CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP022677	Bacillus megaterium strain SR7 plasmid p3, complete sequence	0 crisprs	NA	0
NZ_CP022674	Bacillus megaterium strain SR7 chromosome, complete genome	3 crisprs	csa3,DinG,cas3,DEDDh,WYL	6
NZ_CP022678	Bacillus megaterium strain SR7 plasmid p4, complete sequence	0 crisprs	NA	0
NZ_CP022676	Bacillus megaterium strain SR7 plasmid p2, complete sequence	0 crisprs	NA	0
NZ_CP022675	Bacillus megaterium strain SR7 plasmid p1, complete sequence	0 crisprs	NA	0
NZ_CP022679	Bacillus megaterium strain SR7 plasmid p5, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022674_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022674_1

408193-408290

Orphan

Consensus_repeat	Method
ATGTGTAACTATAATGGTTACAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022674_1

>merge|NZ_CP022674|1|408193-408290|CRISPRCasFinder
ATGTGTAACTATAATGGTTACAACGAGCTGAGAAGAATTAGCAGTGCTATAAAAAGCTCAAATTTTTTTGTGTTATATGTAACTATAATGGTTACAAC

>NZ_CP022674|1|1|408193-408290|CRISPRCasFinder
ATGTGTAACTATAATGGTTACAAC	GAGCTGAGAAGAATTAGCAGTGCTATAAAAAGCTCAAATTTTTTTGTGTT
ATATGTAACTATAATGGTTACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022674.1\|WP_114894337.1\|412350_412962_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP022674.1\|WP_013055689.1\|407691_407889_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP022674.1\|WP_114894328.1\|393943_395692_-\|allophanate-hydrolase	unknown	unknown	gnl\|CDD\|236177
NZ_CP022674.1\|WP_114894339.1\|414325_414532_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022674.1\|WP_114894333.1\|405056_406784_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374899
NZ_CP022674.1\|WP_071276597.1\|399334_399988_-\|DUF1989-domain-containing-protein	unknown	unknown	gnl\|CDD\|132465
NZ_CP022674.1\|WP_114894329.1\|395706_399318_-\|urea-carboxylase	unknown	unknown	gnl\|CDD\|274264
NZ_CP022674.1\|WP_114894327.1\|393217_393826_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|378149
NZ_CP022674.1\|WP_114894335.1\|409116_410103_+\|gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP022674.1\|WP_114894331.1\|401021_402371_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP022674.1\|WP_114894340.1\|414715_415429_-\|DUF4386-domain-containing-protein	unknown	unknown	gnl\|CDD\|379558
NZ_CP022674.1\|WP_114894341.1\|415741_416998_-\|alkaline-phosphatase	unknown	unknown	gnl\|CDD\|293736
NZ_CP022674.1\|WP_114894330.1\|400008_400746_-\|urea-carboxylase-associated-family-protein	unknown	unknown	gnl\|CDD\|163257
NZ_CP022674.1\|WP_013055693.1\|411374_411818_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP022674.1\|WP_057241531.1\|406780_407575_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP022674.1\|WP_114894332.1\|403358_404687_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|238618
NZ_CP022674.1\|WP_114894336.1\|410715_411258_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239313
NZ_CP022674.1\|WP_114894338.1\|413105_413333_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184493
NZ_CP022674.1\|WP_114894334.1\|408313_408946_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225462
NZ_CP022674.1\|WP_013055696.1\|412954_413101_+\|YvrJ-family-protein	unknown	unknown	gnl\|CDD\|378969

Protein	Function_ID	Function_description	E-value
NZ_CP022674.1\|WP_114894337.1\|412350_412962_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	5.77341e-10
NZ_CP022674.1\|WP_013055689.1\|407691_407889_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	8.42897e-30
NZ_CP022674.1\|WP_114894328.1\|393943_395692_-\|allophanate-hydrolase	gnl\|CDD\|236177	PRK08186, PRK08186, allophanate hydrolase; Provisional.	0
NZ_CP022674.1\|WP_114894333.1\|405056_406784_-\|hypothetical-protein	gnl\|CDD\|374899	pfam16949, ABC_tran_2, Putative ATP-binding cassette. This is a family of putative two component ABC exporters. This is the membrane protein of approximately 573 residues and twelve transmembrane domains. It is encoded adjacent to an ATPase.	2.89441e-16
NZ_CP022674.1\|WP_071276597.1\|399334_399988_-\|DUF1989-domain-containing-protein	gnl\|CDD\|132465	TIGR03424, urea_degr_1, urea carboxylase-associated protein 1. A number of bacteria degrade urea as a nitrogen source by the urea carboxylase/allophanate hydrolase pathway, which uses biotin and consumes ATP, rather than my means of the nickel-dependent enzyme urease. This model represents one of a pair of homologous, tandem uncharacterized genes found together with the urea carboxylase and allophanate hydrolase genes.	1.59278e-119
NZ_CP022674.1\|WP_114894329.1\|395706_399318_-\|urea-carboxylase	gnl\|CDD\|274264	TIGR02712, Includes:_Allophanate_hydrolase, urea carboxylase. Members of this family are ATP-dependent urea carboxylase, including characterized members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae. The allophanate hydrolase domain of the yeast enzyme is not included in this model and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from Oleomonas sagaranensis was shown to be highly active on acetamide and formamide as well as urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP022674.1\|WP_114894327.1\|393217_393826_+\|DedA-family-protein	gnl\|CDD\|378149	pfam09335, VTT, VMP1, TMEM41, and TVP38 (VTT) domain. The VTT domain was previously called the SNARE-associated domain, but was renamed as there seems to be no evidence for association with SNARE proteins.	6.92672e-12
NZ_CP022674.1\|WP_114894335.1\|409116_410103_+\|gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.03857e-64
NZ_CP022674.1\|WP_114894331.1\|401021_402371_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.6305e-40
NZ_CP022674.1\|WP_114894340.1\|414715_415429_-\|DUF4386-domain-containing-protein	gnl\|CDD\|379558	pfam14329, DUF4386, Domain of unknown function (DUF4386). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 214 and 245 amino acids in length.	6.92171e-45
NZ_CP022674.1\|WP_114894341.1\|415741_416998_-\|alkaline-phosphatase	gnl\|CDD\|293736	cd16012, ALP, Alkaline Phosphatase. Alkaline phosphatases are non-specific membrane-bound phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Mammalian alkaline phosphatase is divided into four isozymes depending upon the site of tissue expression. They are Intestinal ALP, Placental ALP, Germ cell ALP and tissue nonspecific alkaline phosphatase or liver/bone/kidney (L/B/K) ALP.	8.76714e-116
NZ_CP022674.1\|WP_114894330.1\|400008_400746_-\|urea-carboxylase-associated-family-protein	gnl\|CDD\|163257	TIGR03425, urea_degr_2, urea carboxylase-associated protein 2. A number of bacteria degrade urea as a nitrogen source by the urea carboxylase/allophanate hydrolase pathway, which uses biotin and consumes ATP, rather than my means of the nickel-dependent enzyme urease. This model represents one of a pair of homologous, tandem uncharacterized genes found together with the urea carboxylase and allophanate hydrolase genes.	1.42479e-111
NZ_CP022674.1\|WP_013055693.1\|411374_411818_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	5.95691e-24
NZ_CP022674.1\|WP_057241531.1\|406780_407575_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	6.38705e-102
NZ_CP022674.1\|WP_114894332.1\|403358_404687_+\|amidohydrolase	gnl\|CDD\|238618	cd01293, Bact_CD, Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.	3.14373e-110
NZ_CP022674.1\|WP_114894336.1\|410715_411258_+\|peroxiredoxin	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	3.35926e-107
NZ_CP022674.1\|WP_114894338.1\|413105_413333_+\|hypothetical-protein	gnl\|CDD\|184493	PRK14082, PRK14082, hypothetical protein; Provisional.	1.8531e-08
NZ_CP022674.1\|WP_114894334.1\|408313_408946_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	7.26322e-84
NZ_CP022674.1\|WP_013055696.1\|412954_413101_+\|YvrJ-family-protein	gnl\|CDD\|378969	pfam12841, YvrJ, YvrJ protein family. This family of short proteins are related to B. subtilis YvrJ protein. None of the members of this family have been functionally characterized.	8.32281e-10

>NZ_CP022674.1|WP_013055689.1|407691_407889_-|cold-shock-protein
MVQGKVKWFNAEKGFGFIEVEGQDDVFVHFSAIQGEGFKSLEEGQEVTFEIEDGARGPQAANVQK
>NZ_CP022674.1|WP_057241531.1|406780_407575_-|ABC-transporter-ATP-binding-protein
MRRIKMHSISLSNVSKSYGSYKAVKNINLTVETGELFGFLGPNGAGKTTTIKMMTGLLEPSSGSINVCGINVWESPVEAKQKIAYVPDQPTLYLKLTGMEYLQFVASIFKLSADEFEKRSTKWLHLFQLEERAHELIEGYSHGMKQKIALCGALLHNPKIIFLDEPTVGLDPKSARTLKNLLRTLCDNGVTVFITTHILEIAEQLCDRIGIILDGEVIALGSMKELREQANNNQSSLEDIFLDLTGNEEQQNIIEELAKAGENQ
>NZ_CP022674.1|WP_114894333.1|405056_406784_-|hypothetical-protein
MMKLLLQTEGKLLLNHVKSSKKQAYATIGFSTLFIALIVYFLSKGVWNVAPSLSFETVSSLFSYSCLLLMGMLVLMGIPQVFKNLYSSLDLSFLFTMPIPTKQLFWVKYIKSFLSTPLIMFFLFYIPLIVYGIRVHAHFLFYIISLAVLLSTAVIGLSICYLLNLLLVQLIPAQRANELMTAMSALSGVIVYVLFQLPNFSSNGAPFEKAITALPLFPNWTPFYWASTAITSSAKGSVHAFLPALSIMGLAFLSMLLSSFLVEKGFRTGWVRLSEGKVKKRAKISSSKKYRVHHPVMVIGLTDWKNIKRDLREWLVFMPFVFFLIFPTIGFLKSGATLENIISYKDNVWLGVQVFFLFFHALFNGSMSASSIAREAETAPLIKSLPISSWQLALGKLWISWLLPFILLSTIEIVLGLFIHWSAVQIISGILLKGILTIGISSIGIWLGTIGAKHNPNNPQNRLTFGVSILLAILAYVYLFIALIPFALLNLPSSFKVFADELAGSGFIGFIAGLVSDLLSFKMAHPAITYLIGIALIIIFSVGIAFLMLKLSTIRLKKGIRVAKVQSRSNLGRQS
>NZ_CP022674.1|WP_114894332.1|403358_404687_+|amidohydrolase
MLLHLINVRLPIMHDHALFEVKISNGMYTSIVLQNGYLEGDEFFPLHAAVLGKETSLDAQGRVLLPGFVDMHMHLDKAHSLPQVPNLSGTLQEAIKNYSSSLPAFPEEEIKQRMLKTALQALANGTTTIRTHIDFDCSMEEDSLFRSLQAAVEVRDELSPYMDVQVVPLFSNLDIDDMHKMNKIERAFDLEIDAIGGCPHLAGNPEKEIDALFSLAQAYNKPLDLHVDESDDPSVDTIINIAHRTIELNMEGKVVVGHLCSLAGMKEAKVKEILNLLKQAKIGVVTLPASNLYLQGREDKGIVRRGVTRIRDIQKAAIPIATASDNVDDPFHPFGKADLLQVGLLTAYAAHMGSPDDQRQLLRMITSIPARLIGKEKYGVEEGNEANFVLLNVQSVQEIWTELPETRFVFNKHRWLSVKETHQRLADANLTNLWQENQILIG
>NZ_CP022674.1|WP_114894331.1|401021_402371_-|amino-acid-permease
MNNQPALSKSLKVYQIVFLGLAWMTPMIFFTVYGVAYDAAGGQMVLAYLIAFLAIFFTAYSYSRMVKAYPIAGSAYTYTKKAIHPRLGFLVGWALLLDYIFSPIIAILTFGIFMHTEFPSIPVYVWVIVMNIILALVNIVGIKSVARISGISVVVQILFISLFCLFIIKDIATGQTSSSTLFSLHPFLASDVPFTTIFSGAALICFCFLGFDAVTTMAEETIQPERTIPKAIFLIVCIAAVMYIAISYFTQIAYPGFTFTNPDNAAYTLVKLVGGNLLSSLFITVLIIATFTQGVSSVTSVTRFLYALGRESVLPQKVFSYIHPTFKTPVVNILLVTAFSFLGMFIDLNTAVTFVSFGALTAFTFVNLSVIAHFYIKLKKRSFTETILYLIFPLIGAAFIGWLLTLLNKNTLLIGVAWLTVGFLYLFVKSRLSAPFVKRDHSKMTVPEK
>NZ_CP022674.1|WP_114894330.1|400008_400746_-|urea-carboxylase-associated-family-protein
MSYIWKQTIPAGGKWSGRIGRGKSVTFTAQESGANVSLLLYNVYDLTERYNMPDTLKAQHTAHLTKGHVLMSDNGRAFASITADTTGWHDTISGYTTRSLTHQKYGASTYQESRNEWRRNGEENFSMELLRNGLTTRDLVPNLNLFSKVYCDEEGNMNFVSSHCKKGDFITLRTEMDLLFLLSNTPNPLDPSGTYPSVPIEITVDEAAPVNSDDYCLNFRSENKRAFENTCSYDLLLGNKTLSTI
>NZ_CP022674.1|WP_071276597.1|399334_399988_-|DUF1989-domain-containing-protein
MAVFNRVESNRKIENAIYDETVLAGDGWMHELKPGQTLRIIDVEGNQAADTLFFDAENPEDHYSAVSTIANQGNIYLSTGTVLLSQSGKELVKIVADTCGRHDTLGGACSAQSNTVRYAHDTLPMHNCRDTFMLQLSKYDSRYTKRDLAPNVNFFMNVPVTPSGGLTFNDGVSAPGYYVEMEAINPTLVLISNCPQLNNPCNDYNPTPIRLVIWNSL
>NZ_CP022674.1|WP_114894329.1|395706_399318_-|urea-carboxylase
MFTKVLIANRGAIAVRIERTLRHFGVKSVAVYTEADQDSLHVDEADEAILIGSGPVKESYLNEDLILDIAKKTGAEAIHPGYGFLSENAEFARRCQAEGIVFIGPTPQQMEIFGLKHSAREIAQKADVPLLPGTSLITDVSEAVCAAEEIGYPIMLKSTAGGGGIGMRVCQDEKALQAAFDSVCHLAQTNFKNSGVFLEKYIQKARHVEVQIFGNSFGEVVALGERDCSIQRRNQKVIEESPAPNFPSYIRKNMLQAATRLAKEVGYRSAGTVEFLYDSEAERFYFLEVNTRLQVEHGVTEEVLNVDLVEWMLKEACNELVNLPSLLPMPSGHSIQARIYAEDCLNDFRPSGGQIDQAIFSKRARVETWVRDGITVTSLYDPMLAKIIVHGKTREEALLKLSAALKETRLYGVTTNLQYLQGLLEEKACKTGNVYTQMLNSYNPSEQALEVLDGGVQSTIQDYPGRTGHWNVGVPPCGPMDPFAFRIGNKLLGNSPDAPGIEMTLRGGSYKFRDNVSFCITGANMHAILDGAEIPMYKTIQAKPGQILSFSEATEGMRTYLLIGGGLDMPKILGSSSTFTLGSFGGHGGRALRTGDVLRVSDYSHVENELALSYQPAMAKEWTIGVIPGPHCTEEFLQPEYLKQLTDTKWEVHFNSSRTGVRLIGPAPFWTREDGGEAGLHPSNIHDNAYAIGTLDLTGDMPILLGPDGPSLGGFVCPVTTASAEFWKIGQLHPGDKISFKLIDLEQAEKLKCTQEDFLQHIGTSASLPVLTNPVAQPLKNDYPLLINETENRRFPFSVRCSGDANILVEYGEMELDLLLRFQVHALMEAIQKREDLPVLDLTPGIRSLQIHIDAAKMSILELCQHISAIDHALPPLEEMEVPSRIVKLPLSWDDPATQLAIERYQQNVRPDAPWCPSNLEFIRRVNGLDHLEDVKRIVFDANYLVMGLGDVYLGAPVATPLDPRHRLVTTKYNPARTWTPENAVGIGGAYMCVYGMEGPGGYQFVGRTIQMWNRLRQTESFEAGKPWLLRFFDQIQFYPVEADELLKLREDFLRGRFEADITETTFKLGEYLDFLSSIEESTAAFRHTQQAAFQTERENWKALGLAEYVSEHETAEITEQELPEGTEAARCTMPGSVWKVLVEEGQKIEKGDTLIIEESMKMEFPQLAPMDGYISSIHVKPGDEVQAGQLIAGIKAFAPITH
>NZ_CP022674.1|WP_114894328.1|393943_395692_-|allophanate-hydrolase
MKTVSLPKTFSVQWLRDMYIKKELTPEDVVHQILTRVEADKDMNIWITPPTLGELKPYLNRLATLSPEALPLWGIPFAIKDNIDVAHVPTTAGCREYTYIPSEHATVVQRLIDAGAIPLGKTNLDQFATGLVGTRSPYGETHNALKPELISGGSSSGSAVSVARGHAAFSLGTDTAGSGRVPAGLNRLIGYKPSLGAWPSAGVVPACKSLDCVTAFAHEWSDVLLVDSIIRGVDDRDPWSRSVVRASSALPEKIYMVKEPLSFYGPFAEQYKKAWTQAVKKIEDFSIPIEYIDGSYLSEAAALLYDGPYVAERWADLGEFITSHEETAFPVTEQVLRSGAKSEYDAAALFQASHKLQSFKHKAYHQLKNAVLVMPTAGGTWTREQVRENPIETNSDMGCFTNHCNLLDLCAVSLPAQDADLDLPFGISFFSTFDGEQFICGLSELFLNGERTVDSKKDTTLVAVCGLHMRGFPLESQMHEHGASFVNKDQTAPYYQLFKLPTSPAKPGLLRTHQQGEKIEVELWEMPLSLLGSFADSIPSPLGLGKITLEDGSEVAGFLCEAHATEDAEDITSYRSWRAVHS
>NZ_CP022674.1|WP_114894327.1|393217_393826_+|DedA-family-protein
MKEREICMIERRKKVQGFIDFVQNLGIVGIFIATAIEAAAIPFPCTLSILLIGSVLQLSIWKILIVSAFNTVIYIAFNYIPFVMGYRFESITKRWFGEKNIKRAQKWFHKYGKWSITISRPISIANYITYLAGLSKIKSRDFVLYSTLGIFPWFVFLLYVGGLGDIEKIQKYLHDVDRLILVILIIGVIVGAGWWMKKRKNT
>NZ_CP022674.1|WP_114894334.1|408313_408946_+|NAD(P)-dependent-oxidoreductase
MKIGVIGATGKAGQLIMEEAKQRGHEVTAIVRNAAKLKNQTNVMEKDIFAITSKDIEQFDAVVDAFNAPPGSEQLHVESIQSLIKAFQGVQTRLAVVGGAGSLFVDAEKTTPLMSTEGFPTAYYPTASNMGKGLKELKKSTINWTYLSPAAFFDAEGARTGAYQLGKDHVITNSQNESYISYADYTIALIDELENKNHVNERFAVVGEKA
>NZ_CP022674.1|WP_114894335.1|409116_410103_+|gfo/Idh/MocA-family-oxidoreductase
MIRFGVIGTNWITDRLLESAQYVDDFQLAAVYSRTIEKAEEFAGKYDIPHIFTDLEEMAASSEIDAVYIAAPNAYHAEQAILFLKNNKHVLCEKPLAANATEVTRMIQAAKNHKVLLMEAMKSTLLPNFKVIQENLHKIGPIRKYVASYCQYSSRYDKYKEGIVLNAFKPELANGSLMDLGVYCLYPLITLFGGPHKIKATAFMLESGVDGEGSVALEYEDRDAVIMYSKITNSHLPSEIQGEKGSMIIDKIHTAEKVEIRYNDGRVEELTVDQPYPAMYYELNEFVELLKQGKMESDTNSYENSYLTMHVMDKVREQIGLVYPNDKK
>NZ_CP022674.1|WP_114894336.1|410715_411258_+|peroxiredoxin
MAERMVGKQAPRFEMEAVLANKKFGKVSLEENMKNGKWTVLFFYPMDFTFVCPTEITALSDHYEEFEDLDAEVVGVSTDTIHTHLAWINTDRKDNGLGDLNYPLAADPTHAVARDYGVLIEEEGVALRGLFIINPEGELQYAVVNHNNIGRSVEETLRVLQALQTGGLCPANWKPGQKTL
>NZ_CP022674.1|WP_013055693.1|411374_411818_+|TlpA-family-protein-disulfide-reductase
MKLREQMPELTGATSWINDEVTKEDLVGDKATLIHFWSVSCHLCKEAMPEVNDLRDEYDDQLNVVAVHMPRSEDDLDMGVIEAMAMGHDITQPIYVDSEHKLTDAFENKYVPAYYVFDKEGQLRHFQAGGNGMPMLRKRINRVLGEE
>NZ_CP022674.1|WP_114894337.1|412350_412962_+|sigma-70-family-RNA-polymerase-sigma-factor
MTQLYSQQEKRHDKECIFHTFLTNHSATLQTHIMNTFLTPERYERLQKAVVKNDTKEQRLLNKEFHQFYSEVRLLHYINKLCSHYSRDVMRVKEKERSYIPLRLQQPAALDGNRTVEDMLGVQDGAVWEHEFLGNQLENRILHHAFRQLTAKQQCMLHLIIVERWTHKEIAAYFSISQQAVSNHYQRALDKLKKIMKVSDRYV
>NZ_CP022674.1|WP_013055696.1|412954_413101_+|YvrJ-family-protein
MFDPQWLQLVGNVGFPAVLSFYLLLRVENNIKRLEEKVEELTTDLRKK
>NZ_CP022674.1|WP_114894338.1|413105_413333_+|hypothetical-protein
METLYELVNKVKAGDEEASRRLLKKLEPKLNKAVQSFSLHEREDVKQDLKIKILSAVKTFDFSRTPGLWEFLRHK
>NZ_CP022674.1|WP_114894339.1|414325_414532_+|hypothetical-protein
MEWLHKNRFHSKFIYLFQINVIFAPEPSKEQKLIDYQKFNKEEISKMTDPQVEYYHWLYFDDSVYDYM
>NZ_CP022674.1|WP_114894340.1|414715_415429_-|DUF4386-domain-containing-protein
MNSNKKAAKMVGVLFILAAVTAIIGLILYDPILNGPDYLTRGSEYANQVIMGAIMELILVVSAIGTSTIMFPFLRKYNETIALWHVCFRFLEAVIITVGVISVLSLLTLSQEFVATGTQDATSFQASGTVLKALHDWTFLLGPNIMLGINTMMYSYIFYKSKLVPRFIPILGMIGATLVFIAGLLEMFDVFSQLSFWGAILSLPVAANEMILAVWLIVKGFNESALASLEEEKKAMR
>NZ_CP022674.1|WP_114894341.1|415741_416998_-|alkaline-phosphatase
MKKRLIGTAVLSVATIAALTFNTTTQSDAKAATSLNNGKAKNVILFVGDGMGTDHRDAIRLATVGTNGKLAMDDMPVEGRVHTSSGSSFVTDSAAAATAIASGVKSYNGAVGVNMKGKPVQTVLEKAKLSGKATGLVTTSQVTDATPAAFGAHVSNRSAQSDIAKQYLENSKVDVILGGGEDYWYPAGSPGSYPDAPPEDKEEGSKGTKGNLVNKAQKLGYTYVDNANELKYAKGQKVLGLFANEEMFQQAPEGEGDVYNPTVSLRDMTKKAIDTLSQNKKGFFLVVEEEGIDEMAHNNNASLTIKAGQQLDDTVKMAKKYAKTHPDTLVLVTADHSTGGLSLETTDKNDESGDGVSKEDGPFNIANSKEQFMVDWTTEGHTASDVPLNAMGAKSELFNGVYENTYIHDALVKAMKLK

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Crispr_ID: NZ_CP022674_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022674_2

2959613-2959882

Orphan

Consensus_repeat	Method
GATGCCANTGATTCCANG	CRT

7 spacers

The CRISPR arrays of NZ_CP022674_2

>merge|NZ_CP022674|2|2959613-2959882|CRT
TATGCCATTGATTCCACGAACTGTGTGGATGCTGCTGGTGCCACTGATTCCATGGCACATATGGATTTTGCTGATGCCACTGATTCCACGTACCGTGCGGATACTGATGATGCCACTGATTCCATGGTGTGTATGGATGTTGTTGATGCCATTGATTCCATGTGCCGTGCGGATACTGTTTATGCCACTGCTCCCAAGGTACATGAGGATGTTGCTGATGCCATTGATTCCACGTGCCTTGAGGATGCTGATGATGCCATTGTTCCCATG

>NZ_CP022674|2|1|2959613-2959882|CRT
TATGCCATTGATTCCACG	AACTGTGTGGATGCTGCT
GGTGCCACTGATTCCATG	GCACATATGGATTTTGCT
GATGCCACTGATTCCACG	TACCGTGCGGATACTGAT
GATGCCACTGATTCCATG	GTGTGTATGGATGTTGTT
GATGCCATTGATTCCATG	TGCCGTGCGGATACTGTT
TATGCCACTGCTCCCAAG	GTACATGAGGATGTTGCT
GATGCCATTGATTCCACG	TGCCTTGAGGATGCTGAT
GATGCCATTGTTCCCATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022674.1\|WP_098599192.1\|2960066_2960285_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022674.1\|WP_114896055.1\|2957814_2958297_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379334
NZ_CP022674.1\|WP_114896057.1\|2961978_2962851_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP022674.1\|WP_098599191.1\|2958913_2959273_-\|sulfurtransferase	unknown	unknown	unknown
NZ_CP022674.1\|WP_034650302.1\|2964757_2965468_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP022674.1\|WP_028414566.1\|2958343_2958571_-\|sulfurtransferase-TusA-family-protein	unknown	unknown	gnl\|CDD\|238180
NZ_CP022674.1\|WP_114896060.1\|2964407_2964599_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022674.1\|WP_114896051.1\|2955315_2956443_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_CP022674.1\|WP_114896049.1\|2954217_2954994_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP022674.1\|WP_114896056.1\|2960391_2960919_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022674.1\|WP_114896054.1\|2957430_2957787_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP022674.1\|WP_114896059.1\|2963892_2964384_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP022674.1\|WP_114896050.1\|2955064_2955289_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238180
NZ_CP022674.1\|WP_028409367.1\|2958663_2958924_-\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197390
NZ_CP022674.1\|WP_114896053.1\|2957112_2957409_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP022674.1\|WP_114896052.1\|2956505_2957057_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP022674.1\|WP_114896062.1\|2967533_2968973_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|181973
NZ_CP022674.1\|WP_013084067.1\|2961068_2961848_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|236308
NZ_CP022674.1\|WP_114896058.1\|2962965_2963859_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_CP022674.1\|WP_114896061.1\|2965636_2967520_+\|PTS-beta-glucoside-transporter-subunit-EIIBCA	unknown	unknown	gnl\|CDD\|273919

Protein	Function_ID	Function_description	E-value
NZ_CP022674.1\|WP_114896055.1\|2957814_2958297_-\|hypothetical-protein	gnl\|CDD\|379334	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family. DsrE is a small soluble protein involved in intracellular sulfur reduction. The family also includes YrkE proteins.	1.02654e-78
NZ_CP022674.1\|WP_114896061.1\|2965636_2967520_+\|PTS-beta-glucoside-transporter-subunit-EIIBCA	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_CP022674.1\|WP_034650302.1\|2964757_2965468_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.66059e-64
NZ_CP022674.1\|WP_028414566.1\|2958343_2958571_-\|sulfurtransferase-TusA-family-protein	gnl\|CDD\|238180	cd00291, SirA_YedF_YeeD, SirA, YedF, and YeeD. Two-layered alpha/beta sandwich domain. SirA (also known as UvrY, and YhhP) belongs to a family of bacterial two-component response regulators that controls secondary metabolism and virulence. The other member of this two-component system is a sensor kinase called BarA which phosphorylates SirA. A variety of microorganisms have similar proteins, all of which contain a common CPxP sequence motif in the N-terminal region. YhhP is suggested to be important for normal cell division and growth in rich nutrient medium. Moreover, despite a low primary sequence similarity, the YccP structure closely resembles the non-homologous C-terminal RNA-binding domain of E. coli translation initiation factor IF3. The signature CPxP motif serves to stabilize the N-terminal helix as part of the N-capping box and might be important in mRNA-binding.	6.70196e-29
NZ_CP022674.1\|WP_114896051.1\|2955315_2956443_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	8.10166e-64
NZ_CP022674.1\|WP_114896049.1\|2954217_2954994_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	3.27849e-30
NZ_CP022674.1\|WP_013084067.1\|2961068_2961848_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|236308	PRK08594, PRK08594, enoyl-[acyl-carrier-protein] reductase FabI.	3.29234e-144
NZ_CP022674.1\|WP_114896057.1\|2961978_2962851_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.51657e-48
NZ_CP022674.1\|WP_114896054.1\|2957430_2957787_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	2.25445e-33
NZ_CP022674.1\|WP_028409367.1\|2958663_2958924_-\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|197390	cd10155, BsYrkD-like_DUF156, Uncharacterized protein YrkD from Bacillus subtilis and related domains; this domain superfamily was previously known as part of DUF156. This domain family contains an uncharacterized protein YrkD from Bacillus subtilis and related proteins. This family is part of a larger superfamily that contains various transcriptional regulators that respond to different stressors such as Cu(I), Ni(I), sulfite, and formaldehyde, and includes CsoRs (copper-sensitive operon repressors). CsoRs form homotetramers (dimer of dimers). In Mycobacterium tuberculosis CsoR, within each dimer, two Cys residues on opposite subunits, along with a His residue, bind the Cu(I) ion (forming a triagonal S2N coordination complex, C-H-C). These residues are conserved in the majority of members of this superfamily. In this family, however, not all these residues are conserved, there is an Asn instead of the His (C-N-C); also a conserved Tyr and a Glu residue that facilitates allosteric regulation of DNA binding for CsoRs are very poorly conserved.	3.94076e-36
NZ_CP022674.1\|WP_114896053.1\|2957112_2957409_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	4.41213e-31
NZ_CP022674.1\|WP_114896052.1\|2956505_2957057_-\|hypothetical-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	8.99289e-28
NZ_CP022674.1\|WP_114896062.1\|2967533_2968973_+\|6-phospho-beta-glucosidase	gnl\|CDD\|181973	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed.	0
NZ_CP022674.1\|WP_114896059.1\|2963892_2964384_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.91702e-15
NZ_CP022674.1\|WP_114896050.1\|2955064_2955289_-\|hypothetical-protein	gnl\|CDD\|238180	cd00291, SirA_YedF_YeeD, SirA, YedF, and YeeD. Two-layered alpha/beta sandwich domain. SirA (also known as UvrY, and YhhP) belongs to a family of bacterial two-component response regulators that controls secondary metabolism and virulence. The other member of this two-component system is a sensor kinase called BarA which phosphorylates SirA. A variety of microorganisms have similar proteins, all of which contain a common CPxP sequence motif in the N-terminal region. YhhP is suggested to be important for normal cell division and growth in rich nutrient medium. Moreover, despite a low primary sequence similarity, the YccP structure closely resembles the non-homologous C-terminal RNA-binding domain of E. coli translation initiation factor IF3. The signature CPxP motif serves to stabilize the N-terminal helix as part of the N-capping box and might be important in mRNA-binding.	8.30579e-26
NZ_CP022674.1\|WP_114896058.1\|2962965_2963859_+\|DMT-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	4.05235e-14

>NZ_CP022674.1|WP_098599191.1|2958913_2959273_-|sulfurtransferase
MLYIAVLLLAILFIAYRRYYPVKGIQCIRESEAKELGRTVVDIRHYHDVRDSISIVIPYAYLKRFYSEIPQGSVHLIAGDRVELNLGVRFLRKKGFEVRSYELAACESKGKKGVFDYGV
>NZ_CP022674.1|WP_028409367.1|2958663_2958924_-|metal-sensitive-transcriptional-regulator
MEYNQQVKNRLRRIEGQLKGVLSMMEQGKDCRDVVTQLSAARSAIDRTMGVIVSSNLEQCVRESLEQGEPTEGLVKEAVQLLVKSR
>NZ_CP022674.1|WP_028414566.1|2958343_2958571_-|sulfurtransferase-TusA-family-protein
MKIDQVLDAKGLACPMPIVKTKKAMDTLTTGQVLEVQTTDKGAKSDLTAWAKSTGHELIDFKEEGSTFIFYIQKS
>NZ_CP022674.1|WP_114896055.1|2957814_2958297_-|hypothetical-protein
MTEQKKRTTIVLFSGDYDKAMAAYIIANGAAAYDHEVTIFHTFWGLNALRKEEMVRVKKGFLEKMFGKMMPRGADKMGLSKMNFAGMGPKMIKNVMKKHNALTLPQLIEMAQEQDVKLVACTMTMDLLGLQEKELLDNIEYAGVAAYLADAEDGNVNLFI
>NZ_CP022674.1|WP_114896054.1|2957430_2957787_-|rhodanese-like-domain-containing-protein
MIINALIIVFLLWFLYQRFAPVKGIQQIATTELKAKLKNKHNQFIDVRTPHEFRTKHIKGFRNIPLSELPAQTGQLSKDREVVVICQSGMRSMKASKLLKKQGFTSITNVKGGMNTWR
>NZ_CP022674.1|WP_114896053.1|2957112_2957409_-|rhodanese-like-domain-containing-protein
MKTIAAQEVEQLVKKQEQVHILDVREVEEVKTGKIPNALNIPLPLLEFRMHELDKEKNYIVVCRSGGRSGMAARFLEQQGYSVRNMTGGMMEWKGETV
>NZ_CP022674.1|WP_114896052.1|2956505_2957057_-|hypothetical-protein
MMQANFVLDAKGLACPMPIVRTKKKMNELEAGQVLEIQATDKGSTADLQAWAKSTGHEYLGTEAAGDVLHHFLRKGGAEENVTPIPEISLEEFAKKVENDEHLHILDVREVEEYDEAHIPGVVHIPLGEVEKRSNELNKENEIYIICHSGRRSEMAGQTMKKQGFKHLINVVPGMRDWTGKVE
>NZ_CP022674.1|WP_114896051.1|2955315_2956443_-|MBL-fold-metallo-hydrolase
MTVHVLTAKEVTAKIINKEPLFILDVRNESDFSDWKIEGHYFDHLNVPYFDLLDGVEEILEKIPSNKEVLVVCAKEGSSVMVADMLSEAGLTVSYLKGGMKAWSEYLEPVKVGDLKDGGEIYQFVRIGKGCLSYMIVSNGEAAIIDATRMADVYINFAKELGVTVKHVFDTHLHADHISGGRVIAEATNAAYWLPPKDAEEVIFDYKALEEGSDVVIGNTTITIQPLYSPGHTIGSTSFIVDDQYLLSGDILFIDSIGRPDLAGMAEDWVGDLRETLYTRYKALSDELIVLPAHFMIIDELNDNGSVAEKLGTLFAENHGLNIKDEAEFRHLVTDHLPPQPNAYQEIRETNMGKVSPDEEKQREMEIGPNRCAIR
>NZ_CP022674.1|WP_114896050.1|2955064_2955289_-|hypothetical-protein
MESNKVLDAKGLACPMPIVKTKKAMNELEAGQVLEIHATDKGAKNDLAAWAKSGSHELLHTEEGDVLKFWIKKG
>NZ_CP022674.1|WP_114896049.1|2954217_2954994_-|sulfite-exporter-TauE/SafE-family-protein
MDFTFIITLFLIGFMGSFISGMVGIGGSVINYPMLLYIPPLVGVGALTAHQVSGAGAIQVFFATLGGVWAYRKSGFLNKSLILYMGSNILIGSMLGSYSSHYMSEQGLNVVYGVLALIAVMMMFIPKKNLDCIKDGKLQFNKGLASILSLLIGAVAGILGAGGAFILVPVMLVVLKIPTRITIATSLAVTFISSIGSTVGKLVTHQVPFIPALILVAASLIASPIGAKVGQKMNTKVLQWILAGLILATAIKIWWGLL
>NZ_CP022674.1|WP_098599192.1|2960066_2960285_+|hypothetical-protein
MVKNLPLLMVTLLIGVSSSLIIGSVNLSGSIEWIFLIISIIANITAVIGLSLHVFVYLPMKKAEKNLKETFK
>NZ_CP022674.1|WP_114896056.1|2960391_2960919_-|hypothetical-protein
MITIKKDDKYYVEKSHFSKKHHHCSSQQGNTRDSAFRALNLTNQPVSANTSVKVSYQFKQFDLANEYNPVTSVFRPKKDGVYSLVATIGFLPNDTTVDYRARVEIRVNGTAVIAIDNDFFGGNTIFVNVVSVSTIYNLEKGDRVEVFAESNVDGTIVTTENVSHFEAARFPSPSE
>NZ_CP022674.1|WP_013084067.1|2961068_2961848_-|enoyl-[acyl-carrier-protein]-reductase-FabI
MEDLLQLKNKNIVIMGVANDRSIAWGVAKALHQVGANLIFTYRKERSLGKLNKLLEKNEIQASLIAECDVNSDESIEAAFKKIGEEAGTVHGVIHSVAFAHSEDLNGEFINTSRSGYAFAQDTSAYSFIAVAKAAKPLMTEGGSLVAMSYLGAERAVEGYNVMGVAKAALESSVKYLALDLGKDNIRVNAISAGPIRTLAAKGISDFNQILHHVEEKAPLKRNVTQAEVGDMTVVLLSHLSRGVTGEIVHVDAGYNIVG
>NZ_CP022674.1|WP_114896057.1|2961978_2962851_-|LysR-family-transcriptional-regulator
MSLVKYEILNKVAEVKSFTKAADALALTQSAVSHAITNLETEFGFPLVNRNRSGITLTTEGEAMLLAIRKVLQENEKVHQEAASLLGLAKGTIKIGIFKSVSTKWLPEIIQLMEKNYPEIQIQLKEGDYLEIEQWLLSGEIDCGFINITHSSQFHIISLKKDRLLCVVSNQSALYHQKTVSFEDLEKEPFIMPTYGGYHDIKQLFEERGIQPDIRFELMDESAILSMVTHHLGISILPEMLLDSIPQELRAIPFQVDSYRSIGLATRYHLSPAAKKFAETTQAWLQDSDK
>NZ_CP022674.1|WP_114896058.1|2962965_2963859_+|DMT-family-transporter
MSYRTRANMMMIGVNVFWGMSYVFMKMGLSSLGSFTIIALRCLIAFFIAGLFFHKPLRQSTRKTILSSAILGFLLFSVFAFVTFGVSMTSASNAGFLVSLTVIFVPLLHCLLVKKLPSWPIGLGVITTLTGIGVLTLKHSFHMNAGDLLCIGTALCYAIHITLTGTFTKNENPIALGILQLGFAGLFALTCSFLFEHPSIPTTLSSWIAILGLGVFCSAIGFICQAIAQRYTTPTHTGLIFATEPIFAALFAVLFLHELFTLKELIGSVIVVAGILIAQLDNLLLKKRVHYQETLPK
>NZ_CP022674.1|WP_114896059.1|2963892_2964384_-|GNAT-family-N-acetyltransferase
MSESIIIEPYASKYQQQVVDLILHIQQQEYQIPITEKDQPDLFEIESFYQQGNGNFWVAVCNERIVGSVALIDIGSRQVALRKMFVAKSYRGATLKTAHRLLHTAIAWAKQREVERIYLGTTLQYRAAHRFYEKNGFQHIEKEKLPGNFPVMNVDKKFYTYKV
>NZ_CP022674.1|WP_114896060.1|2964407_2964599_-|hypothetical-protein
MKKMLSYLIPMLFMFGLLSMNLFQPTKGDFIAVGAISILAGAVIGFIMNVGCAVLKTVKSKMK
>NZ_CP022674.1|WP_034650302.1|2964757_2965468_-|GntR-family-transcriptional-regulator
MIKYQQIAIEIETYIEDHKLQQGDKLPVLETLMAQFKASKSTVTKALDLLEKKGVVFQVRGSGIFVRRHKRTGYIGLLSNQGFTSELEDFQLTSEVIELDVRKPTQEAALNLNIEENSDVYYVKRVRYINGQTLCLEESFYNKSIVTYLNNEIVSQSIFHYIKEGLGLKIGFSDLYLHVGKLNEEEATYLGLKEGDPKLFIETLFHLANGQPFDFSKVTYNYEQSQFFLQATSHVL
>NZ_CP022674.1|WP_114896061.1|2965636_2967520_+|PTS-beta-glucoside-transporter-subunit-EIIBCA
MGGKIRDYHKLAADILDAVGGEENIVSATRCATRLRIVLKRSKPDAKRKVSSMPGVITVVENSGQFQVVIGQHVGDVYEEFASLVNLDTAEEQSENKGTILNRVIATMSAVFAPFVYILAAAGILQGSLILINLFSDSFAKTGTYQVLSFISWAPFVFLPIFIAITASKHFKTNTYIAVACCAALVSPTWAEMAAKIADGSSITFLGLSLSETVYTSSVLPPLFLVWILSYLERFLNKSIHQVVRPLFVPFLCMVIMVPVTILLIGPVTTMGANGIAHGYNFLAENVPALAGAIIGGFWQIVVIFGVHWGITPMVLANFDLNGRDSFQAYQTIAVVAQVGAVLGVILKAKSQEARKVSVSAGITGLFGITEPAIYGVNLRFKKPFIFGCVSGAIGAVVASFFHPYYFAYAGLPGPLTIVNGISQDYPMSIWGILIGCAIAIILPVVLIQVFGYGEDAAKDAATSALKEVAVSNPNENEETISAPFSGKVIPLSSVPDEVFSSGAMGKGLAIDPSDNKLYAPFDGTVVMVAPTKHAIGLRSEYGVELLVHIGLDTVTLDGKPFTLHVEDGVKFKKDDLLIEFDKEFIETQGLQTITPVIITNSSAYREVIVEDIENSGLNQTLFTVVK
>NZ_CP022674.1|WP_114896062.1|2967533_2968973_+|6-phospho-beta-glucosidase
MTKMPKNFLWGGALAAHQFEGGWNQGGKGPSVVDVMTAGAHGVPRQITETVEDDKFYPNHEAIDFYHRYKEDIALFAEMGLKCLRTSIGWSRIFPKGDEAEPNEEGLKFYDDVFDELLKHGIEPVITLSHFEMPLHLAREYGGFRSRKTVDCFVKFAEVCFDRYKDKVTYWMTFNEINNKMDVNNPLFLWTNSGVSVKPGENAKEVMYQAGHHELLASALAVSKGKEINPNFQIGAMVSHVPIYPYSSNPEDVMLAEETMRQRYFFPDVQVRGYYPSYALKEFEREGYHIPFEEGDEEILRNGKVDYLGFSYYMSTTVKSDVEADNTGDIVNGGLPNGVANPYIKSSDWGWSIDPTGLRYTLNRFYDRYQIPLFIVENGFGAIDTVEEDGSIHDASRIEYLKSHIEALEKAVTYDGVDLMGYTPWGIIDIVSFTTGEMKKRYGMIYVDRDNEGNGSMERYKKDSFNWYKNVIKTNGEEL

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Crispr_ID: NZ_CP022674_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022674_3

5223612-5223771

Orphan

Consensus_repeat	Method
CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGGTAGCGAAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022674_3

>merge|NZ_CP022674|3|5223612-5223771|CRISPRCasFinder
CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGGTAGCGAAACAAATGTACAAGAAGTGAAACAACAAAATGCTCAAGCAGCGGCAAACAAAAGCCAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGCTAGCGAAACAA

>NZ_CP022674|3|2|5223612-5223771|CRISPRCasFinder
CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGGTAGCGAAACAA	ATGTACAAGAAGTGAAACAACAAAATGCTCAAGCAGCGGCAAACAAAAGC
CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGCTAGCGAAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022674.1\|WP_114897215.1\|5217299_5218109_+\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|237619
NZ_CP022674.1\|WP_013055154.1\|5219000_5219315_+\|DUF1811-family-protein	unknown	unknown	gnl\|CDD\|378063
NZ_CP022674.1\|WP_014461827.1\|5222366_5222591_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022674.1\|WP_043977883.1\|5230125_5231139_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213234
NZ_CP022674.1\|WP_043977886.1\|5231131_5231923_+\|daunorubicin-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226953
NZ_CP022674.1\|WP_016762869.1\|5225199_5226951_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP022674.1\|WP_114897218.1\|5226986_5228075_-\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP022674.1\|WP_114897219.1\|5228624_5229923_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|183493
NZ_CP022674.1\|WP_043977877.1\|5224493_5225030_+\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|184219
NZ_CP022674.1\|WP_080781581.1\|5220017_5220998_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP022674.1\|WP_013055156.1\|5219684_5219954_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379438
NZ_CP022674.1\|WP_050688500.1\|5216299_5217202_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|273800
NZ_CP022674.1\|WP_013081548.1\|5224037_5224298_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372951
NZ_CP022674.1\|WP_114897216.1\|5218264_5218918_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187643
NZ_CP022674.1\|WP_114897217.1\|5221237_5222332_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP022674.1\|WP_016762865.1\|5219393_5219549_-\|small,-acid-soluble-spore-protein-K	unknown	unknown	gnl\|CDD\|285399
NZ_CP022674.1\|WP_013081554.1\|5232811_5233204_+\|ion-channel-protein	unknown	unknown	unknown
NZ_CP022674.1\|WP_013055160.1\|5222707_5223457_+\|enoyl-[acyl-carrier-protein]-reductase-FabL	unknown	unknown	gnl\|CDD\|236145
NZ_CP022674.1\|WP_080781582.1\|5228218_5228443_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022674.1\|WP_013055169.1\|5231932_5232718_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226218

Protein	Function_ID	Function_description	E-value
NZ_CP022674.1\|WP_114897215.1\|5217299_5218109_+\|recombination-regulator-RecX	gnl\|CDD\|237619	PRK14135, recX, recombination regulator RecX; Provisional.	6.41409e-119
NZ_CP022674.1\|WP_013055154.1\|5219000_5219315_+\|DUF1811-family-protein	gnl\|CDD\|378063	pfam08838, DUF1811, Protein of unknown function (DUF1811). This is a bacterial family of uncharacterized proteins. Some of the proteins are annotated as being transcriptional regulators. The structure of one of the proteins in this family has revealed a beta-barrel like structure with helix-turn-helix like motif.	5.92623e-60
NZ_CP022674.1\|WP_043977883.1\|5230125_5231139_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213234	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA. NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the proton-motive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunorubicin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single integral membrane protein.	1.08742e-121
NZ_CP022674.1\|WP_043977886.1\|5231131_5231923_+\|daunorubicin-ABC-transporter-permease	gnl\|CDD\|226953	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only].	3.75643e-29
NZ_CP022674.1\|WP_016762869.1\|5225199_5226951_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP022674.1\|WP_114897218.1\|5226986_5228075_-\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	5.64509e-67
NZ_CP022674.1\|WP_114897219.1\|5228624_5229923_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|183493	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional.	0
NZ_CP022674.1\|WP_043977877.1\|5224493_5225030_+\|DUF402-domain-containing-protein	gnl\|CDD\|184219	PRK13662, PRK13662, hypothetical protein; Provisional.	3.50359e-127
NZ_CP022674.1\|WP_080781581.1\|5220017_5220998_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	3.50396e-35
NZ_CP022674.1\|WP_013055156.1\|5219684_5219954_+\|hypothetical-protein	gnl\|CDD\|379438	pfam14043, WVELL, WVELL protein. This family includes the B. subtilis YfjH protein, which is functionally uncharacterized. This is not a homolog of E. coli YfjH, a synonym for IscX, which belongs to pfam04384. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length and contain a highly conserved WVELL motif.	7.28774e-43
NZ_CP022674.1\|WP_050688500.1\|5216299_5217202_-\|TIGR01777-family-protein	gnl\|CDD\|273800	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239., TIGR01777 family protein. This model represents a clade of proteins of unknown function including the E. coli yfcH protein. [Hypothetical proteins, Conserved].	3.05556e-139
NZ_CP022674.1\|WP_013081548.1\|5224037_5224298_+\|hypothetical-protein	gnl\|CDD\|372951	pfam14182, YgaB, YgaB-like protein. The YgaB-like protein family includes the B. subtilis YgaB protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.	6.50685e-20
NZ_CP022674.1\|WP_114897216.1\|5218264_5218918_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187643	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR. These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.52339e-56
NZ_CP022674.1\|WP_114897217.1\|5221237_5222332_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	3.49443e-152
NZ_CP022674.1\|WP_016762865.1\|5219393_5219549_-\|small,-acid-soluble-spore-protein-K	gnl\|CDD\|285399	pfam08176, SspK, Small acid-soluble spore protein K family. This family consists of the small acid-soluble spore proteins (SASP) belonging to the K type (sspK). The sspK are unique to the spores of Bacillus subtilis and are expressed only in the forespore compartment of sporulating cells of this organism. The sspK gene is monocistronic and transcription is primarily by the RNA polymerase with the forespore-specific sigma factor, sigma-G. Mutation deleting sspK results in loss of SspK from the spore but had no discernible effect on sporulation, spore properties or spore germination.	2.11098e-16
NZ_CP022674.1\|WP_013055160.1\|5222707_5223457_+\|enoyl-[acyl-carrier-protein]-reductase-FabL	gnl\|CDD\|236145	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL.	1.44845e-172
NZ_CP022674.1\|WP_013055169.1\|5231932_5232718_+\|ABC-transporter-permease	gnl\|CDD\|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.74767e-45

>NZ_CP022674.1|WP_013055160.1|5222707_5223457_+|enoyl-[acyl-carrier-protein]-reductase-FabL
MSQKVALVTGSSRGIGKEIALRLAKEGYDIVLNYARSKSAAQEVAEEIKALGREALVVKANVGKVEKIKEMFEQIDEVFGRLDVFVSNAASGVLRPIMELEETHWNWTMDINSKGYLFCAQEAAKRMEKVGGGKIVTISSLGSIRYLENYTTVGVSKAAVEALTRYLAVELAPKNIVVNAVSGGAVDTEALKHFPNRDELLDDARKHTPAGRMVEPKDMVDAVMFLVSDQANMICGQTLIIDGGRSLLM
>NZ_CP022674.1|WP_014461827.1|5222366_5222591_-|hypothetical-protein
MYVGRDMTALSMISKSEWKDSELAFFHHSLQQMTPYLNAEGQSIHQQIIKEIEARGGLQRHEADYTHGTHVSYD
>NZ_CP022674.1|WP_114897217.1|5221237_5222332_+|A/G-specific-adenine-glycosylase
MKQSKDIVQNFDIRAFQDDLISWFEQEQRILPWRQDQDPYKVWVSEIMLQQTRVDTVIPYFNNFISKFPTIKDLAYANEDDVLKAWEGLGYYSRARNLQTAVREVHEQYGGEVPNTPAEISKLKGVGPYTTGAILSIAYGVPQPAVDGNVMRVLSRILSVWDDIAKPKTRKLFEDIVHEIISKDNPSYFNQGMMELGAIVCTPTSPSCLLCPVREHCRAFAEGVQNELPVKSKKKAPRALQLAAAVIRDEDGNYLIHKRPSKGLLANLWEFPNIEVDLSIAPDHQQLQAFIQNEYGADIKIHAPFTTIQHVFSHIVWNITVYEAELASDISALKNLKLVSEKDLEQYAFPVSHQKILKEYLLVK
>NZ_CP022674.1|WP_080781581.1|5220017_5220998_-|metal-dependent-hydrolase
MDTGTHIAMGIALGGLATLDPTVSANTATMDAVMIGVMAGSLAPDLDTVLKLRNNAQYIRNHRGITHSIPAVILWPLLIVLILSLLLPGANLLHLWMWTFAGVIIHVFVDIFNAYGTQALRPFTNKWIALGVINTFDYVIFSAHVLAILIWFIGAEPGPTFITLYVLLAFYYGLRFYMRHQIAKRLRKQFPDVIKLNISPTLRFTHWHLAVTTEKYFHVGRAIGEEIFIYDTFDKVPIPESAVIEVAKKDENLSAFLSFSPIYRWELDEYNDHIEVRFIDLRYRSKDYYPFVAVVQLDYDLNIICSYTGWIFSEKKLRKKLDYLPH
>NZ_CP022674.1|WP_013055156.1|5219684_5219954_+|hypothetical-protein
MNDIFERLTNQLLNKNSSLSYAQARTWVELFWEDFESSYAKAGYDYKGKEATEKVVTMYINSYGDKLHEIAVKNPKYQHLLNNDDYLKH
>NZ_CP022674.1|WP_016762865.1|5219393_5219549_-|small,-acid-soluble-spore-protein-K
MRNKAKDFTNQHHTKLEGEPRAKAEYASKRANGTINTHPQERMHASNEREE
>NZ_CP022674.1|WP_013055154.1|5219000_5219315_+|DUF1811-family-protein
MSEKRYSDMTTYELQQEIGSLQEKARKAEQLGMVNEYAVLERKVTMARSYLLDPETFKAGEVYEIQGDPGSYFKIDYMNGVFAWGFRLGSPQNEEALPISMLKK
>NZ_CP022674.1|WP_114897216.1|5218264_5218918_-|SDR-family-NAD(P)-dependent-oxidoreductase
MKTVLITGGATGLGKELAKFYAKDYNVILAGRNHHKLKEAQHELGDNVYTMSVDITKYEEVGKSVEKLLMNHSVDILINNAGIGHFGPLTDYTKQAIDEVIDTNVKGTIFLTQALMPHLLTRPEPKVMNIISTAGLRGKANESVYVASKFGVRGFTESLKVEYQDTNLHVIAAYMGGMNTPFWDHNNHIKDKSRLRSASEIAEIIYKQQNDSEDILF
>NZ_CP022674.1|WP_114897215.1|5217299_5218109_+|recombination-regulator-RecX
MPVVTKITTQKNSGERYNVYLDYGKGEEFGFGVDENVLIKYDLKKGRQLDEFELTEIQYADDEKKAYNLAITYLSYRMRSEKEVHDYLKKKEINSTIIQQVIQKLVSHRYLNDEEFAKAFVLTQMNTTSKGPNVIQRELKEKGISDSIITLSLCEYPEEQQIQTAVKLIEKLKGKYKKLSQVMMKQKMEQALAVKGYSFSVIQEAFQRTDTEKESDEVWEALQYQGMKAHRRFSKYEGWEYQQKMKQALYRKGFSIEQIQSFLDSIEEE
>NZ_CP022674.1|WP_050688500.1|5216299_5217202_-|TIGR01777-family-protein
MKIVIAGGTGFVGKALTKHFLTQKHYVYILTRNADKAARDPKLKYVEWMQENSQPEEHVEGADVFINLAGVSLNSGRWTDERKKAIVESRLSSTQEILRIMAALPEKPSLYVNASAVGYYGTSTTETFTEASPSIGTDFLAETVKKWENEALKAMELNIRTVLTRFGVILGKDGGALPSTALPYKLFAGGTVGSGEQWMSWVHLQDVVKIIDYCIHTEQIEGPVNVTAPNPVQMKEFGKTIGKVLNRPHWMPVPSFGLQLLMGEMSMIILKGQRVLPEKLIQQNYIFTYTVLEDALRDLL
>NZ_CP022674.1|WP_013081548.1|5224037_5224298_+|hypothetical-protein
MKKFDQLVTQQLETMDQLLFLQSEIERCQEIEGELIKLHEEAKLHSVQDEISEMKLKLKEIQLTFEAQTEDIIRTYKSEGACSTLA
>NZ_CP022674.1|WP_043977877.1|5224493_5225030_+|DUF402-domain-containing-protein
MGIPVEGETIQIHSYKHNGHIHRVWDRTTVLKATNNLVIGGNDRTVVTESDGRTWVTREPAICYFHAQQWFNVIGMIREDGIYYYCNISSPFIYDDNEALKYIDYDLDIKVYPDMTYSLLDEDEYEKHRKEMNYPEVIDRILHNHVEELKGWIRQRKGPFAPDFIDIWYERFLTYRHS
>NZ_CP022674.1|WP_016762869.1|5225199_5226951_+|ABC-transporter-ATP-binding-protein
MGSIRRYMKFVQPYKWQIVGTVLIGIIKFAIPLLIPLLLKYVLDDIVNGHGMSSSEKVHKMVTIMGISFVVFLVLRPPIEYYRQYYAQWVSSKVLYDIRDQLFSHIQKLSLRYYANTRAGEVISRVINDVEQTKNFVITGLMNVWLDMMTIVIAIVIMFTMNVPLTLVSIILLPVYAFSVKYFYSRLRHLTRVRSQALAEVQGHLHERVQGISVIRSFAIEPHEQKQFDKQNSNFLQKAINHTNWNAKTFAVVNTITDLAPLIVITFAGYQVITESLSVGTMVAFVAYIDRLYNPLRRLVNSSTTLTQSVASMDRVFEFIDEEYDITDKKDAKECTELHGKVQFEHVSFAYEEEEKPVIHDINLDVEKGKSVAFVGMSGGGKSTLISLIPRFYDVTEGKILIDDIDIKTYKVRSLRDKIGIVLQDTVLFSDTVKNNILLGKPGATDEEVIAAAKAANAHDFIMNLPEGYDTKVGERGMKLSGGQKQRISISRVFLKNPAILIFDEATSALDLESEHYIQEALAELAKDRTTFIVAHRLSTITHVDEIVLLENGRVVERGSHEELIKKKGHYYQLFNVQQLDTI
>NZ_CP022674.1|WP_114897218.1|5226986_5228075_-|aromatic-acid-exporter-family-protein
MKLGARILKTGIAITLSLLLGEFLSLPSPIFAAIAAVFAIQPSIYRSYLTILEQIQANVIGAASAVCFGLIFGTHPIIIGFTAVVVIAVNLKLRINNTIGLALVTVIAIMENPGDNFVEYALIRFGTVLLGVFSAFIVNLIFIPPKYETRLYYKIVSTTEEIIKWIRMNLYHASEHTLLKEDIEKMKDNVAKMNQVFDFYKEERTYSTKKRFVKSRKLVLFRQMITVTTRALTTLKLLHRVENDLQVMPQQFQDLIKSEVECLLMYHEQVLLKFIGKLRVQPTTTVPNEACVGKRALIDKFMQYKIYDNDEENKVIYHIFPLISVIIEYSEELEHLDKLIDTFQNYHKDANSFDINHQRQED
>NZ_CP022674.1|WP_080781582.1|5228218_5228443_-|hypothetical-protein
MSQAVQLMYLICSSLDWIYFVMSRPLFRFTFGFSYRTFPPFITISYASSPFCQPVEKSREIPLFFCLFSLDIHS
>NZ_CP022674.1|WP_114897219.1|5228624_5229923_-|glutamate-1-semialdehyde-2,1-aminomutase
MQFTKSEQLHAEALEHIVGGVNSPSRSYKAVGGGAPIAMEKANGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITKAAETGVLYGTPTAHEVTFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRDKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIANEVITVPFNDIEPYKEALEKWGDQIAAVLVEPIVGNFGIVEPEPGFLEQVNELTHEAGALVIYDEVITAFRFMYGGAQDLLGVKPDLTAFGKIIGGGLPIGAYGGKKEIMEKVAPLGPAYQAGTMAGNPASILSGIACLEVLKQEGVYEQLDKLGAMLEEGILKHARTYNMPITINRLKGALTLYFTTETVKNYEQAENTDGELFARFFKLMLHQGVNLAPSKYEAWFLTTAHTEQDITDTLEAVEKAFKQLSEER
>NZ_CP022674.1|WP_043977883.1|5230125_5231139_+|ATP-binding-cassette-domain-containing-protein
MKNAIEVNQLRKEFKAYSSRSGLKGAFRDLFTRNYRVMKAVNDISFTVKQGEMVGYIGENGAGKSTTIKMLTGILTPTSGDITVNGMNPHKEREKFAQTIGVVFGQRSQLWWDIAVQESFRLLKKVYKVSDEDYNAHMEHVIQTLDIGPLLDKPVRKLSLGQRMRCELAAALIHNPPLLFLDEPTIGLDVLVKLKIRQFLKEINEKYNTTILLTTHDLADIEALCERVVMLDEGSIIYDGSLQKLRSNWGDLKQVTFEFGTAPNNEQLKLLTQGMPVNWIEGDQKYLWTAQLQNKGDLMSQLIAKVVAKHEISDINIEEISTEEIIRNIYEEGVVNG
>NZ_CP022674.1|WP_043977886.1|5231131_5231923_+|daunorubicin-ABC-transporter-permease
MDKYIEMIRIRFLMMLAYRTNYYSGILIYAINIGAYYFLWSAIYGGKENIQGLSITQMTTYVAVSWMARAFYFNNIDREMAMEIKDGKVAVELIKPYSYLGMKTMQGLGEGIFRLLFFSVPGMIIVAFLFPVQFSANAATWLYFGLSLIFSFIINTQINLLTGITTFFLFNNDGLIRAKRVVIDLFSGLLLPISFYPFWAQHIMSYFPFQAISYIPSMIFTNGFKGQEVINALITQAVWSGLLFIPIACLWNIAKKKMVIQGG
>NZ_CP022674.1|WP_013055169.1|5231932_5232718_+|ABC-transporter-permease
MFYFSIFFQYISQYMKTRLQYRTDMVVEIISDLLFQTVNLIFILVVFGHTQSLHGWSREEIIFIYGFFLVPFAIFSSFFNIWDFNERYIVKGEMDRILTRPIHSLFQVILERMELESLFGGITGIAVMAYAASSLHLHFQWYDVFIFLLFILGGALVYAGIFIALASIGFWSDARTSIMPTIYNIGNYGRYPVDIYNNVIRYVLTWILPFAFVGVYPAAYFLGRSEWYGYAFLTPVMGIVFFVISIFLWNTGVKKYRGAGN
>NZ_CP022674.1|WP_013081554.1|5232811_5233204_+|ion-channel-protein
MVIFLILVIIVFVIGSMKFLFEKELGEFHFFSIGHFFVLFYSYITVLLGFSLIYTVCEMGSIPVLSGGFEHEGHYFYTLFNSMYFSAATLFSVGYGDMYPVGIGKLFATFEAFIGYIMPAIFVMRTVTRT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

868 : 10702

Bacillus_phage(57.14%)

bacteriocin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114894119.1\|868_2299_+	hypothetical protein	A0A141E117	Streptococcus_phage	7.2e-34	31.1
WP_114894120.1\|2484_2886_+	hypothetical protein	NA	NA	NA	NA
WP_114894121.1\|2911_3232_+	hypothetical protein	NA	NA	NA	NA
WP_114894122.1\|3306_3627_+	hypothetical protein	NA	NA	NA	NA
WP_114894123.1\|3644_3887_+	hypothetical protein	NA	NA	NA	NA
WP_114894124.1\|4278_4602_+	hypothetical protein	NA	NA	NA	NA
WP_114894125.1\|4664_4880_+\|bacteriocin	bacteriocin uviB	A0A0S2SXR1	Bacillus_phage	4.2e-23	76.5
WP_114894126.1\|4930_5944_+	LysM peptidoglycan-binding domain-containing protein	A0A0S2SXM5	Bacillus_phage	4.1e-153	79.2
WP_114894127.1\|6001_6193_-	hypothetical protein	NA	NA	NA	NA
WP_114894128.1\|6234_7278_-	serine/threonine protein kinase	B0FEC2	Escherichia_phage	1.2e-57	40.7
WP_114894129.1\|7281_7761_-	hypothetical protein	G9L674	Escherichia_phage	1.7e-11	30.1
WP_114894130.1\|7974_8157_+	hypothetical protein	NA	NA	NA	NA
WP_114894131.1\|8321_8759_-	DNA-binding protein	NA	NA	NA	NA
WP_114894132.1\|8773_8980_-	XRE family transcriptional regulator	A0A0S2SXU5	Bacillus_phage	4.8e-08	45.2
WP_048020510.1\|9326_9533_+	hypothetical protein	NA	NA	NA	NA
WP_114894133.1\|9493_10702_+	cell division protein FtsK	A0A0S2GLG9	Bacillus_phage	4.3e-64	38.1

DBSCAN-SWA_2

2101736 : 2178901

Bacillus_phage(31.82%)

integrase,coat,portal,terminase,transposase,holin

attL 2154865:2154881|attR 2158308:2158324

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114895443.1\|2101736_2102090_-	hypothetical protein	A0A0K1LMH6	Bacillus_phage	1.4e-18	39.0
WP_114895444.1\|2102102_2102534_-	hypothetical protein	A0A0K1LLM8	Bacillus_phage	1.4e-20	39.4
WP_114895445.1\|2102545_2103130_-	hypothetical protein	B3RH37	Bacillus_virus	3.2e-57	50.5
WP_114895446.1\|2103065_2104424_-	hypothetical protein	B3RH36	Bacillus_virus	6.1e-75	39.5
WP_114895447.1\|2104709_2104919_+	XRE family transcriptional regulator	A0A0S2SXH7	Bacillus_phage	4.8e-16	66.7
WP_114895448.1\|2104929_2105133_+	XRE family transcriptional regulator	Q2I8E4	Bacillus_phage	2.0e-11	47.6
WP_114895449.1\|2105364_2105547_-	hypothetical protein	NA	NA	NA	NA
WP_114897396.1\|2105665_2106481_-	N-acetylmuramoyl-L-alanine amidase	A0T2N4	Geobacillus_phage	1.3e-61	66.3
WP_114895450.1\|2106854_2107925_+	hypothetical protein	NA	NA	NA	NA
WP_114895451.1\|2108079_2109450_-	hypothetical protein	A0A0A0RV08	Bacillus_phage	6.5e-16	52.3
WP_114895452.1\|2109519_2110158_-\|holin	holin	A0A0M4R5G6	Bacillus_phage	2.1e-22	44.8
WP_114895453.1\|2110178_2110418_-	hypothetical protein	NA	NA	NA	NA
WP_114895454.1\|2110521_2110713_-	hypothetical protein	NA	NA	NA	NA
WP_114895455.1\|2110709_2110961_-	hypothetical protein	NA	NA	NA	NA
WP_114895456.1\|2110964_2113571_-	hypothetical protein	G3MAG1	Bacillus_virus	3.3e-29	28.8
WP_114895457.1\|2113582_2113879_-	hypothetical protein	NA	NA	NA	NA
WP_114895458.1\|2113880_2114777_-	hypothetical protein	E5DV65	Deep-sea_thermophilic_phage	5.1e-22	42.9
WP_114895459.1\|2114773_2115910_-	hypothetical protein	A0A1L2JY69	Aeribacillus_phage	1.6e-81	42.8
WP_114895460.1\|2115884_2116247_-	DUF2634 domain-containing protein	A0A2H4J4S8	uncultured_Caudovirales_phage	1.8e-21	49.6
WP_114895461.1\|2116243_2116579_-	hypothetical protein	NA	NA	NA	NA
WP_114895462.1\|2116578_2117406_-	hypothetical protein	A0A1L2JY62	Aeribacillus_phage	1.5e-92	62.6
WP_114895463.1\|2117402_2117756_-	hypothetical protein	A0A2H4J6L1	uncultured_Caudovirales_phage	1.6e-32	58.7
WP_114895464.1\|2117770_2118316_-	LysM peptidoglycan-binding domain-containing protein	A0A2H4JD33	uncultured_Caudovirales_phage	7.6e-45	53.0
WP_114895465.1\|2118327_2119161_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_114895466.1\|2119389_2124798_-	hypothetical protein	I1TLF1	Bacillus_phage	1.2e-84	40.6
WP_114897397.1\|2125022_2125325_-	hypothetical protein	NA	NA	NA	NA
WP_114895467.1\|2125435_2125828_-	DUF3277 family protein	NA	NA	NA	NA
WP_114895468.1\|2125847_2126849_-	DUF3383 family protein	A0A1L2JZ70	Aeribacillus_phage	6.7e-95	53.8
WP_114895469.1\|2126861_2127341_-	hypothetical protein	A0A1L2JY58	Aeribacillus_phage	5.3e-26	37.3
WP_114895470.1\|2127337_2127703_-	hypothetical protein	A0A1L2JY57	Aeribacillus_phage	1.5e-28	55.3
WP_114895471.1\|2127702_2128305_-	hypothetical protein	A0A1L2JY56	Aeribacillus_phage	6.0e-59	59.7
WP_114895472.1\|2128301_2128631_-	hypothetical protein	A0A1L2JY52	Aeribacillus_phage	7.4e-27	60.6
WP_114895473.1\|2128620_2128833_-	hypothetical protein	NA	NA	NA	NA
WP_114895474.1\|2128988_2129921_-	hypothetical protein	A0A2P1CGV3	Mycobacterium_phage	9.7e-48	36.7
WP_114895475.1\|2129947_2130715_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_114895476.1\|2130873_2131530_-	hypothetical protein	NA	NA	NA	NA
WP_114895477.1\|2131888_2132614_+	DUF4145 domain-containing protein	M1PSB6	Streptococcus_phage	9.9e-24	36.8
WP_114895478.1\|2132905_2133727_-	hypothetical protein	NA	NA	NA	NA
WP_114895479.1\|2133902_2134826_-	hypothetical protein	A0A1L2JY53	Aeribacillus_phage	3.4e-53	37.9
WP_114895480.1\|2134788_2136153_-\|portal	phage portal protein	I1TJV4	Clostridium_phage	9.5e-60	37.6
WP_114897398.1\|2136166_2137465_-\|terminase	PBSX family phage terminase large subunit	A0A0S2MVC1	Bacillus_phage	3.5e-197	77.4
WP_114895481.1\|2137490_2138423_-\|terminase	terminase	E5DV49	Deep-sea_thermophilic_phage	2.4e-75	52.9
WP_114895482.1\|2138585_2139272_-	hypothetical protein	NA	NA	NA	NA
WP_114895483.1\|2140510_2140894_-	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	2.2e-30	62.9
WP_114895484.1\|2141098_2142259_-	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	8.1e-60	33.8
WP_114895485.1\|2142242_2142896_-	hypothetical protein	NA	NA	NA	NA
WP_114897399.1\|2142970_2143129_-	DUF3954 domain-containing protein	NA	NA	NA	NA
WP_114895486.1\|2143685_2143841_+	aspartyl-phosphate phosphatase Spo0E family protein	NA	NA	NA	NA
WP_114897400.1\|2143892_2144072_-	hypothetical protein	B3RH30	Bacillus_virus	1.1e-13	56.4
WP_114895487.1\|2144058_2144754_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_114895488.1\|2144775_2145222_-	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	3.8e-50	67.9
WP_114895489.1\|2145226_2145412_-	Fur-regulated basic protein FbpA	A0A0S2SXY0	Bacillus_phage	2.6e-05	58.1
WP_114895490.1\|2145392_2145578_-	hypothetical protein	NA	NA	NA	NA
WP_114895491.1\|2145570_2146890_-	replicative DNA helicase	D2XR44	Bacillus_phage	8.8e-95	44.4
WP_114895492.1\|2146900_2147254_-	hypothetical protein	NA	NA	NA	NA
WP_114895493.1\|2147240_2147975_-	hypothetical protein	NA	NA	NA	NA
WP_114897401.1\|2148157_2149099_-	hypothetical protein	Q38143	Bacillus_phage	8.3e-55	42.2
WP_114895494.1\|2149106_2150045_-	hypothetical protein	S6C475	Thermus_phage	1.4e-126	72.1
WP_114895495.1\|2150147_2150366_-	hypothetical protein	NA	NA	NA	NA
WP_114895496.1\|2150694_2150931_-	hypothetical protein	NA	NA	NA	NA
WP_114895497.1\|2150927_2151440_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_114897402.1\|2151548_2151833_-	DNA-binding protein	NA	NA	NA	NA
WP_114895498.1\|2152294_2152915_+	hypothetical protein	NA	NA	NA	NA
WP_114895499.1\|2153088_2153334_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_114895500.1\|2153461_2153908_+	XRE family transcriptional regulator	A8ATJ9	Listeria_phage	1.7e-26	48.3
WP_114895501.1\|2153914_2154352_+	ImmA/IrrE family metallo-endopeptidase	D6R412	Bacillus_phage	3.6e-37	51.1
WP_114895502.1\|2154753_2155437_+	DUF3862 domain-containing protein	U5J9H5	Bacillus_phage	3.6e-15	54.7
2154865:2154881	attL	NA	NA	NA	NA
WP_114895503.1\|2155535_2156420_+	TIR domain-containing protein	S6BFN8	Thermus_phage	1.9e-37	36.1
WP_114895504.1\|2156388_2156616_-	hypothetical protein	S6AVX7	Thermus_phage	5.6e-18	59.2
WP_114897403.1\|2156868_2158008_+\|integrase	site-specific integrase	S6C485	Thermus_phage	1.7e-115	56.5
WP_114894721.1\|2159520_2160670_+\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	1.0e-38	63.0
2158308:2158324	attR	NA	NA	NA	NA
WP_114895505.1\|2161157_2161694_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_074896973.1\|2161902_2162448_-	cupin domain-containing protein	NA	NA	NA	NA
WP_114895506.1\|2162596_2163946_+	D-serine ammonia-lyase	NA	NA	NA	NA
WP_114895507.1\|2164062_2164236_-	IDEAL domain-containing protein	NA	NA	NA	NA
WP_114895508.1\|2164727_2166167_-	amino acid permease	NA	NA	NA	NA
WP_075422560.1\|2166457_2167612_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA
WP_114895509.1\|2167628_2168732_-	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	1.8e-21	27.9
WP_114895510.1\|2168904_2170191_-	fumarylacetoacetase	NA	NA	NA	NA
WP_114897404.1\|2170187_2171168_-	hypothetical protein	NA	NA	NA	NA
WP_055991956.1\|2171267_2172389_-	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA
WP_114895511.1\|2172648_2172960_+	DUF1450 domain-containing protein	NA	NA	NA	NA
WP_114897405.1\|2173226_2173691_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_114895512.1\|2174166_2175033_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_114895513.1\|2175174_2175999_+	hypothetical protein	NA	NA	NA	NA
WP_114895514.1\|2177089_2177596_-	DUF3189 family protein	NA	NA	NA	NA
WP_114895515.1\|2178108_2178495_+	VOC family protein	NA	NA	NA	NA
WP_013060045.1\|2178652_2178901_-\|coat	spore coat protein	NA	NA	NA	NA

DBSCAN-SWA_3

3914421 : 3923728

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114896699.1\|3914421_3915939_-	ATP-dependent DNA helicase RecQ	G5CQD7	Megavirus	1.7e-54	32.0
WP_114896700.1\|3915962_3917012_-	recombinase RecQ	NA	NA	NA	NA
WP_013059046.1\|3917269_3917518_+	ferredoxin	A0A127AYY7	Bacillus_phage	3.6e-18	54.1
WP_028411530.1\|3917599_3918175_-	ECF transporter S component	NA	NA	NA	NA
WP_114896701.1\|3918771_3920346_+	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	7.6e-29	30.2
WP_114896702.1\|3920378_3921068_-	LysM peptidoglycan-binding domain-containing protein	A0A2D0ZM66	Rhodococcus_phage	3.0e-14	40.7
WP_114896703.1\|3921239_3923012_-	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.5e-25	26.5
WP_013059051.1\|3923011_3923728_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.2e-47	42.2

DBSCAN-SWA_4

4798503 : 4808971

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114897455.1\|4798503_4799736_-	PDZ domain-containing protein	A0A1B1IRD3	uncultured_Mediterranean_phage	6.2e-10	30.1
WP_014457688.1\|4799793_4800588_-	MBL fold metallo-hydrolase	A0A2H4J3R0	uncultured_Caudovirales_phage	5.4e-39	35.1
WP_114897067.1\|4800606_4801386_-	regulator	NA	NA	NA	NA
WP_028411920.1\|4801372_4802740_-	hypothetical protein	NA	NA	NA	NA
WP_045293916.1\|4802730_4804638_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	2.6e-39	36.5
WP_013085552.1\|4804644_4805352_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.4e-46	42.0
WP_013085553.1\|4806132_4807419_-	adenylosuccinate synthase	A0A2P1EKE7	Megavirus	2.1e-69	35.9
WP_013059909.1\|4807606_4808971_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.5e-121	52.1

DBSCAN-SWA_5

5077910 : 5086172

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063248488.1\|5077910_5079203_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.5e-19	25.5
WP_028412531.1\|5079277_5079985_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FGF0	Synechococcus_phage	1.6e-42	39.7
WP_014461938.1\|5079992_5080244_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_114897141.1\|5080240_5080927_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_114897142.1\|5080910_5083142_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.4e-156	40.6
WP_013055041.1\|5083117_5084533_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.3e-55	34.6
WP_045292052.1\|5084559_5085597_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F0L1	Synechococcus_phage	1.3e-69	45.0
WP_114897143.1\|5085593_5086172_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.2e-29	39.2

DBSCAN-SWA_6

5402804 : 5442880

Bacillus_phage(71.43%)

portal,capsid,head,terminase,protease,tail,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114897312.1\|5402804_5404229_-	recombinase family protein	A0A2H4J3Q1	uncultured_Caudovirales_phage	2.8e-179	64.4
WP_114897313.1\|5404240_5404897_-	XRE family transcriptional regulator	A0A1B1P7L1	Bacillus_phage	1.8e-85	68.9
WP_114897314.1\|5405095_5405329_+	XRE family transcriptional regulator	A0A2H4JAQ9	uncultured_Caudovirales_phage	3.4e-26	78.7
WP_114897315.1\|5405570_5405942_+	hypothetical protein	A0A0S2SXQ5	Bacillus_phage	3.8e-64	93.5
WP_114897316.1\|5406035_5406587_+	hypothetical protein	A0A0S2SXN7	Bacillus_phage	1.0e-92	98.4
WP_114897317.1\|5406589_5407282_+	DNA-binding protein	A0A1B2AQ06	Phage_Wrath	5.4e-104	80.7
WP_114897318.1\|5407281_5407758_+	DUF669 domain-containing protein	A0A1B2AQ07	Phage_Wrath	2.2e-32	48.4
WP_114897319.1\|5407833_5410188_+	DNA primase	A0A1B2AQ05	Phage_Wrath	0.0e+00	81.0
WP_114897320.1\|5410450_5410882_+	hypothetical protein	A0A2H4JFQ6	uncultured_Caudovirales_phage	1.5e-51	65.5
WP_114897321.1\|5410886_5411426_+	nuclease	A0A0S2SXQ1	Bacillus_phage	1.5e-53	57.6
WP_114897322.1\|5411451_5411601_+	Fur-regulated basic protein FbpA	A0A0S2SXY0	Bacillus_phage	5.5e-06	54.8
WP_114897460.1\|5411998_5412430_+	transcriptional regulator	A0A0S2SXN1	Bacillus_phage	6.9e-65	88.8
WP_114897323.1\|5412459_5413125_-	hypothetical protein	NA	NA	NA	NA
WP_114897324.1\|5413594_5413774_-	hypothetical protein	NA	NA	NA	NA
WP_114897325.1\|5413926_5414106_+	hypothetical protein	NA	NA	NA	NA
WP_114897326.1\|5414183_5414705_+	hypothetical protein	NA	NA	NA	NA
WP_114897327.1\|5414815_5415115_+	HNH endonuclease	A0A0S2SXR6	Bacillus_phage	7.1e-37	78.2
WP_114897328.1\|5415101_5415329_+	hypothetical protein	NA	NA	NA	NA
WP_114897329.1\|5415410_5415785_+	hypothetical protein	A0A0S2SXN4	Bacillus_phage	7.3e-63	99.2
WP_114897330.1\|5415781_5417500_+\|terminase	terminase large subunit	A0A0S2SXJ7	Bacillus_phage	0.0e+00	99.1
WP_114897331.1\|5417517_5418681_+\|portal	phage portal protein	A0A1S5S8H6	Streptococcus_phage	1.7e-126	55.8
WP_114897461.1\|5418696_5419254_+\|head,protease	HK97 family phage prohead protease	A0A0S2SXJ4	Bacillus_phage	1.0e-97	95.7
WP_114897332.1\|5419246_5420416_+\|capsid	phage major capsid protein	A0A0S2SXJ6	Bacillus_phage	1.7e-187	96.9
WP_114897333.1\|5420439_5420634_+	hypothetical protein	A0A0S2SXV2	Bacillus_phage	6.3e-18	78.2
WP_114897334.1\|5420626_5420914_+	hypothetical protein	A0A0S2SXS0	Bacillus_phage	7.1e-42	92.6
WP_114897335.1\|5420804_5421224_+	hypothetical protein	A0A0S2SXM4	Bacillus_phage	2.1e-42	78.1
WP_114897336.1\|5421223_5421598_+	hypothetical protein	A0A0S2SXK7	Bacillus_phage	1.2e-60	99.2
WP_114897337.1\|5421594_5421933_+	hypothetical protein	A0A0S2SY15	Bacillus_phage	1.7e-58	98.2
WP_114897338.1\|5421949_5422546_+\|tail	phage tail protein	A0A0S2SXT6	Bacillus_phage	2.6e-99	90.8
WP_114897339.1\|5422607_5422973_+	hypothetical protein	A0A0S2SXQ2	Bacillus_phage	3.2e-55	90.9
WP_114897340.1\|5422935_5423145_+	hypothetical protein	A0A0S2SXL3	Bacillus_phage	4.7e-11	66.7
WP_114897341.1\|5423160_5428059_+	hypothetical protein	A0A0S2SXL7	Bacillus_phage	0.0e+00	76.5
WP_114897342.1\|5428060_5429512_+	hypothetical protein	A0A0S2GLF9	Bacillus_phage	8.5e-75	34.0
WP_114897343.1\|5429508_5436066_+	hypothetical protein	A0A142F1N2	Bacillus_phage	4.7e-88	38.5
WP_114897344.1\|5436125_5436365_+	hypothetical protein	NA	NA	NA	NA
WP_114897345.1\|5436414_5436780_+	hypothetical protein	A0A2H4J980	uncultured_Caudovirales_phage	1.1e-07	29.6
WP_114894125.1\|5436842_5437058_+\|bacteriocin	bacteriocin uviB	A0A0S2SXR1	Bacillus_phage	4.2e-23	76.5
WP_114894126.1\|5437108_5438122_+	LysM peptidoglycan-binding domain-containing protein	A0A0S2SXM5	Bacillus_phage	4.1e-153	79.2
WP_114894127.1\|5438179_5438371_-	hypothetical protein	NA	NA	NA	NA
WP_114894128.1\|5438413_5439457_-	serine/threonine protein kinase	B0FEC2	Escherichia_phage	1.2e-57	40.7
WP_114894129.1\|5439460_5439940_-	hypothetical protein	G9L674	Escherichia_phage	1.7e-11	30.1
WP_114894130.1\|5440152_5440335_+	hypothetical protein	NA	NA	NA	NA
WP_114897346.1\|5440499_5440784_-	hypothetical protein	NA	NA	NA	NA
WP_114897347.1\|5441860_5442880_+	cell division protein FtsK	A0A0S2GLG9	Bacillus_phage	2.9e-61	41.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022674

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection