CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP031250	Haemophilus influenzae strain M21384 chromosome, complete genome	1 crisprs	cas3,DEDDh,DinG	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP031250_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031250_1

877050-877129

Orphan

Consensus_repeat	Method
AAGTTATCAATGAAGGGAAAATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP031250_1

>merge|NZ_CP031250|1|877050-877129|CRISPRCasFinder
AAGTTATCAATGAAGGGAAAATTACGGCACAAGATTTCGTGGTACTTAATGGCGATGAAGTTATCAATGAAGGGAAAATT

>NZ_CP031250|1|1|877050-877129|CRISPRCasFinder
AAGTTATCAATGAAGGGAAAATT	ACGGCACAAGATTTCGTGGTACTTAATGGCGATG
AAGTTATCAATGAAGGGAAAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031250.1\|WP_114893202.1\|871254_872298_+\|ADP-heptose--LPS-heptosyltransferase-I	unknown	unknown	gnl\|CDD\|366450
NZ_CP031250.1\|WP_005668177.1\|886445_887087_-\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
NZ_CP031250.1\|WP_162816723.1\|874829_876521_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP031250.1\|WP_114893206.1\|879832_880432_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl\|CDD\|234691
NZ_CP031250.1\|WP_114893198.1\|865734_866202_-\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|181857
NZ_CP031250.1\|WP_042594202.1\|869853_870441_-\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP031250.1\|WP_050847335.1\|883683_884529_+\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_CP031250.1\|WP_005660635.1\|868130_868454_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|182378
NZ_CP031250.1\|WP_114893207.1\|882185_883211_+\|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl\|CDD\|234593
NZ_CP031250.1\|WP_114893208.1\|884568_885501_-\|tRNA-dihydrouridine(16)-synthase-DusC	unknown	unknown	gnl\|CDD\|236713
NZ_CP031250.1\|WP_021035723.1\|885500_886367_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP031250.1\|WP_005632808.1\|887110_887827_-\|ribonuclease-PH	unknown	unknown	gnl\|CDD\|178914
NZ_CP031250.1\|WP_005663942.1\|879393_879750_-\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|183219
NZ_CP031250.1\|WP_005660660.1\|883234_883546_+\|DUF2322-family-protein	unknown	unknown	gnl\|CDD\|370810
NZ_CP031250.1\|WP_005686689.1\|880472_882176_+\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarQ	unknown	unknown	gnl\|CDD\|236800
NZ_CP031250.1\|WP_114893199.1\|866302_867199_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP031250.1\|WP_114893203.1\|872621_874748_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273807
NZ_CP031250.1\|WP_114893201.1\|870452_871178_-\|3-deoxy-D-manno-octulosonic-acid-kinase	unknown	unknown	gnl\|CDD\|234975
NZ_CP031250.1\|WP_005660631.1\|865139_865592_-\|TonB-system-energizer-ExbB	unknown	unknown	gnl\|CDD\|131852
NZ_CP031250.1\|WP_114893200.1\|867310_867958_+\|outer-membrane-protein-assembly-factor-BamC	unknown	unknown	gnl\|CDD\|225854

Protein	Function_ID	Function_description	E-value
NZ_CP031250.1\|WP_114893202.1\|871254_872298_+\|ADP-heptose--LPS-heptosyltransferase-I	gnl\|CDD\|366450	pfam01075, Glyco_transf_9, Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.	1.00593e-98
NZ_CP031250.1\|WP_005668177.1\|886445_887087_-\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	1.40053e-88
NZ_CP031250.1\|WP_162816723.1\|874829_876521_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	2.42234e-129
NZ_CP031250.1\|WP_114893206.1\|879832_880432_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl\|CDD\|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	1.31665e-100
NZ_CP031250.1\|WP_114893198.1\|865734_866202_-\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|181857	PRK09437, bcp, thioredoxin-dependent thiol peroxidase; Reviewed.	5.0816e-113
NZ_CP031250.1\|WP_042594202.1\|869853_870441_-\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	2.32161e-115
NZ_CP031250.1\|WP_050847335.1\|883683_884529_+\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_CP031250.1\|WP_005660635.1\|868130_868454_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|182378	PRK10324, PRK10324, ribosome-associated translation inhibitor RaiA.	3.86051e-42
NZ_CP031250.1\|WP_114893207.1\|882185_883211_+\|UDP-N-acetylmuramate-dehydrogenase	gnl\|CDD\|234593	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase.	0
NZ_CP031250.1\|WP_114893208.1\|884568_885501_-\|tRNA-dihydrouridine(16)-synthase-DusC	gnl\|CDD\|236713	PRK10550, PRK10550, tRNA dihydrouridine(16) synthase DusC.	0
NZ_CP031250.1\|WP_021035723.1\|885500_886367_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	3.67343e-158
NZ_CP031250.1\|WP_005632808.1\|887110_887827_-\|ribonuclease-PH	gnl\|CDD\|178914	PRK00173, rph, ribonuclease PH; Reviewed.	1.78122e-179
NZ_CP031250.1\|WP_005663942.1\|879393_879750_-\|dihydroneopterin-aldolase	gnl\|CDD\|183219	PRK11593, folB, bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase.	3.90522e-53
NZ_CP031250.1\|WP_005660660.1\|883234_883546_+\|DUF2322-family-protein	gnl\|CDD\|370810	pfam10084, DUF2322, Uncharacterized protein conserved in bacteria (DUF2322). Members of this family of hypothetical bacterial proteins have no known function.	6.19828e-49
NZ_CP031250.1\|WP_005686689.1\|880472_882176_+\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarQ	gnl\|CDD\|236800	PRK10935, PRK10935, nitrate/nitrite two-component system sensor histidine kinase NarQ.	0
NZ_CP031250.1\|WP_114893199.1\|866302_867199_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.20266e-172
NZ_CP031250.1\|WP_114893203.1\|872621_874748_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273807	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein. This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	0
NZ_CP031250.1\|WP_114893201.1\|870452_871178_-\|3-deoxy-D-manno-octulosonic-acid-kinase	gnl\|CDD\|234975	PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed.	2.72777e-128
NZ_CP031250.1\|WP_005660631.1\|865139_865592_-\|TonB-system-energizer-ExbB	gnl\|CDD\|131852	TIGR02805, Biopolymer_transport_protein_ExbB, tonB-system energizer ExbB, group 2. Members of this protein family appear to be the ExbB protein of an ExbBD proton-transporting membrane complex that, by means of TonB, energizes transport by TonB-dependent receptors. Note that this family represents one of at least two distinct groups TolQ homologs designated ExbB - see also TIGR02797. Each group associates with a distinct group of ExbD proteins, and a single species may have two ExbB/ExbD/TonB systems. [Transport and binding proteins, Cations and iron carrying compounds].	2.69965e-72
NZ_CP031250.1\|WP_114893200.1\|867310_867958_+\|outer-membrane-protein-assembly-factor-BamC	gnl\|CDD\|225854	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane].	2.86387e-75

>NZ_CP031250.1|WP_162816723.1|874829_876521_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRPRYSVIASAVSLGFILSKSVMALGRPDTGSLNRELEQRQIQSEAKPSGELFNQTANSPYTAQYKQGLKFPLTQVQILDRNNQEVAADELAHILKNYVGKEVSLSDLSNLANEISEFYRHNNYLVAKAILPPQEIEQGTVKILLLKGNVGEIRLQNHSALSNKFVSRLSNTTVNTSEFILKDELEKFALTINDVPGVNAGLQLSAGKKVGEANLLIKINDAKRFSGYVSVDNQGNKYTGRYRLAAGTKVNNLTGWGDELKLDLLSSNQANLKNARIDYSSLIDGYSTRFGVTANYLHYKLGGNFKSLQSQGHSHTLGAYLLHPTIRTPNFRLSTKVSFNHQNLTDKQQAVNVKQKRKINSLTAGIDGSWNLIKDGTTYFSLSTLFGNLANQTSEKQHNAVENFQPQSHFTVYNYRLSHEQILPKSFAFNIGINGQFADKTLESSQKMLLGGLSGVRGHQAGAASVDEGHLIQTEFKHYLPVFSQSVLVSSLFYDYGFGKYYKHSQFLAKGVKNSVKLQSVGAGLSLSDAGSYAINASIAKPLDNNINNADKHQFWLSMIKTF
>NZ_CP031250.1|WP_114893203.1|872621_874748_+|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MRFSKLSFAVATTLVTANVLAQSTELDPINVIATRDPSRFAYTPQKQSKDSLLSKQATSVAAALEDIPNVDVRGGSRSIAQKPNIRGLSDNRVVQVIDGVRQNFDLAHRGSYFLPMSLIQEIEVIKGPSSSLWGSGALGGVVAMRTPNALDLLKNNDKFGVKIRQGYQTANNLSERDVSVFAANDKFDVLISGFYNNADNLRTGKGNKLNNTAYKQFGGLAKFGWQINDANRVELSHRETRFKQTAPSNNEVENEFTNEKIIDQIKEFHGSNNSFSPKAKPSQEEFYSGVKTRFGSVSYLSDQQIPDQSTVFNYYLTPDNPYLNTHIALYNNKTIEKEQRKVSGVKDQTKLTTRGINLRNSSELSHISFVYGVDYMRDKISTERGTNDKDAKFRAEPYNANSNTTGVYLIAHIPLFGEKLLLSPSVRYDHYDTSSKTVKYKDKHLSPATKLTWKVTNWLDFSAKYNEAFRAPSMQERFVSGSHFGADVGQHLVNKFVANPNLRPETAKNKEITANLHFDSLFKQGDKFKIEATYFRNDVEDLINLKIFNDPNVKGALLPTNSQYQNIANARLSGIELQAQYQTERLTLFTNYGSTKGRDKDSGEALSNIAASKIGVGADYALVKDKFTVGATITHYVAQHRVPKDHAVTYPSYILTDLRATYAPLKGEWKNLRLDFALENLFDRKYQPAFSLMEGTGRNAKISAVYSF
>NZ_CP031250.1|WP_114893202.1|871254_872298_+|ADP-heptose--LPS-heptosyltransferase-I
MPLFTEAPKSLCILRLSAVGDVCHALAVVQHIQEYYPQTEMTWIVGKTEMGLLSGIPNVTLIPYDKKAGWKGILSLWKQLKNKQFDALLNMQTAFRASILSLGIKAKFKIGFGEKRSREGQWLFVNRRITDPFSPHVLDGFMAFAEYIGVPKSEPKWELAISEDDYKFADQFIDFSRKNLLISPCSSKAEKDWLIERYAEIANIAHQHNINVIFCSSPAKRELEIVEKITALCHFTLTNIAGKTNLKQLTALISKVDLVLSPDSGPAHIATTQGTPVIGLYAYHNPLRTAPYNNLDNVVSVYEENAQKEFGKPSSELPWATKLKGKNLMAEIQVEPVIEQMKKLGLF
>NZ_CP031250.1|WP_114893201.1|870452_871178_-|3-deoxy-D-manno-octulosonic-acid-kinase
MHQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGITYFLQTEDWFGVNCALRHYYRGGLWGKLNKDRYRFSDLETTRSFAEFHLLQRLYEAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKETWTQIGRLIRKLHDLQICHTDLNAHNILLQQAEQGQKCWLLDFDKCGEKSGDFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLTSAYHQ
>NZ_CP031250.1|WP_042594202.1|869853_870441_-|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase
MKQKIVLATGNKGKVKEMADVLSDFGFEVIAQTDLGIESPEETGLTFVENALLKARYASEKSGLPAIADDSGLVVSALNGAPGLYSARYAGEEGNDAKNREKLLAELAHVAQDQRQAKFVSCIVFLQHPTDPSPIIAEGECCGVIGFEEKGENGFGYDSLFFSPEQGCTFAELETAEKKKISHRAKALSVLKNKL
>NZ_CP031250.1|WP_005660635.1|868130_868454_+|ribosome-associated-translation-inhibitor-RaiA
MTLNITSKQMDITPAIREHLEERLAKLGKWQTQLISPHFVLNKVPNGFTVEASIGTPLGNLLASATSDDMYKAINEVEEKLERQLNKLQHKSESRRANERLKDSFEI
>NZ_CP031250.1|WP_114893200.1|867310_867958_+|outer-membrane-protein-assembly-factor-BamC
MKKIILSLTTAIILVGCSSNPETLKASNDSFQKSEASIPHFSPLATGGVQLPKADDAYSLPNIEVKKRGDIDIRPPLIPLAIIQNSITKFDGERSLIVYPKQQAKLYNLQQVERLLKEEGISSTTNGSILTTDWTKTERIGDKPIEIKYQIEQVMTPDVSAITVSILHMRRDGIIFTPNVSDKQYYTSERLNRIVLTLTTAYNKQLQDLSSTSIQ
>NZ_CP031250.1|WP_114893199.1|866302_867199_+|4-hydroxy-tetrahydrodipicolinate-synthase
MSAQNPLFSGSIVALVTPMNHYGEVDFSCLEKLVEHHIEAGSNALVSVGTTGESATLSIEENVKVIEKTVEFAKGRIPIIAGAGANATSEAITMTKLLRDSGVAGCLSVVPYYNKPTQEGIYQHFKAIAECTNLPQILYNVPSRTGSDMKPETVARLAKIENIVGIKEATGDVSRIVKINQLAGKNFIVLSGDDATGLEAIKLGAEGVISVTNNIAAKDMADMCRYALAGDFNKAEEINARLMRLHHDLFIESNPIPVKWAAYRLGLIKSPHLRLPLTTLSEEIQPKVEDALKIAGLL
>NZ_CP031250.1|WP_114893198.1|865734_866202_-|thioredoxin-dependent-thiol-peroxidase
MNPLSVGNQAPAFTLLNQQEKPVSLNDFRGKKVLIYFYPKALTPGCTTQACGLRDSKSELDELGLVVLGISPDAPKKLAQFIEKKELNFTLLSDPDHQVAAQFGVWGEKKFMGRTYDGIHRISFLINESGNIMQVFDKFKTKDHYQMIIDYLRSL
>NZ_CP031250.1|WP_005660631.1|865139_865592_-|TonB-system-energizer-ExbB
MLQLFDFLQQYSDYFIIGLLLLMSVIMLAMVIERYLFLRKVNAAHYSTIHALEIDLNRNMTVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSEIMLHLSLALKATALGILVAIPSMVFYNGLGRKVEVNRLKWKVLNEQKDKE
>NZ_CP031250.1|WP_005663942.1|879393_879750_-|dihydroneopterin-aldolase
MDRIFIEELTVFAQIGVYDWEQQIKQKLVFDLEMAWDCKQAAETDDVEYCLNYAEVSQVIIDYVESKPFLLIERVAYEVAELLESRYQLQGLKIKLSKPKAVAQARNVGVLIIRGCLK
>NZ_CP031250.1|WP_114893206.1|879832_880432_+|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MSLFALFYMLFAYLLGSISSAILICRLTGLPDPRQNGSHNPGATNVLRIGNRKSALAVLIFDMLKGMIPVWAGYYLGLIQFELGMVALGACLGHIFPIFFQFKGGKGVATAFGAIAPISWAVAGSMFGTWILVFLISGYSSLSAVLTALLVPFYVWWFKPEFTFPVALVCCLLIYRHHDNIQRLWRGQEDKVWAKFKKK
>NZ_CP031250.1|WP_005686689.1|880472_882176_+|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarQ
MHTKRSVSTRIAKYLFIILIVAGVISSLSLAIISSNKYDAKAINISGSLRMQSYRLLYEMRTQPESIENNLRRYQVSLHSSALLETQNQFFTPKAVKLSYQTILRRWAIMEKYARQYDVKNYSEQLTDYVADVDHFVFELQRFSEQKWILGVSVLFFAMLLILAMVSYVIWYTQREVVKPLHLMTKASMQVQMRQFNHIPLDTTKQNELGTLARVFTQMSTELGQLYSRLEEAVNEKTQKLRQTNRTLSTLYQSAQLLNTNTINDKILNQVLNYIFISEHLNFVKVEVMGAEHWDITLGERETDSALQIEPLSVDNEELGVLSWQAGLPCPDPRIMQNLAQMLARALYFHKNLRQKEQLLLMEERSIIARELHDSLAQVLSFLQIQLTLLKHNLKKEDEQSKEKSLAIIADFEQALSGGYAQLRELLATFRLTIQEANLQLALEQVINSLRTQTSMQMNVKSQLPSQSLNPQQLVHILQIVREATTNAIKHSQGTAIEISARINAEGEYEILVEDDGVGIPNLEEPEGHYGLNIMAERCRQLNAQLHIHRREQGGTQVKITLPHTLF
>NZ_CP031250.1|WP_114893207.1|882185_883211_+|UDP-N-acetylmuramate-dehydrogenase
MQNLQPFHTFHIQSNAREIIEAHSIEQLQQVWAYSKSENLPVLFLGQGSNVLFLDNFNGVVVLNRLMGITHEQDANFHYLHVNGGENWHKLVEWSINNGIYGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVDVLNLNTNETFRLDTEQCEFGYRESIFKHRYQQGYVITAVGLKLKKDWQPILKYGSLVAFDPKTVTAKQIFDEVCHIRKSKLPDPNETGNAGSFFKNPVVSSEHFEEIKKHHENLPHFPQADGSVKLAAGWLIDQCNLKGFQIGGAAVHKKQALVLINKSGATGQDVVKLAHHVRQTVVEKFGVYLQPEVRFISETGEVNSEQTIA
>NZ_CP031250.1|WP_005660660.1|883234_883546_+|DUF2322-family-protein
MNFKEILETLPNIDHLTGLNVMNGETIIHNIPAIQGKLGSLRLYNALAEKFNGKLNRTSAQQGVEWFAEHVEDAKANPGKHPNIDLLFKVVDENLNLTLIPLC
>NZ_CP031250.1|WP_050847335.1|883683_884529_+|RNA-polymerase-sigma-factor-RpoH
MDKETQMMLVPQGSIEGYIRAANEYPMLTAEEEKELAERLYYHEDLDAAKKLILSHLRFVIHVARGYSGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNENEVDMVANELGVSKEDVIEMESRMSGADVGFDLPTDDAETEIYSPSLYLEDKSSNFAAELENENFESQATEQLNTALQSLDARSQDIIKARWLDDNKATLHDLAAKYNVSAERIRQLETNALKKLKSAVSF
>NZ_CP031250.1|WP_114893208.1|884568_885501_-|tRNA-dihydrouridine(16)-synthase-DusC
MRVILAPMQGVLDPFVRQLLTEVNDYDLCITEFVRVVDQLLPEKVFYRLCPELKNQGFTSSGTPVRVQLLGQHPECLAENAIRAIELGSHGIDLNCGCPSKTVNGSNGGAALLKQPELIYRATQALRQAVPSEFPVSVKVRLGWDNISQAFEIADAVEQGGATEITVHGRTKADGYRADRINWKKIGKVRERLSIPVTANGEIWHWQDGQDCLSQTGCQDLMVGRGALNIPNLSHVLKSNAEKMPWNEIQKILQKYANVENEYGSGFYHVARIKQWLRYLNKEYDEANQEFDKIKTCQTAEDLKLRLNDK
>NZ_CP031250.1|WP_021035723.1|885500_886367_-|co-chaperone-DjlA
MNFIGKIIGVFLGWKVGGFFGAIAGLILGSIADKKLYELGSVSSSFFKKKTTRQDLFMQTTFAVLGHLSKSKGRVTEEDIQLANQLMIQLKLDDAGRKLAQDAFRRGKESDFPIRQVIREFRIGCGQRADLLRMFLQVQVQAAFADSELHENEKEVLYVIAEELGLSRMQFEQMIAMEMAARAFTQGSFYQQYQQGAYQGGYQYQQQNSGGYQHASGPTLNDAYKVLGVTESDEQNTVKRAYRRLMNEHHPDKLVAKGLPPEMMEMAKEKTQQIQAAYDLICKAKGWK
>NZ_CP031250.1|WP_005668177.1|886445_887087_-|orotate-phosphoribosyltransferase
MEQYKRDFIEFALSRNVLKFGEFTLKSGRKSPYFFNAGLFNTGADLARLGEFYAAAIQASAVDFDVVFGPAYKGIPIGTSVSVALFNRYGIDKPVCFNRKEVKDHGEGGNLIGSPLQGKILLVDDVITAGTAIRESMELISANQAELVAVLIALNRKERGKGELSAIQEVERDYQCQVLSIIDLDDLMQFIEQDPRYSSHLPEMRAYRAEFGV
>NZ_CP031250.1|WP_005632808.1|887110_887827_-|ribonuclease-PH
MRPNNRENNQPRQIKITRNYTKHAEGSVLVEFGDTKVLCTATVEDAVPRFLKGQGQGWVTAEYGMLPRSTHSRMQREAAKGKQGGRTMEIQRLIARSLRAMVDLKALGERAITLDCDVIQADGGTRTASITGAAVALCDAINGLIENGTLKTNPIKGLVSAISVGIVDGQAVCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLTLLDLAKQGCNQIFIAQREALGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

81163 : 102040

Haemophilus_phage(63.16%)

capsid,head,plate,terminase,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114892805.1\|81163_83008_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	3.6e-22	29.3
WP_005651690.1\|83085_83364_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_114892806.1\|83811_85455_+\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	5.4e-251	78.8
WP_114892807.1\|85458_87096_+	DUF935 domain-containing protein	B7SDN1	Haemophilus_phage	2.4e-198	66.2
WP_112081056.1\|87082_88360_+\|capsid	minor capsid protein	B7SDN5	Haemophilus_phage	1.3e-122	52.9
WP_114892808.1\|88470_88956_+	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	6.0e-33	50.9
WP_114892809.1\|89267_90260_+	hypothetical protein	B7SDN9	Haemophilus_phage	1.2e-101	60.5
WP_114892810.1\|90259_91180_+\|head	head protein	B7SDP1	Haemophilus_phage	2.7e-127	71.9
WP_114892811.1\|91219_91528_+	hypothetical protein	B7SDP3	Haemophilus_phage	1.3e-20	53.8
WP_111689169.1\|91537_91969_+	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	6.1e-37	60.9
WP_114892812.1\|91952_92615_+	DUF1834 family protein	A0A0M3LQJ7	Mannheimia_phage	1.4e-45	45.0
WP_005688541.1\|92586_92769_+	DUF2635 domain-containing protein	A0A0M3LQM9	Mannheimia_phage	8.2e-12	64.8
WP_114892813.1\|92761_94177_+\|tail	phage tail protein	B7SDP8	Haemophilus_phage	2.5e-156	62.2
WP_021034875.1\|94186_94558_+	hypothetical protein	A0A0M3LRV6	Mannheimia_phage	1.2e-36	65.0
WP_006995428.1\|94557_94899_+	hypothetical protein	A0A0M3LSI2	Mannheimia_phage	1.1e-20	51.4
WP_114892814.1\|94913_95120_+	hypothetical protein	NA	NA	NA	NA
WP_114892815.1\|97447_98782_+	phage morphogenesis protein	F6MIL2	Haemophilus_phage	3.5e-107	44.9
WP_114892816.1\|98771_99896_+\|tail	phage tail protein	F6MIL3	Haemophilus_phage	7.9e-145	72.1
WP_105892759.1\|99905_100541_+\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	2.1e-62	58.7
WP_114892817.1\|100610_100961_+	hypothetical protein	A0A0M3LQK5	Mannheimia_phage	9.2e-44	73.3
WP_114892818.1\|100975_102040_+\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	9.1e-127	65.7

DBSCAN-SWA_2

123283 : 131824

Escherichia_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114892831.1\|123283_123937_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.4e-06	24.2
WP_114892832.1\|124074_124635_+	superoxide dismutase family protein	Q9MC02	Salmonella_phage	9.3e-46	60.4
WP_114892833.1\|124724_125003_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_048955094.1\|125011_125374_-	membrane protein	NA	NA	NA	NA
WP_114892834.1\|125348_126458_-	transglutaminase family protein	NA	NA	NA	NA
WP_114892835.1\|126711_129132_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	2.2e-224	50.7
WP_038441398.1\|129142_129760_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.8e-73	57.8
WP_114892836.1\|129761_130601_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	8.5e-19	31.1
WP_005686307.1\|130712_131324_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	2.3e-21	32.5
WP_111689176.1\|131323_131824_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	1.5e-10	30.3

DBSCAN-SWA_3

1194410 : 1268890

Mannheimia_phage(20.0%)

capsid,head,lysis,protease,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114893367.1\|1194410_1194926_-\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_114893368.1\|1195220_1196375_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.2e-127	62.5
WP_041175359.1\|1196885_1197350_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_162816736.1\|1197367_1198153_+	HAD family phosphatase	NA	NA	NA	NA
WP_162816737.1\|1198189_1199989_-	AMP-binding protein	A0A1V0SBX8	Catovirus	1.5e-44	25.5
WP_061720880.1\|1200182_1201202_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_114893371.1\|1201453_1202080_+	guanylate kinase	K4JYM5	Abalone_herpesvirus	9.8e-20	35.6
WP_050848773.1\|1202142_1202409_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_114893372.1\|1203081_1205196_+	bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	3.3e-11	38.8
WP_114893373.1\|1205192_1207274_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_114893374.1\|1207303_1208113_+	glutamate racemase	NA	NA	NA	NA
WP_114893375.1\|1208323_1209469_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA
WP_114893376.1\|1215294_1216224_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_114893377.1\|1216233_1216953_+	azaleucine resistance protein AzlC	NA	NA	NA	NA
WP_005670246.1\|1216949_1217279_+	hypothetical protein	NA	NA	NA	NA
WP_038439638.1\|1217381_1217615_+	membrane protein	NA	NA	NA	NA
WP_061671252.1\|1217690_1219271_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	3.3e-32	26.1
WP_038439640.1\|1219608_1220397_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_112101967.1\|1220476_1222456_+	exoribonuclease II	Q0GXV6	Lactococcus_phage	1.1e-24	25.3
WP_114893378.1\|1222853_1230362_+	hypothetical protein	NA	NA	NA	NA
WP_050951556.1\|1230610_1231252_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA
WP_114893379.1\|1231248_1232178_+	5-oxoprolinase/urea amidolyase family protein	NA	NA	NA	NA
WP_114893380.1\|1232164_1232902_+	5-oxoprolinase subunit PxpA	NA	NA	NA	NA
WP_114893381.1\|1232945_1234139_+	divalent metal cation transporter	NA	NA	NA	NA
WP_114893382.1\|1234215_1235550_-	argininosuccinate synthase	A0A140XAJ5	Dickeya_phage	6.4e-53	79.4
WP_114893383.1\|1235726_1236599_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	8.8e-51	36.0
WP_114893384.1\|1236763_1239112_-	penicillin-binding protein 1B	NA	NA	NA	NA
WP_061671243.1\|1239118_1239472_-	YacL family protein	NA	NA	NA	NA
WP_021035408.1\|1239473_1239818_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	1.7e-26	48.6
WP_061671242.1\|1239954_1240761_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_114893385.1\|1240853_1243445_+	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA
WP_114893386.1\|1244231_1245299_+	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA	NA	NA	NA
WP_071162634.1\|1245596_1246145_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	9.1e-30	40.7
WP_114893387.1\|1246215_1247256_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_005654341.1\|1247414_1247672_+	phosphocarrier protein Hpr	NA	NA	NA	NA
WP_114893388.1\|1247751_1249479_+	phosphoenolpyruvate-protein phosphotransferase PtsI	NA	NA	NA	NA
WP_005688036.1\|1249538_1250039_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_048951515.1\|1250176_1250272_+	hypothetical protein	NA	NA	NA	NA
WP_061723924.1\|1250386_1250752_+	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	7.7e-09	34.2
WP_038440999.1\|1250815_1251481_+	response regulator	NA	NA	NA	NA
WP_114893389.1\|1251477_1252833_+	two-component system sensor histidine kinase QseC	W8CYF6	Bacillus_phage	2.2e-16	27.2
WP_114893390.1\|1253098_1255126_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.6e-18	24.8
WP_114893391.1\|1255162_1256638_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	2.2e-46	35.9
WP_005664886.1\|1256744_1257848_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_114893392.1\|1257844_1258921_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_114893393.1\|1259114_1261385_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_114893394.1\|1262031_1262814_-\|portal	phage portal protein	Q19UT6	Mannheimia_phage	1.5e-94	65.2
WP_110431361.1\|1264686_1265736_+\|capsid	phage major capsid protein, P2 family	A4JWP9	Burkholderia_virus	1.4e-87	51.3
WP_114893395.1\|1266611_1267118_+\|head	head completion/stabilization protein	A0A0M3LNL8	Mannheimia_phage	8.1e-33	50.3
WP_112102802.1\|1267117_1267327_+\|tail	phage tail protein	NA	NA	NA	NA
WP_114893396.1\|1267328_1267550_+\|lysis	lysis protein	NA	NA	NA	NA
WP_112102804.1\|1267542_1268061_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	9.5e-37	46.0
WP_114893397.1\|1268171_1268468_+	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	2.6e-07	51.7
WP_114893398.1\|1268467_1268890_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	3.3e-19	52.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage