CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP031242	Haemophilus influenzae strain M21460 chromosome, complete genome	3 crisprs	cas3,DEDDh,WYL,DinG	1	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP031242_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031242_1

7011-7159

Orphan

Consensus_repeat	Method
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP031242_1

>merge|NZ_CP031242|1|7011-7159|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTTTATAATGTGAAATTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

>NZ_CP031242|1|1|7011-7159|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTTTATAATGTGAAA
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031242.1\|WP_005654345.1\|12240_12606_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	unknown	unknown	gnl\|CDD\|129260
NZ_CP031242.1\|WP_005658248.1\|16996_18472_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP031242.1\|WP_005658251.1\|14933_16961_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|224211
NZ_CP031242.1\|WP_042594344.1\|3147_5739_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	unknown	unknown	gnl\|CDD\|234980
NZ_CP031242.1\|WP_005649971.1\|11913_12126_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224399
NZ_CP031242.1\|WP_011272762.1\|7899_8940_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237039
NZ_CP031242.1\|WP_005658253.1\|13301_14657_+\|two-component-system-sensor-histidine-kinase-QseC	unknown	unknown	gnl\|CDD\|182388
NZ_CP031242.1\|WP_005661059.1\|1411_1765_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|225654
NZ_CP031242.1\|WP_011961860.1\|11230_11731_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|181859
NZ_CP031242.1\|WP_042594343.1\|2247_3054_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP031242.1\|WP_042594345.1\|5813_6881_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	unknown	unknown	gnl\|CDD\|131433
NZ_CP031242.1\|WP_005654936.1\|1766_2111_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
NZ_CP031242.1\|WP_042611788.1\|9443_11171_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	unknown	unknown	gnl\|CDD\|183017
NZ_CP031242.1\|WP_011961859.1\|9098_9356_+\|phosphocarrier-protein-Hpr	unknown	unknown	gnl\|CDD\|182777
NZ_CP031242.1\|WP_009500975.1\|7280_7829_-\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429

Protein	Function_ID	Function_description	E-value
NZ_CP031242.1\|WP_005654345.1\|12240_12606_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	gnl\|CDD\|129260	TIGR00156, Uncharacterized_protein_HI_1709, TIGR00156 family protein. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae. [Hypothetical proteins, Conserved].	8.01756e-57
NZ_CP031242.1\|WP_005658248.1\|16996_18472_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP031242.1\|WP_005658251.1\|14933_16961_+\|BCCT-family-transporter	gnl\|CDD\|224211	COG1292, BetT, Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane].	0
NZ_CP031242.1\|WP_042594344.1\|3147_5739_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	gnl\|CDD\|234980	PRK01759, glnD, bifunctional uridylyltransferase/uridylyl-removing protein GlnD.	0
NZ_CP031242.1\|WP_005649971.1\|11913_12126_+\|hypothetical-protein	gnl\|CDD\|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	9.985e-06
NZ_CP031242.1\|WP_011272762.1\|7899_8940_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
NZ_CP031242.1\|WP_005658253.1\|13301_14657_+\|two-component-system-sensor-histidine-kinase-QseC	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	3.24236e-178
NZ_CP031242.1\|WP_005661059.1\|1411_1765_-\|YacL-family-protein	gnl\|CDD\|225654	COG3112, COG3112, Uncharacterized protein conserved in bacteria [Function unknown].	6.22982e-60
NZ_CP031242.1\|WP_011961860.1\|11230_11731_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|181859	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional.	1.49426e-100
NZ_CP031242.1\|WP_042594343.1\|2247_3054_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	6.86467e-160
NZ_CP031242.1\|WP_042594345.1\|5813_6881_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	gnl\|CDD\|131433	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. Members of this family are the WecA enzyme of enterobacterial common antigen biosynthesis, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. This family represents one narrow clade, and closely related sequences outside this clade may represent enzymes that catalyze the same specific reaction, but in the context of different pathways. A His-rich motif in a cytosolic loop of this integral membrane protein, shown critical to enzymatic activity for WecA is variously present or absent in the clade that includes Bacillus subtilis TagO teichoic acid biosynthesis enzyme, which may catalyze the same reaction as WecA. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NZ_CP031242.1\|WP_005654936.1\|1766_2111_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	1.29077e-81
NZ_CP031242.1\|WP_042611788.1\|9443_11171_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	gnl\|CDD\|183017	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI.	0
NZ_CP031242.1\|WP_011961859.1\|9098_9356_+\|phosphocarrier-protein-Hpr	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	1.7508e-37
NZ_CP031242.1\|WP_009500975.1\|7280_7829_-\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	3.63664e-134

>NZ_CP031242.1|WP_042594345.1|5813_6881_+|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase
MLSIFVTFLGAFLTLIVMRPLANWIGLVDKPNYRKRHQGTIPLIGGVSLFVGNLCYYLMEWDQLRLPYLYLFSIFVLLAIGILDDRFDISPFLRAGIQAILAILMIDLGNIYLDHLGQILGPFQLTLGSIGLIITVFATIAIINAFNMIDGIDGLLGGLSCVSFAAIGILMYRDGQMDMAHWSFALIVSILPYLMLNLGIPFGPKYKVFMGDAGSTLIGFTIIWILLLSTQGKGHPMNPVTALWIIAIPLIDMVAIIYRRVRKGKSPFRPDRLHVHHLMVRAGLTSRQAFLLITFVSAVCATIGILGEVYYVNEWAMFVGFFILFSLYVYSITHAWRITRWVRRMKRRAKRLKKA
>NZ_CP031242.1|WP_042594344.1|3147_5739_+|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD
MLFSPTLSSPLTPSAVKIERENLKQFELENFSCYSIFELIENRCDFYDALLIQLWQEMELSEQQEISLIAVGGYGRRDMFPLSDLDFLILVEQTPSPKIEEKITQFIQFLWDCGFEVGNSVRTLAQCESEGKQDITIATNLLEARFLTGNRPHFDALNELVKRADFWSKEDFFNAKVQEQIERYQRYHNTAYNLEPDIKFSPGGLRDLHLLYWVALRHSGALTLEAILQSGFIYPQEYLQLQESRAFLFKVRFALHLILKRYDNRLLFDRQIKVSELLGFRGEGNPAVEKMMKCFFQALHRISLISNLLIQHYRENVLPSNQDTVIDQLDDDFQLINQCLCLRNSFVFQEKPARILDLFFYLTQYEHANIHSDTLRQLQISLDQLSQKLCEIPAAREKFLRLFNQPNAIKRAFMPMHQYGVLTAYLPQWQAIEGLMQFDLFHIYTVDEHTLRVMLKLESFLSQESAQEHPIAHRIFSQLSDRTLLYIAALFHDIAKGRGGDHAELGAVDIADFAQLHGLDRREIDTLAWLVKSHLLMSITAQRRDIHDPEVVMNFAEAVQNQVRLDYLTCLTVADICATNGNLWNSWKRSLFASLYEFTGRQFSQGMKELLDYSEKSAENRKLAQQILMRDYSDITPISIEQLWARCPEDYFVRNTPKQIAWHTSLLVDFVEALLVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIVPNRQLQHFPVQTDVRFLQENKKEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILRNVLYRNIG
>NZ_CP031242.1|WP_042594343.1|2247_3054_+|type-I-methionyl-aminopeptidase
MAIPIRTEKEIVKLREVCKLASDVLVMIEPYVKAGVTTGELDRICHEYMVNEQKVIPACLNYHGFPKSTCISINEVVCHGIPSDDKVLKNGDIVNIDVTVIKDGYFGDNSKMYIVGGETNIRSKKLVEAAQEALYVGIRTVKPDIRLNEIGKAVQKYTESQTFSVVREYCGHGVGTEFHCEPQVLHYYADDGGVILKPGMVFTIEPMINAGKKEVRVMGDGWTVKTKDRSHSAQYEHQLVVTETGCEVMTIRDEEIAEGRISRIMVNV
>NZ_CP031242.1|WP_005654936.1|1766_2111_-|iron-sulfur-cluster-insertion-protein-ErpA
MIDDIAVPLTFTDAAANKVKSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
>NZ_CP031242.1|WP_005661059.1|1411_1765_-|YacL-family-protein
MDFQFTHYQGNVSVKCSMEHIALANWFNTEVRSNSDKILTALSTAKSLIENQEKVLVGAEYTLFLNSDEVMVRANNLAIESDEILEQDFHYYDEESLAFCGTQDFIHFLQSYVDFIA
>NZ_CP031242.1|WP_009500975.1|7280_7829_-|oligoribonuclease
MPFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHFMKLD
>NZ_CP031242.1|WP_011272762.1|7899_8940_+|small-ribosomal-subunit-biogenesis-GTPase-RsgA
MAKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKVVWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAANIDRIIIVSAVLPTLSLNIIDRYLVVCEIAGITPLIVLNKVDLLAQEQRQEIEDQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSETSGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLSDPGCALREAVEQGKISPVRYDSYHRLIESLSETKSQRHFSLV
>NZ_CP031242.1|WP_011961859.1|9098_9356_+|phosphocarrier-protein-Hpr
MYSKDVEIIAPNGLHTRPAAQFVKEAKAFSSEITVTSGGKSASAKSLFKLQTLVLTQGTILTISADGEDEQQAVDHLVALIPTLE
>NZ_CP031242.1|WP_042611788.1|9443_11171_+|phosphoenolpyruvate-protein-phosphotransferase-PtsI
MISGILASPGIAFGKALVLKEEKIVLDTQKITDDQIDAEVARFYEGRAAAVEQLNSIRERALISLGEEKAAIFEGHLMILEDEELEEEILDYLRSNKVNAGVAASKILDQQVTMLSEIDDEYLKERAGDIRDIANRLVKNILRMYIVDLGDIQEESILVAYDLTPSETAQLNLEKVLGVVTDIGGRTSHTSIMARSLELPAIVGTNKVTKLVNTGDYLILDAINNQVYINPTASQIDELKALEAKISEEKAELAKLKDLPAITLDGHKVDVVANIGTIRDCDGAERNGAEGIGLYRTEFLFMDREQLPTEEEQFIAYKQVVEAMNGRLTVLRTMDIGGDKELSYLDLPKEMNPFLGWRAIRIALDRREILNAQLRAVLRASAFGKLAVMFPMIISVEEIRELKAVIETLKAELREEGRLFDNNIQVGVMVETPSAAVNAKFLAKEVDFFSIGTNDLTQYTLAVDRGNEFISHLYNPMHPSVLGLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISVPRIKKLIRNVNFQDAKVLADTALQKPTAAEIDQLIEEFLLENSLN
>NZ_CP031242.1|WP_011961860.1|11230_11731_+|PTS-glucose-transporter-subunit-IIA
MGLFDKLFGSKENKSVEVEIYAPISGEIVNIEDVPDVVFSEKIVGDGVAVRPIGNKIVAPVDGVIGKIFETNHAFSMESKEGVELFVHFGIDTVELKGEGFTRIAQEGQSVKRSDTVIEFDLALLESKAKSVLTPIVISNMDEISCIVKKSGEVVAGESVVLALKK
>NZ_CP031242.1|WP_005649971.1|11913_12126_+|hypothetical-protein
MQNIQYECGETHHLKAQSASILLVMKGQLNLRSETTALSLKQGKVAFITAGAAYEVEGLIEGYAVVAKLP
>NZ_CP031242.1|WP_005654345.1|12240_12606_+|YgiW/YdeI-family-stress-tolerance-OB-fold-protein
MKKFALATIFALATTSAFAGFNGNNSQGGFQQAAPAAISVKQALSAADNSMITLVGNITQQIDDDEFWFTDGTGQIKIEIKKRVWNGLNVDSKDKVKIYGKLDNEVFEKAELDVLRIEKVE
>NZ_CP031242.1|WP_005658253.1|13301_14657_+|two-component-system-sensor-histidine-kinase-QseC
MKNRSLTLRLISVLCLTALFVWLGSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSTILLESSTTLNKNSQSVLKKSYDDDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYNANIYDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMILGQMWIWFASLPILIIVLGWLIHKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTSDAAHELRSPLAALRIQTEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRLDNLQALETLQLLDWEAIVQSLISERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLDNAIKYCPEDTIVSVKISSSQIIIEDNGGGVEPEDLKKLGQRFYRPAGQNEKGSGLGLSIVMRIAELHGFKVRLENVVKEGRRIGLKAIISL
>NZ_CP031242.1|WP_005658251.1|14933_16961_+|BCCT-family-transporter
MSLSQFMTKRTSFNPLVIGVTLFFILLLMAMIFIAPEQTQALLNQAKSGIFANFSWFYVLTFSVFLGFLLILSVSSLGNIKLGQDEEEPEFSFLSWLAMLFAAGMGVGLMFFGVAEPLTHYLSDITVGSAEHKQQEALLHTLFHWGIHAWAVYGTIALALAYFGFRYKLPLALRSCFYPLLKDRINGKIGDAIDVMALLATLFGIITTLGFGSSQLGAGLEQIGWISQNSFALQVGVIVVVMCLAVFSAISGIGKGVKILSEINLTLAFCLLLFVLISGPTLYLLSAFSDNIGNYFSNLVQLSFKTYAYEQEHTSWFSGWTVLYWAWWCSWAPFVGLFIARISKGRTIREFIFGVLVIPSLFGILWFTVFGNTAVWLNDGIAAGGLGEFISSPEILLFKFLNYLPLPTITGFVSLLVISLFFITSADSGIYVLNNIASRDKSLASPAWQAIMWGTLMSVVAIVLMQSGGLANLQTMTLIVALPFALLMLVMCFSLWKGLIADKKYFSTKVNPTSIFWSGDKWKSHLEQMMNQTQEKDILRFLKNTALPAMRELRQELTGKYNLSVEINTLFEQEEPALELVIHKESMRDFMYGIKSVGREVSEQLINDENLPHIQHSVTYEPYTYFFDGRVGYDVQYMDQDELIADMLKQYERYLSLLDDVGQELMAHEQTELAE
>NZ_CP031242.1|WP_005658248.1|16996_18472_-|leucyl-aminopeptidase
MKYQAKNTALSQATDCIVLGIYENNKFSKSFNEIDQLTQGYLNDLVKSGELTGKLAQTILLRDLQGLSAKRLLIVGCGKKGELTERQYKQIIQAVLKTLKETNTREVISYLTEIELKDRDLYWNIRFAIETIEHTNYQFDHFKSQKAETSVLESFIFNTDCNQAQQAISHANAISSGIKAARDIANMPPNICNPAYLAEQAKNLAENSTALSLKVVDEEEMAKLGMNAYLAVSKGSENRAYMSVLTFNNAPDKNAKPIVLVGKGLTFDAGGISLKPAADMDEMKYDMCGAASVFGTMKAIAQLNLPLNVIGVLAGCENLPDGNAYRPGDILTTMNGLTVEVLNTDAEGRLVLCDALTYVERFEPELVIDVATLTGACVVALGQHNSGLVSTDNNLANALLQAATETTDKAWRLPLSEEYQEQLKSPFADLANIGGRWGGAITAGAFLSNFTKKYRWAHLDIAGTAWLQGANKGATGRPVSLLTQFLINQVK

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Crispr_ID: NZ_CP031242_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031242_2

35841-35928

Orphan

Consensus_repeat	Method
ACCTTCCCCCGCAAGCAAGGGAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP031242_2

>merge|NZ_CP031242|2|35841-35928|CRISPRCasFinder
ACCTTCCCCCGCAAGCAAGGGAAGGCAAGATTTTCTTTGAGCCTCTTTTTGTCACTTTGTGATACCTTCCCCCGCAAGCAGGGGAAGG

>NZ_CP031242|2|2|35841-35928|CRISPRCasFinder
ACCTTCCCCCGCAAGCAAGGGAAGG	CAAGATTTTCTTTGAGCCTCTTTTTGTCACTTTGTGAT
ACCTTCCCCCGCAAGCAGGGGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031242.1\|WP_005688002.1\|37275_38352_-\|electron-transport-complex-subunit-RsxD	unknown	unknown	gnl\|CDD\|234844
NZ_CP031242.1\|WP_005689725.1\|35943_36651_-\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NZ_CP031242.1\|WP_042594347.1\|43834_45991_+\|TIGR01666-family-membrane-protein	unknown	unknown	gnl\|CDD\|130727
NZ_CP031242.1\|WP_005658215.1\|31897_32626_+\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP031242.1\|WP_005689729.1\|32612_33668_+\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP031242.1\|WP_005688001.1\|38356_40312_-\|electron-transport-complex-subunit-RsxC	unknown	unknown	gnl\|CDD\|235334
NZ_CP031242.1\|WP_005689723.1\|36652_37276_-\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
NZ_CP031242.1\|WP_005658223.1\|27509_28283_+\|glycosyltransferase-family-25-protein	unknown	unknown	gnl\|CDD\|225843
NZ_CP031242.1\|WP_005658225.1\|26436_27498_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340847
NZ_CP031242.1\|WP_080316019.1\|46067_48020_-\|adhesin	unknown	unknown	gnl\|CDD\|375681
NZ_CP031242.1\|WP_005658221.1\|28294_29179_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP031242.1\|WP_005654371.1\|30998_31763_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP031242.1\|WP_005654380.1\|33691_35065_-\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271367
NZ_CP031242.1\|WP_005650033.1\|40312_40894_-\|electron-transport-complex-subunit-RsxB	unknown	unknown	gnl\|CDD\|235347
NZ_CP031242.1\|WP_005654147.1\|40981_41560_-\|electron-transport-complex-subunit-RsxA	unknown	unknown	gnl\|CDD\|235352
NZ_CP031242.1\|WP_005658219.1\|29180_29984_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133038
NZ_CP031242.1\|WP_005687998.1\|43101_43767_+\|DUF2057-domain-containing-protein	unknown	unknown	gnl\|CDD\|234990
NZ_CP031242.1\|WP_005689720.1\|41842_42904_-\|protease-SohB	unknown	unknown	gnl\|CDD\|236978
NZ_CP031242.1\|WP_005689727.1\|35123_35759_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661
NZ_CP031242.1\|WP_005658217.1\|30093_30861_-\|TOBE-domain-containing-protein	unknown	unknown	gnl\|CDD\|182640

Protein	Function_ID	Function_description	E-value
NZ_CP031242.1\|WP_005688002.1\|37275_38352_-\|electron-transport-complex-subunit-RsxD	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	0
NZ_CP031242.1\|WP_005689725.1\|35943_36651_-\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	4.5237e-131
NZ_CP031242.1\|WP_042594347.1\|43834_45991_+\|TIGR01666-family-membrane-protein	gnl\|CDD\|130727	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are >700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS. [Cell envelope, Other].	0
NZ_CP031242.1\|WP_005658215.1\|31897_32626_+\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	4.4308e-140
NZ_CP031242.1\|WP_005689729.1\|32612_33668_+\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP031242.1\|WP_005688001.1\|38356_40312_-\|electron-transport-complex-subunit-RsxC	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0
NZ_CP031242.1\|WP_005689723.1\|36652_37276_-\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	1.08851e-127
NZ_CP031242.1\|WP_005658223.1\|27509_28283_+\|glycosyltransferase-family-25-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	6.22864e-55
NZ_CP031242.1\|WP_005658225.1\|26436_27498_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	6.66878e-136
NZ_CP031242.1\|WP_080316019.1\|46067_48020_-\|adhesin	gnl\|CDD\|375681	pfam18254, HMw1_D2, HMW1 domain 2. This domain is found in Actinobacillus pleuropneumoniae HMW1C (ApHMW1C). HMW1 adhesin is an N-linked glycoprotein that mediates adherence to respiratory epithelium through N-glycosylation of protein acceptor sites and O-glycosylation of sugar acceptor sites. This domain forms an all alpha domain (AAD) when combined with the N-terminal domain. The AAD interacts extensively with the C-terminal GT-B fold in order to create a unique groove with the potential to accommodate the acceptor protein.	8.0852e-48
NZ_CP031242.1\|WP_005658221.1\|28294_29179_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	7.68429e-32
NZ_CP031242.1\|WP_005654371.1\|30998_31763_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	3.40456e-98
NZ_CP031242.1\|WP_005654380.1\|33691_35065_-\|sodium-dependent-transporter	gnl\|CDD\|271367	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter. An arrangement of 12 transmembrane (TM) helices appears to be as a common topological motif for eukaryotic and some prokaryotic and archaeal NTTs. However, this subfamily which contains the majority of bacterial members and some archaeal members, appears to contain only 11 TMs; for example the functional Fusobacterium nucleatum tyrosine transporter Tyt1.	1.13115e-164
NZ_CP031242.1\|WP_005650033.1\|40312_40894_-\|electron-transport-complex-subunit-RsxB	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	1.12731e-113
NZ_CP031242.1\|WP_005654147.1\|40981_41560_-\|electron-transport-complex-subunit-RsxA	gnl\|CDD\|235352	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional.	5.78855e-111
NZ_CP031242.1\|WP_005658219.1\|29180_29984_+\|glycosyltransferase	gnl\|CDD\|133038	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.	6.66963e-120
NZ_CP031242.1\|WP_005687998.1\|43101_43767_+\|DUF2057-domain-containing-protein	gnl\|CDD\|234990	PRK01904, PRK01904, DUF2057 domain-containing protein.	2.00852e-117
NZ_CP031242.1\|WP_005689720.1\|41842_42904_-\|protease-SohB	gnl\|CDD\|236978	PRK11778, PRK11778, putative inner membrane peptidase; Provisional.	0
NZ_CP031242.1\|WP_005689727.1\|35123_35759_-\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	8.06206e-140
NZ_CP031242.1\|WP_005658217.1\|30093_30861_-\|TOBE-domain-containing-protein	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	2.3464e-84

>NZ_CP031242.1|WP_005689727.1|35123_35759_-|endonuclease-III
MNKTKRIEILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVANTPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGRKTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPDEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVEF
>NZ_CP031242.1|WP_005654380.1|33691_35065_-|sodium-dependent-transporter
MTTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIVIGIPMILVENVIGRRLRVNSIDAFGDKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWVISYIISLISGTLDISTPITKDIAKNFYDLHIGNSPYEIIFYTLLFVIVNYIILAKGIIGGIERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFALSLGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLVFQSLPIVFSHLWAGKFFAIIFFGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTLSGIFLLGNIPAILGDNLWKNVTIFGKSIFDFYDYASGNILFMLTALGCAIFVGFVLKDEAKKELSSTKYSTFIKIWFNYVKFVVPLIILVIFISNLF
>NZ_CP031242.1|WP_005689729.1|32612_33668_+|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLQINVKKQLGKLALQANIQVPDQGVTAIFGLSGSGKTSLINLVSGLIQPDEGFIRLNDRTLVDMESQESLPTHLRKIGYVFQDARLFPHYTVKGNLRYGMKHVSQDDFNYIVDLLGITHLLKRYPLTLSGGEKQRVAIGRALLTDPDILLMDEPLSALDVPRKRELMQYLERLSKEINIPILYVTHSLDELLRLADRVVLMENGIVQAYDSVEKIWNSPIFAPWKGENEQSSVLALPVHLHNPPYKMTALSLGEQALWIHQVPANVGERVLVCIYSSDVSIILQKPEQTSIRNILRGKITQIEIQDSRVDLAVLVEGNKIWASISKWAQNELRFAVGQDVYVQIKAVSVM
>NZ_CP031242.1|WP_005658215.1|31897_32626_+|molybdate-ABC-transporter-permease-subunit
MLTQFFSFFNLTPMEISAINLSLSVAVSSMLWSLPLAIFVAWLLARKNFYGKSLITGVIHLPLVLPPVVIGYLLLVAMGRNGFIGKYLYQWFGLSFGFSWKGAVLSSAVVAFPLVVRAIRLSLENIDIKLEQAAQTLGASAWRVFFTITLPLSLPGVLAGLVLGFARSLGEFGATITFVSNIAGETQTIPLAMYSFIQTPAAEEQTARLCLFAIILSLISLLLSEWLSKRMQKKLGQGNVAN
>NZ_CP031242.1|WP_005654371.1|30998_31763_+|molybdate-ABC-transporter-substrate-binding-protein
MKKLTKISTALLIAGLGFSFAASAKVTVFAAASMTDALQQVAKDYAKQNPKNEVVFSFASSSTLAKQVEEGAPADIFVSASNKWMKYLSEKDLTVKETEKVLVGNDLVLIAPAKSAVNSVDIAKGEWINALKDSYLSVGDPAHVPAGQYAAEALTKLNLWDKVQDRLARAKDVRGALALVERAEAPYGIVYSTDAKVSQQVKTVAVFPADSHKPVVYPVSIVKGHDNADSRDFLKYLESDAAKKVLVGYGFSAK
>NZ_CP031242.1|WP_005658217.1|30093_30861_-|TOBE-domain-containing-protein
MKNTEILLTIKLQQALFIDPKRVRLLKEIQQCGSINQAAKNAKVSYKSAWDHLEAMNKISPRPLLERNTGGKNGGGTVLTTYAERLLQLYDLLERTQEHAFHILQDESVPLDSLLTATARFSLQSSARNQFFGRVAQQRIIDSRCVVDVNVQGLPTPLQVSITTKSSARLKLITEKEVMLMFKAPWVKISEQPLVNQPNQFSVNIKSLNEEEAILQFAESNIEFCATVHQPNQWQIGQQVWIHIDQEQIILATLG
>NZ_CP031242.1|WP_005658219.1|29180_29984_+|glycosyltransferase
MKFSVLMSLYIKENPQFLRECFESLVAQTRQADEIVLVFDGAVTPELESVVTEFETKLPLKLVKLPQNRGLGKALNEGLLHCTYDWVFRMDTDDICVPDRFEKQVAFIEQHPESIIFGGQIAEFGKNVNDIVAYRNVPTSAQEIIKFTQKRCPFNHMTVAYQKSAVINCGGYEDLQEDYYLWIKLVAQGLYMANLPDILVYARVGNGMVSRRRGVNQAKAEWRLFKLKYRLGIQGLLSGLFTFALRFGSRLLPTSLLKKLYQTFLRK
>NZ_CP031242.1|WP_005658221.1|28294_29179_+|glycosyltransferase-family-2-protein
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDYSKERVVVEQRYSFPVTVIRNETNQGAAESRNIGARASKGDWLLFLDDDDRFMPEKSEKILQVIEQNPDINFIYHPAKCEMVNEGFSYVTQPIEPQEISTERILLANKIGGMPMVAIKKEMFLKIGGLSTALRSLEDYDFLLKLLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINASYILAYPHIMNLSRKAAKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK
>NZ_CP031242.1|WP_005658223.1|27509_28283_+|glycosyltransferase-family-25-protein
MLKKYLISLDKDIQRRKLFFSQKNTEDFQIFSAINTMQKDWDELASIFNIEQFKAHYFRNVTKGEIGCTLSHLSVYQKIIEDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEIILLGQSKINSFNDTDLEINYPTTFSFLCKKTGNVNYAFPYKSYFAGTVGYLIKKSAARRFIQQISQNKPFWLADDFLLFEQDFNIRNKVVRPLMVIENPVLISNLESVRGSLSNNLLKKLMKYPLKKIFAIKKNLAN
>NZ_CP031242.1|WP_005658225.1|26436_27498_+|glycosyltransferase-family-4-protein
MKKIGFFIMNIESAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNKLPYSLKKDYFSITKKLRELVKELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNFTGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNNIITIANPNTLLPKNKLAKWENKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSVNFTPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFLCEKNNIEEMVKGLDLLINNPELYQQMSDKSRLMSEDYGIEKIIEEWKGIL
>NZ_CP031242.1|WP_005689725.1|35943_36651_-|electron-transport-complex-subunit-E
MTDLTEKNTALEEEKIESAVENQQKSIWKEIFAQGIWKNNPAVVQLLGLCPLLAVSSTATNALGLSLATMLVLTCTNTVISLFRQYIPKEIRIPIYVMIIATTVTAVQLLMNAYTYTLYQSLGIFIPLIVTNCIIIGRAEAFASKNSLLHSIWDGFSMGLGMALSLTILGALREIIGQGTIFEGIENLFGEQAKFLTHHIYHTDSSFLLFILPPGAFIGLGLLLAIKNRIDNVKK
>NZ_CP031242.1|WP_005689723.1|36652_37276_-|electron-transport-complex-subunit-RsxG
MGTVKITSRYGILLGFIALLCTIISAGIYFLTKDKIDAVIAAQQRELLLQVIPQDYFNNNLLESAVIPQDKNFVGIQKIYFAKKDGNISAYAYETTAPDGYSGDIRLLVGLDPKGEVLGVRVIEHHETPGLGDKIERRISNWILGFTNQSINEHNLSEWAVKKDGGKFDQFSGATITPRAVVNQTKRSALIMLNNQALLQQLSTQVK
>NZ_CP031242.1|WP_005688002.1|37275_38352_-|electron-transport-complex-subunit-RsxD
MFKMVSSPHTHSGKLTARIMLWVILAMMPAFFTQIYYFGFGVLLQSALAIGTAIIAEFIAIKLRGKKPLNYLSDFSVALTALILAMAIPPYAPYWVIIIGTLCAVLLGKQVYGGLGQNPFNPAMIGYVILLISFPLQMTTWMPPINLLQEPPTFSDAFSLIFSGLTTDGFTLSQLTHNIDGITQATPLDSAKIFYKSHNQLSDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLILKRIIHWQIPVAMLVTFFCLATATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASITPRGKIIFGALVGLFVYLIRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGYPTKGRK
>NZ_CP031242.1|WP_005688001.1|38356_40312_-|electron-transport-complex-subunit-RsxC
MADVLSRFNSGKLWDFKGGIHPPEMKSQSNSQPLRHLPLGTDFYIPLKQHLGTTGNLLIKEGDYVLKGQALTKGDGLRMLPVHAPTSGTIKSIKPYVATHPSGLDEPTIHLQSDGLDQWIERNPIDDFSTLSPEQLIHKIYQAGIAGLGGAVFPTAAKIQSAEQKVKLLIINGAECEPYITCDDRLMRERADEIIKGIRILRYILHPEKVVIAIEDNKPEAISAIRNALQGANDISVRVIPTKYPSGATKQLIYLLTGIEVPSGERSSSIGVLMQNVGTMFAIKRAVINDEPLIERVVTLTGNKIAEKGNYWVRLGTPISQILSDAGYQFDKHFPIFAGGPMMGLELPNLNAPVTKLVNCLLAPDYLEYAEPEAEQACIRCSSCSDACPVNLMPQQLYWFARSEDHKKSEEYALKDCIECGICAYVCPSHIPLIQYFRQEKAKIWQIKEKQKKSDEAKIRFEAKQARMEREEQERKARSQRAAQARREELAQTKGEDPVKAALERLKAKKANETESTQIKTLTSEKGEVLPDNTDLMAQRKARRLARQQAASQVENQEQQTQPTDAKKAVVAAAIARAKAKKLAQANSTSEAISNSQTAENEVEKTKSAVEKTQENSTALDPKKAAVAAAIARAKAKKLAKTQTTLENNQE
>NZ_CP031242.1|WP_005650033.1|40312_40894_-|electron-transport-complex-subunit-RsxB
MTFLFIVITLLALIFGAILGFASIKLKVEADPVVEKIDAILPQSQCGQCGYPGCKPYAEAICNGDEITKCIPGGQTTIVKIAEILGVDVPTMEGIEEPIEKVAFIDENMCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCILMIPVKKNIDNWDWKFDAKLVIPVMNVDGSEKKLVVGE
>NZ_CP031242.1|WP_005654147.1|40981_41560_-|electron-transport-complex-subunit-RsxA
MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVDHYILIPLNATFLRTLVFILVIAVVVQFTEMAINKTSPTLYRLLGIFLPLITTNCAVLGVALLNVNLAHNLTESVVYGFGASLGFSLVLVLFAALRERLVAADIPATFRGSAIALITAGLMSLAFMGFTGLVK
>NZ_CP031242.1|WP_005689720.1|41842_42904_-|protease-SohB
MLNDILTGYGIFILEILTILLLILAIVGLIISYRQHNKSKVGELEIKDLSEEFNEQVRLLRDFNLSEEEQKQRTKAEKKAEKQNAKKRKEKLKKGDTLEDEKKACVYVLDFCGDISASETTALREEISAILNVAKPEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNRPCLDIDKIATGEHWFGQQAIALQLVDEISTSDDLILEKMKEKQVLNVKYRLKKSLIKKFGRQAEESAINIIHRYSTKQSRDFMY
>NZ_CP031242.1|WP_005687998.1|43101_43767_+|DUF2057-domain-containing-protein
MKLRAVVLGLATLCASTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQNHQVVVRLNEIVGSGSNQSLFESNPVIVTFQGNAEDLVISAPVIRNLDSGDKFNQMPNITVKTKSGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAAASVSKFAATTVASSVAVAPAGNAKANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLNWAKSHK
>NZ_CP031242.1|WP_042594347.1|43834_45991_+|TIGR01666-family-membrane-protein
MNIRLNTKVISTIPVFIAVNIAAVGIWFFDISSQSMPLILGIIAGGLVDLDNRLTGRLKNVFFTLIAFSISSFIVQLHIGKPIQYIVLMTVLTFIFTMIGAVGQRYSTIAFGSLVVALYTTLTYIPEVNVWFINPVMILCGTLLYSVVAIIVYLFFPNRPVQESVAKAFCALGEYLDTKSCFFDPDEVAEIEKKHLKFAMKNANVVTAFNIVRTALFYRIRGQHRHPRTQRMLRYYFAAQDIHERANSTHFDYQQITEKLKNTDLIFRIQRLLELQAQSCKEITASLRENKPYHFNECVERALLGTLYSFELYQTQHTNVQDELIDIQTLLDNLQSINWQLRQLAQETTDTEQLAQIHTEQITGLKNISAVIFSHFTFESPLFRHAVRLSIVVFLCCAIVEFFQFNLGYWILLTTVFVCQPNYSATKVRLRQRIIGTILGVVVGSLLPYLNPTLELKLGLVVLTSTLFFFFRSNNYSFSTFFITLQVLLSFDVMGFDTAAALMPRLLDTLLGAAISWFAVSYLWPDWKYLQLDKVSHQALRSDAVYLLHIISQLQFGKSDDLKYRIARRNAHQYAAALSATLSNMNNEPVKYKAYLQKGFDLLKLNYSLLSYISALGAYRDRMKNLQQTAQFLSGFYPVAKKIIYTLEHIEEIPEAIFNQQQESIETHLKELEKQEMTVEERAVFSLPYQQLNLITQLLPQFYGYFKKEINCQNIGAL
>NZ_CP031242.1|WP_080316019.1|46067_48020_-|adhesin
MTKENLQSAPQNTTSSLVESNNDQTSPQILKQPPKPNLLRLEQHVAKKDYELACRELMAILEKMDANFGDVHDIEFDAPAQLAYLPEKLLIHFATRLANAITTLFSDPELAISEEGALKMISLQRWLTLIFASSPYVNADHILNKYNINPDSEGGFHLATDNSSIAKFCIFYLPESNVNMSLDALWAGNQQLCASLCFALQSSRFIGTASAFHKRAVVLQWFPKKLAEIADLNELPANILHDVYMHCSYDLAKNKHDVKRPLNELVRKHILTQGWQDRYLYTLGKKDGKPVMMVLLEHFNSGHSIYRTHSTSMIAAREKFYLVGLGSESVDEIGREVFDEFFEISSNNIMERLFFIRKQCETFQPAVFYMPSIGMDITTIFVSNTRLAPIQAVALGHPATTHSEFIDYVIVEDDYVGSEDCFSETLLRLPKDALPYVPSALAPQKVDYVLRENPEVVNIGIAATTMKLNPEFLVTLQEIRDKAKVKIHFHFALGQSTGLTHPYVKWFIESYLGDDATAHPHAPYHDYLAILRDCDMLLNPFPFGNTNGIIDMVTLGLVGVCKTGDEVHEHIDEGLFKRLGLPEWLIADTRETYIECALRLAENHQERLELRRYIIENNGLQKLFTGDPRPLGKILLKKTNEWKRKHLSKK

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Crispr_ID: NZ_CP031242_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031242_3

105014-105108

Orphan

Consensus_repeat	Method
CAGGAGCTGCTGCCTGTGGTGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP031242_3

>merge|NZ_CP031242|3|105014-105108|CRISPRCasFinder
CAGGAGCTGCTGCCTGTGGTGCTTGTGCAGTAGTAGCAGGAGCTGCTGCCTGTGGTGCTTGTGCGGTAGTAGCAGGAGCTGCTGTCTGTGGTGCT

>NZ_CP031242|3|3|105014-105108|CRISPRCasFinder
CAGGAGCTGCTGCCTGTGGTGCT	TGTGCAGTAGTAGCAGGAGCTGCTGCCTGTGGTGCTTGTGCGGTAGTAG
CAGGAGCTGCTGTCTGTGGTGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031242.1\|WP_005652973.1\|115527_116190_-\|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|225415
NZ_CP031242.1\|WP_042594252.1\|116287_117088_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031242.1\|WP_005667231.1\|97581_98826_-\|uracil-permease	unknown	unknown	gnl\|CDD\|273276
NZ_CP031242.1\|WP_005689530.1\|117119_118316_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182964
NZ_CP031242.1\|WP_005694297.1\|111035_112943_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP031242.1\|WP_005650140.1\|96471_96792_+\|stress-response-translation-initiation-inhibitor-YciH	unknown	unknown	gnl\|CDD\|181613
NZ_CP031242.1\|WP_005694286.1\|94558_95749_+\|lipopolysaccharide-assembly-protein-LapB	unknown	unknown	gnl\|CDD\|225504
NZ_CP031242.1\|WP_005687337.1\|108711_109170_+\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|179969
NZ_CP031242.1\|WP_005687344.1\|99679_101746_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|236138
NZ_CP031242.1\|WP_042594260.1\|94265_94559_+\|LapA-family-protein	unknown	unknown	gnl\|CDD\|226294
NZ_CP031242.1\|WP_011272712.1\|105751_108412_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP031242.1\|WP_042594257.1\|98929_99556_-\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NZ_CP031242.1\|WP_005650156.1\|101757_102300_-\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP031242.1\|WP_042594256.1\|102459_103884_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP031242.1\|WP_005650143.1\|96820_97516_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|168719
NZ_CP031242.1\|WP_042594254.1\|114253_115507_-\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP031242.1\|WP_011272710.1\|113029_114175_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|236757
NZ_CP031242.1\|WP_038441057.1\|118317_119016_-\|16S-rRNA-pseudouridine(516)-synthase-RsuA	unknown	unknown	gnl\|CDD\|236774
NZ_CP031242.1\|WP_011272711.1\|109326_110769_-\|YdgA-family-protein	unknown	unknown	gnl\|CDD\|227644
NZ_CP031242.1\|WP_005667227.1\|95772_96465_+\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695

Protein	Function_ID	Function_description	E-value
NZ_CP031242.1\|WP_005652973.1\|115527_116190_-\|trimeric-intracellular-cation-channel-family-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	7.9376e-97
NZ_CP031242.1\|WP_005667231.1\|97581_98826_-\|uracil-permease	gnl\|CDD\|273276	TIGR00801, Uric_acid_permease, uracil-xanthine permease. The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40) Most of the functionally characterized members of the NCS2 family are transporters specific for nucleobases including both purines and pyrimidines. However, two closely related rat members of the family, SVCT1 and SVCT2, localized to different tissues of the body, cotransport L-ascorbate and Na+ with a high degree of specificity and high affinity for the vitamin. The NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39). [Transport and binding proteins, Nucleosides, purines and pyrimidines].	8.32353e-137
NZ_CP031242.1\|WP_005689530.1\|117119_118316_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182964	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP031242.1\|WP_005694297.1\|111035_112943_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP031242.1\|WP_005650140.1\|96471_96792_+\|stress-response-translation-initiation-inhibitor-YciH	gnl\|CDD\|181613	PRK09019, PRK09019, stress response translation initiation inhibitor YciH.	1.7732e-58
NZ_CP031242.1\|WP_005694286.1\|94558_95749_+\|lipopolysaccharide-assembly-protein-LapB	gnl\|CDD\|225504	COG2956, COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism].	0
NZ_CP031242.1\|WP_005687337.1\|108711_109170_+\|methylglyoxal-synthase	gnl\|CDD\|179969	PRK05234, mgsA, methylglyoxal synthase; Validated.	8.28169e-91
NZ_CP031242.1\|WP_005687344.1\|99679_101746_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP031242.1\|WP_042594260.1\|94265_94559_+\|LapA-family-protein	gnl\|CDD\|226294	COG3771, COG3771, Predicted membrane protein [Function unknown].	2.4846e-37
NZ_CP031242.1\|WP_011272712.1\|105751_108412_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP031242.1\|WP_042594257.1\|98929_99556_-\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	4.36166e-133
NZ_CP031242.1\|WP_005650156.1\|101757_102300_-\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.7407e-98
NZ_CP031242.1\|WP_042594256.1\|102459_103884_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP031242.1\|WP_005650143.1\|96820_97516_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|168719	PRK06893, PRK06893, DnaA regulatory inactivator Hda.	9.5224e-149
NZ_CP031242.1\|WP_042594254.1\|114253_115507_-\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP031242.1\|WP_011272710.1\|113029_114175_+\|molecular-chaperone-DnaJ	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0
NZ_CP031242.1\|WP_038441057.1\|118317_119016_-\|16S-rRNA-pseudouridine(516)-synthase-RsuA	gnl\|CDD\|236774	PRK10839, PRK10839, 16S rRNA pseudouridine(516) synthase RsuA.	5.2642e-122
NZ_CP031242.1\|WP_011272711.1\|109326_110769_-\|YdgA-family-protein	gnl\|CDD\|227644	COG5339, COG5339, Uncharacterized protein conserved in bacteria [Function unknown].	7.84943e-114
NZ_CP031242.1\|WP_005667227.1\|95772_96465_+\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	1.77315e-142

>NZ_CP031242.1|WP_042594256.1|102459_103884_-|dihydrolipoyl-dehydrogenase
MSKEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYSTLGGVCLNVGCIPSKALLHVAKVIEEAKHANKNGIYFSEPRIELGEVRAGKEAVVAKLTGGLAGMAKARKVTVVEGLATFTDSHTLVARDRDGNPTTVKFDNAIIAAGSRPVQLPFIPHEDPRIWDSTDALKLKEVPKKLLIMGGGIIGLEMGTVYNALGSEVEVVEMFDQVIPAADKDVVGIYTKQVEKKFKLMLETKVTAVEAKDDGIYVSMEGKACNDTKRYDAVLVAIGRVPNGKLIDAGKAGVEVDDRGFIHVDKQMRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVIAGQKHYFDPKVIPSIAYTEPEVAWVGKTEKECKQEGLNYEVAKFPWAASGRAIASECSEGMTKLIFDKDTHRVLGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNAKAKKK
>NZ_CP031242.1|WP_005650156.1|101757_102300_-|adenine-phosphoribosyltransferase
MTTQLDLIKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRLNNLGVDCYTLVNFEGH
>NZ_CP031242.1|WP_005687344.1|99679_101746_-|DNA-polymerase-III-subunit-gamma/tau
MSYQVLARKWRPKTFADVVGQEHIITALANGLKDNRLHHAYLFSGTRGVGKTSIARLFAKGLNCVHGVTATPCGECENCKTIEQGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKALDETQISQHLAHILTQENIPFEEPALVKLAKAAQGSIRDSLSLTDQAIAMGDRQVTNNVVSNMLGLLDDNYSVDILYALHQGNGELLMRTLQRVADAAGDWDKLLGECAEKLHQIALMQLLPQKSSDNNEHFSFLAKHISPENVQFFYQVIVSGRKDLSNAPNRRIGAEMTLLRALAFHPKFLTAVPKANTTITPPPSTPSAVENTGNYVDVPVLSQSIKSAYSQVKPNKTSIPNLASLSALDALEHLTQLENQERQEHKAESLAVVSETLHHIQELDEEKSHKKMTALPVREMTEPKPKHIEKPTVQPNAAQAPQKNSTEENSSDDNVEIAQDEQEILSADTYRWEWSNPELAKADTGVRPSDIKQAILKDITPELRLKIITKTQQQDEWADIVERSGLTGFSKELALNCFLQSKTDDEINLGLHSEKSHLRQDRSIKNLAEALSKLQGKDIRLTINLDDSNVTTPIEYRRNIYQALREKAQNELQKDSKLQILLNEFDAKLDVESIRPV
>NZ_CP031242.1|WP_042594257.1|98929_99556_-|uracil-phosphoribosyltransferase
MKLVEVRHPLVKHKLGVMREAEIDTKKFRELATEIGSLLTYEATSDLETEKVTINGWNGPVEIDRIKGKKVTVVPILRAGLGMMDGVLEHVPSARISVVGIYRNEETLEPVPYFQKLASDLEERLSIVVDPMLATGGSMIATLDLLKAKGCKHIKVLVLVAAPEGIKALEAAHPDIELYCASIDSHLNEQGYIIPGLGDAGDKIFGTK
>NZ_CP031242.1|WP_005667231.1|97581_98826_-|uracil-permease
MTNQIPPSLAENQSKLKQSFVGLQMLFVAFGALVLVPLITGLDSNTALLTAGVGTLLFQFCTGKQVPIFLASSFAFIAPIQYGVQTWGIATTMGGLAFTGLVYFALSTLVKLRGAEALQRFFPPVVVGPVIIIIGMGLAPIAVDMSLGKNSAYAYNDAILVSMVTLLTTLSVAVFAKGLMKLIPIMFGITAGYILCLFLGLINFQPVIDAPWFSLPKLTTPEFNLEAILYMLPIAIAPAVEHVGGIMAISSVTGKDFLKKPGLHRTLLGDGVATAAASLVGGPPNTTYAEVTGAVMLTRNFNPNIMTWAAVWAIAISFCGKVGAFLSTIPTIVMGGIMMLVFGSIAVVGMSTLIRGKVDVTEARNLCIISVVMTFGIGNMFVDVGNVSIKGISLCAIVAIILNLVLPKAKNEVE
>NZ_CP031242.1|WP_005650143.1|96820_97516_-|DnaA-regulatory-inactivator-Hda
MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRAFSNEYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFNRIKASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQLNSLTDEQKIKVLQLAAYQRGFQLSDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKEILNL
>NZ_CP031242.1|WP_005650140.1|96471_96792_+|stress-response-translation-initiation-inhibitor-YciH
MSDSVLVYSTDVGRIKEEKASVARPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKKLAAELKKRCGCGGAVKNGIIEIQGEKRDLLKQLLEQKGFKVKLSGG
>NZ_CP031242.1|WP_005667227.1|95772_96465_+|orotidine-5'-phosphate-decarboxylase
MTSKIIVALDFEKEAEALALVDQIDPSLCRLKVGKEMFTTLGINFVKQLHQRNFDVFLDLKYHDIPNTVARAVRSAADLGVWMVDLHASGGLRMMEDAKKILEPYGKDAPLLIAVTVLTSMEDLDLLQIGINASPMEQVLRLAHLTQRAGLDGVVCSPQEVEILRNACGEDFKLVTPGIRPIGTDFGDQRRVMTPTAAIRAGSDYLVIGRPITQADNPAEVLRSINVSIG
>NZ_CP031242.1|WP_005694286.1|94558_95749_+|lipopolysaccharide-assembly-protein-LapB
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLDMLQKQEIENEIESHSQFEAELTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQKTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQAVKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALAKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDGRGKESLILLHKMVGERIKQTSPYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN
>NZ_CP031242.1|WP_042594260.1|94265_94559_+|LapA-family-protein
MIKYILGIVIFIAIVLVAITIGANNDQIITFNYIVAESQFQLSSLVAILFGLGLILGWLITAFFYIKLKLKNMALARQVKSQTLQINELTTTRDKVV
>NZ_CP031242.1|WP_011272712.1|105751_108412_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSEILKNDIDPIETQDWLQSLDSLIREEGVERAQYIVEQVIGQARTSGVSLPTGVTTDYVNTIPVAEQPAYPGDHAIERRIRSAVRWNAIAMVLRSQKKDLDLGGHISTFQSAATMYEVCYNHFFKAATEKNGGDLIFFQGHAAPGMYARAFLEGRLTEEQMDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLDNRGLKDTKDQKVYAFLGDGEMDEIESKGALTFAAREKLDNLIFTISCNLQRLDGPVNGNGKIVQELEGLFTGAGWEVIKVLWGSDWDKLFAKDTSGKLTQLMMEVVDGDYLTFKSKDGAYIREHFFGRYPETAALVADMTDDEIWALRRGAHDSEKLYAAYAKAQNATKPVVILAHQVKGYKIPEAESKNTAHQSKKMSYESLKGFRDFFELPLTDEQVEKLEYIKFAEGTPEYEYLHGHRKALNGYVPARRTKFDVEYKVPALEEFKALLEEQPRGISTTMAFTRALNILLKDKNIGKTIVPMIADEARTFGMEGLFRQVGIYNPHGQNYVPSDRDLVAYYREAKDGQVLQEGINELGATASWLAAANSYSVNNQPMIPFFIYYSMFGFQRVGDMMWAAGDQLARGFMVGGTSGRTTLNGEGLQHEDGHSHIQAGVIPNCVTYDPSFAFEVAVIMQDGINRMYGEKQEDVFYYMTTLNEVMDQPAMPAGAEEGIRKGLYKFETVEGKKGKGHVQLLGSGAIMRHVREAAQILANDYGVTSDVFSAPSFNELAREGHDAARWNLLHPTETQRVPYVAQVLADLPTVASTDYVKGYADQIRAFVPSKHYHVLGTDGFGRSDSRANLREHFEVDARYVVVAALSQLAKEGTVSNQVVADAIAKFGLNVDRINPLYA
>NZ_CP031242.1|WP_005687337.1|108711_109170_+|methylglyoxal-synthase
MQTTTRTLTQHKRIALVAHDSCKKNLLNWTQKHKEALKPHILYATGTTGHILERETGLSIQSLLSGPMGGDQQLGGLIAEKKIDMMIFFWDPMNAAPHDPDVKALMRIATVWNIPVAINQSSADFLLTSVLFEQDVEIDVPDYEGYLKERLA
>NZ_CP031242.1|WP_011272711.1|109326_110769_-|YdgA-family-protein
MKKSKIAAGVVISLAAVWCAGAWFTGKKAEEEYLHQLKQLNQLFTKTEALEESKIFYKNIKFERGLFASHIQDQIEIHKANETIIIPLSSTLYHGPLPLDRVAKLNFVPAIFSSQTLLGKNATTQAFFDITESEKPLQLNFAMNYSLSGNAELKLASGQYHNEQSKTDFDWSNVVLNIDLNQNTPNNYVLSVDTFNSNAPNHAVSTASSIKIKDLVVQGSLQSTKWPFIYSGNINSKIGYFEQNTESPETGEKFSLIQKNSQANLTTQVEGDTVNIINKTNLDELHINGNNLGKVTNNVEFNHIDGNALQELLNILVAIGKADSDMPLSKTLVQKLQQAGMIIANNQPQIKFTPLSISDEKGKVALDLNIALVPNPKFDLMRSGLYKQFKDFSINFDVNKETAISLLSKFVPENQKQDFVHRLNELVTEGEVNDIIVNTDKTVTLTLALENNDLKLNGKPIPEEQLKVVLFILVMGGFGR
>NZ_CP031242.1|WP_005694297.1|111035_112943_+|molecular-chaperone-DnaK
MGKIIGIDLGTTNSCVAVMDGDKARVIENAEGARTTPSIIAYTDNETLVGQPAKRQAITNPKNTLFAIKRLIGRRFESEEVQRDIKIMPFEITRADNGDAWVNVKGDKLAPPQISAEVLKKMKKTAEDFLGESVTEAVITVPAYFNDAQRQATIDAGKIAGLDVKRIINEPTAAALAFGLGSSKENQVIAVYDLGGGTFDISIIEIDNFDGEQTFEVLATGGNTHLGGEDFDNRVIDYIIDEFKKEQNIDLRNDAMALQRVKEAAEKAKIELSSAQSTEVNLPYITADATGPKHLALNITRAKLEALVEDLVASSIESLKAVLKDADKGVSEIHDIILVGGQTRMPLVQQKVAEFFGKEARKDVNPDEAVAIGAAVQGGVLKGDVKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSGLSDEEIQQMVRDAEANADADRKFEEVVQARNQADGIAHATRKQIAEAGDALSVADKEKIEAAVAELETAAKGEDKAEIEAKIEAVIKASEPLMQAVQAKAQQAGGEQPQQSSAKDDGVVDAEFEEVKDNK
>NZ_CP031242.1|WP_011272710.1|113029_114175_+|molecular-chaperone-DnaJ
MAKKDYYEVLGLQKGASEDDIKRAYKRLASKHHPDKNQGSKEAEEKFKEINEAYEVLGDDQKRAAYDQYGHAAFEQGGGTGGFGGGFGGADFGDMFGDIFGDIFGGGRGRQRVVRGEDLRYDLEISLEEAVKGTTKDIQINTLAHCDSCGGSGAEKGSKVETCPHCHGSGRIRRQQGFFVSESICPTCHGSGKKIEKPCRSCHGEGRVHKKENLSVKIPAGVDTGNQLRLAGKGAAGENGAPAGDLYVVIHVREHNIFERDGSNLYCEVPISFATAALGGEIEVPTLDGRVKLKIPAETQTGKLFRMRGKGVASTRSGYAGDLICRIVVETPVNLTSEQKELLHKLEESLQGKDLSKHAPKSSGFLDGVKKFFDNLGKSDK
>NZ_CP031242.1|WP_042594254.1|114253_115507_-|glutamate-5-semialdehyde-dehydrogenase
MLEQMGKQAKDAAFILAQLTTAEKNCALSIIAEQLQQQAPLILAENAKDIELAKQNGLSDALIDRLLLTQERLQSIANDVRHVISLADPVGKIIDGGTLDSGLKIERVRTPLGVIGTIYEARPNVTIDVASLCLKTGNAVILRGGKETQFSNKILIEVVQNALEQAGLPKFAVQAITDPNRELVMQLLKLDRYVDMIIPRGGSGLHELCKQHSTIPVIVGGVGVCHTFVEKSADQNKAIFVIDNAKTQRPSTCNTLETLLVQHSIAEEFLPKLVSHLATKNVKYHAKSTALNILKQAGANVCEVTEKELRKEWGSLDFNVVVVEDIHAAIEHIRQYGTQHSESILTSSQNLARQFINQVDAAAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTSYKWVCEGEYTVRK
>NZ_CP031242.1|WP_005652973.1|115527_116190_-|trimeric-intracellular-cation-channel-family-protein
MLLSILYIIGITAEGMTGALAAGREKMDIFGVIIIASVTAIGGGSVRDVLLGHYPLGWVKHPEYFLMVASAAVITVYVAPFINHFMRYFRTIFLVLDAMGLVVYSIIGAQIAMDMGHSLTIVCIAGCITGAFGGVLRDMLCNRIPLVFQKELYASIALFATLTYYALSTLQVEHTLAVLLTLISSFTLRLLAIHFEWGLPVFNYQELTSEEQDKLPNKKK
>NZ_CP031242.1|WP_042594252.1|116287_117088_+|hypothetical-protein
MSEQSSKYIAALLAVLSISMVLGIDLFIFSLQSEKQTMPHLGVGVLVAQLISLLVFYRGEICPGQRGRLIKVNMTFAIYWAVWLLISLLQNNHTLTNVMSVCGLSVVYFIWKQPKTEKIRNSFLLMAALIAGLGCLSYLMIFTVLPASDFAEYNPFVPILSGVILANLALVIARNRLQGFIALLPLAMIILLALNALAMFLFLLLNGMESAVNSDSVFAYIIYFVCHFVIAAILILHSFQKWILSTNSLFILLFIAVCLPLWMVFV
>NZ_CP031242.1|WP_005689530.1|117119_118316_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MNQQKSTFIFILTLGILSMLPPFGVDMYLPSFLEIAKDLGVSPEQVQHTLTSFAYGMAFGQLFWGPFGDSFGRKPIILLGVIVGALTALVLTEINSVGNFTALRFVQGFFGAAPVVLSGALLRDLFSKDQLSKVMSTITLVFMLAPLVAPIIGGYIVKFFHWHAIFYVISLVGLLAAALVFFIIPETHKKENRIPLRLNIIARNFLLLWKQKEVLGYMFAASFSFGGLFAFVTAGSIVYIGIYGVPVDQFGYFFMMNIVTMIFASFLNSRFVTKVGAETMLRIALAIQFLSGMWLILTALLDLGFWPMAIGVAFFVGPNPVISSNAMASALEKCPQMAGTTNSLIGSVRFAVGAIMGSLVASMKMDTAAPMLFTMGACVVISVLAYYFLTSRNLKSRG
>NZ_CP031242.1|WP_038441057.1|118317_119016_-|16S-rRNA-pseudouridine(516)-synthase-RsuA
MRLDKFIAENTGLTRSQATKAIRQSAVKINGEIVKSGAVQISQEDKIYFEDELLTWVEEGQYFMLHKPQGCVCSNDDGDYPTIYQFFDYPLAGKLHSAGRLDVDTTGFVLLTDDGQWSHRITSPKHHCEKTYLVTLADPVEENYAAACSEGILLRGEKEPTKPAKLEILDDYNVNLTISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIEKLVK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP031242_3	3.1\|105037\|49\|NZ_CP031242\|CRISPRCasFinder	105037-105085	49	NZ_CP031242.1	105001-105049	2	0.959

1. spacer 3.1|105037|49|NZ_CP031242|CRISPRCasFinder matches to position: 105001-105049, mismatch: 2, identity: 0.959

tgtgcagtagtagcaggagctgctgcctgtggtgcttgtgcggtagtag	CRISPR spacer
tgtgcagtagtatcaggagctgctgcctgtggtgcttgtgcagtagtag	Protospacer
************ ****************************.*******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

131831 : 221697

Mannheimia_phage(40.62%)

lysis,plate,portal,tail,tRNA,capsid,terminase,head,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011961904.1\|131831_133802_+\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
WP_011272700.1\|133798_133972_+	DUF5363 domain-containing protein	NA	NA	NA	NA
WP_011961905.1\|134073_137514_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_011272698.1\|137566_138958_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	7.2e-23	31.2
WP_005694317.1\|139151_140042_+	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
WP_038441072.1\|140043_141348_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_005689857.1\|141635_142316_-	vancomycin high temperature exclusion protein	NA	NA	NA	NA
WP_005689855.1\|142473_143550_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_005689853.1\|143604_146247_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	2.1e-103	32.3
WP_005687300.1\|146413_148177_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_005687298.1\|148313_148790_-	hypothetical protein	NA	NA	NA	NA
WP_042594248.1\|149025_149832_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_005659609.1\|149883_150585_+	hydroxyacylglutathione hydrolase	A0A1X9I5D3	Streptococcus_phage	3.3e-08	29.1
WP_005659606.1\|150628_151489_-	SAM-dependent methyltransferase TehB	NA	NA	NA	NA
WP_042593951.1\|151601_153650_-\|tRNA	methionine--tRNA ligase	A0A2K9V939	Bandra_megavirus	2.2e-60	29.3
WP_042593952.1\|153800_154913_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_042593953.1\|154959_155622_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_042593954.1\|155735_156410_+	acylneuraminate cytidylyltransferase	NA	NA	NA	NA
WP_154231901.1\|156481_156637_+	hypothetical protein	NA	NA	NA	NA
WP_011272688.1\|157118_158129_-\|portal	phage portal protein	Q19UT6	Mannheimia_phage	1.8e-116	60.4
WP_038441084.1\|158138_159920_-\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	5.0e-218	65.4
WP_042594246.1\|160084_160900_+\|capsid	GPO family capsid scaffolding protein	A0A0M3LNM2	Mannheimia_phage	6.9e-66	60.5
WP_005668475.1\|160920_161970_+\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	4.4e-89	51.6
WP_011272685.1\|161981_162632_+\|terminase	terminase	Q19US0	Mannheimia_phage	4.1e-45	46.0
WP_042594245.1\|162925_163432_+\|head	head completion/stabilization protein	A0A0M3LNL8	Mannheimia_phage	2.8e-33	51.0
WP_005668467.1\|163431_163641_+\|tail	tail protein	NA	NA	NA	NA
WP_005668464.1\|163642_163864_+	hypothetical protein	NA	NA	NA	NA
WP_042594244.1\|163856_164375_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	1.1e-35	46.0
WP_011272684.1\|164359_164710_+	chemotaxis protein	NA	NA	NA	NA
WP_005672208.1\|164884_165100_+	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	1.1e-10	47.9
WP_038441089.1\|165324_165795_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	7.3e-28	45.3
WP_011272680.1\|165794_166256_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	5.7e-25	48.2
WP_005653079.1\|166256_166604_-	hypothetical protein	NA	NA	NA	NA
WP_011272679.1\|166707_166890_+	hypothetical protein	Q19UR2	Mannheimia_phage	8.8e-06	47.8
WP_011272678.1\|166900_167239_-	hypothetical protein	NA	NA	NA	NA
WP_075913143.1\|167314_167488_+	hypothetical protein	Q19UR2	Mannheimia_phage	3.2e-05	53.3
WP_042593957.1\|167465_167726_-	hypothetical protein	NA	NA	NA	NA
WP_006995348.1\|170790_171243_+	hypothetical protein	NA	NA	NA	NA
WP_011272674.1\|171340_171898_+	hypothetical protein	NA	NA	NA	NA
WP_005653088.1\|171906_172335_+	hypothetical protein	NA	NA	NA	NA
WP_011272673.1\|172438_173038_+\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	4.2e-44	66.0
WP_005633786.1\|173039_173378_+	hypothetical protein	Q19UQ6	Mannheimia_phage	3.4e-19	56.6
WP_011272672.1\|173374_174289_+\|plate	baseplate assembly protein	Q19UQ5	Mannheimia_phage	5.1e-94	59.5
WP_011272671.1\|174278_174815_+\|tail	phage tail protein I	M1T2R2	Escherichia_phage	1.6e-50	52.5
WP_042594609.1\|174823_177346_+\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	1.1e-255	69.3
WP_042594610.1\|177357_177957_+	hypothetical protein	Q94MX9	Haemophilus_virus	1.3e-90	88.0
WP_011272668.1\|177953_178457_+	hypothetical protein	F6MIM0	Haemophilus_phage	1.7e-51	63.6
WP_011272667.1\|178513_179335_+	hypothetical protein	NA	NA	NA	NA
WP_042594611.1\|179348_179717_+	hypothetical protein	NA	NA	NA	NA
WP_038441454.1\|179733_180873_+	hypothetical protein	NA	NA	NA	NA
WP_011272665.1\|180882_181410_+	hypothetical protein	NA	NA	NA	NA
WP_011272664.1\|181413_182178_+	hypothetical protein	NA	NA	NA	NA
WP_005650281.1\|183838_184294_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_005691699.1\|184310_185798_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_042594613.1\|185809_188299_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.5e-28	26.0
WP_042594615.1\|188377_191560_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	3.3e-79	31.0
WP_042594618.1\|192008_192218_-	hypothetical protein	NA	NA	NA	NA
WP_042611785.1\|192465_193317_-	FRG domain-containing protein	NA	NA	NA	NA
WP_042594621.1\|193318_194704_-	restriction endonuclease HindVIIP subunit S	NA	NA	NA	NA
WP_162816776.1\|196309_196462_+	hypothetical protein	NA	NA	NA	NA
WP_005628626.1\|196532_196919_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_042593908.1\|198059_199184_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_042593909.1\|199216_200056_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	1.0e-40	39.3
WP_011272655.1\|200099_200897_-	Zn-ribbon-containing protein	NA	NA	NA	NA
WP_005631781.1\|200887_201268_-	SufE family protein	NA	NA	NA	NA
WP_011272654.1\|201264_202464_-	cysteine desulfurase	Q2XUY6	environmental_halophage	2.0e-61	32.0
WP_032827530.1\|202465_202948_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	3.8e-32	48.4
WP_005650310.1\|203062_203485_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_005659557.1\|203503_204199_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_005659555.1\|204291_205677_+	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA
WP_011272652.1\|205770_207714_+	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.6e-52	29.8
WP_005688477.1\|207794_208877_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_005650699.1\|209006_209777_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
WP_042594625.1\|209776_210637_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	5.8e-15	29.0
WP_011962024.1\|210620_211739_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	1.9e-29	37.1
WP_042594628.1\|212034_213273_+	peptidase T	NA	NA	NA	NA
WP_005650692.1\|213741_214224_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_042594630.1\|214497_215376_+	cytidine deaminase	NA	NA	NA	NA
WP_042594633.1\|215419_216385_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_042594635.1\|216381_217896_-	sodium/proline symporter PutP	NA	NA	NA	NA
WP_042594637.1\|218011_219487_+	ribonuclease G	NA	NA	NA	NA
WP_042594056.1\|220026_221697_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	2.0e-253	76.3

DBSCAN-SWA_2

266810 : 278805

Acinetobacter_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005653946.1\|266810_267830_-	phosphate ABC transporter substrate-binding protein PstS	A0A222YW41	Synechococcus_phage	1.2e-51	40.5
WP_005650594.1\|268332_268821_+	non-heme ferritin	NA	NA	NA	NA
WP_005656740.1\|268836_269334_+	non-heme ferritin	NA	NA	NA	NA
WP_005688459.1\|269590_270355_+	glycosyltransferase	A7IW34	Paramecium_bursaria_Chlorella_virus	1.5e-14	29.1
WP_005687196.1\|270456_272013_+	anthranilate synthase component I	A0A0B5J984	Pandoravirus	2.4e-22	33.2
WP_005687195.1\|272025_272613_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.2e-34	40.0
WP_005662273.1\|272661_273048_+	tautomerase family protein	NA	NA	NA	NA
WP_005687194.1\|273100_274102_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	4.4e-46	39.6
WP_005688455.1\|274142_275573_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.2e-33	38.0
WP_005659477.1\|275634_275907_+	hydrogenase maturation factor HybG	NA	NA	NA	NA
WP_042594656.1\|275940_278805_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.9e-148	37.3

DBSCAN-SWA_3

286869 : 325059

Haemophilus_phage(33.33%)

integrase,tRNA,capsid,terminase,holin,protease

attL 292842:292857|attR 314069:314084

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005650554.1\|286869_287046_-	DUF2213 domain-containing protein	Q7Y5U2	Haemophilus_phage	8.5e-22	93.1
WP_075913359.1\|287186_288497_-\|capsid	minor capsid protein	Q7Y5U5	Haemophilus_phage	5.3e-108	78.3
WP_011272621.1\|288396_289731_-	DUF1073 domain-containing protein	Q7Y5U6	Haemophilus_phage	2.1e-213	84.2
WP_011272620.1\|289732_291076_-\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	2.8e-125	54.4
WP_011272619.1\|291062_291575_-\|terminase	terminase small subunit	A0A1X9SFE5	Acinetobacter_phage	1.0e-19	39.2
WP_011272618.1\|291619_291898_+	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	6.5e-16	66.2
WP_005693951.1\|291899_292181_-	hypothetical protein	Q776X1	Haemophilus_phage	9.4e-31	73.3
WP_011272617.1\|292092_292416_-	DUF2570 family protein	Q7Y5U9	Haemophilus_phage	7.8e-21	54.6
WP_042594666.1\|292408_293011_-	glycoside hydrolase family 19 protein	Q7Y5V0	Haemophilus_phage	9.6e-57	54.4
292842:292857	attL	NA	NA	NA	NA
WP_005650535.1\|292979_293336_-\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_038441183.1\|293672_294341_-	hypothetical protein	D0UIM5	Aggregatibacter_phage	6.7e-67	62.3
WP_005666914.1\|294698_295664_+	hypothetical protein	Q8HA04	Enterobacteria_phage	1.2e-88	58.8
WP_005650528.1\|295713_296085_-	hypothetical protein	NA	NA	NA	NA
WP_038441185.1\|296115_296781_-	HNH endonuclease	A0A2I7QND8	Vibrio_phage	2.2e-38	42.8
WP_005650522.1\|297417_297837_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	1.9e-56	75.4
WP_005650520.1\|297873_298098_-	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
WP_005650518.1\|298094_298715_-	replication P	A0A0M3LS65	Mannheimia_phage	1.9e-28	39.1
WP_042594521.1\|298711_299434_-	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	4.1e-62	68.8
WP_042594522.1\|299430_300099_-	antirepressor	D0UIL6	Aggregatibacter_phage	2.2e-54	51.7
WP_042594523.1\|300145_300586_-	hypothetical protein	K7PJS5	Enterobacterial_phage	1.8e-12	30.3
WP_005650512.1\|300634_300823_-	DNA-binding protein	Q7Y5W4	Haemophilus_phage	6.5e-28	93.5
WP_005650509.1\|300933_301632_+	helix-turn-helix transcriptional regulator	Q7Y5W5	Haemophilus_phage	1.4e-112	84.5
WP_011272604.1\|301683_302763_+	hypothetical protein	NA	NA	NA	NA
WP_005666912.1\|302765_303101_+	STAS-like domain-containing protein	A0A2H4J4X6	uncultured_Caudovirales_phage	8.1e-13	41.5
WP_005650502.1\|303825_303996_-	DUF1508 domain-containing protein	NA	NA	NA	NA
WP_005650500.1\|304010_304232_+	hypothetical protein	NA	NA	NA	NA
WP_005650497.1\|304695_304899_-	hypothetical protein	NA	NA	NA	NA
WP_005666905.1\|305499_306771_+	hypothetical protein	NA	NA	NA	NA
WP_005656636.1\|307108_307360_+	phage antirepressor Ant	A0A0M3LQ72	Mannheimia_phage	2.5e-27	69.1
WP_005656629.1\|307939_308359_-\|integrase	tyrosine-type recombinase/integrase	A0A0M3LQN1	Mannheimia_phage	9.4e-19	72.1
WP_005656627.1\|308931_309705_+	FNR family transcription factor	NA	NA	NA	NA
WP_005656626.1\|309826_310756_+	universal stress protein UspE	NA	NA	NA	NA
WP_005662334.1\|310953_311790_+	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_005652713.1\|311873_312512_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.3e-27	38.9
WP_005687142.1\|312566_313601_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SCX2	Cyanophage	8.7e-74	43.6
WP_005687141.1\|313780_314539_+	SDR family oxidoreductase	NA	NA	NA	NA
314069:314084	attR	NA	NA	NA	NA
WP_005687140.1\|314555_315749_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_005687139.1\|315748_316555_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_005660359.1\|316698_317652_-	oxidoreductase	NA	NA	NA	NA
WP_005631703.1\|317710_318187_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_005652728.1\|318325_318544_-	cold shock domain-containing protein CspD	Q9AZD3	Lactococcus_phage	1.4e-10	51.6
WP_005656618.1\|318692_318851_-	YoaH family protein	NA	NA	NA	NA
WP_005656617.1\|318843_319563_-\|tRNA	tRNA pseudouridine(65) synthase TruC	NA	NA	NA	NA
WP_005656616.1\|319556_319877_-	YqcC family protein	NA	NA	NA	NA
WP_005656615.1\|319891_321349_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_005656614.1\|321507_321762_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_005656611.1\|321761_322652_+	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA
WP_005656609.1\|322693_324571_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_005650453.1\|324606_325059_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	2.5e-25	56.1

DBSCAN-SWA_4

542359 : 550868

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011272434.1\|542359_543043_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.3e-54	50.7
WP_011272433.1\|543035_543461_+	6-carboxytetrahydropterin synthase QueD	A0A1U9WRB3	Streptococcus_virus	2.3e-20	42.0
WP_005686506.1\|543461_544097_+	7-carboxy-7-deazaguanine synthase QueE	S4TZT1	uncultured_phage	8.7e-16	30.3
WP_042594456.1\|544706_546887_+	DNA helicase II	A7KV33	Bacillus_phage	5.1e-116	37.6
WP_005647473.1\|546976_547978_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_005653671.1\|547992_548880_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_005694258.1\|548889_549882_+	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.0e-14	30.8
WP_042594455.1\|549884_550868_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-20	33.2

DBSCAN-SWA_5

677810 : 686879

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042594423.1\|677810_679655_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	2.1e-22	29.3
WP_014550949.1\|679779_680058_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_005656013.1\|680066_680429_-	membrane protein	NA	NA	NA	NA
WP_014550950.1\|680403_681513_-	transglutaminase family protein	NA	NA	NA	NA
WP_042594422.1\|681766_684187_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	1.1e-223	50.4
WP_042594421.1\|684197_684815_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.4e-73	57.3
WP_012054524.1\|684816_685656_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.5e-18	31.6
WP_005686307.1\|685767_686379_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	2.3e-21	32.5
WP_005656004.1\|686378_686879_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	3.2e-13	32.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP031242

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection