CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP031126	Bacillus licheniformis strain 0DA23-1 chromosome, complete genome	0 crisprs	csa3,WYL,DinG,DEDDh,cas3	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

616370 : 660791

Bacillus_phage(55.26%)

plate,holin,tRNA,terminase,protease,integrase,portal,tail,head,capsid

attL 626620:626637|attR 663896:663913

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003179225.1\|616370_616847_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_003179227.1\|616827_617517_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_003179229.1\|617529_617988_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_003179232.1\|617977_619003_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.1e-67	42.5
WP_080624180.1\|619242_621168_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.2e-61	32.3
WP_003179234.1\|621314_621821_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_003179237.1\|621824_622472_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_003179239.1\|622514_622694_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_011201569.1\|622700_623477_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	5.3e-15	28.7
WP_003179243.1\|623522_623717_-	YdiK family protein	NA	NA	NA	NA
WP_003179245.1\|623713_624448_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003179248.1\|624673_624958_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	2.9e-19	52.7
WP_003179250.1\|625002_626637_+	chaperonin GroEL	A0A219YK78	uncultured_virus	2.1e-159	57.7
626620:626637	attL	NA	NA	NA	NA
WP_025807787.1\|626718_627936_-\|integrase	site-specific integrase	A0A0C5AN64	Paenibacillus_phage	8.0e-143	64.9
WP_025807788.1\|627949_628582_-	helix-turn-helix domain-containing protein	A0A1B2APZ3	Phage_Wrath	1.9e-71	62.4
WP_025807791.1\|628746_628995_+	helix-turn-helix transcriptional regulator	A0A1B2APZ4	Phage_Wrath	1.1e-19	65.8
WP_025807793.1\|629021_629216_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025807794.1\|629228_629930_+	Rha family transcriptional regulator	A0A0S2MVD8	Bacillus_phage	4.4e-85	67.8
WP_025807795.1\|629942_630341_+	hypothetical protein	NA	NA	NA	NA
WP_025807797.1\|630439_630784_+	hypothetical protein	A0A0K2CZE4	Paenibacillus_phage	6.6e-10	55.8
WP_025807799.1\|630788_630998_+	hypothetical protein	NA	NA	NA	NA
WP_009330098.1\|630987_631200_-	hypothetical protein	NA	NA	NA	NA
WP_025807801.1\|631254_631473_+	hypothetical protein	NA	NA	NA	NA
WP_017475008.1\|631574_631793_+	hypothetical protein	NA	NA	NA	NA
WP_025807804.1\|631785_632664_+	replication protein	V9QKF6	Oenococcus_phage	4.7e-52	44.6
WP_025807806.1\|632647_633481_+	ATP-binding protein	Q2I8C8	Bacillus_phage	5.4e-34	37.0
WP_144581996.1\|633494_633653_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_025807808.1\|633804_634353_+	hypothetical protein	A0A0K2CNP4	Brevibacillus_phage	5.2e-09	43.3
WP_017474694.1\|634457_634607_+	BH0509 family protein	NA	NA	NA	NA
WP_017474644.1\|634677_634878_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	4.2e-09	50.9
WP_017474645.1\|634913_635147_+	hypothetical protein	NA	NA	NA	NA
WP_017474597.1\|635660_635909_+	hypothetical protein	NA	NA	NA	NA
WP_025808209.1\|636206_636647_+	ArpU family transcriptional regulator	S6AVV9	Thermus_phage	2.3e-36	51.1
WP_080627099.1\|636646_637189_+\|integrase	site-specific integrase	D2XR58	Bacillus_phage	3.3e-56	60.6
WP_025808178.1\|637418_638222_+	hypothetical protein	NA	NA	NA	NA
WP_048407332.1\|638562_638784_+	hypothetical protein	NA	NA	NA	NA
WP_026080869.1\|639019_639661_+	hypothetical protein	NA	NA	NA	NA
WP_080627100.1\|639820_640195_+	HNH endonuclease	Q38456	Bacillus_phage	4.4e-60	81.5
WP_009330377.1\|640576_641110_+\|terminase	phage terminase small subunit P27 family	Q9ZXG2	Bacillus_phage	2.8e-68	80.2
WP_009330378.1\|641109_642819_+\|terminase	terminase large subunit	D6R3Y4	Bacillus_phage	1.0e-300	87.3
WP_009330392.1\|643006_644251_+\|portal	phage portal protein	D6R3Y6	Bacillus_phage	1.4e-206	83.4
WP_025807960.1\|644240_644870_+\|head,protease	HK97 family phage prohead protease	Q9ZXF7	Bacillus_phage	6.0e-94	81.8
WP_017475036.1\|644910_646227_+\|capsid	phage major capsid protein	A0A0A7RTL2	Clostridium_phage	7.9e-96	50.0
WP_009329208.1\|646252_646702_+	collagen-like protein	D6R3Z0	Bacillus_phage	4.0e-15	53.3
WP_009329207.1\|646717_647068_+\|head,tail	phage gp6-like head-tail connector protein	Q9ZXF3	Bacillus_phage	1.3e-32	60.0
WP_069500677.1\|646997_647372_+\|head	phage head closure protein	Q9ZXF2	Bacillus_phage	2.4e-37	65.6
WP_069500676.1\|647364_647748_+	HK97 gp10 family phage protein	Q9ZXF1	Bacillus_phage	5.9e-44	69.3
WP_069500675.1\|647744_648125_+	DUF3168 domain-containing protein	Q9ZXF0	Bacillus_phage	1.8e-32	54.8
WP_009329203.1\|648124_648733_+\|tail	major tail protein	Q9ZXE9	Bacillus_phage	8.2e-56	54.6
WP_009329202.1\|648792_649128_+	hypothetical protein	Q9ZXE8	Bacillus_phage	5.0e-31	58.9
WP_025807965.1\|649325_653216_+\|tail	phage tail tape measure protein	D6R3Z8	Bacillus_phage	0.0e+00	62.7
WP_009330398.1\|653215_654052_+\|tail	phage tail family protein	D6R3Z9	Bacillus_phage	2.0e-113	71.8
WP_080626726.1\|654064_655774_+	alkaline phosphatase	D6R400	Bacillus_phage	1.9e-219	69.2
WP_069500673.1\|655810_657385_+	hypothetical protein	M4ZSB3	Bacillus_phage	1.1e-261	86.6
WP_069500672.1\|657421_658768_+\|plate	phage baseplate upper protein	M4ZRP1	Bacillus_phage	9.9e-86	86.3
WP_080626727.1\|658780_659104_+	bZIP transcription factor	M4ZR44	Bacillus_phage	7.8e-13	46.4
WP_080626728.1\|659100_659286_+	XkdX family protein	NA	NA	NA	NA
WP_069500916.1\|659348_659618_+	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	9.6e-25	61.8
WP_080626729.1\|659633_659897_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	2.7e-32	77.0
WP_080626730.1\|659948_660791_+	N-acetylmuramoyl-L-alanine amidase	S6BFI4	Thermus_phage	3.7e-46	54.3
663896:663913	attR	NA	NA	NA	NA

DBSCAN-SWA_2

734225 : 744149

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003179530.1\|734225_735521_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	5.9e-19	27.1
WP_061576038.1\|735595_736312_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	2.4e-46	42.4
WP_003179532.1\|736313_736568_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	8.0e-05	33.3
WP_003179533.1\|736564_737248_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_009329142.1\|737231_739460_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.2e-158	41.5
WP_003179536.1\|739435_740866_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.5e-52	32.9
WP_011197613.1\|740989_742030_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.7e-62	46.3
WP_080626734.1\|742026_742614_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-28	41.1
WP_003179539.1\|742610_744149_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.3e-77	52.0

DBSCAN-SWA_3

973933 : 980871

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080626760.1\|973933_974257_+	hypothetical protein	A0A0N9SHL8	Paenibacillus_phage	1.4e-06	35.7
WP_080626761.1\|974431_974767_+	hypothetical protein	NA	NA	NA	NA
WP_080626762.1\|974763_975009_+	hypothetical protein	NA	NA	NA	NA
WP_155761925.1\|975008_975182_+	hypothetical protein	NA	NA	NA	NA
WP_080626763.1\|975182_975509_+	hypothetical protein	R4JGJ3	Bacillus_phage	9.9e-08	36.1
WP_080626765.1\|975860_976244_+	hypothetical protein	A0A2H4J134	uncultured_Caudovirales_phage	6.0e-20	40.7
WP_080626766.1\|977016_977811_+	DNA replication protein	A0A0N7GFF0	Paenibacillus_phage	4.8e-64	52.3
WP_080626767.1\|977780_978281_+	hypothetical protein	NA	NA	NA	NA
WP_026588499.1\|978280_978484_+	hypothetical protein	NA	NA	NA	NA
WP_080626768.1\|978480_979830_+	AAA family ATPase	A0A2H4IZL9	uncultured_Caudovirales_phage	1.7e-125	52.6
WP_080626769.1\|979851_980871_+	DNA primase	A0A2H4J6E6	uncultured_Caudovirales_phage	9.5e-73	45.9

DBSCAN-SWA_4

984600 : 1075462

Bacillus_phage(43.75%)

holin,protease,terminase,tRNA,integrase,portal,tail,head,transposase,capsid

attL 1036711:1036726|attR 1075882:1075897

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017474282.1\|984600_985356_+	hypothetical protein	A0A0N9SJW5	Paenibacillus_phage	1.1e-52	49.8
WP_080626771.1\|985379_985811_+	hypothetical protein	A0A2H4IZM8	uncultured_Caudovirales_phage	8.8e-12	41.0
WP_080626772.1\|985851_986931_+	hypothetical protein	A0A2H4J459	uncultured_Caudovirales_phage	2.8e-14	36.5
WP_080626773.1\|987136_989434_+	DNA polymerase I	A0A2H4J6W7	uncultured_Caudovirales_phage	6.0e-123	37.5
WP_080626774.1\|989434_990484_+	hypothetical protein	A0A0N9SHN6	Paenibacillus_phage	2.2e-80	53.8
WP_048356262.1\|990483_990804_+	hypothetical protein	NA	NA	NA	NA
WP_157664248.1\|990800_991319_+	hypothetical protein	NA	NA	NA	NA
WP_080626776.1\|991324_991690_+	hypothetical protein	M4HNF9	Bacillus_phage	1.7e-11	38.1
WP_080626777.1\|991694_991952_+	hypothetical protein	NA	NA	NA	NA
WP_080626778.1\|991948_992143_+	hypothetical protein	NA	NA	NA	NA
WP_080626779.1\|992139_992340_+	hypothetical protein	NA	NA	NA	NA
WP_155761926.1\|992336_992486_+	hypothetical protein	NA	NA	NA	NA
WP_114555277.1\|992479_992842_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J6X7	uncultured_Caudovirales_phage	9.6e-28	55.0
WP_080626780.1\|992848_994948_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	R4JDX9	Bacillus_phage	0.0e+00	78.4
WP_006640508.1\|994979_995312_+	DUF1140 family protein	NA	NA	NA	NA
WP_075876064.1\|995350_996319_+	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	4.5e-149	80.3
WP_080626781.1\|996369_996951_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	D2XR49	Bacillus_phage	2.0e-43	55.1
WP_048354323.1\|996950_997178_+	hypothetical protein	A0A1P8CX04	Bacillus_phage	6.0e-20	78.2
WP_155761927.1\|997178_997349_+	hypothetical protein	NA	NA	NA	NA
WP_080626782.1\|997353_997911_+	hypothetical protein	A0A142F1S8	Bacillus_phage	8.7e-28	61.4
WP_080626783.1\|997926_998991_+	hypothetical protein	A0A1P8CWY7	Bacillus_phage	2.4e-34	51.9
WP_016885220.1\|998987_999548_+	hypothetical protein	A0A0N9SJZ0	Paenibacillus_phage	6.7e-36	46.4
WP_080626784.1\|999536_999923_-	hypothetical protein	A0A0N9SHP7	Paenibacillus_phage	2.0e-07	37.0
WP_080626785.1\|1000033_1001308_+	N-6 DNA methylase	A0A0N9ST12	Paenibacillus_phage	1.9e-150	65.3
WP_080626786.1\|1001307_1001697_+	DUF134 domain-containing protein	A0A0N9RZI0	Paenibacillus_phage	2.5e-18	43.3
WP_080626787.1\|1001689_1002178_+	hypothetical protein	NA	NA	NA	NA
WP_080626788.1\|1002266_1003067_+	hypothetical protein	A0A0N9S810	Paenibacillus_phage	7.0e-71	54.6
WP_080626789.1\|1003099_1003411_-	hypothetical protein	NA	NA	NA	NA
WP_080626790.1\|1003422_1004850_-	lipase	NA	NA	NA	NA
WP_017474209.1\|1004900_1005245_+	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_080626791.1\|1005381_1005600_+	helix-turn-helix transcriptional regulator	A0A1Z1DA26	Bacillus_phage	1.3e-08	43.1
WP_080626792.1\|1006585_1006864_+	hypothetical protein	NA	NA	NA	NA
WP_016885205.1\|1006853_1007228_+	hypothetical protein	NA	NA	NA	NA
WP_048407310.1\|1007220_1007769_+	hypothetical protein	NA	NA	NA	NA
WP_053075443.1\|1007769_1008159_+	HNH endonuclease	C7BGG5	Burkholderia_phage	9.4e-05	35.2
WP_080626793.1\|1008475_1008775_+	hypothetical protein	NA	NA	NA	NA
WP_080626794.1\|1009185_1009524_+	HNH endonuclease	A0A0K2CZH3	Paenibacillus_phage	1.3e-13	57.8
WP_011197905.1\|1009643_1009967_+\|terminase	P27 family phage terminase small subunit	A0A0K2CZN8	Paenibacillus_phage	6.8e-33	69.8
WP_080626795.1\|1009941_1011723_+\|terminase	terminase large subunit	A0A1B1P7R3	Bacillus_phage	1.9e-246	67.1
WP_073411216.1\|1011734_1013033_+\|portal	phage portal protein	A0A0U3SQF0	Bacillus_phage	4.3e-86	44.2
WP_069500356.1\|1012986_1013733_+\|protease	Clp protease ClpP	A0A0K2CYC6	Paenibacillus_phage	2.4e-57	49.6
WP_017474201.1\|1013732_1014887_+\|capsid	phage major capsid protein	A0A1B1P7R4	Bacillus_phage	4.9e-126	61.6
WP_026080791.1\|1014927_1015425_+	hypothetical protein	NA	NA	NA	NA
WP_017474199.1\|1015427_1015667_+\|head,tail	phage gp6-like head-tail connector protein	A0A0C5ABB4	Paenibacillus_phage	1.5e-08	40.5
WP_080626796.1\|1015671_1016007_+\|head	phage head closure protein	A0A2I7SC03	Paenibacillus_phage	1.1e-22	50.5
WP_080626797.1\|1016003_1016426_+	hypothetical protein	NA	NA	NA	NA
WP_011197913.1\|1016422_1016767_+	hypothetical protein	A0A0S2SY15	Bacillus_phage	1.0e-15	40.9
WP_011197914.1\|1016775_1017357_+\|tail	phage tail protein	NA	NA	NA	NA
WP_073411210.1\|1017307_1017622_+	fibronectin type III domain-containing protein	Q0PDK9	Bacillus_phage	2.1e-23	64.6
WP_011197916.1\|1017672_1018008_+	hypothetical protein	H0USX2	Bacillus_phage	1.2e-11	40.7
WP_080626798.1\|1018250_1023551_+\|tail	phage tail tape measure protein	A0A288WG88	Bacillus_phage	8.1e-99	42.6
WP_069500360.1\|1023551_1024373_+\|tail	phage tail family protein	A6M962	Geobacillus_virus	1.5e-65	48.5
WP_069500361.1\|1024382_1025909_+	hypothetical protein	A6M966	Geobacillus_virus	8.4e-49	36.3
WP_080627101.1\|1027427_1028000_+	hypothetical protein	A0A2I7S7J8	Vibrio_phage	1.3e-07	40.4
WP_080626799.1\|1029472_1029769_+	hypothetical protein	M4ZR44	Bacillus_phage	1.3e-17	50.0
WP_003181188.1\|1029769_1029964_+	XkdX family protein	NA	NA	NA	NA
WP_003181190.1\|1029967_1030231_+\|holin	holin	NA	NA	NA	NA
WP_080626800.1\|1030297_1031233_+	LysM peptidoglycan-binding domain-containing protein	Q9ZXD7	Bacillus_phage	9.6e-96	65.9
WP_011197925.1\|1031254_1031512_+\|holin	holin	A0A0U4JE55	Bacillus_phage	2.3e-20	52.9
WP_016885193.1\|1031955_1032222_-	hypothetical protein	NA	NA	NA	NA
WP_161658333.1\|1032242_1033376_-	glycosyltransferase	NA	NA	NA	NA
WP_016885191.1\|1033820_1034036_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_069500365.1\|1034195_1035014_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069500366.1\|1035086_1035416_+	YolD-like family protein	O64030	Bacillus_phage	2.2e-07	34.6
1036711:1036726	attL	NA	NA	NA	NA
WP_003179971.1\|1038220_1038430_-	hypothetical protein	NA	NA	NA	NA
WP_003179974.1\|1039632_1039848_+	hypothetical protein	D6R3Y4	Bacillus_phage	7.9e-22	73.5
WP_011201594.1\|1039841_1040192_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4J4U2	uncultured_Caudovirales_phage	4.8e-08	57.1
WP_069500368.1\|1040250_1040589_-	hypothetical protein	NA	NA	NA	NA
WP_003179977.1\|1040614_1042339_-\|transposase	transposase	A0A1L2JY53	Aeribacillus_phage	8.4e-05	33.6
WP_100224395.1\|1042613_1042901_+	DUF3800 domain-containing protein	Q71TB8	Escherichia_phage	6.4e-19	47.8
WP_009329006.1\|1043131_1043572_-	hypothetical protein	NA	NA	NA	NA
WP_071583540.1\|1048931_1050257_+	TGS domain-containing protein	NA	NA	NA	NA
WP_003179982.1\|1050503_1050722_+	hypothetical protein	NA	NA	NA	NA
WP_003179983.1\|1051109_1051874_+	type I 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_017474999.1\|1052279_1054055_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_025807987.1\|1054257_1055025_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-30	37.6
WP_087634947.1\|1055021_1056035_+	aliphatic sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003179993.1\|1056031_1056868_+	ABC transporter permease	NA	NA	NA	NA
WP_003179995.1\|1056881_1058012_+	FMNH2-dependent alkanesulfonate monooxygenase	NA	NA	NA	NA
WP_071583541.1\|1058042_1058501_-	hypothetical protein	NA	NA	NA	NA
WP_003179999.1\|1058497_1058704_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003180000.1\|1059253_1059466_+	hypothetical protein	NA	NA	NA	NA
WP_003180002.1\|1059573_1060320_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	3.2e-09	23.8
WP_080626803.1\|1060285_1061755_+	hypothetical protein	NA	NA	NA	NA
WP_026699457.1\|1061744_1062653_+	PqqD family protein	NA	NA	NA	NA
WP_011197680.1\|1062649_1062934_+	hypothetical protein	NA	NA	NA	NA
WP_003180010.1\|1063041_1063311_+	30S ribosomal protein S14	NA	NA	NA	NA
WP_009328997.1\|1063635_1064265_-	hypothetical protein	NA	NA	NA	NA
WP_071583959.1\|1064345_1065494_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_009328996.1\|1065557_1066463_+	amidase domain-containing protein	NA	NA	NA	NA
WP_085959525.1\|1066497_1066980_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_003180021.1\|1067071_1067686_+	YhbD family protein	NA	NA	NA	NA
WP_003180023.1\|1067700_1068411_+	hypothetical protein	NA	NA	NA	NA
WP_003180026.1\|1068425_1069127_+	hypothetical protein	NA	NA	NA	NA
WP_009328994.1\|1069527_1071423_+	serine/threonine protein kinase PrkA	A0MN77	Thermus_phage	3.3e-103	36.6
WP_080626804.1\|1072504_1074097_-	recombinase family protein	I3VYZ3	Thermoanaerobacterium_phage	2.6e-32	24.5
WP_150194401.1\|1074267_1074456_-	hypothetical protein	NA	NA	NA	NA
WP_080626805.1\|1074577_1075462_-\|integrase	tyrosine-type recombinase/integrase	A0A0E3M2X0	Bacillus_phage	2.7e-55	40.1
1075882:1075897	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1091795 : 1149839

Bacillus_phage(86.27%)

tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080626823.1\|1091795_1092035_+	DUF3850 domain-containing protein	C9E2N9	Enterococcus_phage	1.7e-17	58.9
WP_080626824.1\|1092056_1092245_+	hypothetical protein	NA	NA	NA	NA
WP_080626825.1\|1092348_1092561_+	hypothetical protein	U5PTT2	Bacillus_phage	3.6e-11	60.0
WP_080626826.1\|1092557_1092878_+	hypothetical protein	NA	NA	NA	NA
WP_087634952.1\|1092867_1093227_+	hypothetical protein	NA	NA	NA	NA
WP_087634953.1\|1093322_1093997_+	poly-gamma-glutamate hydrolase family protein	O64134	Bacillus_phage	2.8e-41	49.3
WP_157664254.1\|1093971_1094172_+	hypothetical protein	O64134	Bacillus_phage	4.2e-09	57.4
WP_080626827.1\|1094171_1095926_+	right-handed parallel beta-helix repeat-containing protein	F8WPS8	Bacillus_phage	4.5e-123	43.4
WP_155761929.1\|1096144_1096297_+	hypothetical protein	NA	NA	NA	NA
WP_080626829.1\|1096348_1096576_+	hypothetical protein	NA	NA	NA	NA
WP_080626830.1\|1096801_1097548_+	DUF3603 family protein	A0A109ZRE1	Bacillus_phage	3.5e-32	34.9
WP_087634999.1\|1097570_1097963_+	dCMP deaminase family protein	F8WPT6	Bacillus_phage	2.8e-49	72.8
WP_157664255.1\|1097946_1098216_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	S5MA41	Brevibacillus_phage	4.5e-06	38.8
WP_071583448.1\|1098339_1098573_+	hypothetical protein	NA	NA	NA	NA
WP_080626833.1\|1098575_1098773_+	hypothetical protein	NA	NA	NA	NA
WP_071583450.1\|1098958_1099360_+	hypothetical protein	NA	NA	NA	NA
WP_080626834.1\|1099356_1099668_+	hypothetical protein	NA	NA	NA	NA
WP_080626835.1\|1099767_1100550_+	hypothetical protein	A0A0E3T6A0	Bacillus_phage	2.8e-32	35.3
WP_080626836.1\|1100559_1101048_+	hypothetical protein	NA	NA	NA	NA
WP_080626837.1\|1101022_1101724_+	hypothetical protein	A0A0E3X9H9	Bacillus_phage	1.5e-37	38.6
WP_080626838.1\|1101737_1102235_+	hypothetical protein	A0A1L2JY27	Aeribacillus_phage	1.3e-30	51.2
WP_080626839.1\|1102333_1102978_+	hypothetical protein	A0A1D6X8E5	Bacillus_phage	5.2e-08	39.3
WP_080626840.1\|1103106_1103385_+	hypothetical protein	U5PY47	Bacillus_phage	8.7e-13	50.0
WP_080626841.1\|1103384_1103942_+	hypothetical protein	NA	NA	NA	NA
WP_080626842.1\|1103964_1104738_+	hypothetical protein	U5Q178	Bacillus_phage	3.4e-70	50.2
WP_080626843.1\|1104799_1105102_-	hypothetical protein	NA	NA	NA	NA
WP_071583460.1\|1105580_1106258_+	hypothetical protein	A0A1D6X837	Bacillus_phage	1.5e-21	33.3
WP_080626844.1\|1106257_1107844_+	hypothetical protein	S5MLT2	Bacillus_phage	1.2e-93	36.7
WP_080626845.1\|1107936_1109295_+	hypothetical protein	A0A0E3JT25	Bacillus_phage	1.4e-148	58.9
WP_080626846.1\|1109311_1110361_+	hypothetical protein	A0A1D6X836	Bacillus_phage	1.2e-59	41.6
WP_071583464.1\|1110381_1110801_+	hypothetical protein	U5PXS9	Bacillus_phage	1.6e-29	56.9
WP_080626847.1\|1110830_1111760_+	hypothetical protein	A0A0E3X9I2	Bacillus_phage	3.6e-95	58.7
WP_071583466.1\|1111832_1112231_+	hypothetical protein	A0A0E3T6A9	Bacillus_phage	1.3e-14	40.5
WP_142396724.1\|1112293_1112596_+	hypothetical protein	A0A0E3T7L9	Bacillus_phage	2.2e-25	58.2
WP_155761930.1\|1112595_1112757_+	hypothetical protein	U5Q1C8	Bacillus_phage	1.0e-05	58.7
WP_142396723.1\|1112772_1113279_+	hypothetical protein	U5PWF3	Bacillus_phage	4.4e-63	74.4
WP_071583469.1\|1113307_1113553_+	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_080626850.1\|1113620_1114340_+	hypothetical protein	A0A1D6X862	Bacillus_phage	2.3e-28	36.0
WP_080626851.1\|1114358_1114829_+	hypothetical protein	U5Q195	Bacillus_phage	4.0e-42	59.5
WP_080626852.1\|1115091_1115544_+	hypothetical protein	U5PWN1	Bacillus_phage	1.2e-27	42.6
WP_080626853.1\|1115536_1116034_+	hypothetical protein	NA	NA	NA	NA
WP_080626854.1\|1116039_1116504_+	hypothetical protein	S5MLT8	Bacillus_phage	2.9e-29	41.1
WP_080626855.1\|1116516_1122477_+\|tail	phage tail tape measure protein	A0A0E3M0Y3	Bacillus_phage	5.7e-08	56.4
WP_080626856.1\|1122476_1122839_+	hypothetical protein	A0A0E3T7M6	Bacillus_phage	2.6e-33	55.4
WP_080626857.1\|1122855_1126965_+	hypothetical protein	A0A1D6X857	Bacillus_phage	9.3e-143	45.4
WP_080626858.1\|1126984_1129387_+	hypothetical protein	R4JGT1	Bacillus_phage	1.1e-159	47.1
WP_080626859.1\|1129407_1129947_+	hypothetical protein	A0A1L2JY73	Aeribacillus_phage	2.8e-07	42.0
WP_080626860.1\|1129968_1130433_+	hypothetical protein	A0A0H3UZD0	Geobacillus_virus	1.0e-29	47.0
WP_080626861.1\|1130532_1130835_+	hypothetical protein	NA	NA	NA	NA
WP_080626862.1\|1130862_1131942_+	LysM peptidoglycan-binding domain-containing protein	O64040	Bacillus_phage	2.9e-19	68.7
WP_080626863.1\|1131954_1132239_+\|holin	phage holin	J7KDR1	Streptococcus_phage	6.6e-08	42.2
WP_080626864.1\|1132313_1132679_+	hypothetical protein	NA	NA	NA	NA
WP_080626865.1\|1132737_1133256_+	hypothetical protein	NA	NA	NA	NA
WP_080626866.1\|1133266_1133818_-	hypothetical protein	U5Q1A7	Bacillus_phage	6.2e-26	41.1
WP_080626867.1\|1133814_1134663_-	thymidylate synthase	A0A1P8CX42	Bacillus_phage	3.3e-79	52.1
WP_080626868.1\|1134649_1135165_-	dihydrofolate reductase	A0A076GDN3	Bacillus_phage	7.0e-24	41.3
WP_080626869.1\|1135175_1135907_-	PD-(D/E)XK nuclease family protein	S5M851	Bacillus_phage	7.1e-54	40.4
WP_080626870.1\|1135906_1136533_-	3'-5' exonuclease	A0A0N9SJX9	Paenibacillus_phage	9.1e-26	37.8
WP_071583484.1\|1136560_1136743_-	hypothetical protein	NA	NA	NA	NA
WP_080626871.1\|1136758_1137769_-	toprim domain-containing protein	S5M855	Bacillus_phage	2.8e-85	48.7
WP_071583486.1\|1137771_1137951_-	hypothetical protein	NA	NA	NA	NA
WP_080626872.1\|1138006_1139347_-	hypothetical protein	A0A1D6X893	Bacillus_phage	5.9e-123	53.1
WP_080626873.1\|1139339_1139879_-	AAA family ATPase	A0A0E3X9J6	Bacillus_phage	2.5e-32	45.6
WP_157664259.1\|1139908_1140601_-	sigma-70 family RNA polymerase sigma factor	U5Q0I1	Bacillus_phage	7.2e-32	38.9
WP_080626875.1\|1140669_1140882_-	hypothetical protein	NA	NA	NA	NA
WP_080626876.1\|1140874_1141261_-	hypothetical protein	NA	NA	NA	NA
WP_080626877.1\|1141333_1141618_-	hypothetical protein	NA	NA	NA	NA
WP_080626878.1\|1141682_1142126_-	hypothetical protein	S5MLV8	Bacillus_phage	9.0e-28	49.0
WP_080626879.1\|1142184_1142853_-	AAA family ATPase	F8WPX9	Bacillus_phage	3.5e-39	47.1
WP_080626880.1\|1142883_1143429_-	hypothetical protein	NA	NA	NA	NA
WP_080626881.1\|1143452_1143992_-	hypothetical protein	NA	NA	NA	NA
WP_080626882.1\|1144021_1145023_-	AAA family ATPase	A0A0E3T6D1	Bacillus_phage	9.7e-70	47.5
WP_080626883.1\|1145012_1145270_-	hypothetical protein	NA	NA	NA	NA
WP_080626884.1\|1145333_1146284_-	hypothetical protein	A0A1D6X8A5	Bacillus_phage	1.9e-51	43.4
WP_080626885.1\|1146392_1147433_-	ribonucleotide-diphosphate reductase subunit beta	A0A0E3JQ77	Bacillus_phage	9.9e-134	67.4
WP_080626886.1\|1147508_1149839_-	ribonucleoside-diphosphate reductase subunit alpha	A0A0E3M3E9	Bacillus_phage	3.2e-257	57.6

DBSCAN-SWA_6

1474059 : 1541323

Bacillus_phage(27.78%)

terminase,portal,coat,tail,plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009328811.1\|1474059_1474509_-\|coat	spore coat protein	NA	NA	NA	NA
WP_011197778.1\|1474659_1475148_-\|coat	spore coat protein	NA	NA	NA	NA
WP_009328809.1\|1475279_1475792_-\|coat	spore coat protein	NA	NA	NA	NA
WP_009328808.1\|1475862_1476261_-	hypothetical protein	NA	NA	NA	NA
WP_009328807.1\|1476309_1476696_-\|coat	spore coat protein	NA	NA	NA	NA
WP_011197779.1\|1476842_1477199_+	DUF1360 domain-containing protein	NA	NA	NA	NA
WP_009328806.1\|1477485_1477695_+	hypothetical protein	NA	NA	NA	NA
WP_011197781.1\|1477774_1477906_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_009328805.1\|1478035_1478293_+	sporulation protein	NA	NA	NA	NA
WP_011197782.1\|1478331_1480614_-	ATP-dependent helicase	A0A068EQC7	Bacillus_phage	1.0e-90	35.6
WP_016885900.1\|1480735_1480993_+	hypothetical protein	NA	NA	NA	NA
WP_009328801.1\|1481032_1481620_-	DedA family protein	NA	NA	NA	NA
WP_161620988.1\|1482697_1483594_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.2e-84	55.6
WP_011197785.1\|1483610_1484006_-	GtrA family protein	NA	NA	NA	NA
WP_009328797.1\|1484170_1484590_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_009328796.1\|1484599_1485109_-	hypothetical protein	NA	NA	NA	NA
WP_009328793.1\|1485173_1485896_-	esterase family protein	NA	NA	NA	NA
WP_011197786.1\|1485886_1486219_-	hypothetical protein	NA	NA	NA	NA
WP_011197787.1\|1486412_1486901_-	DNA damage-inducible protein DinB	NA	NA	NA	NA
WP_009328787.1\|1486981_1487929_-	YafY family transcriptional regulator	NA	NA	NA	NA
WP_009328785.1\|1488237_1489362_+	methionine biosynthesis PLP-dependent protein	A0A0B5JD48	Pandoravirus	5.3e-16	25.6
WP_011197788.1\|1489351_1490527_+	cystathionine beta-lyase	A0A0B5JD48	Pandoravirus	6.7e-22	29.3
WP_011197789.1\|1490572_1491763_-	DUF819 domain-containing protein	NA	NA	NA	NA
WP_011197790.1\|1491936_1492506_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_009328774.1\|1492495_1492780_+	hypothetical protein	NA	NA	NA	NA
WP_017474216.1\|1492955_1494329_+	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	3.8e-08	23.9
WP_080626900.1\|1494633_1495620_-	family 43 glycosylhydrolase	NA	NA	NA	NA
WP_016885898.1\|1496221_1496305_-	hypothetical protein	NA	NA	NA	NA
WP_061565996.1\|1496743_1496923_+	hypothetical protein	NA	NA	NA	NA
WP_017474214.1\|1496956_1497535_+	maltose O-acetyltransferase	NA	NA	NA	NA
WP_017474213.1\|1497621_1497909_-	hypothetical protein	NA	NA	NA	NA
WP_017474212.1\|1498116_1499007_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011197796.1\|1499327_1501157_+	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA
WP_080626901.1\|1501184_1502903_+	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA
WP_003180765.1\|1502960_1503848_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003180767.1\|1503939_1504812_+	DMT family transporter	NA	NA	NA	NA
WP_003180768.1\|1504859_1505237_+	glyoxalase	NA	NA	NA	NA
WP_009328757.1\|1505280_1505829_-	hypothetical protein	NA	NA	NA	NA
WP_003180772.1\|1506281_1507016_+	LysM peptidoglycan-binding domain-containing protein	A0A217ER34	Bacillus_phage	4.2e-30	60.8
WP_011197798.1\|1507071_1508496_-	DHA2 family efflux MFS transporter permease subunit	A0A0M3UL24	Mycobacterium_phage	5.1e-16	24.6
WP_075223542.1\|1508511_1509090_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_075223543.1\|1509102_1509438_-	hypothetical protein	NA	NA	NA	NA
WP_003180779.1\|1509466_1509880_-	hypothetical protein	NA	NA	NA	NA
WP_003180781.1\|1510254_1510737_-	DUF600 family protein	NA	NA	NA	NA
WP_003180784.1\|1513007_1513655_+	poly-gamma-glutamate hydrolase family protein	A0A0Y0AJU6	Bacillus_phage	4.1e-45	47.5
WP_003180785.1\|1513668_1514325_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	4.0e-40	49.7
WP_003180787.1\|1514513_1514867_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	2.7e-19	49.6
WP_003180788.1\|1515039_1515300_+	helix-turn-helix transcriptional regulator	S5MA07	Brevibacillus_phage	7.9e-08	41.2
WP_003180790.1\|1515289_1515586_+	hypothetical protein	NA	NA	NA	NA
WP_080624211.1\|1515586_1516417_+\|portal	phage portal protein	S6BFM4	Thermus_phage	1.3e-27	31.0
WP_035317447.1\|1516316_1517117_+	ATP-binding protein	A6XMI1	Bacillus_virus	6.1e-59	48.1
WP_003180798.1\|1517387_1517729_+	hypothetical protein	NA	NA	NA	NA
WP_003180800.1\|1517725_1517929_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	1.9e-12	54.7
WP_003180803.1\|1518049_1518553_+	sigma-70 family RNA polymerase sigma factor	A0A0K2CNQ1	Brevibacillus_phage	1.4e-21	38.7
WP_003180804.1\|1518695_1519496_+\|terminase	terminase	A0A0S2MVB6	Bacillus_phage	5.7e-65	51.4
WP_009328741.1\|1519492_1520791_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	7.2e-150	60.2
WP_003180808.1\|1520794_1522309_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	3.4e-143	55.5
WP_009328740.1\|1522316_1523165_+\|portal	phage portal protein	A0A1B1P7E4	Bacillus_phage	2.1e-57	62.8
WP_009328739.1\|1523182_1524118_+\|portal	phage portal protein	A0A1B1P7E3	Bacillus_phage	1.1e-102	64.1
WP_011201613.1\|1524205_1524586_+	DUF3199 family protein	NA	NA	NA	NA
WP_009328738.1\|1524582_1524939_+	YqbH/XkdH family protein	NA	NA	NA	NA
WP_080626902.1\|1524935_1525424_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	3.8e-35	45.2
WP_003180824.1\|1525436_1525877_+	hypothetical protein	NA	NA	NA	NA
WP_003180826.1\|1525877_1526102_+	hypothetical protein	NA	NA	NA	NA
WP_011197804.1\|1526101_1527448_+\|portal	phage portal protein	S5MNC1	Brevibacillus_phage	1.5e-78	40.2
WP_003180830.1\|1527449_1527893_+\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	2.1e-24	44.7
WP_003180832.1\|1528075_1528525_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	4.1e-12	38.7
WP_003180833.1\|1528566_1528704_+	hypothetical protein	NA	NA	NA	NA
WP_080626903.1\|1528707_1532490_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	1.7e-42	45.3
WP_003180838.1\|1532482_1533139_+	LysM peptidoglycan-binding domain-containing protein	A0A090DBR9	Clostridium_phage	4.0e-24	32.6
WP_009328734.1\|1533195_1534176_+	hypothetical protein	H7BV96	unidentified_phage	9.2e-41	32.3
WP_003180843.1\|1534172_1534481_+	DUF2577 domain-containing protein	S6C459	Thermus_phage	1.0e-06	37.3
WP_003180844.1\|1534499_1534925_+	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	5.4e-14	39.0
WP_009328732.1\|1534917_1535961_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	9.7e-73	44.3
WP_009328731.1\|1535947_1536868_+	YmfQ family protein	A0A0A7RTT8	Clostridium_phage	5.0e-12	28.3
WP_003180850.1\|1536881_1537268_+	hypothetical protein	NA	NA	NA	NA
WP_003180851.1\|1537283_1538489_+	hypothetical protein	A0A2H4J4R1	uncultured_Caudovirales_phage	9.3e-27	48.3
WP_003180853.1\|1538526_1539558_+	hypothetical protein	A0A1P8CWR7	Bacillus_phage	1.0e-18	48.2
WP_003180856.1\|1539660_1539930_+	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	1.6e-24	64.0
WP_003180859.1\|1539944_1540208_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	5.3e-28	67.8
WP_003180861.1\|1540258_1541323_+	N-acetylmuramoyl-L-alanine amidase	S6BFI4	Thermus_phage	1.1e-44	50.8

DBSCAN-SWA_7

2542240 : 2554420

Staphylococcus_phage(55.56%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080626939.1\|2542240_2542834_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.0e-14	37.6
WP_009327962.1\|2542823_2543579_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.4e-07	23.6
WP_003183108.1\|2543761_2543857_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_003183111.1\|2543977_2544499_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003183113.1\|2544509_2544884_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003183115.1\|2544985_2545450_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-45	70.7
WP_003183117.1\|2545484_2546681_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.1e-116	53.9
WP_003183118.1\|2546702_2547350_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	7.4e-39	41.5
WP_003183120.1\|2547361_2548450_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	6.6e-64	38.1
WP_003183123.1\|2548810_2549155_-	hypothetical protein	NA	NA	NA	NA
WP_003183125.1\|2549417_2551604_-	AAA family ATPase	A0A220BYT7	Staphylococcus_phage	1.4e-150	41.3
WP_003183127.1\|2551730_2552168_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_003183128.1\|2552326_2552632_-	hypothetical protein	NA	NA	NA	NA
WP_009327959.1\|2552621_2553752_-	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	1.4e-77	43.3
WP_080626940.1\|2553982_2554420_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	3.2e-17	43.3

DBSCAN-SWA_8

2945931 : 3039383

105

Bacillus_phage(78.43%)

head,tRNA,protease,terminase,portal,coat,tail,capsid,plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003183980.1\|2945931_2947077_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.5e-85	43.2
WP_069500660.1\|2947105_2948134_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003183984.1\|2948174_2948375_-	DUF2905 domain-containing protein	NA	NA	NA	NA
WP_003183985.1\|2948367_2949372_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.2e-06	30.3
WP_003183986.1\|2949381_2949987_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_003183987.1\|2950109_2950631_-	intercompartmental signaling factor BofC	NA	NA	NA	NA
WP_003183988.1\|2950873_2951524_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_003183990.1\|2951801_2951981_-	small acid-soluble spore protein H	NA	NA	NA	NA
WP_003183991.1\|2952076_2952541_-	DNA damage-inducible protein DinB	NA	NA	NA	NA
WP_003183992.1\|2952601_2953312_-	poly-gamma-glutamate hydrolase family protein	F8WQ53	Bacillus_phage	3.0e-49	55.9
WP_003183993.1\|2953725_2953905_+	hypothetical protein	A0A1P8CWV7	Bacillus_phage	1.5e-21	76.3
WP_003183994.1\|2953996_2954323_-	hypothetical protein	NA	NA	NA	NA
WP_003183995.1\|2954464_2955187_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_080626953.1\|2956859_2957495_-	sporulation protein	NA	NA	NA	NA
WP_003184005.1\|2957666_2958719_-\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA
WP_003184007.1\|2958834_2959944_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_009327769.1\|2959965_2960805_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_003184010.1\|2960785_2962360_-	L-aspartate oxidase	NA	NA	NA	NA
WP_009327768.1\|2962460_2963639_+	aminotransferase class V-fold PLP-dependent enzyme	A0A1X7QGF3	Faustovirus	1.2e-31	25.3
WP_003184015.1\|2963607_2964150_+	transcription repressor NadR	NA	NA	NA	NA
WP_003184017.1\|2964193_2965063_-	prephenate dehydratase	NA	NA	NA	NA
WP_003184018.1\|2965071_2965515_-	ACT domain-containing protein	NA	NA	NA	NA
WP_080626954.1\|2965628_2966915_-	GTPase ObgE	NA	NA	NA	NA
WP_003184022.1\|2966947_2967526_-	sporulation protein	NA	NA	NA	NA
WP_003184023.1\|2967751_2968033_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_003184025.1\|2968045_2968387_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003184027.1\|2968399_2968708_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_003184028.1\|2968864_2969731_-	stage IV sporulation protein FB	NA	NA	NA	NA
WP_003184030.1\|2969723_2970515_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_003184032.1\|2970660_2971089_+	SRPBCC domain-containing protein	NA	NA	NA	NA
WP_061578553.1\|2971088_2971409_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003184035.1\|2971453_2972260_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_011198163.1\|2972262_2972943_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_003184039.1\|2972997_2973516_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_003184040.1\|2973512_2974421_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003184042.1\|2974451_2975462_-	rod shape-determining protein	NA	NA	NA	NA
WP_162785922.1\|2976061_2976253_+	hypothetical protein	NA	NA	NA	NA
WP_162785923.1\|2976224_2976647_+	hypothetical protein	NA	NA	NA	NA
WP_080626956.1\|2976745_2977114_+	YolD-like family protein	O64030	Bacillus_phage	2.0e-17	40.4
WP_035338316.1\|2977336_2978458_-	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	2.4e-53	35.1
WP_025807654.1\|2978710_2980327_+	ribonuclease YeeF family protein	NA	NA	NA	NA
WP_006637262.1\|2980339_2980756_+	hypothetical protein	A0A2H4J4V0	uncultured_Caudovirales_phage	3.6e-26	44.1
WP_080626957.1\|2980786_2981740_-	LysM peptidoglycan-binding domain-containing protein	A0A141HSE6	Bacillus_phage	1.2e-61	42.0
WP_069500507.1\|2981787_2982051_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	7.9e-32	77.0
WP_069500916.1\|2982066_2982336_-	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	9.6e-25	61.8
WP_039072971.1\|2982399_2982582_-	XkdX family protein	A0EWM9	Staphylococcus_virus	1.8e-06	47.9
WP_069500506.1\|2982578_2982902_-	hypothetical protein	Q9ZXE0	Bacillus_phage	5.8e-08	37.9
WP_080626958.1\|2982914_2984354_-\|plate	phage baseplate upper protein	M4ZRP1	Bacillus_phage	9.4e-58	40.5
WP_080626959.1\|2984392_2985946_-	hypothetical protein	M4ZSB3	Bacillus_phage	7.3e-234	77.2
WP_080626960.1\|2985982_2987692_-	alkaline phosphatase	D6R400	Bacillus_phage	3.6e-218	69.1
WP_017475032.1\|2987704_2988541_-\|tail	phage tail family protein	D6R3Z9	Bacillus_phage	1.4e-114	72.2
WP_080626961.1\|2988540_2992431_-\|tail	phage tail tape measure protein	D6R3Z8	Bacillus_phage	0.0e+00	65.1
WP_009329202.1\|2992628_2992964_-	hypothetical protein	Q9ZXE8	Bacillus_phage	5.0e-31	58.9
WP_080626962.1\|2993024_2993633_-\|tail	phage tail protein	Q9ZXE9	Bacillus_phage	1.4e-55	54.6
WP_009329204.1\|2993632_2994013_-	DUF3168 domain-containing protein	Q9ZXF0	Bacillus_phage	3.0e-32	55.6
WP_009329205.1\|2994009_2994393_-	HK97 gp10 family phage protein	Q9ZXF1	Bacillus_phage	4.1e-45	70.9
WP_009329206.1\|2994385_2994760_-\|head	phage head closure protein	Q9ZXF2	Bacillus_phage	1.2e-36	63.9
WP_080626963.1\|2994689_2995040_-\|head,tail	phage gp6-like head-tail connector protein	Q9ZXF3	Bacillus_phage	2.8e-32	59.1
WP_009329208.1\|2995055_2995505_-	collagen-like protein	D6R3Z0	Bacillus_phage	4.0e-15	53.3
WP_017475036.1\|2995530_2996847_-\|capsid	phage major capsid protein	A0A0A7RTL2	Clostridium_phage	7.9e-96	50.0
WP_025807960.1\|2996887_2997517_-\|head,protease	HK97 family phage prohead protease	Q9ZXF7	Bacillus_phage	6.0e-94	81.8
WP_009330396.1\|2997506_2998751_-\|portal	phage portal protein	D6R3Y6	Bacillus_phage	6.1e-207	83.4
WP_009330378.1\|2998938_3000648_-\|terminase	terminase large subunit	D6R3Y4	Bacillus_phage	1.0e-300	87.3
WP_017475038.1\|3000647_3001181_-\|terminase	phage terminase small subunit P27 family	Q9ZXG2	Bacillus_phage	2.8e-68	80.2
WP_087634980.1\|3001562_3001937_-	HNH endonuclease	Q38456	Bacillus_phage	5.8e-60	80.6
WP_017475040.1\|3002096_3002741_-	hypothetical protein	NA	NA	NA	NA
WP_003185368.1\|3002959_3003184_-\|coat	spore coat protein	NA	NA	NA	NA
WP_009329244.1\|3003933_3004314_-	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	8.8e-48	82.9
WP_025807623.1\|3004426_3004804_-	hypothetical protein	R4JMS5	Bacillus_phage	4.3e-31	57.9
WP_009329249.1\|3004819_3005335_-	hypothetical protein	D6R425	Bacillus_phage	1.1e-82	83.6
WP_017695850.1\|3005338_3005509_-	Fur-regulated basic protein FbpA	A0A0S2SXY0	Bacillus_phage	5.1e-08	56.6
WP_017474566.1\|3005505_3006045_-	nuclease	Q9ZXC2	Bacillus_phage	1.1e-88	89.9
WP_080626964.1\|3006041_3006479_-	hypothetical protein	Q9ZXC3	Bacillus_phage	1.5e-62	75.9
WP_080626965.1\|3006456_3006828_-	hypothetical protein	NA	NA	NA	NA
WP_080626966.1\|3007049_3009482_-	DNA primase	D6R422	Bacillus_phage	0.0e+00	80.0
WP_017474381.1\|3009542_3009983_-	DUF669 domain-containing protein	Q9ZXC5	Bacillus_phage	2.9e-71	89.0
WP_017474382.1\|3010001_3010355_-	hypothetical protein	Q9ZXC6	Bacillus_phage	3.9e-26	56.6
WP_080626967.1\|3010344_3011280_-	AAA family ATPase	Q9ZXC7	Bacillus_phage	3.2e-160	91.0
WP_057957666.1\|3011283_3011841_-	hypothetical protein	Q9ZXC8	Bacillus_phage	2.4e-70	71.4
WP_069500681.1\|3012034_3012304_-	hypothetical protein	Q9ZXC9	Bacillus_phage	9.0e-23	55.8
WP_048355993.1\|3012300_3012492_-	hypothetical protein	NA	NA	NA	NA
WP_080626968.1\|3012642_3012882_-	helix-turn-helix transcriptional regulator	D6R414	Bacillus_phage	3.3e-16	62.0
WP_048355991.1\|3013131_3013575_+	helix-turn-helix transcriptional regulator	Q786F1	Bacillus_phage	4.9e-42	63.9
WP_048355990.1\|3013606_3014086_+	ImmA/IrrE family metallo-endopeptidase	Q9T201	Bacillus_phage	1.3e-43	59.9
WP_080626969.1\|3014125_3015514_+	recombinase family protein	Q9T200	Bacillus_phage	6.9e-159	60.5
WP_009329283.1\|3015526_3015913_-	DNA repair protein RadC	NA	NA	NA	NA
WP_003184048.1\|3015967_3016540_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_003184050.1\|3016693_3017725_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_003184052.1\|3017928_3018678_-	prepilin peptidase	NA	NA	NA	NA
WP_003184054.1\|3018820_3020125_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_003184055.1\|3020200_3022843_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	2.8e-161	42.3
WP_003184058.1\|3023304_3023496_+	hypothetical protein	NA	NA	NA	NA
WP_016885545.1\|3023515_3024538_-\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_063906779.1\|3024565_3026023_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_009329296.1\|3026171_3027467_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_009329298.1\|3027492_3028467_-	porphobilinogen synthase	NA	NA	NA	NA
WP_080626970.1\|3028470_3029262_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_009329302.1\|3029251_3030193_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_011198166.1\|3030232_3031063_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_009329306.1\|3031068_3032430_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_003184074.1\|3032618_3033104_+	hypothetical protein	NA	NA	NA	NA
WP_003184076.1\|3033152_3033740_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_080626971.1\|3033736_3036061_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	7.7e-187	45.2
WP_080626972.1\|3036279_3037935_-\|protease	ATP-dependent protease LonB	A0A0R6PGP8	Moraxella_phage	1.4e-17	35.7
WP_003184083.1\|3038117_3039383_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.2e-147	63.5

DBSCAN-SWA_9

3381688 : 3421237

Bacillus_phage(63.89%)

plate,protease,terminase,integrase,portal,coat,tail,capsid,head,transposase,holin

attL 3379389:3379448|attR 3421330:3421405

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3379389:3379448	attL	NA	NA	NA	NA
WP_087635001.1\|3381688_3382123_+	DUF4231 domain-containing protein	A0A0S2MYH2	Enterococcus_phage	3.4e-27	47.9
WP_080627000.1\|3382119_3382524_+	TIR domain-containing protein	NA	NA	NA	NA
WP_080627001.1\|3382525_3382723_-	hypothetical protein	Q4ZA73	Staphylococcus_virus	3.9e-15	65.0
WP_080627002.1\|3383019_3384519_+\|transposase	transposase	NA	NA	NA	NA
WP_080627003.1\|3384533_3384932_+	hypothetical protein	NA	NA	NA	NA
WP_080627004.1\|3384977_3386057_-	N-acetylmuramoyl-L-alanine amidase	S6BFI4	Thermus_phage	5.2e-45	53.0
WP_080627005.1\|3386108_3386372_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	2.3e-31	75.9
WP_071583811.1\|3386387_3386657_-	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	3.3e-25	62.9
WP_080627006.1\|3386719_3386902_-	XkdX family protein	A0EWM9	Staphylococcus_virus	1.8e-06	47.9
WP_080627007.1\|3386898_3387222_-	hypothetical protein	M4ZR44	Bacillus_phage	2.0e-13	47.4
WP_080627106.1\|3387234_3388581_-\|plate	BppU family phage baseplate upper protein	D6R402	Bacillus_phage	1.9e-65	42.3
WP_080627008.1\|3388597_3391243_-	peptidase G2	D6R401	Bacillus_phage	1.4e-293	57.0
WP_080627009.1\|3391279_3392992_-	alkaline phosphatase	D6R400	Bacillus_phage	1.2e-216	65.6
WP_080627010.1\|3393004_3393841_-\|tail	phage tail family protein	D6R3Z9	Bacillus_phage	1.3e-107	67.1
WP_080627011.1\|3393840_3398310_-\|tail	phage tail tape measure protein	A6M961	Geobacillus_virus	1.3e-70	42.4
WP_043054229.1\|3398518_3398884_-	hypothetical protein	NA	NA	NA	NA
WP_043054228.1\|3398937_3399555_-\|tail	tail protein	NA	NA	NA	NA
WP_043054227.1\|3399569_3399953_-	phage protein	NA	NA	NA	NA
WP_043054226.1\|3399949_3400348_-	hypothetical protein	NA	NA	NA	NA
WP_080627012.1\|3400347_3400656_-\|head	phage head closure protein	A0A2H4JCB1	uncultured_Caudovirales_phage	9.7e-13	37.6
WP_003185351.1\|3400645_3400948_-\|head,tail	phage gp6-like head-tail connector protein	A0A0S2GLH6	Bacillus_phage	1.2e-12	46.3
WP_065643430.1\|3400968_3401394_-	collagen-like protein	D6R3Z0	Bacillus_phage	2.9e-15	56.0
WP_075646713.1\|3401416_3402697_-\|capsid	phage major capsid protein	A0A288WGE9	Bacillus_phage	2.6e-75	43.8
WP_080627013.1\|3402766_3403498_-\|protease	Clp protease ClpP	A0A2I7SCY8	Paenibacillus_phage	8.9e-57	56.4
WP_071583905.1\|3403442_3404753_-\|portal	phage portal protein	D6R3Y6	Bacillus_phage	3.2e-105	46.3
WP_035316082.1\|3404753_3404945_-	DUF1056 family protein	NA	NA	NA	NA
WP_071583906.1\|3404957_3406667_-\|terminase	terminase large subunit	W8CZ43	Bacillus_phage	2.1e-210	63.8
WP_071583907.1\|3406663_3407179_-\|terminase	phage terminase small subunit P27 family	A6M947	Geobacillus_virus	6.3e-33	44.0
WP_080627014.1\|3407409_3407784_-	HNH endonuclease	A0A1U7Q1S7	Geobacillus_virus	1.8e-29	51.7
WP_080627015.1\|3407810_3408119_-	hypothetical protein	NA	NA	NA	NA
WP_006637235.1\|3408333_3408558_-\|coat	spore coat protein	NA	NA	NA	NA
WP_003185369.1\|3409296_3409677_-	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	3.0e-48	83.7
WP_080627017.1\|3410051_3410876_+	hypothetical protein	NA	NA	NA	NA
WP_080627107.1\|3410959_3411154_-	hypothetical protein	NA	NA	NA	NA
WP_080627018.1\|3411277_3411793_-	hypothetical protein	D6R425	Bacillus_phage	1.1e-82	83.6
WP_003185375.1\|3411795_3411966_-	Fur-regulated basic protein FbpA	A0A0S2SXY0	Bacillus_phage	8.8e-08	54.7
WP_080627019.1\|3411962_3412502_-	nuclease	Q9ZXC2	Bacillus_phage	5.9e-90	91.1
WP_080627020.1\|3412498_3412936_-	hypothetical protein	Q9ZXC3	Bacillus_phage	4.2e-62	75.2
WP_080627021.1\|3413204_3415643_-	DNA primase	D6R422	Bacillus_phage	0.0e+00	80.3
WP_061578359.1\|3415703_3416144_-	DUF669 domain-containing protein	Q9ZXC5	Bacillus_phage	3.1e-73	91.8
WP_080627022.1\|3416143_3417076_-	AAA family ATPase	Q9ZXC7	Bacillus_phage	1.2e-154	90.4
WP_080627023.1\|3417079_3417637_-	hypothetical protein	Q9ZXC8	Bacillus_phage	1.6e-69	71.9
WP_080627024.1\|3417729_3417972_-	hypothetical protein	NA	NA	NA	NA
WP_080627025.1\|3418065_3418332_-	hypothetical protein	Q9ZXC9	Bacillus_phage	9.5e-17	51.2
WP_017474831.1\|3418455_3418725_-	hypothetical protein	S5MC08	Brevibacillus_phage	8.4e-21	50.0
WP_026587143.1\|3418730_3418916_-	helix-turn-helix transcriptional regulator	A0A1C8E998	Bacillus_phage	1.5e-16	70.5
WP_080627026.1\|3419184_3419613_+	helix-turn-helix transcriptional regulator	Q5YAA4	Bacillus_phage	1.2e-45	65.2
WP_080627027.1\|3419621_3420044_+	ImmA/IrrE family metallo-endopeptidase	A0A0S2SXM3	Bacillus_phage	2.0e-45	61.6
WP_080627028.1\|3420088_3421237_+\|integrase	site-specific integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	3.6e-52	34.6
3421330:3421405	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage