNGKLVDDVIGGKESLKAHEENTGLVYRTAPWTVPMADGHRYKVEYDYQSSHASAYEWVDGYDRITAEGNPDSIETRTTSIGQQRTTGHFSETVTAGCGDTWTGLRKRGDAPDGADFVLDAFTVTDLGPAPASEQAACGTLTVDPAAETLEPGTANTVKASFTNYEATAATGVALSLTVPEGWKAEPAGAVTFDSVAAGAKVTGSWQVTPPVDAKYQTYGLSSETAYTVGGARRTLGAQTSVRTLPPPPTTDSWASDLDWTASENGWGPVERDLSNGEQGSGDGTPLKIGGTAYTKGLGSHAPAKIRYYLGGRCTSFTAQVGVDDAQTSRGSVQFSVTADGTEKVKSPVLKAADNAWSLTADTTGAKYVELVVGDGGDGNGNDHADWGDARFHCGS
>NZ_CP027306.1|WP_114249322.1|6448289_6450632_+|polysaccharide-lyase-8-family-protein
MPNPPVWSRRTLLALSTATALAVSLPGSATAAAAEADEFDTLRLRWTGIALGAGFDATAEPYASRLAETGTLARGFRSTMSPAADSLWPGITYNPPSGITQGYSRLWTMTQAYAQPGTGSTGDAALLADIIRGYDHLARTAYHSSVTPYGNWWEWQIGSPRILMDITSVLYEHLGAARVEAACAAVDHFIPDAVLRDYSGTSTGANRVDLCRSVALRGVLGRAPAKVALARDALSPVFPYVTGGDGLYADGSFIQHTTVAYSGTYGQVMLDGLGRLFALLAGSTWAVTDPNRQIILDSVERAYAPLIYNGLVMDSVNGRAISRGYLKSDELRVMRGDHFHGQGIIAGIALLAEGASAAERDRWHGMIKGWIARDRTSPILTARQFGIADLARLHAVQAAAVPAAPERVGHHLFAEMARAVHRRPDWAAGISMASERISHYECGNGENPRGWHTGAGMLYWWPGGKENDQYTDWFWPTVDFYRLPGTTVSTKRLADKAGGEWGAPKPAVKWVGGTTDGEFGAVGQHLKGLGSTLDARKSWFCVADTVICLGAGITSTDKVPVETIVDNRMLGEDGTAPLTVDDRTGPRWAHLAGHGGWVFPDGADLRTLREDRTGAWSDINTTSSTERRTRRYQTLWLDHGTDPVDAEYAYLLMPGASRRTVAARAADRHWLTVHANTAAAQAVAVRSLGVTAANFWQPGTAGPLSVTAAASVLVRERRRSTTVCVSGPDRTGAPVDVVWERPVREVVSADPGIEVRATGRRLVLRVEPGTEGGTLRCEVR
>NZ_CP027306.1|WP_114246860.1|6450978_6452562_+|acyl-CoA-carboxylase-subunit-beta
MTVVDETPGEPSDTRGRVAELLALREQARRGPSDRATEAQHAKGKLTARERIELLVDPGSFKEVEQLRRHRATGFGLEQKKPYTDGVITGWGTVDGRTVFVYAHDFRIFGGALGEAHATKIHKIMDMAISAGAPLVSLNDGAGARIQEGVSALAGYGGIFQRNTRASGVIPQISVMLGPCAGGAAYSPALTDFVFMVRETSQMFITGPDVVKAVTGEEISQNGLGGADVHAETSGVAHFAYDDEETCIAEVRYLIGMLPSNNRENPPTVASDDPADRRGDVLLDLVPADGNRPYDMHKVIEELVDDGDYLEIHERWARNIICALARLDGQVVGIVANQPQSLAGVLDIEASEKAARFVQMCDAFNIPIITLLDVPGFLPGVDQEHGGIIRHGAKLLYAYCNATVPRISLILRKAYGGAYIVMDSQSIGADLTYAWPTNEIAVMGAEGAANVIFRRQIADAEDPEAMRTRMVKEYKAELMHPYYAAERGLVDDVIDPAETREVLIASLAMLRSKHADLPSRKHGNPPQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027306_2	2.1\|640836\|25\|NZ_CP027306\|CRISPRCasFinder	640836-640860	25	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1175321-1175345	4	0.84
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	CP047034	Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence	26676-26702	4	0.852
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP015291	Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence	41016-41042	4	0.852
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP047040	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence	26647-26673	4	0.852
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	84788-84814	4	0.852
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	65059-65085	4	0.852
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	86527-86553	4	0.852
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP015215	Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence	50340-50366	4	0.852
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP045303	Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence	267086-267112	4	0.852
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP010421	Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence	96535-96561	4	0.852
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	349351-349379	4	0.862
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	455955-455981	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	135131-135157	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	162749-162775	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	131285-131311	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	155841-155867	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	162758-162784	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	136205-136231	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	155841-155867	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	129257-129283	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	129258-129284	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	155850-155876	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	155868-155894	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	155840-155866	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	135145-135171	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	135143-135169	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	135142-135168	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP015747	Shinella sp. HZN7 plasmid pShin-11, complete sequence	83746-83772	5	0.815
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1281771-1281797	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1336288-1336314	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1206726-1206752	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1266429-1266455	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1205823-1205849	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1238752-1238778	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1238743-1238769	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1206718-1206744	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1206074-1206100	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1206709-1206735	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1281893-1281919	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1281876-1281902	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1281868-1281894	6	0.778
NZ_CP027306_3	3.1\|2688537\|27\|NZ_CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	273908-273934	6	0.778
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	115568-115596	6	0.793
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP017303	Rhodococcus sp. YL-1 plasmid pYLL1 sequence	151779-151807	6	0.793
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP023550	Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence	181347-181375	6	0.793
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	68592-68620	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP045177	Streptomyces tsukubensis strain AT3 plasmid pST1, complete sequence	9501-9529	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP020041	Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence	16981-17009	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	516363-516391	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	MT498053	Streptomyces phage PHTowN, complete genome	26397-26425	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	MT897908	Streptomyces phage ShakeNBake, complete genome	26415-26443	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	229803-229831	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	615945-615973	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	166832-166860	7	0.759
NZ_CP027306_6	6.1\|4467291\|29\|NZ_CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP025617	Micrococcus luteus strain SGAir0127 plasmid pSGAir0127	65472-65500	8	0.724

1. spacer 2.1|640836|25|NZ_CP027306|CRISPRCasFinder matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 4, identity: 0.84

gcgcgcctctcacgatcgaggcgca	CRISPR spacer
gcgcgcctctgacgatcaaggcgtt	Protospacer
********** ******.*****.

2. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to CP047034 (Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

3. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP015291 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

4. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP047040 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

5. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

6. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP051471 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

7. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP030274 (Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

8. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP015215 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

9. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
gcaggtggtcgccctggagcgcggccc	Protospacer
* **  * *******************

10. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
gcaggtggtcgccctggagcgcggccc	Protospacer
* **  * *******************

11. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 4, identity: 0.862

tggggccgaaccggccgaccacc-cgggca	CRISPR spacer
tgcggccgaaccggtcgaccacctccggc-	Protospacer
** ***********.******** * ***

12. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
gcgccggttcgccctggaacgcggcct	Protospacer
* . **************.*******.

13. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

14. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

15. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

16. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

17. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

18. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

19. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

20. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

21. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

22. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

23. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

24. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

25. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

26. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

27. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

28. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP015747 (Shinella sp. HZN7 plasmid pShin-11, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cgcgcggctcgccgtggagcgcggccg	Protospacer
 * ****.***** ************

29. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

30. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

31. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

32. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

33. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

34. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

35. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

36. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

37. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

38. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

39. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

40. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

41. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

42. spacer 3.1|2688537|27|NZ_CP027306|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ccagcggttcggcctggagcgaggcga	Protospacer
  ********* ********* ***

43. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 6, identity: 0.793

tggggccgaaccggccgaccacccgggca	CRISPR spacer
ccgccccgaaccgggcgaccgcccgggca	Protospacer
. *  ********* *****.********

44. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 6, identity: 0.793

tggggccgaaccggccgaccacccgggca	CRISPR spacer
ccgccccgaaccgggccaccacccgggca	Protospacer
. *  ********* * ************

45. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP023550 (Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

tggggccgaaccggccgaccacccgggca-	CRISPR spacer
ctcggccgaaccggccgacga-ccgggcgc	Protospacer
.  **************** * ******.

46. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
gcgggccgagccgggcgaccacccggcag	Protospacer
  *******.**** ***********  .

47. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP045177 (Streptomyces tsukubensis strain AT3 plasmid pST1, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
gctggccgacccggccgaccgcccggggc	Protospacer
   ****** **********.******

48. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP020041 (Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
cccgcacgaaccggcccgccacccgggca	Protospacer
.  *  ********** .***********

49. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
aaacgacgaaccggccgcccacccgggaa	Protospacer
 .. * *********** ********* *

50. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to MT498053 (Streptomyces phage PHTowN, complete genome) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
tcgggccgaaccggccgaacaccatgtac	Protospacer
* **************** ****  *

51. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to MT897908 (Streptomyces phage ShakeNBake, complete genome) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
tcgggccgaaccggccgaacaccatgtac	Protospacer
* **************** ****  *

52. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
gccgcccgaaccggccgaccaccgggtct	Protospacer
   * ****************** ** *

53. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
ccgccccgaaccgggccaccacccgggcg	Protospacer
. *  ********* * ***********.

54. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
cgccgcggaactggccgaccacccgggtg	Protospacer
.*  ** ****.***************..

55. spacer 6.1|4467291|29|NZ_CP027306|CRISPRCasFinder matches to NZ_CP025617 (Micrococcus luteus strain SGAir0127 plasmid pSGAir0127) position: , mismatch: 8, identity: 0.724

tggggccgaaccggccgaccacccgggca	CRISPR spacer
catccccgaaccggccgaccagcagggcc	Protospacer
..   **************** * ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6924 : 163240

115

Streptococcus_phage(20.0%)

transposase,integrase,plate,tail

attL 4078:4093|attR 35348:35363

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4078:4093	attL	NA	NA	NA	NA
WP_114242332.1\|6924_8019_-\|integrase	integrase	NA	NA	NA	NA
WP_114242333.1\|8461_8830_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114242334.1\|9683_10403_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	7.8e-29	31.9
WP_114248739.1\|10627_11878_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_114242335.1\|13139_14516_+	erythromycin esterase family protein	NA	NA	NA	NA
WP_114242336.1\|14882_15602_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.5e-27	34.5
WP_157986947.1\|16095_16614_-	hypothetical protein	NA	NA	NA	NA
WP_114248740.1\|17256_17721_-	hypothetical protein	NA	NA	NA	NA
WP_114242338.1\|18377_18782_+	RidA family protein	NA	NA	NA	NA
WP_114242339.1\|19484_20441_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114242340.1\|20358_20955_-	hypothetical protein	NA	NA	NA	NA
WP_157986948.1\|26004_26448_-	hypothetical protein	NA	NA	NA	NA
WP_157986949.1\|27080_28889_+	hypothetical protein	NA	NA	NA	NA
WP_114242343.1\|29293_29944_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-09	36.5
WP_114242344.1\|30188_31628_+\|transposase	transposase	NA	NA	NA	NA
WP_114242345.1\|31661_32144_-	hypothetical protein	NA	NA	NA	NA
WP_114248741.1\|32701_33436_+	hypothetical protein	NA	NA	NA	NA
WP_114242346.1\|33767_34100_-	hypothetical protein	NA	NA	NA	NA
WP_114242347.1\|34342_34900_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_114242348.1\|34910_37160_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
35348:35363	attR	NA	NA	NA	NA
WP_114242349.1\|37579_38434_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_114242350.1\|38370_38601_+	hypothetical protein	NA	NA	NA	NA
WP_114242351.1\|40405_41344_+	formylglycine-generating enzyme family protein	A0A075BSL8	Microcystis_phage	1.1e-19	30.0
WP_114242352.1\|42150_43380_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_157986950.1\|43617_43785_+	hypothetical protein	NA	NA	NA	NA
WP_114242353.1\|43781_44276_+	hypothetical protein	NA	NA	NA	NA
WP_114242354.1\|44590_45568_-	alkylmercury lyase	NA	NA	NA	NA
WP_114242355.1\|45656_46061_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA
WP_114242356.1\|46291_47737_+\|transposase	transposase	NA	NA	NA	NA
WP_114242357.1\|47890_49498_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_114248742.1\|49542_50019_-	DUF4262 domain-containing protein	NA	NA	NA	NA
WP_157986951.1\|51417_51783_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_157986952.1\|52507_54562_+	hypothetical protein	NA	NA	NA	NA
WP_114248743.1\|56129_57086_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_157986953.1\|57877_58186_-	hypothetical protein	NA	NA	NA	NA
WP_114242362.1\|58565_59786_+	hypothetical protein	NA	NA	NA	NA
WP_157986954.1\|59986_60928_-	HTH domain-containing protein	NA	NA	NA	NA
WP_157986955.1\|63002_65552_+	hypothetical protein	NA	NA	NA	NA
WP_114242364.1\|66211_68167_-	hypothetical protein	NA	NA	NA	NA
WP_114242365.1\|68373_69723_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_114248744.1\|69833_70646_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_114242366.1\|70642_71509_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_114242367.1\|71505_73269_+	alpha-galactosidase	NA	NA	NA	NA
WP_114242368.1\|73292_74291_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_157986956.1\|75083_75224_+	hypothetical protein	NA	NA	NA	NA
WP_114242369.1\|75319_76891_+	hypothetical protein	NA	NA	NA	NA
WP_114242371.1\|77598_79443_+\|tail	phage tail sheath family protein	NA	NA	NA	NA
WP_114242372.1\|79454_79976_+\|tail	phage tail protein	NA	NA	NA	NA
WP_114242373.1\|79980_80712_+	hypothetical protein	NA	NA	NA	NA
WP_157986957.1\|82195_83392_+	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_157986958.1\|83388_83670_+	hypothetical protein	NA	NA	NA	NA
WP_114242376.1\|83666_84308_+	hypothetical protein	NA	NA	NA	NA
WP_114242377.1\|84339_84666_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_114242378.1\|84665_85784_+	hypothetical protein	NA	NA	NA	NA
WP_157986959.1\|85780_86308_+\|plate	baseplate assembly protein	NA	NA	NA	NA
WP_114242380.1\|86315_86669_+	hypothetical protein	NA	NA	NA	NA
WP_114248745.1\|86674_87037_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_114242381.1\|87033_89826_+\|plate	putative baseplate assembly protein	A0A1J0GW37	Streptomyces_phage	9.7e-19	27.0
WP_157986960.1\|89822_93020_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_114242383.1\|93016_95161_+	hypothetical protein	NA	NA	NA	NA
WP_114242384.1\|95231_96602_+	hypothetical protein	NA	NA	NA	NA
WP_114242385.1\|96618_97209_-	hypothetical protein	NA	NA	NA	NA
WP_157986961.1\|97212_97593_-	hypothetical protein	NA	NA	NA	NA
WP_114242387.1\|97614_98367_-	hypothetical protein	A0A0S1WEN4	Vibrio_phage	3.7e-05	46.2
WP_157986962.1\|98724_99252_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_114242389.1\|99595_101260_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.1e-33	28.1
WP_114242390.1\|101339_102974_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.7e-29	27.1
WP_157986963.1\|103601_103835_+	hypothetical protein	NA	NA	NA	NA
WP_114242392.1\|104561_105905_+	recombinase	NA	NA	NA	NA
WP_114242393.1\|107021_108470_+	amidase	NA	NA	NA	NA
WP_114242394.1\|109000_110020_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_114242395.1\|111761_112409_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_114242396.1\|112373_113003_-\|transposase	transposase	NA	NA	NA	NA
WP_114242397.1\|113196_114936_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_114248746.1\|115265_117479_-	MMPL family transporter	NA	NA	NA	NA
WP_114248747.1\|117747_118974_+	sensor histidine kinase	NA	NA	NA	NA
WP_114242398.1\|118970_119693_+	response regulator transcription factor	NA	NA	NA	NA
WP_114242399.1\|119927_120536_-	response regulator transcription factor	NA	NA	NA	NA
WP_114242400.1\|120736_121780_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_114242401.1\|122239_122539_+	hypothetical protein	NA	NA	NA	NA
WP_114242402.1\|122761_123559_+	hypothetical protein	NA	NA	NA	NA
WP_114242403.1\|123742_124207_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_114242405.1\|124988_125846_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_157986964.1\|126025_126163_+	hypothetical protein	NA	NA	NA	NA
WP_114248748.1\|126946_127543_+	hypothetical protein	NA	NA	NA	NA
WP_114242406.1\|128139_128472_-	DUF3703 domain-containing protein	NA	NA	NA	NA
WP_114242407.1\|128501_129212_-	cation transporter	NA	NA	NA	NA
WP_114242408.1\|129213_129549_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114242409.1\|130509_130965_-	hypothetical protein	NA	NA	NA	NA
WP_114248749.1\|131189_131462_-	hypothetical protein	NA	NA	NA	NA
WP_114248750.1\|131763_132063_+	restriction endonuclease	NA	NA	NA	NA
WP_114242411.1\|132419_133196_-	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
WP_114242412.1\|133260_134157_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_157986965.1\|134381_134537_-	hypothetical protein	NA	NA	NA	NA
WP_114242413.1\|134971_136201_+	hypothetical protein	NA	NA	NA	NA
WP_114242414.1\|137984_138269_-	hypothetical protein	NA	NA	NA	NA
WP_114242415.1\|138373_138883_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_157986966.1\|139246_139732_-	hypothetical protein	NA	NA	NA	NA
WP_114242417.1\|140624_141581_-	YafY family transcriptional regulator	NA	NA	NA	NA
WP_114248751.1\|141736_142735_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_114242418.1\|142821_143919_+	winged helix DNA-binding domain-containing protein	NA	NA	NA	NA
WP_157986967.1\|144074_144734_+	hypothetical protein	NA	NA	NA	NA
WP_114242420.1\|144921_145503_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_157986968.1\|146039_146258_-	hypothetical protein	NA	NA	NA	NA
WP_114242422.1\|146498_147488_+	hypothetical protein	NA	NA	NA	NA
WP_114242423.1\|147748_148825_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_114248752.1\|150182_151469_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_114248753.1\|153317_155387_-	hypothetical protein	NA	NA	NA	NA
WP_114242424.1\|155676_156201_+	ATP-binding protein	NA	NA	NA	NA
WP_157986969.1\|157067_157463_-	hypothetical protein	NA	NA	NA	NA
WP_114242427.1\|157947_159495_+	hypothetical protein	NA	NA	NA	NA
WP_114242429.1\|159811_160600_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_114242430.1\|160722_161370_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_114242431.1\|161570_162797_-\|transposase	transposase	I4AZM3	Saccharomonospora_phage	1.6e-82	54.7
WP_114242432.1\|162823_163240_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	1.7e-52	75.8

DBSCAN-SWA_2

306015 : 360176

Bacillus_phage(33.33%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114242489.1\|306015_307236_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_114242490.1\|308336_309791_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.0e-53	33.6
WP_114242491.1\|309878_310361_-	hypothetical protein	NA	NA	NA	NA
WP_114242492.1\|312579_313431_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	3.7e-30	36.0
WP_114242493.1\|313628_314618_+	hypothetical protein	NA	NA	NA	NA
WP_114242494.1\|314747_314930_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_157986977.1\|314966_315935_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_114242496.1\|316001_316538_-	CGNR zinc finger domain-containing protein	NA	NA	NA	NA
WP_114242497.1\|316536_318219_+	2-polyprenyl-6-methoxyphenol hydroxylase	NA	NA	NA	NA
WP_114242498.1\|319331_320474_+	DUF3103 family protein	NA	NA	NA	NA
WP_157986978.1\|320698_320953_+	hypothetical protein	NA	NA	NA	NA
WP_114242500.1\|320970_321174_-	hypothetical protein	NA	NA	NA	NA
WP_114248760.1\|321297_323328_-	hypothetical protein	NA	NA	NA	NA
WP_114242501.1\|323689_324832_-	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	2.0e-50	30.4
WP_114242502.1\|324976_326068_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_157986979.1\|326182_327523_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_114248761.1\|327593_328481_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_114242504.1\|328477_329356_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_114242505.1\|329488_331780_+	hypothetical protein	NA	NA	NA	NA
WP_114248762.1\|331791_334014_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_114242506.1\|334055_334907_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_114242507.1\|335124_335706_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_114242508.1\|337770_338514_+	hypothetical protein	NA	NA	NA	NA
WP_114242509.1\|338589_339513_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_114242510.1\|340290_341997_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_114242511.1\|345552_347682_-	protein kinase	T2AWK4	Cannes_8_virus	1.8e-12	29.0
WP_114242512.1\|349188_351324_-	ATP-binding protein	A0A2D2W2C3	Stenotrophomonas_phage	3.8e-07	30.1
WP_114242513.1\|351320_352025_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_114242514.1\|352021_355174_-	DUF11 domain-containing protein	NA	NA	NA	NA
WP_114242515.1\|355389_356118_-	response regulator transcription factor	NA	NA	NA	NA
WP_114242516.1\|356322_357651_+	hydrolytic protein	NA	NA	NA	NA
WP_114242517.1\|358166_359696_+\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	1.5e-69	35.6
WP_114242518.1\|359735_360176_+\|tail	phage tail protein	NA	NA	NA	NA

DBSCAN-SWA_3

563163 : 625786

Streptomyces_phage(36.36%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114242339.1\|563163_564120_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114242340.1\|564037_564634_-	hypothetical protein	NA	NA	NA	NA
WP_114242654.1\|565214_565934_+	cupin domain-containing protein	NA	NA	NA	NA
WP_114242655.1\|565930_566995_+	hypothetical protein	NA	NA	NA	NA
WP_114242656.1\|566991_568179_+	hypothetical protein	NA	NA	NA	NA
WP_114248772.1\|568217_569087_+	hypothetical protein	NA	NA	NA	NA
WP_114242657.1\|569186_569723_+	hypothetical protein	NA	NA	NA	NA
WP_114242658.1\|569805_571581_+	asparagine synthase	F2Y1H0	Organic_Lake_phycodnavirus	3.4e-09	26.0
WP_114242659.1\|571618_572980_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_114248773.1\|573453_574032_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA
WP_114242660.1\|574117_576247_-	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	6.5e-23	23.6
WP_114242661.1\|576246_577911_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_093898595.1\|577923_578013_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
WP_114242662.1\|578263_580783_-	sensor histidine kinase KdpD	NA	NA	NA	NA
WP_114248774.1\|581399_582656_-	hypothetical protein	NA	NA	NA	NA
WP_114248775.1\|582701_586025_-	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_114242664.1\|586668_587001_+	hypothetical protein	NA	NA	NA	NA
WP_015613078.1\|587420_587624_-	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	3.6e-16	62.5
WP_114242665.1\|587949_588552_-	DUF1349 domain-containing protein	NA	NA	NA	NA
WP_114242666.1\|588663_589248_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_114248776.1\|589262_589841_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_114248777.1\|590443_590854_-	VOC family protein	NA	NA	NA	NA
WP_114242667.1\|590935_591295_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114242668.1\|591673_592491_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_157986998.1\|593093_594680_+	hypothetical protein	NA	NA	NA	NA
WP_114242670.1\|595209_596511_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_157986999.1\|596647_598003_+	hypothetical protein	NA	NA	NA	NA
WP_114242672.1\|598461_599721_-	MFS transporter	NA	NA	NA	NA
WP_114242673.1\|599771_600530_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_114242674.1\|601016_601202_+	hypothetical protein	NA	NA	NA	NA
WP_157987000.1\|602063_604772_-	hypothetical protein	NA	NA	NA	NA
WP_114248778.1\|605010_606411_-\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	2.3e-125	55.9
WP_114242676.1\|606582_606945_-	AsnC family protein	NA	NA	NA	NA
WP_114242677.1\|607342_609055_+	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	5.8e-06	29.7
WP_114242678.1\|609051_609441_+	cytochrome c oxidase subunit 4	NA	NA	NA	NA
WP_114242679.1\|609450_611091_-	ubiquinol-cytochrome c reductase cytochrome b subunit	NA	NA	NA	NA
WP_114242680.1\|611737_612928_-	amino acid permease	NA	NA	NA	NA
WP_114248779.1\|613750_614983_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_114242681.1\|615700_615907_-	hypothetical protein	NA	NA	NA	NA
WP_114242682.1\|616585_616879_-	hypothetical protein	A0A1J0MCA5	Streptomyces_phage	4.7e-09	45.1
WP_114242683.1\|616875_617169_-	hypothetical protein	NA	NA	NA	NA
WP_114242684.1\|617165_618119_-	N-acetylmuramoyl-L-alanine amidase	A0A1J0MCN5	Streptomyces_phage	1.9e-67	62.2
WP_114242685.1\|618122_618431_-	hypothetical protein	NA	NA	NA	NA
WP_157987001.1\|618442_619237_-	hypothetical protein	A0A0S2MU58	Streptomyces_phage	1.9e-28	39.2
WP_114242687.1\|619390_620110_-	hypothetical protein	A0A2D1GNZ4	Streptomyces_phage	7.8e-05	44.9
WP_114242688.1\|621058_621562_+	hypothetical protein	NA	NA	NA	NA
WP_114242689.1\|621859_622090_-	hypothetical protein	NA	NA	NA	NA
WP_114242690.1\|623723_625121_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.8e-34	36.2
WP_114242691.1\|625153_625786_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.6e-41	51.1

DBSCAN-SWA_4

1012637 : 1070257

Streptococcus_phage(80.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114242975.1\|1012637_1013357_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-26	34.5
WP_114242976.1\|1014703_1015303_-	hypothetical protein	NA	NA	NA	NA
WP_114242977.1\|1015423_1016491_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_157987026.1\|1016559_1017540_+	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA
WP_157987027.1\|1017637_1017853_-	hypothetical protein	NA	NA	NA	NA
WP_114242980.1\|1017854_1018067_+	tautomerase	NA	NA	NA	NA
WP_157987028.1\|1018306_1018819_+	hypothetical protein	NA	NA	NA	NA
WP_114242981.1\|1019040_1019760_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	29.7
WP_114242982.1\|1022149_1022635_+	hypothetical protein	NA	NA	NA	NA
WP_114248818.1\|1022818_1023523_-	hypothetical protein	NA	NA	NA	NA
WP_114242983.1\|1023715_1024024_-	hypothetical protein	NA	NA	NA	NA
WP_157987029.1\|1024764_1024977_+	hypothetical protein	NA	NA	NA	NA
WP_114242985.1\|1025062_1026202_-	hydrolase	NA	NA	NA	NA
WP_114242986.1\|1026198_1027560_-	ArgE/DapE family deacylase	NA	NA	NA	NA
WP_157987030.1\|1027562_1029344_-	amidohydrolase family protein	NA	NA	NA	NA
WP_157987031.1\|1029435_1030203_+	hypothetical protein	NA	NA	NA	NA
WP_114242989.1\|1030488_1031733_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_114242990.1\|1031801_1032356_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114242991.1\|1034135_1035125_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_157987032.1\|1035165_1036080_+	ribokinase	NA	NA	NA	NA
WP_114242993.1\|1036124_1037108_+	nucleoside hydrolase	NA	NA	NA	NA
WP_114242994.1\|1037122_1038097_+	adenosine deaminase	NA	NA	NA	NA
WP_114242995.1\|1038596_1039178_+	hypothetical protein	NA	NA	NA	NA
WP_114242996.1\|1039516_1040236_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	7.5e-24	31.2
WP_114242997.1\|1040571_1041099_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_114242998.1\|1041189_1042626_+\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	6.0e-89	44.5
WP_114242999.1\|1043221_1044799_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_114243000.1\|1046442_1047162_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	2.9e-28	34.0
WP_157987033.1\|1047211_1047376_-	hypothetical protein	NA	NA	NA	NA
WP_114248819.1\|1047553_1048387_+	DUF1906 domain-containing protein	NA	NA	NA	NA
WP_157987034.1\|1049932_1051000_+	hypothetical protein	NA	NA	NA	NA
WP_157987035.1\|1052741_1052900_-	hypothetical protein	NA	NA	NA	NA
WP_114243003.1\|1053087_1053729_+	hypothetical protein	NA	NA	NA	NA
WP_114243004.1\|1056404_1057385_+	CehA/McbA family metallohydrolase	NA	NA	NA	NA
WP_114243005.1\|1057926_1058517_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_114243006.1\|1058509_1058776_+	hypothetical protein	NA	NA	NA	NA
WP_114243007.1\|1058926_1059577_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_114243008.1\|1059569_1060556_+	hypothetical protein	NA	NA	NA	NA
WP_114243009.1\|1061082_1062582_-	hypothetical protein	NA	NA	NA	NA
WP_157987036.1\|1063887_1064025_+	hypothetical protein	NA	NA	NA	NA
WP_114243010.1\|1064784_1065642_-	hypothetical protein	NA	NA	NA	NA
WP_114243011.1\|1066392_1067778_+	sporulation protein	NA	NA	NA	NA
WP_114243012.1\|1068367_1068730_+	signal peptidase I	NA	NA	NA	NA
WP_114243013.1\|1068818_1069163_+	DUF2750 domain-containing protein	NA	NA	NA	NA
WP_114243014.1\|1069633_1070257_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2140242 : 2147245

Streptomyces_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114243771.1\|2140242_2140947_+	nucleotidyltransferase	A0A1J0GW18	Streptomyces_phage	6.9e-14	35.8
WP_114243772.1\|2140993_2141803_-	nucleotidyltransferase domain-containing protein	K4K696	Caulobacter_phage	2.4e-10	37.1
WP_114243773.1\|2141806_2142829_-	ADP-ribosylglycohydrolase family protein	A0A172WZB4	Catopsilia_pomona_nucleopolyhedrovirus	5.0e-05	22.1
WP_114243774.1\|2142825_2143560_-	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	6.9e-25	51.1
WP_114243775.1\|2143556_2144636_-	AAA family ATPase	A0A2K8HHU5	Bacteriophage	4.7e-30	29.8
WP_114243776.1\|2144662_2145364_-	nicotinamide mononucleotide transporter	A0A0F6YPU8	Sinorhizobium_phage	8.4e-12	28.8
WP_114243777.1\|2145491_2146598_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_114243778.1\|2146597_2147245_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	7.3e-10	30.3

DBSCAN-SWA_6

4730960 : 4804856

Catovirus(18.18%)

transposase,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114245639.1\|4730960_4732511_+\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	6.7e-70	33.5
WP_072488539.1\|4732566_4733010_+\|tail	phage tail protein	NA	NA	NA	NA
WP_114245640.1\|4733009_4733468_+	hypothetical protein	NA	NA	NA	NA
WP_157987134.1\|4733637_4735452_+	hypothetical protein	NA	NA	NA	NA
WP_093549687.1\|4735493_4735931_+\|tail	phage tail protein	NA	NA	NA	NA
WP_114245643.1\|4735936_4736740_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_114245644.1\|4736739_4738779_+	VgrG-related protein	NA	NA	NA	NA
WP_114245645.1\|4738815_4739109_+	PaaR repeat-containing protein	NA	NA	NA	NA
WP_114245646.1\|4739115_4739529_+	GPW/gp25 family protein	A0A0E3F3H3	Synechococcus_phage	1.2e-10	33.3
WP_114245647.1\|4739525_4741484_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_114245648.1\|4741489_4742023_+\|tail	phage tail protein	NA	NA	NA	NA
WP_093896036.1\|4742700_4743234_+	discoidin domain-containing protein	NA	NA	NA	NA
WP_114245649.1\|4743375_4744734_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_114245650.1\|4744866_4746579_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_114245651.1\|4746630_4747866_-	cytochrome P450	NA	NA	NA	NA
WP_114245652.1\|4747923_4749366_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_114249171.1\|4749307_4749559_-	ferredoxin	NA	NA	NA	NA
WP_114245653.1\|4750296_4751874_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_157987135.1\|4751870_4752011_-	hypothetical protein	NA	NA	NA	NA
WP_114245655.1\|4753478_4754456_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_114245656.1\|4754511_4755816_+	FAD-binding protein	NA	NA	NA	NA
WP_114245657.1\|4755812_4756784_+	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_114245658.1\|4757917_4760086_+	DNA polymerase III subunit gamma and tau	A0A1L2BWV7	Bacteriophage	9.5e-46	33.6
WP_114245659.1\|4760179_4761430_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_114245660.1\|4761828_4763595_+	hypothetical protein	NA	NA	NA	NA
WP_114245661.1\|4763907_4765371_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_114245662.1\|4765482_4766397_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	3.2e-43	36.6
WP_114245663.1\|4766552_4767164_-	response regulator transcription factor	NA	NA	NA	NA
WP_114249172.1\|4767160_4768465_-	sensor histidine kinase	NA	NA	NA	NA
WP_114245664.1\|4768484_4769303_-	ABC transporter permease	NA	NA	NA	NA
WP_114245665.1\|4769302_4770340_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-19	30.2
WP_093894673.1\|4770922_4771243_-	Lsr2 family protein	K4NXG4	Streptomyces_phage	8.2e-15	46.2
WP_072488573.1\|4771635_4771902_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_114245666.1\|4771898_4772579_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_114245667.1\|4772575_4774825_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	7.5e-280	62.5
WP_114245668.1\|4775517_4776156_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_114245669.1\|4776227_4777028_+	maleylpyruvate isomerase family mycothiol-dependent enzyme	NA	NA	NA	NA
WP_114245670.1\|4777065_4777887_+	META domain-containing protein	NA	NA	NA	NA
WP_114245671.1\|4778249_4779776_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	7.1e-48	30.2
WP_114245672.1\|4779836_4780910_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.0e-60	40.1
WP_030929682.1\|4781084_4781342_-	DUF3073 domain-containing protein	NA	NA	NA	NA
WP_114249173.1\|4781654_4782737_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_114245673.1\|4782913_4783759_+	hypothetical protein	NA	NA	NA	NA
WP_003949541.1\|4784282_4784489_+	developmental transcriptional regulator BldC	NA	NA	NA	NA
WP_114245675.1\|4785591_4789524_-	ATP-dependent RNA helicase HrpA	A0A1V0SBU4	Catovirus	2.1e-59	28.6
WP_114245676.1\|4789679_4790114_+	hypothetical protein	NA	NA	NA	NA
WP_114245677.1\|4790173_4790965_+	DsbA family protein	NA	NA	NA	NA
WP_114245678.1\|4790961_4791810_+	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_030979942.1\|4792482_4792824_+	metallopeptidase family protein	NA	NA	NA	NA
WP_114245679.1\|4792970_4793540_+	hypothetical protein	NA	NA	NA	NA
WP_114245680.1\|4793779_4795942_+	DEAD/DEAH box helicase	A0A1V0SBR7	Catovirus	6.3e-42	31.1
WP_114249174.1\|4796269_4798321_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_114245681.1\|4798887_4800441_+	amino acid permease	NA	NA	NA	NA
WP_157987136.1\|4800835_4801111_-	hypothetical protein	NA	NA	NA	NA
WP_114245683.1\|4801727_4803227_+	lipase	NA	NA	NA	NA
WP_114242344.1\|4803416_4804856_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

8736497 : 8780057

Mycobacterium_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114248361.1\|8736497_8736698_-\|transposase	transposase	NA	NA	NA	NA
WP_114248362.1\|8736848_8737847_-	acetylxylan esterase	NA	NA	NA	NA
WP_114248363.1\|8739383_8739944_+	hypothetical protein	NA	NA	NA	NA
WP_157987252.1\|8739901_8740333_-	hypothetical protein	NA	NA	NA	NA
WP_114248365.1\|8740428_8741880_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_114248366.1\|8741876_8742557_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.7e-33	35.0
WP_114248367.1\|8742868_8743174_+	hypothetical protein	NA	NA	NA	NA
WP_114248368.1\|8743170_8745177_+	beta-N-acetylglucosaminidase	NA	NA	NA	NA
WP_114248369.1\|8746918_8748265_-	hypothetical protein	NA	NA	NA	NA
WP_114248370.1\|8748373_8749270_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_114248371.1\|8750052_8750439_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_114248372.1\|8750571_8751237_+	class II aldolase/adducin family protein	NA	NA	NA	NA
WP_114248373.1\|8751233_8751674_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_114248376.1\|8753362_8754373_-	L-asparagine oxygenase	NA	NA	NA	NA
WP_114248377.1\|8754413_8755457_-	hypothetical protein	NA	NA	NA	NA
WP_114248378.1\|8755739_8756162_-	winged helix-turn-helix transcriptional regulator	A0A218MNF3	uncultured_virus	2.8e-10	48.5
WP_114248379.1\|8756266_8757658_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_114248380.1\|8758313_8758499_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_114248381.1\|8759082_8759613_-	hypothetical protein	NA	NA	NA	NA
WP_114248382.1\|8759680_8761195_-	serine/threonine protein kinase	A0A2H4UVE2	Bodo_saltans_virus	1.4e-08	25.0
WP_114249492.1\|8761115_8762144_-	NUDIX hydrolase	NA	NA	NA	NA
WP_114248383.1\|8763309_8763651_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114248384.1\|8763647_8765363_+	SulP family inorganic anion transporter	NA	NA	NA	NA
WP_114248385.1\|8765359_8765776_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_114248386.1\|8765772_8766198_+	ATP-binding protein	NA	NA	NA	NA
WP_114248387.1\|8766217_8766625_+	anti-sigma factor antagonist	NA	NA	NA	NA
WP_114248388.1\|8766665_8767028_+	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_114248389.1\|8767124_8767475_-	hypothetical protein	NA	NA	NA	NA
WP_114249493.1\|8767887_8768250_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114248391.1\|8768757_8769279_-	hypothetical protein	NA	NA	NA	NA
WP_157987253.1\|8769509_8769701_-	hypothetical protein	NA	NA	NA	NA
WP_114248393.1\|8769724_8770129_-	ATP-binding protein	NA	NA	NA	NA
WP_114249494.1\|8770178_8770523_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114249495.1\|8770531_8770717_-	hypothetical protein	NA	NA	NA	NA
WP_114248394.1\|8770868_8771417_-	hypothetical protein	NA	NA	NA	NA
WP_114248395.1\|8772079_8773549_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.0e-35	32.6
WP_114248396.1\|8773573_8774035_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_157987254.1\|8773934_8774372_-\|transposase	transposase	Q8W6R2	Burkholderia_virus	2.3e-20	53.6
WP_114242690.1\|8774355_8775753_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.8e-34	36.2
WP_114248398.1\|8775785_8776418_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	2.0e-41	51.1
WP_114248399.1\|8776423_8776750_-\|transposase	transposase	A0A2P1JR43	Mycobacterium_phage	2.6e-08	44.6
WP_157987255.1\|8776930_8777149_-	hypothetical protein	NA	NA	NA	NA
WP_157987256.1\|8777070_8777574_-	hypothetical protein	NA	NA	NA	NA
WP_114248401.1\|8777691_8778570_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_114248402.1\|8778664_8779114_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_114248403.1\|8779286_8780057_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.6e-56	45.5

DBSCAN-SWA_8

8818154 : 8952357

Planktothrix_phage(55.56%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114248412.1\|8818154_8819369_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_114248413.1\|8819821_8821180_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_114248414.1\|8821176_8822220_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.6e-17	31.8
WP_114249499.1\|8822234_8824094_-	dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-13	33.0
WP_114248415.1\|8824182_8825169_-	ABC transporter permease	NA	NA	NA	NA
WP_114249500.1\|8825220_8826819_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_157987260.1\|8826975_8828733_+	DUF885 family protein	NA	NA	NA	NA
WP_114248417.1\|8828987_8829371_+	DUF5132 domain-containing protein	NA	NA	NA	NA
WP_114248418.1\|8829784_8830114_+	hypothetical protein	NA	NA	NA	NA
WP_114248419.1\|8830149_8830353_+	hypothetical protein	NA	NA	NA	NA
WP_114248420.1\|8830352_8831120_+	thioesterase	NA	NA	NA	NA
WP_157987261.1\|8831370_8832513_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_114248423.1\|8834677_8835742_+	hypothetical protein	NA	NA	NA	NA
WP_114248425.1\|8837681_8838185_-	N-acetyltransferase	NA	NA	NA	NA
WP_114249502.1\|8840226_8840610_+	hypothetical protein	NA	NA	NA	NA
WP_114248426.1\|8840786_8841392_+	hypothetical protein	NA	NA	NA	NA
WP_114249503.1\|8841354_8842140_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114242344.1\|8842536_8843976_+\|transposase	transposase	NA	NA	NA	NA
WP_157987262.1\|8844080_8844221_-	hypothetical protein	NA	NA	NA	NA
WP_114248427.1\|8844305_8844689_-	VOC family protein	NA	NA	NA	NA
WP_114248428.1\|8845066_8845579_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_114248429.1\|8845572_8846073_-	cupin domain-containing protein	NA	NA	NA	NA
WP_114249504.1\|8846318_8846735_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_114248430.1\|8847578_8847992_+	hypothetical protein	NA	NA	NA	NA
WP_114248432.1\|8851107_8852490_-	carotenoid oxygenase	NA	NA	NA	NA
WP_114248433.1\|8852521_8853133_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_114248435.1\|8854445_8855462_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_114248436.1\|8855961_8857213_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.2e-74	53.3
WP_114249505.1\|8857489_8858413_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_157987263.1\|8858520_8859801_-	hypothetical protein	NA	NA	NA	NA
WP_157987264.1\|8859832_8859994_-	hypothetical protein	NA	NA	NA	NA
WP_114248437.1\|8860978_8861755_-	hypothetical protein	NA	NA	NA	NA
WP_114248439.1\|8862825_8863470_-	dihydrofolate reductase	NA	NA	NA	NA
WP_114247314.1\|8863574_8864072_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114248440.1\|8864188_8865022_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	1.2e-78	57.4
WP_114242344.1\|8865259_8866699_+\|transposase	transposase	NA	NA	NA	NA
WP_114248441.1\|8867174_8867720_+	hypothetical protein	NA	NA	NA	NA
WP_114249503.1\|8867682_8868468_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114248442.1\|8869636_8870470_-	GlcNAc-PI de-N-acetylase	NA	NA	NA	NA
WP_157987265.1\|8870616_8871261_+	hypothetical protein	NA	NA	NA	NA
WP_114249506.1\|8871321_8872167_-\|transposase	transposase	NA	NA	NA	NA
WP_114249507.1\|8872390_8872864_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_114248783.1\|8873030_8874164_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_114249508.1\|8876531_8876978_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_114249503.1\|8878917_8879703_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114248444.1\|8879665_8880205_-	hypothetical protein	NA	NA	NA	NA
WP_114242344.1\|8880330_8881770_-\|transposase	transposase	NA	NA	NA	NA
WP_114248445.1\|8882998_8883496_-	hypothetical protein	NA	NA	NA	NA
WP_114248446.1\|8883956_8884472_-	hypothetical protein	NA	NA	NA	NA
WP_114248447.1\|8884974_8888754_-	CHAT domain-containing protein	NA	NA	NA	NA
WP_114248448.1\|8888883_8889228_+	hypothetical protein	NA	NA	NA	NA
WP_114248449.1\|8889238_8890150_+	hypothetical protein	NA	NA	NA	NA
WP_114248450.1\|8890492_8891212_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	3.9e-28	35.2
WP_157987266.1\|8891559_8892378_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_157987267.1\|8892645_8893860_+	hypothetical protein	NA	NA	NA	NA
WP_114248453.1\|8893862_8894954_+	esterase	NA	NA	NA	NA
WP_114248454.1\|8895345_8895978_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_114249509.1\|8896029_8896512_+	DNA-binding protein	NA	NA	NA	NA
WP_157987268.1\|8896713_8896992_-	hypothetical protein	NA	NA	NA	NA
WP_114242340.1\|8897297_8897894_+	hypothetical protein	NA	NA	NA	NA
WP_114242339.1\|8897811_8898768_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114242340.1\|8899148_8899745_+	hypothetical protein	NA	NA	NA	NA
WP_114242339.1\|8899662_8900619_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114248456.1\|8901755_8902841_+\|transposase	transposase	NA	NA	NA	NA
WP_157987269.1\|8903375_8903618_+	hypothetical protein	NA	NA	NA	NA
WP_114248457.1\|8903686_8906263_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_114248458.1\|8906253_8907036_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.5e-29	35.0
WP_114248459.1\|8907744_8908464_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	4.6e-29	30.6
WP_114248460.1\|8908673_8909210_+	hypothetical protein	NA	NA	NA	NA
WP_114248461.1\|8910220_8910715_-	hypothetical protein	NA	NA	NA	NA
WP_114248462.1\|8911490_8912357_+	DUF4132 domain-containing protein	NA	NA	NA	NA
WP_114248463.1\|8912353_8917267_+	DNA-binding protein	NA	NA	NA	NA
WP_114248464.1\|8917382_8918537_+	AAA family ATPase	NA	NA	NA	NA
WP_114248465.1\|8918533_8922295_+	VWA domain-containing protein	NA	NA	NA	NA
WP_114248466.1\|8922291_8924163_+	hypothetical protein	NA	NA	NA	NA
WP_114248467.1\|8925400_8925661_-	hypothetical protein	NA	NA	NA	NA
WP_114248468.1\|8925728_8926490_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_114248469.1\|8926486_8927275_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-13	35.2
WP_114248470.1\|8927271_8928327_-	iron ABC transporter permease	NA	NA	NA	NA
WP_114248471.1\|8928323_8929310_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_114248472.1\|8930445_8931237_+	maleylpyruvate isomerase family mycothiol-dependent enzyme	NA	NA	NA	NA
WP_157987270.1\|8931289_8931637_-	hypothetical protein	NA	NA	NA	NA
WP_114248474.1\|8932392_8933229_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_114248475.1\|8933319_8933820_+	cupin domain-containing protein	NA	NA	NA	NA
WP_114242340.1\|8935043_8935640_+	hypothetical protein	NA	NA	NA	NA
WP_114242339.1\|8935557_8936514_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114248476.1\|8937385_8938069_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-30	39.7
WP_114248477.1\|8938068_8940237_+	permease	NA	NA	NA	NA
WP_114248478.1\|8940580_8940847_+	hypothetical protein	NA	NA	NA	NA
WP_114248783.1\|8942761_8943895_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_114248479.1\|8944051_8944264_-	hypothetical protein	NA	NA	NA	NA
WP_114248480.1\|8945751_8946222_-	hypothetical protein	NA	NA	NA	NA
WP_114249510.1\|8946444_8946963_-	cupin domain-containing protein	NA	NA	NA	NA
WP_157987271.1\|8947096_8947447_-	hypothetical protein	NA	NA	NA	NA
WP_157987272.1\|8947443_8947599_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_114248483.1\|8948443_8948962_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_114249511.1\|8949160_8949949_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_114242339.1\|8951400_8952357_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

9006918 : 9056630

Streptomyces_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114242344.1\|9006918_9008358_+\|transposase	transposase	NA	NA	NA	NA
WP_114248501.1\|9008471_9009314_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.2e-82	58.2
WP_157987274.1\|9009322_9010303_-	hypothetical protein	NA	NA	NA	NA
WP_114248503.1\|9010637_9012851_+	hypothetical protein	NA	NA	NA	NA
WP_114242339.1\|9013370_9014327_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114242340.1\|9014244_9014841_-	hypothetical protein	NA	NA	NA	NA
WP_114249516.1\|9015239_9016391_-	hypothetical protein	NA	NA	NA	NA
WP_114248504.1\|9016516_9017935_-	amino acid permease	NA	NA	NA	NA
WP_114249517.1\|9018047_9018506_-	RidA family protein	NA	NA	NA	NA
WP_114248505.1\|9018734_9020402_+	PucR family transcriptional regulator	NA	NA	NA	NA
WP_114248506.1\|9020898_9023760_+	SpoIIE family protein phosphatase	A0A1J0MCT1	Streptomyces_phage	1.4e-09	43.9
WP_157987275.1\|9025042_9025621_-	hypothetical protein	D7NW85	Streptomyces_phage	3.0e-07	37.1
WP_114248508.1\|9025636_9025951_+	hypothetical protein	NA	NA	NA	NA
WP_114248509.1\|9026019_9027495_+	amidohydrolase family protein	NA	NA	NA	NA
WP_157987276.1\|9028190_9028355_+	hypothetical protein	NA	NA	NA	NA
WP_114249518.1\|9028680_9028917_-	hypothetical protein	NA	NA	NA	NA
WP_114248510.1\|9029403_9030312_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_114248511.1\|9030408_9031368_-	hypothetical protein	NA	NA	NA	NA
WP_114248512.1\|9031364_9031706_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114248513.1\|9031832_9032144_+\|transposase	transposase	NA	NA	NA	NA
WP_114248514.1\|9032201_9032432_-	hypothetical protein	NA	NA	NA	NA
WP_114248515.1\|9034679_9036281_+	peptide-N4-asparagine amidase A	NA	NA	NA	NA
WP_157987277.1\|9036463_9036637_-	hypothetical protein	NA	NA	NA	NA
WP_114248516.1\|9036959_9037979_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_114248517.1\|9038035_9038512_-	hypothetical protein	NA	NA	NA	NA
WP_114248518.1\|9038645_9039902_+	sensor histidine kinase	NA	NA	NA	NA
WP_114248519.1\|9039889_9040534_+	response regulator transcription factor	NA	NA	NA	NA
WP_114248520.1\|9041667_9042888_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_114248521.1\|9043051_9043441_-	hypothetical protein	NA	NA	NA	NA
WP_114248522.1\|9045480_9045930_-	hypothetical protein	NA	NA	NA	NA
WP_114248523.1\|9045929_9046193_-	hypothetical protein	NA	NA	NA	NA
WP_114248524.1\|9046199_9046640_+	hypothetical protein	NA	NA	NA	NA
WP_114248525.1\|9048958_9049456_-	hypothetical protein	NA	NA	NA	NA
WP_114248783.1\|9049465_9050599_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_114248526.1\|9050563_9053764_-	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_114248527.1\|9053760_9054174_-	hypothetical protein	NA	NA	NA	NA
WP_114248528.1\|9054607_9055447_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114248529.1\|9055775_9056630_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

9148400 : 9203917

Gordonia_phage(28.57%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157987284.1\|9148400_9148760_+\|transposase	transposase	A0A1B3AZE5	Gordonia_phage	3.4e-09	65.0
WP_114248596.1\|9148856_9149438_-	hypothetical protein	NA	NA	NA	NA
WP_157987285.1\|9150272_9150677_+	hypothetical protein	NA	NA	NA	NA
WP_114248598.1\|9151576_9151882_+	hypothetical protein	NA	NA	NA	NA
WP_114248599.1\|9153272_9153743_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_114248600.1\|9153967_9154225_+	hypothetical protein	NA	NA	NA	NA
WP_114248601.1\|9154412_9154601_+	hypothetical protein	NA	NA	NA	NA
WP_157987286.1\|9154594_9155611_+	hypothetical protein	A0A249XNQ1	Brevibacterium_phage	2.8e-40	37.6
WP_114249530.1\|9155861_9157010_-	XdhC family protein	NA	NA	NA	NA
WP_114248602.1\|9157002_9159165_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_114248603.1\|9159161_9160154_-	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA
WP_114248604.1\|9160150_9160708_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0P0IVM8	Acinetobacter_phage	4.8e-18	37.0
WP_114248605.1\|9160947_9161595_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_114248606.1\|9163704_9163977_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_114248607.1\|9167039_9167789_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_114248608.1\|9167923_9168970_+	hypothetical protein	NA	NA	NA	NA
WP_114248609.1\|9170716_9171175_+\|tail	lamin tail domain-containing protein	NA	NA	NA	NA
WP_157987287.1\|9171688_9172297_+	hypothetical protein	NA	NA	NA	NA
WP_114249531.1\|9172631_9173096_+	hypothetical protein	NA	NA	NA	NA
WP_114248610.1\|9173341_9173617_-	hypothetical protein	NA	NA	NA	NA
WP_114248611.1\|9174593_9174794_-	CsbD family protein	NA	NA	NA	NA
WP_114249532.1\|9175207_9176488_+	GNAT family N-acetyltransferase	R4TQL5	Phaeocystis_globosa_virus	9.9e-19	31.8
WP_114249533.1\|9176674_9177247_-	hypothetical protein	NA	NA	NA	NA
WP_114248612.1\|9177868_9178771_-	hypothetical protein	NA	NA	NA	NA
WP_078852651.1\|9178802_9179417_-	cell wall protein	NA	NA	NA	NA
WP_030926101.1\|9179428_9179851_-	hypothetical protein	NA	NA	NA	NA
WP_114249534.1\|9181093_9182461_-	RtcB family protein	A2RQD0	Archaeal_BJ1_virus	9.1e-95	42.8
WP_114248613.1\|9182526_9183510_-	CapA family protein	NA	NA	NA	NA
WP_114248614.1\|9183536_9184340_-	archease	NA	NA	NA	NA
WP_114248615.1\|9184702_9185158_+	DUF1772 domain-containing protein	NA	NA	NA	NA
WP_114248616.1\|9185577_9186285_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_114248617.1\|9186429_9187734_-	amidohydrolase family protein	NA	NA	NA	NA
WP_114248618.1\|9187802_9189137_-	amidohydrolase family protein	NA	NA	NA	NA
WP_157987288.1\|9189546_9189714_+	hypothetical protein	NA	NA	NA	NA
WP_114248619.1\|9190276_9191146_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_157987289.1\|9191714_9191915_+	hypothetical protein	NA	NA	NA	NA
WP_114249535.1\|9192086_9192599_+	CGNR zinc finger domain-containing protein	NA	NA	NA	NA
WP_114248621.1\|9195050_9195839_+	DUF1963 domain-containing protein	NA	NA	NA	NA
WP_114248622.1\|9196151_9197063_-	hypothetical protein	NA	NA	NA	NA
WP_114242339.1\|9197253_9198210_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114242340.1\|9198127_9198724_-	hypothetical protein	NA	NA	NA	NA
WP_114248623.1\|9199191_9199584_-	hypothetical protein	NA	NA	NA	NA
WP_114248624.1\|9199567_9200866_-	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_114248625.1\|9201481_9202324_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	1.0e-80	56.0
WP_114248626.1\|9202665_9203715_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_114248627.1\|9203746_9203917_-\|transposase	transposase	A0A1B3AZE5	Gordonia_phage	1.4e-10	50.8

DBSCAN-SWA_11

9300982 : 9345879

Bacillus_phage(20.0%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114248697.1\|9300982_9301450_+\|tail	lamin tail domain-containing protein	NA	NA	NA	NA
WP_157987302.1\|9301783_9302155_+	hypothetical protein	NA	NA	NA	NA
WP_114248699.1\|9302179_9303359_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	4.0e-30	35.0
WP_114248700.1\|9303417_9304221_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_114248701.1\|9304306_9305104_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114248702.1\|9305704_9306667_+	hypothetical protein	NA	NA	NA	NA
WP_114248703.1\|9306726_9308844_+	hypothetical protein	NA	NA	NA	NA
WP_093899591.1\|9310063_9310648_+	stress protein	A0A2P1N0C0	Streptomyces_phage	4.2e-41	46.0
WP_114248705.1\|9311084_9311825_-	hypothetical protein	NA	NA	NA	NA
WP_114248706.1\|9311830_9313033_-	enoyl-[acyl-carrier-protein] reductase FabV	NA	NA	NA	NA
WP_157987303.1\|9313035_9313635_-	hypothetical protein	NA	NA	NA	NA
WP_114248708.1\|9314945_9316814_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	5.0e-136	49.5
WP_114248709.1\|9316810_9317431_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_114248710.1\|9318089_9318845_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_114248711.1\|9319809_9320625_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_114248712.1\|9321036_9322131_+	galactosyldiacylglycerol synthase	NA	NA	NA	NA
WP_157987304.1\|9322557_9322917_-\|transposase	transposase	NA	NA	NA	NA
WP_114248714.1\|9323070_9325347_-	FUSC family protein	NA	NA	NA	NA
WP_114248715.1\|9325526_9326066_+	exonuclease SbcC	NA	NA	NA	NA
WP_114248716.1\|9326385_9327591_+	cysteine desulfurase-like protein	NA	NA	NA	NA
WP_093896711.1\|9327875_9328058_-	hypothetical protein	NA	NA	NA	NA
WP_114248717.1\|9328989_9329949_+	nitronate monooxygenase	NA	NA	NA	NA
WP_114248718.1\|9330020_9330266_+	hypothetical protein	NA	NA	NA	NA
WP_157987305.1\|9330285_9330477_-	hypothetical protein	NA	NA	NA	NA
WP_114248719.1\|9330564_9331290_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_114248720.1\|9331395_9331713_-	hypothetical protein	NA	NA	NA	NA
WP_114248721.1\|9332043_9333171_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_114248722.1\|9333155_9334487_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_114248723.1\|9334492_9335449_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_114248724.1\|9335445_9336261_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_114248725.1\|9336266_9338183_+	alpha-galactosidase	NA	NA	NA	NA
WP_114248726.1\|9338248_9339277_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_157987306.1\|9339966_9340494_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_157987307.1\|9341122_9342403_+	hypothetical protein	NA	NA	NA	NA
WP_114248729.1\|9343116_9343356_+	hypothetical protein	NA	NA	NA	NA
WP_157987308.1\|9343560_9343797_-\|transposase	transposase	NA	NA	NA	NA
WP_114249543.1\|9344099_9345299_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.1e-34	36.2
WP_114248731.1\|9345246_9345879_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.6e-14	33.5

DBSCAN-SWA_12

9478048 : 9554255

Saccharomonospora_phage(33.33%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114242432.1\|9478048_9478465_-\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	1.7e-52	75.8
WP_114242431.1\|9478491_9479718_+\|transposase	transposase	I4AZM3	Saccharomonospora_phage	1.6e-82	54.7
WP_114242430.1\|9479918_9480566_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_114242429.1\|9480688_9481477_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_114242427.1\|9481793_9483341_-	hypothetical protein	NA	NA	NA	NA
WP_157986969.1\|9483825_9484221_+	hypothetical protein	NA	NA	NA	NA
WP_114242424.1\|9485087_9485612_-	ATP-binding protein	NA	NA	NA	NA
WP_114248753.1\|9485901_9487971_+	hypothetical protein	NA	NA	NA	NA
WP_114248752.1\|9489819_9491106_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_114242423.1\|9492463_9493540_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_114242422.1\|9493800_9494790_-	hypothetical protein	NA	NA	NA	NA
WP_157986968.1\|9495030_9495249_+	hypothetical protein	NA	NA	NA	NA
WP_114242420.1\|9495785_9496367_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_157986967.1\|9496554_9497214_-	hypothetical protein	NA	NA	NA	NA
WP_114242418.1\|9497369_9498467_-	winged helix DNA-binding domain-containing protein	NA	NA	NA	NA
WP_114248751.1\|9498553_9499552_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_114242417.1\|9499707_9500664_+	YafY family transcriptional regulator	NA	NA	NA	NA
WP_157986966.1\|9501556_9502042_+	hypothetical protein	NA	NA	NA	NA
WP_114242415.1\|9502405_9502915_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_114242414.1\|9503019_9503304_+	hypothetical protein	NA	NA	NA	NA
WP_114242413.1\|9505087_9506317_-	hypothetical protein	NA	NA	NA	NA
WP_157986965.1\|9506751_9506907_+	hypothetical protein	NA	NA	NA	NA
WP_114242412.1\|9507131_9508028_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114242411.1\|9508092_9508869_+	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
WP_114248750.1\|9509225_9509525_-	restriction endonuclease	NA	NA	NA	NA
WP_114248749.1\|9509826_9510099_+	hypothetical protein	NA	NA	NA	NA
WP_114242409.1\|9510323_9510779_+	hypothetical protein	NA	NA	NA	NA
WP_114242408.1\|9511739_9512075_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114242407.1\|9512076_9512787_+	cation transporter	NA	NA	NA	NA
WP_114242406.1\|9512816_9513149_+	DUF3703 domain-containing protein	NA	NA	NA	NA
WP_114248748.1\|9513745_9514342_-	hypothetical protein	NA	NA	NA	NA
WP_157986964.1\|9515125_9515263_-	hypothetical protein	NA	NA	NA	NA
WP_114242405.1\|9515442_9516300_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_114242403.1\|9517081_9517546_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_114242402.1\|9517729_9518527_-	hypothetical protein	NA	NA	NA	NA
WP_114242401.1\|9518749_9519049_-	hypothetical protein	NA	NA	NA	NA
WP_114242400.1\|9519508_9520552_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_114242399.1\|9520752_9521361_+	response regulator transcription factor	NA	NA	NA	NA
WP_114242398.1\|9521595_9522318_-	response regulator transcription factor	NA	NA	NA	NA
WP_114248747.1\|9522314_9523541_-	sensor histidine kinase	NA	NA	NA	NA
WP_114248746.1\|9523809_9526023_+	MMPL family transporter	NA	NA	NA	NA
WP_114242397.1\|9526352_9528092_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_114242396.1\|9528285_9528915_+\|transposase	transposase	NA	NA	NA	NA
WP_114242395.1\|9528879_9529527_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_114242394.1\|9531268_9532288_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_114242393.1\|9532818_9534267_-	amidase	NA	NA	NA	NA
WP_114242392.1\|9535383_9536727_-	recombinase	NA	NA	NA	NA
WP_157986963.1\|9537453_9537687_-	hypothetical protein	NA	NA	NA	NA
WP_114242390.1\|9538314_9539949_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.7e-29	27.1
WP_114242389.1\|9540028_9541693_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.1e-33	28.1
WP_157986962.1\|9542036_9542564_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_114242387.1\|9542921_9543674_+	hypothetical protein	A0A0S1WEN4	Vibrio_phage	3.7e-05	46.2
WP_157986961.1\|9543695_9544076_+	hypothetical protein	NA	NA	NA	NA
WP_114242385.1\|9544079_9544670_+	hypothetical protein	NA	NA	NA	NA
WP_114242384.1\|9544686_9546057_-	hypothetical protein	NA	NA	NA	NA
WP_114242383.1\|9546127_9548272_-	hypothetical protein	NA	NA	NA	NA
WP_157986960.1\|9548268_9551466_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_114242381.1\|9551462_9554255_-\|plate	putative baseplate assembly protein	A0A1J0GW37	Streptomyces_phage	9.7e-19	27.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027306

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection