CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP030124	Streptococcus suis strain SH1510 chromosome, complete genome	5 crisprs	cas3,csa3,RT,DinG,DEDDh	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP030124_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030124_1

16754-16889

Unclear

Consensus_repeat	Method
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP030124_1

>merge|NZ_CP030124|1|16754-16889|CRISPRCasFinder
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAAGACCATCAGAAGATGATAGACTGATTGAGTTGTCTCTTGAGGGACTAGTTAACAGAGGAACGAAAAAAAGTTTCAAAAAAGTGTTGACAA

>NZ_CP030124|1|1|16754-16889|CRISPRCasFinder
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAA	GACCATCAGAAGATGATAGACTGATTGAGTTGTCTCTTGAGGGA
CTAGTTAACAGAGGAACGAAAAAAAGTTTCAAAAAAGTGTTGACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030124.1\|WP_014637254.1\|30708_30957_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|183533
NZ_CP030124.1\|WP_024394588.1\|10633_11914_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|379138
NZ_CP030124.1\|WP_011921633.1\|5770_6340_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_CP030124.1\|WP_002935337.1\|26709_27678_+\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|167353
NZ_CP030124.1\|WP_024394838.1\|25350_26607_+\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226400
NZ_CP030124.1\|WP_024394837.1\|24750_25266_+\|rod-shape-determining-protein-MreD	unknown	unknown	gnl\|CDD\|282013
NZ_CP030124.1\|WP_024394841.1\|31074_31782_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|181800
NZ_CP030124.1\|WP_024394839.1\|27764_28943_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235985
NZ_CP030124.1\|WP_023368964.1\|6339_9834_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_CP030124.1\|WP_004194327.1\|10142_10511_+\|septum-formation-initiator-family-protein	unknown	unknown	gnl\|CDD\|225471
NZ_CP030124.1\|WP_014735203.1\|13190_13733_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP030124.1\|WP_044675272.1\|31794_35514_+\|phosphoribosylformylglycinamidine-synthase	unknown	unknown	gnl\|CDD\|130916
NZ_CP030124.1\|WP_014637253.1\|29708_30716_+\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP030124.1\|WP_024394587.1\|4497_5613_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP030124.1\|WP_024394840.1\|28929_29712_+\|DNA-repair-protein-RecO	unknown	unknown	gnl\|CDD\|273175
NZ_CP030124.1\|WP_024394836.1\|23924_24761_+\|rod-shape-determining-protein-MreC	unknown	unknown	gnl\|CDD\|237560
NZ_CP030124.1\|WP_004194330.1\|9883_10156_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NZ_CP030124.1\|WP_024394589.1\|11914_13183_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP030124.1\|WP_024394590.1\|13754_15725_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl\|CDD\|223541
NZ_CP030124.1\|WP_002936602.1\|16062_16533_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357

Protein	Function_ID	Function_description	E-value
NZ_CP030124.1\|WP_014637254.1\|30708_30957_+\|acyl-carrier-protein	gnl\|CDD\|183533	PRK12449, PRK12449, acyl carrier protein; Provisional.	3.3013e-17
NZ_CP030124.1\|WP_024394588.1\|10633_11914_+\|serine-hydrolase	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.27383e-43
NZ_CP030124.1\|WP_011921633.1\|5770_6340_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	6.27614e-97
NZ_CP030124.1\|WP_002935337.1\|26709_27678_+\|ribose-phosphate-diphosphokinase	gnl\|CDD\|167353	PRK02269, PRK02269, ribose-phosphate diphosphokinase.	0
NZ_CP030124.1\|WP_024394838.1\|25350_26607_+\|CHAP-domain-containing-protein	gnl\|CDD\|226400	COG3883, COG3883, Uncharacterized protein conserved in bacteria [Function unknown].	1.12494e-51
NZ_CP030124.1\|WP_024394837.1\|24750_25266_+\|rod-shape-determining-protein-MreD	gnl\|CDD\|282013	pfam04093, MreD, rod shape-determining protein MreD. MreD (murein formation D) is involved in the rod shape determination in E. coli, and more generally in cell shape determination of bacteria whether or not they are rod-shaped.	0.000982627
NZ_CP030124.1\|WP_024394841.1\|31074_31782_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|181800	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed.	8.87669e-144
NZ_CP030124.1\|WP_024394839.1\|27764_28943_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235985	PRK07309, PRK07309, pyridoxal phosphate-dependent aminotransferase.	0
NZ_CP030124.1\|WP_023368964.1\|6339_9834_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP030124.1\|WP_004194327.1\|10142_10511_+\|septum-formation-initiator-family-protein	gnl\|CDD\|225471	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning].	3.84819e-14
NZ_CP030124.1\|WP_014735203.1\|13190_13733_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	2.26908e-93
NZ_CP030124.1\|WP_044675272.1\|31794_35514_+\|phosphoribosylformylglycinamidine-synthase	gnl\|CDD\|130916	TIGR01857, FGAM-synthase, phosphoribosylformylglycinamidine synthase, clade II. This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This model represents a second clade of these enzymes found in Clostridia, Bifidobacteria and Streptococcus species. This enzyme performs the fourth step in IMP biosynthesis (the precursor of all purines) from PRPP. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis].	0
NZ_CP030124.1\|WP_014637253.1\|29708_30716_+\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	2.59586e-174
NZ_CP030124.1\|WP_024394587.1\|4497_5613_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP030124.1\|WP_024394840.1\|28929_29712_+\|DNA-repair-protein-RecO	gnl\|CDD\|273175	TIGR00613, DNA_repair_protein_RecO, DNA repair protein RecO. All proteins in this family for which functions are known are DNA binding proteins that are involved in the initiation of recombination or recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	1.35775e-78
NZ_CP030124.1\|WP_024394836.1\|23924_24761_+\|rod-shape-determining-protein-MreC	gnl\|CDD\|237560	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional.	2.34741e-52
NZ_CP030124.1\|WP_004194330.1\|9883_10156_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	4.26063e-31
NZ_CP030124.1\|WP_024394589.1\|11914_13183_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	4.74019e-74
NZ_CP030124.1\|WP_024394590.1\|13754_15725_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl\|CDD\|223541	COG0465, HflB, ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP030124.1\|WP_002936602.1\|16062_16533_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	0.0029598

>NZ_CP030124.1|WP_002936602.1|16062_16533_+|sigma-70-family-RNA-polymerase-sigma-factor
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEAQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKRKFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR
>NZ_CP030124.1|WP_024394590.1|13754_15725_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MNNQPNKGFIKNPFLIILVIATIVTAFQFFNAGQQVATQEISYSQVVTELKNNNVSEITYQPNSSVIEITGKYKTEQEAKDELASSIKLFQVSSKVKYKNFKSLILPSETNLSELQALANENGVKVTIKPESSNGLWLNIVFNLLPLIIAGVFFMMMMNQGGGARGAMNFGRNKAKALEQSNIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGMGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAADVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKTVIDASDIDEAEDRVIAGPSKKDRQVSAKEREIVAYHEAGHTIVGLVLSNAREVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNTQTTGASNDFEQATQMARAMVAEYGMSEKMGPMQYEGSHAMFGGQTTHKHISEQTAYELDNEVRDLLNEARNKAADIIQSNRDTHKLIAEALLKYETLDSVQIKSLYETGKMPENIECDDEDVHPLSYEEVKEKINTKE
>NZ_CP030124.1|WP_014735203.1|13190_13733_+|hypoxanthine-phosphoribosyltransferase
MLDKDIKKILVSEEEIVAKCKELGQILATDYADKNPILVGILKGSIPFMAELMKHIDAHVETDYMVVSSYHGGTESSGTVKIIKDLDNSVAGRHIIFVEDIIDTGRTLKELKELFALRQAASIKIATLLDKPEGRVVEIEPDYTCFTIPNEFVVGFGLDYDENYRNLPYVGVLKEEVYTK
>NZ_CP030124.1|WP_024394589.1|11914_13183_+|tRNA-lysidine(34)-synthetase-TilS
MKDRFLKVTLDGHFFDKHKKVLVAVSGGLDSMNLFHLLYECKQVLGIELGIAHINHGQREESVIEEKYLKQLAEESNVPFYLSYFEGVFSEEAARKWRYGFFATIMEKEGYTALVTAHHADDQAETVFMRLIRGGRLRHLSAIQPTQPFATGELIRPLLSFKKADFEKLFHFEDCSNTDFKYFRNRVRNDYLPKLKQENPKIELTLNNLAVDTNNLFQALRDLTQDLSVTDVMSFQQQTPAVQSYLLEEYLEKFPDLQLSRPQFNEVLHILRSKANYYHLLKNDYMLEKDYHRFQIYKIGPETDSQPEKIMIKSEGIFSYGSYIFSLNHPLEEADSILYFPTENPIVVRRRQAGDTILINGVNKKLRRWFIDNKISQKVRQNALIIEQNGEIYGITNLVSSDLSKSVKNDIIKATLYIKMKE
>NZ_CP030124.1|WP_024394588.1|10633_11914_+|serine-hydrolase
MQKKLLVWLLPVLFGWQVVDSTEIPFELTAQEEYELTHTIYDQYFQTIPQNPNVFQTENLYSDEELTIAGGQLQPNQHFSITDVLVNSKKELVFQIDDKGYILASRHLLFDDVIVTETTVEQTYWTKKGFALLTSPIANEATEIKNDLQPYQAVMVSKIVTTSLGDFAYVTDKGWIAVNNLSKTDNRVEAVQELLTNKYSKDTIGIYVKQLSTGQTAGVNQEKLFYSASIAKLPILYYVQEQLNAGYIDLTTKVKYTAESISFPGAYVAGGSGSLSKTPDNKDYSVEELINKTAKESDNVASNLLSYYVANKFDSNFYQVITAKTGSEWSMVTRETSAEIAGKMMEALYIQNGYVLESLLSTQFDNQRISKDLSVPVAHKIGDADDVKHDVAIVYAGSPFVLSIFTDKSNYDEITQIANDIYGILK
>NZ_CP030124.1|WP_004194327.1|10142_10511_+|septum-formation-initiator-family-protein
MKKSKILQLNNAFIQSERKKTQHQLAERQQKNRFMGAILILVIFLFMLPAYNLVGTYTNIQQQEKKLAELEKNYEELTKEQKQEAEMVAKLKNEEYAAKYVRAKYQYSKEGEFVYNIPGLPK
>NZ_CP030124.1|WP_004194330.1|9883_10156_+|RNA-binding-S4-domain-containing-protein
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIQFGNKLLTVKVLEMKDSTKKEDALKMYEIISEKRIEKDEEI
>NZ_CP030124.1|WP_023368964.1|6339_9834_+|transcription-repair-coupling-factor
MNILDLLHKNKQINQWQSGLNQSTRQLLLGLSGTSKSLIMATAYDCLAEKIMIVTATQNDAEKLVADLTAIIGSENVYNFFTDDSPIAEFVFASKERTQSRIDSLNFLTDSTSSGILVASMVACRVLLPSPETYKGSKIQLEVGQEIEVDKLVKNLVNIGYKKVSRVLTQGEFSQRGDILDIFDMQSETPYRIEFFGDEIDGIRIFDVDSQKSLENLDEISISPASDIILSSEDYSRASQYIQTAIEQSTLEEQQSYLREVLADMQTEYRHPDLRKFLSCIYEQSWTLLDYLPKSSPLFLDDFHKIADKQAQFEKEIADLLTDDLQKGKTVSSLKYFASTYAELRKYKPATFFSSFQKGLGNVKFDALYQFTQHPMQEFFHQIPLLKDELTRYAKSNNTVVIQASSDVSLQTLQKNLQEYDIHLPVHAADKLVEGQQQVTIGQLASGFHLMDEKLVFITEKEIFNKKMKRKTRRTNISNAERIKDYSELAVGDYVVHHVHGIGQYLGIETIEISGIHRDYLTVQYQNSDRISIPVEQIDLLSKYLASDGKAPKVNKLNDGRFQRTKQKVQKQVEDIADDLIKLYAERSQLKGFAFSPDDENQVEFDNYFTHVETDDQLRSIDEIKKDMEKDSPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAQQHYANFQERFAEFPVNVDVMSRFKTKAEQEKTLEKLKKGQVDILIGTHRLLSKDVVFADLGLLVIDEEQRFGVKHKERLKELKKKIDVLTLTATPIPRTLQMSMLGIRDLSVIETPPTNRYPVQTYVMETNPSVIRDAMLREIDRGGQVYYLYNKVDTIEQKVSELKELVPEATIGYVHGQMSEIQLENTLYAFVEGEYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSSRIAYAYLMYRPDKSLTEVAEKRLEAIKGFTELGSGFKIAMQDLSIRGAGNILGAAQSGFIDSVGYEMYSQLLEQAILEKQGKATQRQKSNSEVNLQIDAYLPSDYIGDQRQKIEIYKRIKNIDSRVNYQELQEELIDRFGEYPDVVAYLLEIGLLKSFLDQVFCHTVLRRQHQVTVTFEPMAGQIFLTQDYFEALSVTNLKAQITENKGKLAVVFNIQQKKEYEILEELISFAEKLKEIKARKAE
>NZ_CP030124.1|WP_011921633.1|5770_6340_+|aminoacyl-tRNA-hydrolase
MTRLIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFNHDKIFQADIATTFIDGEKIYLVKPTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHIGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFDTVMRKFNG
>NZ_CP030124.1|WP_024394587.1|4497_5613_+|redox-regulated-ATPase-YchF
MSLTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELIIPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPIADIDTINLELILADLESINKRYARVEKMARTQKDKDSVAEFAVLEKIKPVLEDGKSARTVEFTDEEQKIVKQLFLLTTKPVLYVANVDEDKVADPESISYVQQIRDFAATENAEVVVISARAEEEISELDDEDKGEFLEELGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGTKAPQCAGIIHSDFEKGFIRAVTMSYDDLMTYGSEKAVKEAGRLREEGKEYVVQDGDIMEFRFNV
>NZ_CP030124.1|WP_024394836.1|23924_24761_+|rod-shape-determining-protein-MreC
MNKFSKLVVVVSIFLLLSFSLLFVTFSKGLQVPYLNNIVRVVVTPIQSVISVPTRFFSEQKDVLTDLVNAYEENKQLKEAIMSLEGMAAENTSLKEENASLRSSLGVVSVFPEKQLIPGSVLVRTPSSWSEHISINIGETSGVTSNALVVANGGLVGIVSSLSSDSAVVTLFTNSDEFTKLPVKISVDSKEIYGILSGYDADTNSFIINQLNSADEIAVGSNVVTSDLAGATPANVQIGKVLSVKSNSNSLNREVYVEPTASFSNIYSVLVVGQTNAQ
>NZ_CP030124.1|WP_024394837.1|24750_25266_+|rod-shape-determining-protein-MreD
MRNKMIEIFMFPILFFILLLDGQISTLVTNWSVGLFTISSHLVLMLAIFYANYVSLGFSLFIFTLLGLVYDISYLSLIGIATTTLPLVLYCIYFFFQGAVSKRGINILILLVAIFQFEFISYSFARIFHITNLSVFIFVFNKLLPSLLFNLALFFVLQPLFERLFGITNKT
>NZ_CP030124.1|WP_024394838.1|25350_26607_+|CHAP-domain-containing-protein
MKKKILATIMLSTVVLSNANYVAVISANDVDSQIAAKNQQISELTAQQAEAQQQVDAIQGQVDAIVSEQAKLTEENTRLEAESQTLAADIERLSADIVSRDGALKEQARSAQVDGSASSYINTILDSKSIVDAVSRVNAMREIVSANNRMLEQQKADKEAIVEKQKANQEAITTLAANRQKLEDDAQVLQVRQAELEAAKLNLAVQKATAEDEKNSLLAQKAAAEEAARQAAARQAEYQAQQAALAQQQVASVSAPVVSTPVETTVTETVAAPTQTVSQSTPTVSTPTTSTSSGSGSSAAANNARYDASSYPVGECTWGVKSQLSWVGPYWGDAKQWLASARAEGFSTGSTPQVGAIAVWTGGYYGHVAVVTAVQSSTSIQVVESNYMGRRYIGNHRGGYFNPTTTSEGAVYYIYPPY
>NZ_CP030124.1|WP_002935337.1|26709_27678_+|ribose-phosphate-diphosphokinase
MAFTDLKLFALSSNQKLAEQVSKKIGIPLGKSSVRQFSDGEIQVNIEESIRGTHVYILQSTSSPVNDNLMEILIMVDALKRASAESVNVVMPYYGYARQDRKARAREPITSKLVANMLQTAGVNRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERRGMVGDGYVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKMNTSEVMNIIGDIKDKTCILIDDMIDTAGTICHAADALADAGATAVYASCTHPVLSGPAMDNISKSAIKKLVVLDTIEIAEDRLIDKIEHISTAELLAEAIIRIHEKRPLSPLFEASRVK
>NZ_CP030124.1|WP_024394839.1|27764_28943_+|pyridoxal-phosphate-dependent-aminotransferase
MDLLNRFNKNLNRIEVSMIRQFDQSISDVPGILKLTLGEPDFTTPDHVKEAAKAAIDANKSYYTGMAGLLELRQAAAEFVAEKYNLHYNPDTEILSTIGATEALSASLVAILEAGDTVLLPAPAYPGYEPIVNMVGADIVEIDTTANDFILTPEMLEEAIIEQGDKLKAVILNYPANPTGVTYSREQIQAFADVLRKYPVFVLSDEVYAELTYTGQPHTSIAEFLPEQTILIQGLSKSHAMTGWRIGLIMSQAPIIAQIIKSHQYLVTAASTAMQYGAVEALKNGKDDALPMRAEYVKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDSFSFLQDFARKKAVAFIPGAAFGQYGEGYVRISYAASMEKIQTAMARLKEYLEENGTN
>NZ_CP030124.1|WP_024394840.1|28929_29712_+|DNA-repair-protein-RecO
MERIETRGLVLYNRNFREDDKLVKIFTEKAGKRMFFVKHASKSRLVASIQPLTYADFIVKINDDGLSYIEDFHQVQPFKNINGDIFKLSYATYILALADAALQDKVYDPALFAFLVKTLDLMESGLDYEVLTNIFEIQLLGRFGISLNFHECAFCHRVGLPFDYSYKYSGVLCPQHYQQDERRAYLDPNVPYLLDQFQAISFDELETISIKPEMKRKLRFFIDQLYEEYVGIHLKSKKFIDDLSSWGQIMKPRTENEETE
>NZ_CP030124.1|WP_014637253.1|29708_30716_+|phosphate-acyltransferase-PlsX
MKRIAVDAMGGDHAPQAVVEGVNQALAAFPDIEIQLYGDEAKIKQYLTVTERVSIVHTTEKINSDDEPVKAIRRKKEASMVLATKAVKDGQADAVLSAGNTGALLAAGVFVVGRIKNIDRPGLMSTLPTMDGKGFDMMDLGANAENTAHHLYQYGILGSFYAEHVRGVKQPRVGLLNNGTEDTKGTPVHQEAYKLLAEDKSINFIGNVEARELLNSVADVVVTDGFTGNAVLKTVEGTAKSIVGQLTGSIKSGGLRAKLGGLLVKPTLKKALGAMDYKTAGGAVLLGLKAPVIKAHGSSDAQSIFYTIKQTRSILEAGIVEKSVAKFSVVEESHD
>NZ_CP030124.1|WP_014637254.1|30708_30957_+|acyl-carrier-protein
MTREQVYQRVVELIQDEKGEDFQVQPESTLADNIAADSVEIMEFVLNLEDEFHVDVPDAAIEHFEVLSDIVDFIYEEVKKRS
>NZ_CP030124.1|WP_024394841.1|31074_31782_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MKTDLLYSGKAKDIYATADSDQIVAVYKDQATAFNGGKKEQIVGKGRLNNLISSLIFEKLNVAGVKTHFIKRLSDTEQLNRKVEIIPLEVVLRNVTAGSFSKRFGVEEGIALPTPIVEFYYKKDELDDPFINDEHIAFLNLASSEEIAYIKEETRRINSFLKDLFAQIGLTLVDFKLEFGIDSSGQIVLADEFSPDNCRLWDADGNHLDKDVFRRGLGELTEVYEVVLAKLQEVK
>NZ_CP030124.1|WP_044675272.1|31794_35514_+|phosphoribosylformylglycinamidine-synthase
MAKRIFVEKKADFQIKAEALRKELTHNLQLTSLSSLRLVQVYDVFHLEEDLLEQAVKHIFTEQVTDKVLSDEELGLEGAVYFAIEALPGQFDQRAASSQEALLLLGSRQEVRVNTGQLYILNGDVREEELAAIKNYLLNPVDSRFKDMDAPLVAQEFSVSDTVIPSLDFFDSYGAEEFASYKREAGLAMEVEDLLFIQDYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELRSIDFSASKFHKQLQATYDKYLAMRTELGRTDKPQTLMDMATIFGRYERANGRLDDMEVSDEINACSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMRISGAGDITQPLTATRSGKLPQQIISKTAAHGYSSYGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKENVVREKPVAGDVVILLGGKTGRDGIGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRNGDVTRLIKKSNDFGAGGVCVAIGELADGLEIDLDKVPLKYAGLNGTEIAISESQERMSVVVRPEDVDAFIAACREENIHAVVVAKVTEKPNLVMTWNGQTIVDLERSFLDTNGVRVVVDAKVVDSSVKLPETRRTSAETLQEDLKDLLSDLNHTSQKGLQTIFDSSVGRSTVNHPLGGRHQLTPTESSVQKLSVQHGVTTTASVMAQGYHPYLADWSPYHGAAYAVIEATARLVATGANWSKARFSYQEYFQRMDKQAERFGQPVASLLGSIEAQIQLGLPSIGGKDSMSGTFEDLTVPPTLVAFGVTTADSCKVLSPEFKATGEHIYYLPGQILSEDIDFALIKSNFKAFEKWQSDYVITAASAVKYGGVLESLALMSFGNQVGARVELADFKTSLTGQLGGFVFTSQEDIPDAVKIGQTTTDFTLVVNGVNLAGQDLQVAFEGKLEEVYPTEFEQATELQDVPAVTSSAVIKAKETVEVPVVYIPVFPGTNSEYDSAKAFEQAGAKVNLVPFVTLDAESIEKSVDTMVDNIAKANILFFAGGFSAADEPDGSAKFIVTILRNAKVRSAIDRFIEKGDLIIGICNGFQALVKSGLLPYGNFEEAGESSPTLFYNDANQHVAKMVETRIANVNSPWLAGVQVGDIHAIPVSHGEGKFVVTDEEFAILRDNGQIFSQYVDFTGQPSMDSKYNPNGSSHAIEGITSRNGQIIGKMGHSERYEDGLFQNIPGKKDQGLFVSAVRYFTGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP030124_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030124_2

92554-92689

Orphan

Consensus_repeat	Method
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030124_2

>merge|NZ_CP030124|2|92554-92689|CRISPRCasFinder
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAAGACCATCAGAAGATGATAGACTGATTGAGTTGTCTCTTGAGGGACTAGTTAACAGAGGAACGAAAAAAAGTTTCAAAAAAGTGTTGACAA

>NZ_CP030124|2|2|92554-92689|CRISPRCasFinder
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAA	GACCATCAGAAGATGATAGACTGATTGAGTTGTCTCTTGAGGGA
CTAGTTAACAGAGGAACGAAAAAAAGTTTCAAAAAAGTGTTGACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030124.1\|WP_029175302.1\|105244_106027_+\|DUF2971-domain-containing-protein	unknown	unknown	gnl\|CDD\|378585
NZ_CP030124.1\|WP_002936595.1\|107207_107912_+\|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224046
NZ_CP030124.1\|WP_004195554.1\|106763_107207_+\|winged-helix-DNA-binding-protein	unknown	unknown	gnl\|CDD\|197670
NZ_CP030124.1\|WP_002936602.1\|91862_92333_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP030124.1\|WP_009909062.1\|103728_103980_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030124.1\|WP_011921695.1\|100417_100624_-\|DUF3173-domain-containing-protein	unknown	unknown	gnl\|CDD\|371495
NZ_CP030124.1\|WP_001808836.1\|86684_86801_+\|50S-ribosomal-protein-L36	unknown	unknown	gnl\|CDD\|376334
NZ_CP030124.1\|WP_000331493.1\|88584_88971_+\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
NZ_CP030124.1\|WP_012774899.1\|99294_100428_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP030124.1\|WP_011921697.1\|101705_102125_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030124.1\|WP_004195512.1\|87631_88570_+\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
NZ_CP030124.1\|WP_002936627.1\|86441_86660_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP030124.1\|WP_114876472.1\|89175_90432_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP030124.1\|WP_002936630.1\|85678_86320_+\|adenylate-kinase	unknown	unknown	gnl\|CDD\|234711
NZ_CP030124.1\|WP_009909064.1\|104035_104359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030124.1\|WP_038425697.1\|102401_103778_-\|cell-division-protein-FtsK	unknown	unknown	gnl\|CDD\|224588
NZ_CP030124.1\|WP_004195509.1\|87203_87587_+\|30S-ribosomal-protein-S11	unknown	unknown	gnl\|CDD\|180007
NZ_CP030124.1\|WP_002936622.1\|86820_87186_+\|30S-ribosomal-protein-S13	unknown	unknown	gnl\|CDD\|235358
NZ_CP030124.1\|WP_114876473.1\|100684_101701_-\|replication-initiation-factor-domain-containing-protein	unknown	unknown	gnl\|CDD\|367101
NZ_CP030124.1\|WP_114876471.1\|84274_85585_+\|preprotein-translocase-subunit-SecY	unknown	unknown	gnl\|CDD\|236412

Protein	Function_ID	Function_description	E-value
NZ_CP030124.1\|WP_029175302.1\|105244_106027_+\|DUF2971-domain-containing-protein	gnl\|CDD\|378585	pfam11185, DUF2971, Protein of unknown function (DUF2971). This bacterial family of proteins has no known function.	8.93219e-05
NZ_CP030124.1\|WP_002936595.1\|107207_107912_+\|metal-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	3.88616e-106
NZ_CP030124.1\|WP_004195554.1\|106763_107207_+\|winged-helix-DNA-binding-protein	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.12227e-13
NZ_CP030124.1\|WP_002936602.1\|91862_92333_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	0.0029598
NZ_CP030124.1\|WP_011921695.1\|100417_100624_-\|DUF3173-domain-containing-protein	gnl\|CDD\|371495	pfam11372, DUF3173, Domain of unknown function (DUF3173). This family of proteins with unknown function appears to be restricted to Firmicutes. These proteins appear to be distantly related to HHH domains and are therefore likely to be DNA-binding. Genomic environment-visualisation confirms the likely function as being DNA-binding, as this short protein lies very closely between an integrase and a replication protein (http://www.microbesonline.org/).	2.14476e-25
NZ_CP030124.1\|WP_001808836.1\|86684_86801_+\|50S-ribosomal-protein-L36	gnl\|CDD\|376334	pfam00444, Ribosomal_L36, Ribosomal protein L36.	5.19122e-15
NZ_CP030124.1\|WP_000331493.1\|88584_88971_+\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	2.16196e-66
NZ_CP030124.1\|WP_012774899.1\|99294_100428_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.1145e-40
NZ_CP030124.1\|WP_004195512.1\|87631_88570_+\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	1.12143e-178
NZ_CP030124.1\|WP_002936627.1\|86441_86660_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	3.25516e-47
NZ_CP030124.1\|WP_114876472.1\|89175_90432_-\|ISL3-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.18428e-88
NZ_CP030124.1\|WP_002936630.1\|85678_86320_+\|adenylate-kinase	gnl\|CDD\|234711	PRK00279, adk, adenylate kinase; Reviewed.	4.90526e-116
NZ_CP030124.1\|WP_038425697.1\|102401_103778_-\|cell-division-protein-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	8.65814e-15
NZ_CP030124.1\|WP_004195509.1\|87203_87587_+\|30S-ribosomal-protein-S11	gnl\|CDD\|180007	PRK05309, PRK05309, 30S ribosomal protein S11; Validated.	1.51827e-85
NZ_CP030124.1\|WP_002936622.1\|86820_87186_+\|30S-ribosomal-protein-S13	gnl\|CDD\|235358	PRK05179, rpsM, 30S ribosomal protein S13; Validated.	3.4104e-76
NZ_CP030124.1\|WP_114876473.1\|100684_101701_-\|replication-initiation-factor-domain-containing-protein	gnl\|CDD\|367101	pfam02486, Rep_trans, Replication initiation factor. Plasmid replication is initiated by the replication initiation factor (REP). This family represents a probable topoisomerase that makes a sequence-specific single-stranded nick in the plasmid DNA at the origin of replication. Human proteins also belong to this family, including myelin transcription factor 2 and cerebrin-50.	2.33013e-69
NZ_CP030124.1\|WP_114876471.1\|84274_85585_+\|preprotein-translocase-subunit-SecY	gnl\|CDD\|236412	PRK09204, secY, preprotein translocase subunit SecY; Reviewed.	0

>NZ_CP030124.1|WP_002936602.1|91862_92333_+|sigma-70-family-RNA-polymerase-sigma-factor
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEAQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKRKFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR
>NZ_CP030124.1|WP_114876472.1|89175_90432_-|ISL3-family-transposase
MEQLYHTTELIGIKDKNIKILFILKHQTHLEIRAKLDYDSPGCPHCQGKCIKYDFQKSSKIPILDCQGFPTLLLLKKRRFQCKSCQKVTVAETALVKKNCQISLPIWEKVTQLHTENMTNIAIARRLHISVSVVQRKLAQFQFEHDFTKLPKVLSWDEFSRNKGKLAFIAQNFETRSIVTILDNNRQTTIKNYFYKYPRAVRETVEVVTVDMSGSYIPIIKKLFPRAKIVLDRFHIIQYLSRAMMTTRIDIMKTFDTRSLPYRSMKNHWRILQKDSRKLSLNRFFSRTFGQTVTPREVVQKTLNFSEELKFYYELYQILLFHFQEMNSKYFFELLEDKLDLVNPAFKTVFKTFLKYKTYITNAMELPYSNAKLEATNKLIKDIKRQAFGFRNFTNFKTKIYIAFNIKNERTNFVLSRC
>NZ_CP030124.1|WP_000331493.1|88584_88971_+|50S-ribosomal-protein-L17
MAYRKLGRTSSQRKAMLRDLTTDLLINESIVTTEARAKEIRKTVEKMITLGKRGDLHARRQAAAFVRNEIASENYDEATDKYTSTTALQKLFSEIAPRYAERNGGYTRILKTEPRRGDAAPMAIIELV
>NZ_CP030124.1|WP_004195512.1|87631_88570_+|DNA-directed-RNA-polymerase-subunit-alpha
MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLASLPGAAVTSIKIDGVLHEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKKIELDVVGPAEVTAGDILTDSDIEIVNPDHYLFTIADGATFKAVLTVNSGRGYVPAEGNKKDDAPVGTLAVDSIYTPVKKVNYQVEPARVGSNDGFDKLTLEINTNGTIIPEDALGLSARILMEHLGLFTDLTEVAKSAEVMKEAEVASDDRMLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKVKLADLGLGLKKDK
>NZ_CP030124.1|WP_004195509.1|87203_87587_+|30S-ribosomal-protein-S11
MAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTPFAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRRRV
>NZ_CP030124.1|WP_002936622.1|86820_87186_+|30S-ribosomal-protein-S13
MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREVDAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK
>NZ_CP030124.1|WP_001808836.1|86684_86801_+|50S-ribosomal-protein-L36
MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG
>NZ_CP030124.1|WP_002936627.1|86441_86660_+|translation-initiation-factor-IF-1
MAKEDVIEIEGKVVDTMPNAMFTVELENGHQVLATVSGKIRKNYIRILVGDRVTVELSPYDLTRGRITYRFK
>NZ_CP030124.1|WP_002936630.1|85678_86320_+|adenylate-kinase
MNLLIMGLPGAGKGTQAAKIVEKFNVAHISTGDMFRAAMANQTEMGILAKSYIDKGDLVPDEVTNGIVKERLVQDDIKEKGFLLDGYPRTIEQAHALDENLADLGIELQGVINIEIDPSKLVERLSGRIIHKETGETFHKVFNPPVGDYKEEDFYQREDDKPESVKRRLEVNIAQGQPIIDHYRAKGLVHDIEGDQDIDLVFQAIDTVLSKLQ
>NZ_CP030124.1|WP_114876471.1|84274_85585_+|preprotein-translocase-subunit-SecY
MFFKLLKDALKVKLVRSKILFTIFILFVFRVGTHITVPGVNAKSLEALSNVPFLNMLSLFSGNAMRNFSVFALGVSPYITASIIVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFVQSIGITAGFNALSGAKLTNMPLNWQTYLLIGSILTTGSIIVTWLGEQISEKGYGNGTSMIIFAGIISSLPGTFHEIYIDRFVNIESSRLGESAIFVAALVVLIFFVVYFTTFVQQAEYKLPIQYTKRAQGAPSSSYLPLKLNPAGVIPVIFAGSITAVPTSLIQYFASQNKSAGWLLTVQEYFDYSTAKGMIVYAGLIIAFTFFYTFVQVNPEKTAESLQKSAAYIHGVRPGNGTEQFLSKLLTRLAVIGALFLSFVALLPILAQNLFGLSSSIAFLGTSLIIVISTSIEGIKQLEGYLLKRKYVGFLEITE
>NZ_CP030124.1|WP_012774899.1|99294_100428_-|site-specific-integrase
MTVKKAKNGTWTVDISDGFHPVTKKRIRIIRKGFKTKKEALELEQYIRVVELKEKRFDFLVTTDMLFDILEEEDRQNNRKISYISTQRNNYERHIKPYFINTNLNKLSYEHIFEFREYLKIKPKKQNDSSTLSHNTVNKIMILLKKIFDTGVRKSLIDKNPVENIRKLPISKPTINFWNVEEFNEFRKLITSDEISYDLFFTIAFFTGMRLGEIVALTWYDINLITNSIHITKTAYFVNGTNHINSTKTRAGTRRITINHKLARMLADWKEKQKDLLKEFTTDTENLQVIQSTPLPMTKNMIDKKFKQILARNDYLKKIRIHDLRHSHASLLINQGEDYLVVKERLGHASITTTIDTYSHLYPSKQKTLANKLDDIF
>NZ_CP030124.1|WP_011921695.1|100417_100624_-|DUF3173-domain-containing-protein
MIATVNKNDLVALGFSEGTSKRIIRQGKELLIARGFRVYQNKRVGTIPASIATELLGFDVSLGAHHDS
>NZ_CP030124.1|WP_114876473.1|100684_101701_-|replication-initiation-factor-domain-containing-protein
MNTVRIDYFAVTVKNISPESVLTDILLIPLEDFTLNNWGINKYQRHYACSEIKVYFNEDRTSMGVFIELKGQGCRQYEEFLDGNENNWIALIGRLYQYSVNFTRLDIAHDIFDGSLDVQRVYDYCKKGLCISKAKHFEYHEKSVLENGEQVGETVAIGSRGNQQWCIYNKRMEQLSKQELVEYPSWIRAELRCWQDKANIIAEQLFLKRPLSSIYFEAINGHYRFVKPNSTDTNRWRRKKVKWWLDYLKTENQTVLSVERTKPTLRQSEAWTEKQVAKTLAKVYTAKYQAYDVQKAEDYIQGLLKEGLSRLTDNDEKDIEQYIREQNSSPLWGQKKTT
>NZ_CP030124.1|WP_011921697.1|101705_102125_-|hypothetical-protein
MTYNMTDTTLKIGQLDLDMTQFEVPKKIVILSAKVNNRYNEVNGEKIKTEEVTKITCTALDADKVKVLTEMGISTDDLKAINLEIVGNVDKVATLAQNESLLNVPIELVKPKVRLAWNMARSNWAGVKLVCEDIKILGA
>NZ_CP030124.1|WP_038425697.1|102401_103778_-|cell-division-protein-FtsK
MRRIIRRVLRWDKQRLKTVRPNLHIPVIYSSIISKSFYFIFAILILTTILSFRENFLSSIVGIFFISIFWFIFRFWKKCQQAYLNGINYNLQYLLVSNKYYESQVINSREEITNYLVLKYRETEKNIEVHAMKYGDKYNDLASKLGSLLSSALSLELGEMTETIKQVTYIFPKFAEKRLTWEDTLGTANLTISEKVGWQFGSPPHVLLAGSTKSGKTVLLENLVAQYLNIGAEIKLLDPKNGELSWLVGKKLEDRLGYKVVYNSPFQIAGALREAVREMNIRFQVMADNPDTYISKGKVLSWADVEGNYPLVIVLDEGIAFKTEAETTKEGKQAYQEAMSNLGSLLVKSRQASIEVIVGLQRASSDFIPTYMRQNFGVALLLGSTTSDLDSCRMMFSSQDIDYKTCDIGTGYIQIDGVIPQPRYIETPFKSDELDFEEYFDKACDCYWSIRNNDGLSD
>NZ_CP030124.1|WP_009909062.1|103728_103980_-|hypothetical-protein
MKIYKLLFYITYPALVFSIYLLLDMTSEYGTPLIETVFVAGGFLVIPLLLWSLDIISVESVKEESVDNEKNNKASVTMGQTEA
>NZ_CP030124.1|WP_009909064.1|104035_104359_-|hypothetical-protein
MKTFKDIFLSEGMKMPNINGIKRVQSFNSDVSVNFLLDDESRDFLKENLPLTGVVIYEPTLKKLAENIIILNRQKHRMSDESRISLMNKEIYQGYREASFYTSIIEA
>NZ_CP030124.1|WP_029175302.1|105244_106027_+|DUF2971-domain-containing-protein
MKTLYHYTTVETLLLILNYKTLRFKSLLYVDDPLEPSTSDFGNLGGFKYVSCWTDTPNSIPQWTIYSDNMTGVCIGISFDKETDVFLTEKFSLSEYSVPIDMLNALHPLKLGLLVTNNKYVPSLEQIRYTDDVSLITPRVVSSDDKSITINLASSGIYKTTDWSFQNEQRFSFQIFPLPIDLVLELMNANKGDLTEIINSFISVKPKEYFDLDLNLTIFSNMTITFGKRCFAEDKLKVSKFLEDNKFHIPLFDSTVNIKS
>NZ_CP030124.1|WP_004195554.1|106763_107207_+|winged-helix-DNA-binding-protein
MNRIALEIEKYLHEIVLSSENQLEILVGSCQSTVKLTNTQEHILMLIEKAAYTNTEIAKELNVSQAAITKATKSLVAQGLLVAVRDDKDARIVRFSLTEAAKPIAAEHAHHHAHTLEAYEELLEHYSLEEQESIARFLSELVEKIRK
>NZ_CP030124.1|WP_002936595.1|107207_107912_+|metal-ABC-transporter-ATP-binding-protein
MRYITVEDLSFYYDKEPVLEHIHYYLDSGEFVTLTGENGAAKTTLIKATLGILKPKQGKVSIAEKSIKGKKLRMAYLPQQIASFNAGFPSTVYEFVKSGRYPRQGWFRRLTAHDEEHVRISLESVGMWEHRDKRLGALSGGQKQRAVIARMFASDPDIFILDEPTTGMDAGTKDAFYQLMHHSAKKHGKSVLMITHDPDELNKYADRNIHLVRDQQSPWRCFNVHEADEEVAHV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP030124_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030124_3

226660-226769

Orphan

Consensus_repeat	Method
ACTGTTGACCTAACAACCAATCAAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030124_3

>merge|NZ_CP030124|3|226660-226769|CRISPRCasFinder
ACTGTTGACCTAACAACCAATCAAGTGACTCAGGTTGAGATTGAAGCTCCTGTTCAGGGAAACACAAATGAGACCGTTCAGGCAACTGTTGACCTAACAACCAATCAAGT

>NZ_CP030124|3|3|226660-226769|CRISPRCasFinder
ACTGTTGACCTAACAACCAATCAAGT	GACTCAGGTTGAGATTGAAGCTCCTGTTCAGGGAAACACAAATGAGACCGTTCAGGCA
ACTGTTGACCTAACAACCAATCAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030124.1\|WP_002935955.1\|227852_229478_-\|alpha,alpha-phosphotrehalase	unknown	unknown	gnl\|CDD\|274115
NZ_CP030124.1\|WP_002935953.1\|229558_231553_-\|PTS-system-trehalose-specific-EIIBC-component	unknown	unknown	gnl\|CDD\|273916
NZ_CP030124.1\|WP_043033001.1\|220821_223311_-\|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl\|CDD\|273632
NZ_CP030124.1\|WP_002935969.1\|215795_216587_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP030124.1\|WP_002935957.1\|224988_225972_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP030124.1\|WP_024394714.1\|237846_239376_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|223442
NZ_CP030124.1\|WP_002935962.1\|219841_220783_+\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP030124.1\|WP_002935965.1\|218709_218889_+\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|225127
NZ_CP030124.1\|WP_024406824.1\|236190_236844_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|173926
NZ_CP030124.1\|WP_002935948.1\|232556_232868_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030124.1\|WP_002935973.1\|215052_215811_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP030124.1\|WP_014636770.1\|224013_224904_-\|ribonuclease-HIII	unknown	unknown	gnl\|CDD\|234886
NZ_CP030124.1\|WP_002935945.1\|232864_233413_+\|colicin-V-production-protein	unknown	unknown	gnl\|CDD\|224205
NZ_CP030124.1\|WP_002935967.1\|216617_217646_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270279
NZ_CP030124.1\|WP_002935959.1\|223374_224004_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP030124.1\|WP_002935942.1\|233833_236167_+\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NZ_CP030124.1\|WP_012774930.1\|231785_232499_+\|trehalose-operon-repressor	unknown	unknown	gnl\|CDD\|274116
NZ_CP030124.1\|WP_024394715.1\|239415_240354_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|184456
NZ_CP030124.1\|WP_024394713.1\|237215_237530_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP030124.1\|WP_002935966.1\|217739_218549_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238693

Protein	Function_ID	Function_description	E-value
NZ_CP030124.1\|WP_002935955.1\|227852_229478_-\|alpha,alpha-phosphotrehalase	gnl\|CDD\|274115	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.	0
NZ_CP030124.1\|WP_002935953.1\|229558_231553_-\|PTS-system-trehalose-specific-EIIBC-component	gnl\|CDD\|273916	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component. This model represents the fused enzyme II B and C components of the trehalose-specific PTS sugar transporter system. Trehalose is converted to trehalose-6-phosphate in the process of translocation into the cell. These transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci and Streptococci which contain their own A domain as a C-terminal fusion. This family is closely related to the sucrose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively). In E. coli, B. subtilis and P. fluorescens the presence of this gene is associated with the presence of trehalase which degrades T6P to glucose and glucose-6-P. Trehalose may also be transported (in Salmonella) via the mannose PTS or galactose permease systems, or (in Sinorhizobium, Thermococcus and Sulfolobus, for instance) by ABC transporters.	0
NZ_CP030124.1\|WP_043033001.1\|220821_223311_-\|ATP-dependent-RecD-like-DNA-helicase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP030124.1\|WP_002935969.1\|215795_216587_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.55864e-128
NZ_CP030124.1\|WP_002935957.1\|224988_225972_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.03365e-57
NZ_CP030124.1\|WP_024394714.1\|237846_239376_+\|AMP-binding-protein	gnl\|CDD\|223442	COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism].	1.03838e-61
NZ_CP030124.1\|WP_002935962.1\|219841_220783_+\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	4.50967e-133
NZ_CP030124.1\|WP_002935965.1\|218709_218889_+\|cation-translocating-P-type-ATPase	gnl\|CDD\|225127	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism].	1.12154e-15
NZ_CP030124.1\|WP_024406824.1\|236190_236844_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|173926	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.	1.80975e-14
NZ_CP030124.1\|WP_002935973.1\|215052_215811_+\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	3.03791e-53
NZ_CP030124.1\|WP_014636770.1\|224013_224904_-\|ribonuclease-HIII	gnl\|CDD\|234886	PRK00996, PRK00996, ribonuclease HIII; Provisional.	2.94671e-152
NZ_CP030124.1\|WP_002935945.1\|232864_233413_+\|colicin-V-production-protein	gnl\|CDD\|224205	COG1286, CvpA, Uncharacterized membrane protein, required for colicin V production [General function prediction only].	2.35799e-17
NZ_CP030124.1\|WP_002935967.1\|216617_217646_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270279	cd13561, PBP2_SsuA_like_4, Putative substrate binding domain of sulfonate binding protein-like, the type 2 periplasmic binding protein fold. This subfamily includes the periplasmic component of putative ABC-type sulfonate transport system similar to SsuA. These domains are found in eubacterial SsuA proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding the ligand, SsuA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The SsuA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.7942e-91
NZ_CP030124.1\|WP_002935959.1\|223374_224004_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.57008e-39
NZ_CP030124.1\|WP_002935942.1\|233833_236167_+\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_CP030124.1\|WP_012774930.1\|231785_232499_+\|trehalose-operon-repressor	gnl\|CDD\|274116	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B. subtilis-type. This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli. [Regulatory functions, DNA interactions].	1.26063e-96
NZ_CP030124.1\|WP_024394715.1\|239415_240354_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	6.62986e-154
NZ_CP030124.1\|WP_024394713.1\|237215_237530_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	1.34534e-41
NZ_CP030124.1\|WP_002935966.1\|217739_218549_+\|hypothetical-protein	gnl\|CDD\|238693	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.	1.10807e-36

>NZ_CP030124.1|WP_002935957.1|224988_225972_+|Gfo/Idh/MocA-family-oxidoreductase
MEVQMKYKWATLGTGVIANELVQALQDMGGNLYSVANRTYDKGVEFAQKYGIEKVYREIDEVFEDPEVDIIYISTPHNTHINYLRKALKAGKHVLCEKSITLNSEELAEAIQLAEENQVVLAEAMTIFHMPIYRQLSEVIASGKLGDLKMIQMNFGSYKEYDMTNRFFNKNLAGGALLDIGVYALSFVRWFMTEKPNQVLSQVKLAPTGVDEQVGILLSNDAGEMATTALTLHAKQPKRGTIAYDKGYIELYEYPRGQKAVITYTEDGSQEVIEAGETARALSYEVADMEKAVAGIENTMHLAFTQDVMEIMTQLRKEWGLVYPEEM
>NZ_CP030124.1|WP_014636770.1|224013_224904_-|ribonuclease-HIII
MNTVVLKASAQQKQAMMAHYDRYRQTSKNPYIEAFFKLTGASLSIYTSGKVVFQGEMAEQEAGLWGYEPESSGQTTIPGQNLPMIGTDEVGNGSYFGGLAVVASFVRPEDHAFLKSLGVDDSKKMTDQKICQIAPLLKEKIPHQALLLSPKKYNEVIEQGYNAVSVKVALHNQAIFLLLQKGVQPEKIVIDAFTSSQNYQKYLKKEANQFANPVTLEEKAEGKYLAVAVSSIIARAMFLENLVQLGQLVGMNLPSGAGSKSDQVAASILKQYGMAGLNQTAKLHFANTQKAQKLLK
>NZ_CP030124.1|WP_002935959.1|223374_224004_-|signal-peptidase-I
MGAIQKTKRSPLVAFLAEWGIFLLFMAAFFASRYFIWNPVSVDGHSMDPTLQHQEKLIMLKTTSIDRFDIVVASETDSDGKEKLIVKRVIGMPGDTIRYENDVLYVNDQKVDEPYLDEYLAAFQKDKLQEVYSYNKQFQAVAQSAEAFTQDANGYVDFTVTVPEGQYYLMGDDRLVSLDSRSVGTFSRENIKGEVVFRMWPLNRIGTVD
>NZ_CP030124.1|WP_043033001.1|220821_223311_-|ATP-dependent-RecD-like-DNA-helicase
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERSKPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEYGIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEARDLLEATLELLEKSRHTELDPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHTNLTRLMGKNGFKLFPRADVEAAIAELESISSLTYDNIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRMNELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLADLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDEITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQHNLVYTAITRSKSKLILLGEISAFDYAVKNAGTVRKTYLVPRFQGEMAEQESKESLIKKDESKTATTTQTQPPTQPDRKEQVKVVKENNQQLSLLDQDQPKKTSPQPTEYILTVDNLLTIDPMIGIEQADIEEFFKA
>NZ_CP030124.1|WP_002935962.1|219841_220783_+|HAD-IC-family-P-type-ATPase
MFSLSITISVLVIACPCALGLATPTAIMVGTGKGAENGLLFKSGQTIKTLQGVNTIVFDKTGTITEGKPQVTDIHLLSTKNREQVLQLAASSEQYSEHPLAQALLRSAEEESIPLLASQDFQALSGRGLSVTIAEQTIYLGNERLMREQGIDVSKGRAVAETFAHQAKTPVFLASQQEVLAVIAIADKVKETSRQAVQALQTMELEVVMLTGDNEKTAQAIAKEVGIEQVVSQVLPDDKANQVKFLQEQGKTVAMVGDYDHAFGKSYGVLMREWNLLARAVFVLNADNEIVYVEYLDNVNEHPDYKAALEAVK
>NZ_CP030124.1|WP_002935965.1|218709_218889_+|cation-translocating-P-type-ATPase
MKQASYPIQGVTCASCAMTVEKALNKLDGIQNASVNLATEKTNIQYDPAHLSLSDIDSC
>NZ_CP030124.1|WP_002935966.1|217739_218549_+|hypothetical-protein
MIEYYNFNKSELEKHSRIPLIVKKNNEEIFISLALEMVELIKENNEKNEKTVIICPVGPVGQYPHFVRLVNQFKIDLSNVWFINMDEYLLEDLHWIDVVHPLSFRGFMQKNVYSQIHPTLIMSEEQRIFPDPLDIDSISNKIKELGKIDLCIGGIGLNGHIAFNEPDSTLTVQEFLKLGSRVLPISVETKVMNGLTVLKGAVEEVPNYCVTIGMSEIFQAKKIRLAVFRDWHHAVIRKTVCSKPDTGFPSTLMQIHTNCSIYLNESLAN
>NZ_CP030124.1|WP_002935967.1|216617_217646_+|ABC-transporter-substrate-binding-protein
MIKFVKNKYFNWIISLITLIILVACSSNQTLIRDNSANIDKIRIAYMPNFASLHDIITGINSGIFKEEGLEVELIEFADGPTIIASLESGSIDIGNIGPGAHKLAIEGRAEVVAFSQLGNADELIARSDRGIDSIKDLRGKKIGTASGTSAETILKLALLDANLSEKDVEIIDMDASAIVTAMLSGSIDVAATWSPNTTLIKRELKEKVVVLADNSRYRDQSPAIASYVTFPGYSEKNNEKISKFLKGLYRAMDYRAEHMKEVSKWVATQIGSDITAVQDQLQDGEWLTSRQMIQLINTGILQQYYEKQQKNLIVSGIVDISRNINEYVLIDQMSSILKEIK
>NZ_CP030124.1|WP_002935969.1|215795_216587_+|ABC-transporter-ATP-binding-protein
MATEVKKIKVKIEEVSKSFQSIHGEVVALNQINLEIFENEIVTVVGPSGCGKSTLLNLVAGLEPVTSGKIYCDDNEIVGVGVERGVVFQQYALFPWMSVQQNVMFGPEMQGKSKLEASEIANKYIKMVGLQEFSNHYPKELSGGMKQRVAIARAYAVNPTILLMDEPFGALDAQTRIQLQDELIEMLEHERKTCLFITHDIEEAILLGNRVIIMSSRPGEIKEIVNVDLPFPRSQSIKFENDFIDIKNHIWSLVYKDFLNIKK
>NZ_CP030124.1|WP_002935973.1|215052_215811_+|ABC-transporter-permease
MKSNKEQKYFWLTFSLIVALMIWWFLSNYDRTSRSFPNIILVWNALLIMIDKGFIFEDIFSSLTSVFFGFTSGFLLSVPNALFMSWYSPYRNIVYPWIQYIRNIPPLAYVPLVVISAGVGLLPQVIVIAIATFLTMTVTIYQGIINIDPNLIKAARILGASDFEIFKRILVPASIPFIMTAVRLGTSISLTTIIAAESTGATSGMGMRIRSLNNSFDSSGMLLYIILIGVIGLLLNKLVDLIERKLTGWQQK
>NZ_CP030124.1|WP_002935955.1|227852_229478_-|alpha,alpha-phosphotrehalase
MTIDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLKELGIDMIWLNPFYPSPQRDNGYDISDYTAVNPDFGTMADFEDMVAVGKELGIEFMLDMVLNHCSTDHEWFQKALAGDKYYQDFFILRDQPTDWVSKFGGNAWAPFGDTGKYYLHLFDVTQADLNWRNPHVREELFKVVNFWKDKGVKGFRFDVINLIGKDEVLEDCPINDGKPAYTDRPITHDYLKMMNNATFGSEKGFMTVGEMSATTIENCILYTAPEREELSMAFNFHHLKVDYKDGQKWTIMDFDFEELKRLFHTWGEEMSAGNGWNALFYNNHDQPRALNRFVDVENFRNEGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMDDYVDVESINAYQMLLDQGHTPEQAFKIIQAKSRDNSRTPMQWDSSDNAGFSTGAPWLKAGKSYPTINVEQEKTGPIFTFYQELIRLRKELPLISEGDYKAAYNDSQKVYAFERLLNGEKLLVLNNFFAEEVELDLADDYAHGQVLISNYPDNKLGKKIILKPYQALAIQVK
>NZ_CP030124.1|WP_002935953.1|229558_231553_-|PTS-system-trehalose-specific-EIIBC-component
MGKFEKEAKQLLEAIGGKENVNAVTHCATRMRFVLADEKKANVKVIEDIPAVKGTFTNAGQFQVIIGNDIPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNAIQRVMTMLAEIFTPIIPALIVGGLILGFRNVLEGVQMEWLGQAMKDGQLVFDADGNPVWNTIVQVSPFWNGVNHFLWLPGEAIFHFLPVGITWSVSRKMGTSQILGIVLGICLVSPQLLNAYAVPGTDAATIASDWSWNFGAFSIARIGYQAQVIPALLAGLALSYLEIFWRKVVPEVVSMIFVPFLSLLPAIILAHTVLGPIGWTIGQWLSTVVLAGLTGPLKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTGLWPMIALSNIAQGSAVFAYFLMNRHNEKEAQVSLPATISAYLGVTEPALFGVNVKYVYPFVAAMIGSSIAGLLSVTFNIQAASIGIGGLPGILSIKAEYWGAFFMTMIVAIVVPMILTAVFKRTGAFSKKEETVEEVVAPTEAVVETGAAIELISPLTGQTKELSQATDPVFASGVMGQGVLIDPTEGLLVAPVDGEISVLFPTNHAVGITATNGVEFLMHIGMDTVGLEGKGFTAHVKQGDKVKAGDKLISFDIDVIKAAGLVAETPVIVTNQTDFDTQVIGNLPRAISQGEAILTVTKN
>NZ_CP030124.1|WP_012774930.1|231785_232499_+|trehalose-operon-repressor
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLTSYQELTNVLQLSTKTDVVSLDMITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIYEYLENKLGLDIAYAQKEITVEPTNREERELMQSKDDYLVLIKSRVYLGDTQQFQYTESKHKIDKFRFVDFARRKHSL
>NZ_CP030124.1|WP_002935948.1|232556_232868_+|hypothetical-protein
MANLNRYKFTFGEKQLTLTTEHDNLFMEEIERIAQEKYQAIKEKMPTADPETLALLLAINALSVQLTREMAFEQKEQELASVKEKVLKKNVTLIDLDELEDKV
>NZ_CP030124.1|WP_002935945.1|232864_233413_+|colicin-V-production-protein
MISLAIILILAWSFYIGYSRGLVLQAFYSMGSIIALVVATATYKKLASFLYLWVPFANATQGSSNYYFDEKYLFDLDMVFYAGLAFLLIYVLVYAIVRFIGIFVHLLEAFNPDTKTTNLISGALAVLVTFISLQIVMVLLSTIPLAMIQDKLHSSFLANIMIQYTPFTSSFLKSLWLSNIAG
>NZ_CP030124.1|WP_002935942.1|233833_236167_+|endonuclease-MutS2
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVQRIQQAFDELTDIAQIFVENPYFSLSATSDIGPAMRRLELDTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIREAEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEERHELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQLTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEADQDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDTNSLRPTYKFMQGVPGRSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENELNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAYGQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFIDQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK
>NZ_CP030124.1|WP_024406824.1|236190_236844_+|GNAT-family-N-acetyltransferase
MIIRKYQTSDEKGWVYCKALSYLFSPFFDDRETEKPELMTDVYDYRVEWVAEVDGQIVGLIDIDIYTEECSQSYIYAPSKRTAYFTNLAVHPDFQGQGIAQVLFEKAEQELREQGVEKLAIFTREDDAANHLYQKWGGEVVCSDYLVVGAPQDVPTFRFGIDLERGRLSFSDMEGQPVPYYLREGVYVVSEEAGLDLFDIEDVYQELTYVVDLTEKS
>NZ_CP030124.1|WP_024394713.1|237215_237530_+|thioredoxin
MVQVITDANFEVETQEGIVLVDFWAPWCGPCRMQAPILEQLADEVDEDELRIYKMDVDENPNTARQFGIMSIPTLLFKKDGQVVKQVAGVHTKDQIKTILAEIG
>NZ_CP030124.1|WP_024394714.1|237846_239376_+|AMP-binding-protein
MSTISYKPLNLYRQFKTAAQEFPNVAIYFDQPYASFPELGLENTYQTVFEAIQRRAAQFAAADIGYGDKVVLYKSPAFDTYLLAVAVTALGAVPVMISYHLPSSNLDVFAERLEKSFIVYDQETEERVAGMTRTDLVTKVFLPQVLVQEADTFEENLLPEDVIQYMTHTSGTTGVPKLICHTAQTMGWRVAWQQTIFDKMTERGLLAFHISPVHSRYNIGVSSAIGLGFPLYPLSSARKDDVERALALHRPSALETHPNNFVQWARLAKEKPEVFSSIRYYHSTFDAINIGTLRTFLEASKEQHPVFMQVYGQSECGPMILRYHRLENLGTVSGRDMGIGLEGYTEARITDAQGNPLPAGENGHIQFLSKGRAVTYYKEDARFQENVYGAWWDSGDYGCMTPEGTLLLKDRQVDLIEHIDSNLALEDLLLDKLDFLSEVVIIRDVNGAPQPIIALAEDAEMNWEAWWAMVADLPLLKEPILMAYDDIPRTATMKVQRLKMEAEMKEKNL
>NZ_CP030124.1|WP_024394715.1|239415_240354_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKEIYLAGGCFWGMEGYFSQIDGILDTSVGYANGQVETTNYQLLKQTDHAETLYLAYDETRIHLREILLYYFRVIDPFSVNQQGPDKGRQYRTGIYYTDEADLPTIEQVMTEQSQLFGGRPLAVEVEPLAHYIPAEDYHQDYLKKNPQGYCHIDLGQAKIPLIDVADYQKPDQQVLKDSLTDLQYQVTQEAATERPFENEFWNSDQAGIYVDITTGEPLFLSTDKFDSGCGWPSFTKPISKEVATYFQDLSHGMNRIEVRSRAGHAHLGHVFDDGPRDKGGLRYCINSAALRFIPREEMEEAGYGLFLELLK

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Crispr_ID: NZ_CP030124_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030124_4

350280-350415

Orphan

Consensus_repeat	Method
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030124_4

>merge|NZ_CP030124|4|350280-350415|CRISPRCasFinder
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAAGACCATCAGAAGATGATAGACTGATTGAGTTGTCTCTTGAGGGACTAGTTAACAGAGGAACGAAAAAAAGTTTCAAAAAAGTGTTGACAA

>NZ_CP030124|4|4|350280-350415|CRISPRCasFinder
CTAGTTAACAGAGGAACGAAAAAAAGTTTCGAAAAAGTGTTGACAA	GACCATCAGAAGATGATAGACTGATTGAGTTGTCTCTTGAGGGA
CTAGTTAACAGAGGAACGAAAAAAAGTTTCAAAAAAGTGTTGACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030124.1\|WP_029175305.1\|363433_363985_+\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238245
NZ_CP030124.1\|WP_011921913.1\|346211_347816_+\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
NZ_CP030124.1\|WP_024394769.1\|340209_341094_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224136
NZ_CP030124.1\|WP_011921928.1\|364462_364810_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP030124.1\|WP_024394767.1\|336603_337527_+\|lipase	unknown	unknown	gnl\|CDD\|372282
NZ_CP030124.1\|WP_024394818.1\|360136_360655_+\|haloacid-dehalogenase	unknown	unknown	gnl\|CDD\|227040
NZ_CP030124.1\|WP_024394768.1\|337633_338653_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP030124.1\|WP_004195772.1\|360670_361123_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP030124.1\|WP_012774968.1\|364995_365670_+\|hydrolase	unknown	unknown	gnl\|CDD\|234590
NZ_CP030124.1\|WP_043033037.1\|356179_358198_+\|ATP-dependent-DNA-helicase-RecG	unknown	unknown	gnl\|CDD\|236794
NZ_CP030124.1\|WP_114876488.1\|342155_345311_+\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|273578
NZ_CP030124.1\|WP_004195761.1\|348414_349296_+\|fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|180926
NZ_CP030124.1\|WP_014637475.1\|345437_346019_+\|DNA-directed-RNA-polymerase-subunit-delta	unknown	unknown	gnl\|CDD\|275360
NZ_CP030124.1\|WP_004194297.1\|359289_360135_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319819
NZ_CP030124.1\|WP_024394819.1\|358261_359221_-\|asparaginase	unknown	unknown	gnl\|CDD\|199208
NZ_CP030124.1\|WP_014637482.1\|361277_362492_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181738
NZ_CP030124.1\|WP_023369388.1\|362643_363432_+\|GTP-sensing-pleiotropic-transcriptional-regulator-CodY	unknown	unknown	gnl\|CDD\|235230
NZ_CP030124.1\|WP_024394770.1\|341201_342122_+\|zinc-ABC-transporter-solute-binding-protein	unknown	unknown	gnl\|CDD\|238499
NZ_CP030124.1\|WP_001140948.1\|349689_349878_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP030124.1\|WP_024385514.1\|338874_340158_+\|trigger-factor	unknown	unknown	gnl\|CDD\|234956

Protein	Function_ID	Function_description	E-value
NZ_CP030124.1\|WP_029175305.1\|363433_363985_+\|cysteine-hydrolase	gnl\|CDD\|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	5.04414e-43
NZ_CP030124.1\|WP_011921913.1\|346211_347816_+\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP030124.1\|WP_024394769.1\|340209_341094_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|224136	COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane].	1.23959e-18
NZ_CP030124.1\|WP_011921928.1\|364462_364810_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	2.34441e-69
NZ_CP030124.1\|WP_024394767.1\|336603_337527_+\|lipase	gnl\|CDD\|372282	pfam12740, Chlorophyllase2, Chlorophyllase enzyme. This family consists of several chlorophyllase and chlorophyllase-2 (EC:3.1.1.14) enzymes. Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll (Chl) degradation and catalyzes the hydrolysis of an ester bond to yield chlorophyllide and phytol. The family includes both plant and Amphioxus members.	4.87999e-10
NZ_CP030124.1\|WP_024394818.1\|360136_360655_+\|haloacid-dehalogenase	gnl\|CDD\|227040	COG4696, COG4696, Uncharacterized protein conserved in bacteria [Function unknown].	8.63736e-71
NZ_CP030124.1\|WP_024394768.1\|337633_338653_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	8.2571e-29
NZ_CP030124.1\|WP_004195772.1\|360670_361123_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	7.50331e-33
NZ_CP030124.1\|WP_012774968.1\|364995_365670_+\|hydrolase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	0.00135914
NZ_CP030124.1\|WP_043033037.1\|356179_358198_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP030124.1\|WP_114876488.1\|342155_345311_+\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|273578	TIGR01363, pneumococcal_histidine_triad_A_protein, streptococcal histidine triad protein. This model represents the N-terminal half of a family of Streptococcal proteins that contain a signal peptide and then up to five repeats of a region that includes a His-X-X-His-X-His (histidine triad) motif. Three repeats are found in the seed alignment. Additional copies in more poorly conserved regions may be detected. Members of this family from Streptococcus pneumoniae are suggested to cleave human C3, and the member PhpA has been shown in vaccine studies to be a protective antigen in mice. [Cellular processes, Pathogenesis].	3.98271e-133
NZ_CP030124.1\|WP_004195761.1\|348414_349296_+\|fructose-bisphosphate-aldolase	gnl\|CDD\|180926	PRK07315, PRK07315, fructose-bisphosphate aldolase; Provisional.	0
NZ_CP030124.1\|WP_014637475.1\|345437_346019_+\|DNA-directed-RNA-polymerase-subunit-delta	gnl\|CDD\|275360	TIGR04567, DNA-directed_RNA_polymerase_subunit_delta, DNA-directed RNA polymerase delta subunit. Members of this family are the RNA polymerase delta subunit, as found in the Firmicutes and the Mollicutes. All members of the seed alignment have an extended C-terminal low-complexity region, consisting largely of Asp and Glu, that is not included in the model. Proteins giving borderline scores should be checked to confirm a similar acidic C-terminal domain. [Transcription, DNA-dependent RNA polymerase].	1.10968e-29
NZ_CP030124.1\|WP_004194297.1\|359289_360135_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319819	cd07517, HAD_HPP, phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily. Bacteroides thetaiotaomicron VPI-5482 BT4131 is a phosphatase with preference for hexose phosphates. In addition this family includes uncharacterized Bacillus subtilis YkrA, a putative phosphatase and uncharacterized Streptococcus pyogenes MGAS10394 a putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.6586e-70
NZ_CP030124.1\|WP_024394819.1\|358261_359221_-\|asparaginase	gnl\|CDD\|199208	cd08964, L-asparaginase_II, Type II (periplasmic) bacterial L-asparaginase. Asparaginases (amidohydrolases, E.C. 3.5.1.1) are enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases. This model represents type II L-asparaginases, which tend to be highly specific for asparagine and localized to the periplasm. They are potent antileukemic agents and have been used in the treatment of acute lymphoblastic leukemia (ALL), but not without severe side effects. Tumor cells appear to have a heightened dependence on exogenous L-aspartate, and depleting their surroundings of L-aspartate may starve cancerous ALL cells. Type II L-asparaginase acts as a tetramer, which is actually a dimer of two tightly bound dimers. A conserved threonine residue is thought to supply the nucleophile hydroxy-group that attacks the amide bond. Many bacterial L-asparaginases have both L-asparagine and L-glutamine hydrolysis activities, to a different degree, and some of them are annotated as asparaginase/glutaminase.	5.81598e-130
NZ_CP030124.1\|WP_014637482.1\|361277_362492_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0
NZ_CP030124.1\|WP_023369388.1\|362643_363432_+\|GTP-sensing-pleiotropic-transcriptional-regulator-CodY	gnl\|CDD\|235230	PRK04158, PRK04158, GTP-sensing pleiotropic transcriptional regulator CodY.	3.62719e-147
NZ_CP030124.1\|WP_024394770.1\|341201_342122_+\|zinc-ABC-transporter-solute-binding-protein	gnl\|CDD\|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	4.5102e-98
NZ_CP030124.1\|WP_001140948.1\|349689_349878_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	7.26149e-20
NZ_CP030124.1\|WP_024385514.1\|338874_340158_+\|trigger-factor	gnl\|CDD\|234956	PRK01490, tig, trigger factor; Provisional.	1.77361e-155

>NZ_CP030124.1|WP_001140948.1|349689_349878_+|50S-ribosomal-protein-L28
MAKVCYFTGRKTVSGNNRSHAMNQTKRAVKPNLQKVTVLIDGKPKKVWASARALKSGKVERV
>NZ_CP030124.1|WP_004195761.1|348414_349296_+|fructose-bisphosphate-aldolase
MPLVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKQAPVLIQTSMGAAKYMGGYKVARNLIANLIESMNITVPVAIHLDHGHYEDALECIEVGYTSIMFDGSHLPVEENLAKAKEVVELAHAKGISVEAEVGTIGGEEDGIVGTGELAPIEDAVAMVATGIDFLAAGIGNIHGPYPANWEGLDLDHLRKLTEAVPGFPIVLHGGSGIPDAQIQEAIKLGVAKVNVNTECQIAFANATRKFAAAYEANEAEYDKKKLFDPRKFLADGVKAIQASVEERIDVFGSANKA
>NZ_CP030124.1|WP_011921913.1|346211_347816_+|CTP-synthase
MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAARTTDADVIITEVGGTVGDIESLPFLEALRQMKADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEQPAGQGIKNKLAQFCDVAPEAVIESLDVEHLYQIPLNMQAQNMDQIVCDHLKLDVPPADMTEWTAMVNKVLNLQKKVKIALVGKYVELQDAYISVVEALKHSGYANDAAIELDWVNANDLTAENVAERLGQAQGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCVEFARHVLGLEGANSFELDPETKYPIIDIMRDQIGVEDLGGTLRLGLYPSKLKRGSKAAAAYDNQEVVQRRHRHRYEFNNDFREQFEKAGFVFSGVSPDNRLVEIVEIPENKFFVACQYHPELQSRPNRPEGLYTAFVSAAMENEK
>NZ_CP030124.1|WP_014637475.1|345437_346019_+|DNA-directed-RNA-polymerase-subunit-delta
MELNVFAGQEKSELSMIEVARAILEERGRDNEMYFNDLVNEIQNYLEKSNSEIRAALPTFYSDLNVDGSFIPLGENKWGLRSWYAIDEIDEEVITLEEDDEDAPKRKKKRVNAFMDGDEDAIDYGHDDPEDEDNYPGSASSEYDDENPDDEKDEVESYDSEINEIIPDDELDEEDVDLGEDDDEYSDEEVVDE
>NZ_CP030124.1|WP_114876488.1|342155_345311_+|pneumococcal-type-histidine-triad-protein
MKKKAVVGSVAALVLGMSLCSYQLGRFQAMEEQKNRVFYIEDNQSVQTTVAEQLTPDQVSAKENIDAEQIVVKITDQGYVTSHGDHFHYYNGKVPFDAIFSEELVMKDPNYVLQDSHIINEVQDGYVIKVDGKYYLYLKDPSKHKNVRSKEEVERQKGISSADSKNQAAGNSKDGRYRTDDGYVFNPTDVIEDTGDGFIVPHGDHFHFIPKKDLSAAELKAAQDYWNQKGSVSSASGSQYGDRNNRAQQTTISAGQGQDLASLLAQLDATPLSQRHVEADGLVFDPRTITKKTAAGVIVPHGDHYHFIPYSQMSPLEEKISRMIGVNEAGVSSGAQASHSQHTPTQPNRPVTPIGTVTTQPVSPTQPVLPTQPKQSTGKVVSYMGRQIPAYGKGLDGKAYFTSDGYTFSKDSIASVDDQGLIASHGDHFHYVGFGELEDFEIKQVEEWVNEKAGKQVPPKTSEQVGNDAKPTKPSQGNDSKPVKPIQEENRPAFEYKQVTAKRKLAGKVVYEMEVGGKTYTYGRDELDLMKISFAELTLAEKDKQYIFDIAPLAEGDLKPGMLVGMDQIPMKGANATYDTGQSFIIPHIDHIHVLPYTWLSKEQIATIRYIMQHPEIRPSAWTTSGHGDGEATDLVPPILNATPKANRLGLKNWQIIHTAEEVMDARAKGKFATNDGYIFSAEDVLDPASFVFSQAFSLPRATGGSLRSISKKDLSKEELDAVQTLLDKRDAEELAKNVTPIEKRAGLKNWQIVHSAEELAEAKAAGKYTTKDGYIFDPADLLDPKVKIGTDNYRIPRVITDGYRRINKSDLNYLSELIPAEAMVAQREKSNSSSPSTPAPTETGASAGETTTPEQPQVAKETAEEIYNRVEAKKVVPFEALTYNAGYATEVRNGTLVIPHQDHYHYVSFKWFDQGSARSPEGYSLEDFLATVKYYMTNPQERPVSDDGWGVFTPNTPSESTEETEMEESDEEIISEETEEIDEFTEELKRRAEEFGMDFKTFEQSLVTLSDRYKVSFEAFEYDATSKVVRLVDKDGVKRTISLPSLEEQV
>NZ_CP030124.1|WP_024394770.1|341201_342122_+|zinc-ABC-transporter-solute-binding-protein
MLKKVIRGCFVALFGFVLAACSAQKEASQVQPGMKIVTSFYPIYSLVKEVSGNKNDVRMIGSRQGIHSYEPSAADIKAIYDADVFIYHSRILESWAGRLEPNLQGSSVKVLEASTNLPLTKVPGLEDMEAGQGIDEASLYDPHTWLDPVLVGQEAVAIGELLAESDPKNADYYRQNATTLEEKAQKLADKYSPIFLKATSKTFVTQHTAFSYTAQRFGLKQLGIAGVSEEEPSPRQLAEIKEFVDTYNVQTIFTEKGASDKLAKALASSTGVDLKVLDPLEADPENNLTYLENLEQVLETLAQELK
>NZ_CP030124.1|WP_024394769.1|340209_341094_+|glycosyltransferase-family-2-protein
MLQRNFLKNLVRPMQKWENVISVGGVVQVSQGVRITDGEVSHYQLPWLVLPCLQAIEYDCSFLGSRILLDYLQSNLIISGAFGLFYKEYVIAVGGYDRQTLGEDMELVMKLHYFCRNNNIPYRICYETSAICWSQAPSSIGDLCKQRRRWFLGLYQCLKKYRKMLSRVRFGAVGYFSYAYYMLFEFLAPFIETFGCFVILLSLIYHQLNISFFISLFFLYSAFCSLITFASFLQRVYSQDLFIGPMDLCKAFLVTLFRYFFLHWVLNIVRLTSFIGYKKRKREWGEIKRVKQFV
>NZ_CP030124.1|WP_024385514.1|338874_340158_+|trigger-factor
MSVSFEAKETNRGVLTFTIGQDAIKPELDRVFNKVKKDINLPGFRKGHLPRAVFNQKFGEEALYQDVVNALLPAAYEAAVAEAGLEVVAQPKIDVVSMEKGQDWTITAEVVTKPEVKLGDYKNLAVSVEATKEVTDEEVDAKIEAARNNLAELVIKEGPAAEGDTVVIDFVGSIDGVEFDGGKGENFSLGLGSGQFIPGFEAQLVGHAAGEEVNVEVTFPEDYQAADLAGKPALFVTKIHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELEASKEVAFDDAVESAALELAVENAEIVELPEEMIHEEVHRAINEFLGGMQQQGISPDMYFQITGTTREDLHKQYEADAEKRTKTNLVVEAVAKAEGFEATEEEINKEIEDLAATYNMEVAQVRSLLSPEMLKHDIAVKKAVEVITSTATVK
>NZ_CP030124.1|WP_024394768.1|337633_338653_+|alpha/beta-hydrolase
MKKFKKIILWTLGIVASLGIIAYVSVTNHPQLVVGVIQSFMYKESSPNSYSPLYDPIDGLKENGQYLKSEIAYSKDYPNSFLDITYPDQNLEADRPTLFYFHGGGFFGGSKNMGDPLSASQATYLIDDIVSKGYNVVNVDYALVPDHHFPTPVIQMNQAIAYMKEHAEEYHLNMDNVVLMGSSAGAIMAAQYGSVLANQEYAQLLNIEPSIAKEDVKALVIDDAPLDYAKFSLGTKILVGNYVSETIYLSEEEINAYNPISHVNKDYPASFLLGSEYRTDMVSLNKALKQAGVENELVDPLAEEGLEKPHGFVANLRNDPVSAKAFERLITFIDDRTKE
>NZ_CP030124.1|WP_024394767.1|336603_337527_+|lipase
MKKVLIGIGILIACFGIGFLYLASKPSVASNYTEVVETGGAVEKKYLGQGNYDVSYLEINALQNFKKYELYYPTNIETETRKFPVVIFSNGTGVRASKYASVLKHLASWDFIVIGTEEEYSWNGFSSEMSLRLAIKLNDNKTVEGLKSNPFFSKVDLDKIGLSGHSQGGVGVFNAVTEQKHGHMIKTIYAASPANLELSSNLEWDYDPSLISVPTFLVSGTGGGYEDLVVSGKQLTQIYETLPATITKVMARRKEAGHGDMLRLPNGYMVAWFMWQLQGAPEAETAFQGNSPEIVQNKLYQDQRIMN
>NZ_CP030124.1|WP_043033037.1|356179_358198_+|ATP-dependent-DNA-helicase-RecG
MKRLCDELSVLPGIGPKSAEKFLKINIQNINDLLTYYPFRYEDFESKSIYDLQDGEKAVVVGEVVSPANVQYYGYKRNRLRFSMKQGEVVLAVSFFNQPYLADKIVLGQDIAVWGKWDKAKASLTGMKILAQVSDELQPVYHVAQGISQVNLVKAIKTAIDQGYLHLLEENLPSVLRERYRLMNRREAVFAMHFPTNLEEYRQALRRMKFEELFYFQLQLQMLKANNRDISNGLKIAYDADRLAMQIRHLPFVLTDAQSGALAEILSDMKSYGHMNRLLQGDVGSGKTVVAGLAMFAAVTAGMQAAIMVPTEILAEQHFESLRQLFPELSIALLTGGMKAAERRTALEAISSGQVDIIVGTHALIQESVTYHKLGLVVTDEQHRFGVKQRRLFREKGDNPDVLMMTATPIPRTLAITAFGDMDVSIINQLPAGRKPIITRWVKHQQLPTVLDWLESELKVGAQVYFISPLIEESEALDLKNAVDLQSDLQAHFGEQVAVDLLHGKMKNDEKDTIMQAFKERKTNILVSTTVIEVGVNVPNATVMVIMDADRFGLSQLHQLRGRVGRGHKQSYAVLVANPKTESGKERMKIMTETTDGFILAEADLKMRGSGEIFGTRQSGLPEFQVANIIEDYPILEEARRVASQIVSVENWQEDPNWSILLANLKDREELD
>NZ_CP030124.1|WP_024394819.1|358261_359221_-|asparaginase
MKKILVLHTGGTISMQANHQGEVASSKINPMTQIDSPLEEIQVISLDFLNVPSPHIRLEHMMTLYQKIKEEQMNFDGFVITHGTDTLEETAYFLDTMAIPEKPIVLTGAMRSSNELGSDGIYNYRTALRVAADDKSADKGVLVVMNDEIHAAKYVTKTHTTNVSTFQTPTHGPLGLVTKREILYFKTAEPRVRFDLSTVTGTVPIIKAYADMDSILLDSLTASSISGLVIEALGAGNLPPTILPAIKKLLDQKIPIILVSRCFNGIAEPVYAYQGGGIQLEQDGILFVKELNAQKARLKLLIALNAGLEEQSLADYIQG
>NZ_CP030124.1|WP_004194297.1|359289_360135_+|Cof-type-HAD-IIB-family-hydrolase
MTIKAVFFDIDGTLLTDNRMVSSSTILAINALKEKGILVGLATGRDPRFVLQYMASLGLDLAIAYNGQYIFSREEVIYSQSLEPKQIEQIMEYAQTHHKDLSFGTAKGIFGSKIMSAGTGNFAYRVTRMIPESWAGIINFIFNRLVRWISPQQETNLKGFLFQPIYQLMLLTTERETQSLEMLFPNLSFTRSSPYATDIISKGNSKLSGIVKVADRYGFELDEVMVFGDSNNDFEMLNEIQHSVAMGNGTKKVKQAASFVTDTNNRDGIYKALIHFGVIEG
>NZ_CP030124.1|WP_024394818.1|360136_360655_+|haloacid-dehalogenase
MFQSKDDNFNRVKDFHFLMDGETQELPSVYDGQTALHRAGFKLEELVEFLHAASESEVEFHDFIQQLHRDLDTAAAKVSGKRGFGVSMQDQVDALLDILYFTYGSFVLMGVDPEPIFQIVHTANMGKTFPDGKAHFDPITHKILKPDDWEERFAPEEKIQEELKRQMKRLDS
>NZ_CP030124.1|WP_004195772.1|360670_361123_-|universal-stress-protein
MTQSYKTILVAVDGSKGAELALHKAIHVALRNQARLIIAHVIDTRALHNVVAFDASVYESLEREAELLLEEYKQEALNAGLTDVQIRIEFGNPKTLLAIDIPKETGADLMLLGATGLNAFERLLIGSSSEYIMRHATIDLLIVRDGEKSL
>NZ_CP030124.1|WP_014637482.1|361277_362492_+|pyridoxal-phosphate-dependent-aminotransferase
MKQFNKSTKLDDVAYDIRGPVLEEAMRMRANGEQILRLNTGNPAEFGFTAPDEVIRDLIHNARKSEGYSNSKGIFSARKAIMQYCQLKKFPNVDIEDIYLGNGVSELIVMSMQGLLDNGDEVLVPMPDYPLWTAAVSLAGGKAVHYVCDEAAEWYPDLADMESKVTSRTKAIVLINPNNPTGALYPKEILEGIIDIARRHELIIFSDEIYDRMVFDGAVHIPIATLAPDLFVVTMNGLSKSHRICGFRVGWMVLSGPKKHVKGYIEGLNMLSNMRLCSNVLAQQVVQTSLGGYQSVDELLMPGGRLYEQREFITKAINDIPGLSAVKPKAGLYVFPKIDREMYRVEDDEQFVLDFLKQEKVLLVHGRGFNWKDPDHFRIVYLPRVDELAEIQEKMSRFLRQYRR
>NZ_CP030124.1|WP_023369388.1|362643_363432_+|GTP-sensing-pleiotropic-transcriptional-regulator-CodY
MTTLLEKTRNITSILKRSEEQLAEELPYNAIAEHLSAIIDCNSCIINSEGEVLGYHMNYETNNDRVEEFFQNKQFPEGYVKAVAQVYDTQVNLPVESELTAIPVESRSTYPNGLTTIAPIHVTGIRFGSLIIWRNDEQFHDDDLILVEIAATVVGIQLLNFQREEDEKNIRRRAAVNMAVNTLSYSEMKAVAAILGELDGNEGQLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVLIPAIFDEIKKRDY
>NZ_CP030124.1|WP_029175305.1|363433_363985_+|cysteine-hydrolase
MTKALISIDYTIDFVADEGKLTAGKSAQAISERIAQVTQEAFENGDYIFFAIDGHEEGDGFHPEAQLFPSHNIIGTQGRDLYGPLADFYQKHKGHARVRWMDKRHYSAFSGTDLDVRLRERGVDTVVLTGVLSDICVLHTAIDAYNKGYRIEVVSSAIAALTEENHQFALNHLRHVLGATIID
>NZ_CP030124.1|WP_011921928.1|364462_364810_+|50S-ribosomal-protein-L19
MNPLIQSLTEGQLRTDIPSFRPGDTVRVHAKVVEGNRERIQIFEGVVISRKGQGISEMYTVRKISGGVGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLRALQGKAARIKEIRR
>NZ_CP030124.1|WP_012774968.1|364995_365670_+|hydrolase
MSEQFIPSVLSDLRQDIVQMPEVIKECSGIRIYGRRIRSVLFTTDVSIIANHNADAILAVYPFTPSPAIIKSIMLVASVPVLAGVGGGLTTGMRSANMSLLSESEGAYAVVVNGPTDVKTIEAINKVVDIPIIYTVVSEKSDLTSRIKAGVDILNVSCGMETPRVVKKIREAFPDFPIIATGGPTEDSIRRVIEAGANAVSYTAPSNGELFKGKMEKYRKHAKD

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Crispr_ID: NZ_CP030124_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030124_5

781823-781938

Orphan

Consensus_repeat	Method
GTCTGGGAGACTGTTTTATCCCTGAGCTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030124_5

>merge|NZ_CP030124|5|781823-781938|CRISPRCasFinder
GTCTGGGAGACTGTTTTATCCCTGAGCTAGAATAGCGAAGGTTATAATAAGAACAAGTCTGGAAATATTCGGACTTGTTTTTCAATGTCTGGGAGACTGTTTTATCCCCGAGCTAG

>NZ_CP030124|5|5|781823-781938|CRISPRCasFinder
GTCTGGGAGACTGTTTTATCCCTGAGCTAG	AATAGCGAAGGTTATAATAAGAACAAGTCTGGAAATATTCGGACTTGTTTTTCAAT
GTCTGGGAGACTGTTTTATCCCCGAGCTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030124.1\|WP_002935684.1\|791933_793358_+\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP030124.1\|WP_024395075.1\|778554_779682_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP030124.1\|WP_024395073.1\|776986_777622_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP030124.1\|WP_002935691.1\|782992_783997_-\|lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP030124.1\|WP_002935685.1\|790077_791919_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919
NZ_CP030124.1\|WP_024395072.1\|775210_776935_+\|septation-ring-formation-regulator-EzrA	unknown	unknown	gnl\|CDD\|179877
NZ_CP030124.1\|WP_014636072.1\|770476_770758_+\|type-B-50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234969
NZ_CP030124.1\|WP_012027447.1\|771205_772435_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NZ_CP030124.1\|WP_002935700.1\|782069_782711_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_CP030124.1\|WP_015647132.1\|772448_772988_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153229
NZ_CP030124.1\|WP_002935704.1\|780510_781818_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP030124.1\|WP_002935690.1\|784132_785299_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP030124.1\|WP_024395074.1\|777796_778447_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319798
NZ_CP030124.1\|WP_002935688.1\|786521_787238_+\|acetolactate-decarboxylase	unknown	unknown	gnl\|CDD\|226058
NZ_CP030124.1\|WP_002935693.1\|782743_782929_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030124.1\|WP_002935706.1\|779908_780361_-\|DUF1694-domain-containing-protein	unknown	unknown	gnl\|CDD\|377952
NZ_CP030124.1\|WP_002935686.1\|789227_790067_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NZ_CP030124.1\|WP_043033023.1\|785288_786518_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP030124.1\|WP_024395077.1\|787263_788922_-\|fibronectin/fibrinogen-binding-protein	unknown	unknown	gnl\|CDD\|336217
NZ_CP030124.1\|WP_002939427.1\|773169_775122_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542

Protein	Function_ID	Function_description	E-value
NZ_CP030124.1\|WP_002935684.1\|791933_793358_+\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	0
NZ_CP030124.1\|WP_024395075.1\|778554_779682_+\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	3.85999e-150
NZ_CP030124.1\|WP_024395073.1\|776986_777622_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.07791e-99
NZ_CP030124.1\|WP_002935691.1\|782992_783997_-\|lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	1.41544e-152
NZ_CP030124.1\|WP_024395072.1\|775210_776935_+\|septation-ring-formation-regulator-EzrA	gnl\|CDD\|179877	PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional.	0
NZ_CP030124.1\|WP_014636072.1\|770476_770758_+\|type-B-50S-ribosomal-protein-L31	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	1.02305e-47
NZ_CP030124.1\|WP_012027447.1\|771205_772435_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	1.24152e-94
NZ_CP030124.1\|WP_002935700.1\|782069_782711_+\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	1.03377e-35
NZ_CP030124.1\|WP_015647132.1\|772448_772988_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153229	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinson's disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly conserved cysteine located at the nucelophile elbow region typical of these domains. This cysteine been proposed to be a site of regulation of DJ-1 activity by oxidation. DJ-1 is a dimeric enzyme.	6.13385e-63
NZ_CP030124.1\|WP_002935704.1\|780510_781818_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP030124.1\|WP_002935685.1\|790077_791919_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_CP030124.1\|WP_024395074.1\|777796_778447_-\|HAD-family-hydrolase	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.94237e-120
NZ_CP030124.1\|WP_002935688.1\|786521_787238_+\|acetolactate-decarboxylase	gnl\|CDD\|226058	COG3527, AlsD, Alpha-acetolactate decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism].	3.01144e-111
NZ_CP030124.1\|WP_002935690.1\|784132_785299_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	1.75293e-63
NZ_CP030124.1\|WP_002935706.1\|779908_780361_-\|DUF1694-domain-containing-protein	gnl\|CDD\|377952	pfam07997, DUF1694, Protein of unknown function (DUF1694). This family contains many hypothetical proteins.	4.17193e-27
NZ_CP030124.1\|WP_002935686.1\|789227_790067_+\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	5.00398e-63
NZ_CP030124.1\|WP_043033023.1\|785288_786518_+\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.27779e-08
NZ_CP030124.1\|WP_024395077.1\|787263_788922_-\|fibronectin/fibrinogen-binding-protein	gnl\|CDD\|336217	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA). This family consists of the N-terminal region of the prokaryotic fibronectin-binding protein. Fibronectin binding is considered to be an important virulence factor in streptococcal infections. Fibronectin is a dimeric glycoprotein that is present in a soluble form in plasma and extracellular fluids; it is also present in a fibrillar form on cell surfaces. Both the soluble and cellular forms of fibronectin may be incorporated into the extracellular tissue matrix. While fibronectin has critical roles in eukaryotic cellular processes, such as adhesion, migration and differentiation, it is also a substrate for the attachment of bacteria. The binding of pathogenic Streptococcus pyogenes and Staphylococcus aureus to epithelial cells via fibronectin facilitates their internalisation and systemic spread within the host.	0
NZ_CP030124.1\|WP_002939427.1\|773169_775122_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0

>NZ_CP030124.1|WP_002935704.1|780510_781818_+|phosphopyruvate-hydratase
MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNVIADAIIGFDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEVPLYTYLGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPSFKEGLRWGAEVFHALKKILKARGLVTAVGDEGGFAPKFEGTEDGVETIIEAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKRVQLVGDDFFVTNTDYLARGIKEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAVYKGLNSFYNLKK
>NZ_CP030124.1|WP_002935706.1|779908_780361_-|DUF1694-domain-containing-protein
MNDLNTTILQKASGETRLNPDEQRLYMGTYRERVVLIVSFDDLSSEVVGNKFDTICQKLANSYSPLFLKLSPALSDKQQISLLKIAQTFGITTAIIDEKIGQSPYALVFHTNHAVDNEEVSLESIFPNIISKPEEKKEDAKPSFWKKLFG
>NZ_CP030124.1|WP_024395075.1|778554_779682_+|glycerate-kinase
MHILIAPDSFKESLSATKVAEAIKKGFSKAYPQAGYDLIPLGDGGEGTVESLMQALSLDGTQTWVTGPFGDKIKVSYAVKDDLAVFEMAEIVGLASILHGKRSPLFIKTQGVGELIVELVQNGVKRIFIGVGGSASHDGGIGMAAGLGVKFYNREGKEVEAIGAHIGEIVSFSTEDMLVDLSQVRIDLVTDVENPLCGPAGITFVFAGQKGLASAEFELVDKKMESFYKLVNPMLLDLAGAGAGGGMAAGLVQFAGARIQKGIDFVLDQLDFDHRVTKADLVVVGEGRMDAQSLSGKTPIGVARRTPTGIPIIAICGSLKDDLPEFPFENICAAFPIIASVESLEDTLQKAEKNLVRTAEQVARILQLGGQQRWN
>NZ_CP030124.1|WP_024395074.1|777796_778447_-|HAD-family-hydrolase
MYQTILFDLDGTLTDSGQGILNSVAYALEKMGIEEPDTANLNRFIGPPLYESFSRFYQLNPEDTQSAVDAFRVYFKEKGMFENQLYPGIIPLLEELRTAGKTLVIATSKPEIFAKQILEHFGIAHYFDVIAGASLDSSRISKADVIGYAINQLEAFPKHAVMIGDREHDIEGARMHQLPAIGVLYGYGSKQEFEKAGATMIVETVQDLKRVLLTTE
>NZ_CP030124.1|WP_024395073.1|776986_777622_+|phosphoserine-phosphatase-SerB
MTTGLLVMDVDSTLILEEGIDLLGEEAGLGEQVAAITERAMLGELDFEEALRERVALLKGLPVSVFDRIIKKIHFTPGAAELVSELKMRGYKVAVVSGGFHETVDRLAAQLELDYVRANRLEVVDGVLTGQVLGEIVTKDTKKACLEEWATENGLSLSQTIAMGDGANDLPMIQRAGIGVAFCAKPIVQEQAPYQINEKNLYKLIEILDSK
>NZ_CP030124.1|WP_024395072.1|775210_776935_+|septation-ring-formation-regulator-EzrA
MPTGTIILIVSIVIILIIAYIACLIVRKRNDNLLVALEERKEELFNLPVNEEVEAVKALHLIGQSQVSFREWNQKWVDLSLNSFADIENHIFEAEGYNNAFRFVSAKNAIDSIESQIDLIEEDIASIRHGLMELKEQEEKNSGRVKHALNLFDSLQEAVRENPDSYGETLPELEKQLKNIEVEFSEFVMLNSSGDPIEASEILDKTEEHMIALNQIMDRIPSLIERVTKDFPEQLEDLESGYRKLVEQNYLFTEANIESQFQNIRVSIRENTALIVSFDLDAAEAENEGIQAKIDHLYKVFNREIEANKEAVKISKNLPKFLEHVVQNTQLLDEESQRLNATYLLADSKLSRINQLKARLESIEIVVTESVEDIENPQVAYSILEERLDHSLASLKEIEEEQLVLADYLKSQELSENTARKKATLYINKLHTLKRYMEKRNLPGIPAEFLTNFFRTSDHVEALIAELDYKRINIEVVNRLLENATYDMNQLEELAYLIVQNATLTEQLLQYSNRYRSFDESVQKAFNRSLSIFEKDFDYQAAFEEISFALETVEPGVTERFVRSYEKTREAIRY
>NZ_CP030124.1|WP_002939427.1|773169_775122_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MTEEIKDLQEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFADKIEVYIEPDNSITVIDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVHVYKNGQVYFQEYKRGEVVADLEVVGETDRSGTTVHFTPDPEIFTETTEFDFAKLNKRIQELAFLNRGLNLSITDKREGVEQTKEYHYEGGIASYVEYLNENKDVIFETPIYTEGEMDDITVEVAMQYTTSYHENVVSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKILKENEDNLTGEDVREGLTAVISVKHPGPQFEGQTKTKLGNSEVVKITNRLFSDAFAEFLLENPQIARRIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDATKTELFIVEGDSAGGSAKSGRDREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSEIKEYIQPGVNQEQELQDALERHSTGRSKPTIQRYKGLGEMDDHQLWETTMNPENRLMARVSVDDAAEADKIFDMLMGDKVEPRREFIEENAVYSTLDV
>NZ_CP030124.1|WP_015647132.1|772448_772988_+|DJ-1/PfpI-family-protein
MTRVAVVLADGFEEIEALAPVDVFRRAHFDCQIVGLDSHEVEGSHGIRVQTDQVFDGDLSSFDLIVLPGGMPGSVHLRDSESLITELQRAVASGKSVAAICAAPIVLDKAGLLDSRHYTCFPGKEKDIPSGIHLEEDVVVDGPIITSRGAGTSLDFAYKLVDLFGGDGESLAQTMVYHS
>NZ_CP030124.1|WP_012027447.1|771205_772435_+|FtsW/RodA/SpoVE-family-cell-cycle-protein
MRKLMKNRGTIDSRVDYSLILPVFFLLVVGIISLYIAVSQDYPDNVVQMVGQQIAWIGIGTVAAFLVMFFSTKFLWQITPYLYVLGLGLMVLPLFFYSPDLVASTGAKNWVTIGGMTLFQPSEFMKIAYIIMLSRVIVTFHKYYPNRKIREDFMLIGYMTLFTIPVLILLALQKDLGTSLVFVAIFSGMLLLSGVSWKILLPTALTGIVLVGGFMLIFISPGGTTFLHNLGMDTYKINRIAAWLDPFKNAQSTTYQQAQSLIAIGSGGLKGLGFNKTNLLIPVRESDMIFTVIGEDFGFIGGTVLIGLYLLLIYRMLRVTLKSNNRYYTYISTGYIMMLLFHVFENVGAATGLLPLTGIPLPFISQGGSSMVSNLIGVGLVLSMGYQSRLADEKETNRSRRYRKITIKR
>NZ_CP030124.1|WP_014636072.1|770476_770758_+|type-B-50S-ribosomal-protein-L31
MARKESMAERNFKMKKDIHPEYRTVVFMDTTTGYKFLSGSTKKSNETVEFEGETYPLIRVEISSDSHPFYTGRQKFTQADGRVDRFNKKYGLK
>NZ_CP030124.1|WP_002935700.1|782069_782711_+|HAD-family-hydrolase
MIEWIFFDLGSTLLDEEAAYGYYIDKCVKKLESLDIEVSSDSYKKKMVEYAHKSLDPIRATWHYFAPTEPRPLWTNEGVSLYPETIDALEKLSQNYRLGIIANQSSSIRELLKEWGIESYFQLIILSEEVGLSKPNTAIFTLALQKTNIPADRVVYVGDRYDNDILPAKSLGMWTVRILTGFGKHASENEKLKSDWVIPSLQEITNIFEQTKN
>NZ_CP030124.1|WP_002935693.1|782743_782929_-|hypothetical-protein
MNPVDLFNQVKELIANKDFDGAKQFIEENKDQFGEYLEQAKGLLSGSEGVNGLLDKVKGLF
>NZ_CP030124.1|WP_002935691.1|782992_783997_-|lactonase-family-protein
MAIYFGTYTKRESKGIYKANFDSETGQLSNLELVTEEPNPTYLAFDKAGHLYSVGAENGLGGIAAFNAEYTLLNHVVSEGAPLCYVAVDEARDLVYGSNFHKGQLLVYKRLADGSLELADVAQHEGSGPHENQASAHIHFSDLTPDKFLVTCDLGCDQVVTYKVSDQGKVEKIATYQAAPGSGPRHIVFHPVAKIAYLICELNSTIEVLIYDGWGQFEHLQTVSTLPEDHTGFNGTAAIRITKDGKFIYGSNRGNDSIAVYKTLADASLELVEIVPTNGKTPRDFTLSPDEKHLIVVHQDSDNATVFERDAENGCLTELSHDFYVPEAVCVTFL
>NZ_CP030124.1|WP_002935690.1|784132_785299_+|AI-2E-family-transporter
MEDKHQKFSLTWFFRLFLNSQAVTFLLVTLLTFLTIFIFSKISFLFRPIGSFLEIVLLPMILTGLLYYLLNPMVDWMEKHKISRTVGISILFVLISLLIIWGLAVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIVAYAQKFSSSAVNWASNLISTASQIIVAILIMPFILFYLLRDGQYLNKHITQYLPTKWREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIPYLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFVLLTAGQMYGVLGVLLGIPIYASIKVLVKAAFEWYKAHSSLYEDEENEVVNEQ
>NZ_CP030124.1|WP_043033023.1|785288_786518_+|hypothetical-protein
MNNSEKMLVCLDQQDLDKADKYFKRALVQDDSETLLSLAAYLEGIGFFPQARQIYEQVKEEFPEVLINLAQIAFEDGLVEEAFRYLEEISEDSSIYVEALLVKADLYQAEGLSDVAREKLLEASYLSDEPIILFGLAELDMELELFNEAISYYAQLDNREIYELMGVSTYQRIGIAYASLGKFEAAIEFLEKAVELEYDDQTVFELAALLFEREEYQKANLYFKQLDTINPDFEGYEYAYAQSLHAEHKIDDALVMTQKGLAKNDFDANLLLQASQYAYELHDEAGAEDYLLRAKEVADDSNELALRLSNLYLEQERFEEVVALFDEEVDNVLARWNKAKAYQALERDDEAIALYDELAGELAENPEFLADYVAVLRQLGRLDEAKEQASRYIQLVPDDLAMQEFLNEE
>NZ_CP030124.1|WP_002935688.1|786521_787238_+|acetolactate-decarboxylase
MQVNRLFQYNTLGALMAGLYGGSLTVGELLEHGDLGLGTLDSIDGELIVLDGKAYQAKGAGEKPEVVEVPADMKVPYAAVIFHEAEVIFKQRFEMTSDELHQRIESYYDGENLFRSIKIKGTFSHMHVRMIPKSAFDVRFAEVASRQPEYTAENISGTIVGIWTPEIFHGVSVAGYHLHFISDDLTFGGHVMDYVISEGMVEVGPVDQLDQRFPVQDRQYLFAKFNAKEVREDIDKAE
>NZ_CP030124.1|WP_024395077.1|787263_788922_-|fibronectin/fibrinogen-binding-protein
MSFDGFFLHHMTAELKANLEGGRIQKINRPFEQEIILNIRSNRQSHKLLLSPHSVFGRVQLTQSDFTNPKVPNTFTMILRKYLQGAIIEEIRQLDNDRILEFSVSNKDEIGDHTQATLIVEIMGKHSNIILVDKSEQKIIEAIKHVGFSQNSYRTILPGSTYIRPPETHSLNPYTVSDEKLFEILSTQELSPKNLQQVFQGLGRDTASELASHLQTDRLKNFRAFFDQATQPSLTAKSYAALPFANSPENQPHFESLSSLLDFYYQDKAERDRVAQQANELIKRVASELEKNRKKLVKQEQELADTETAELVRQKGELLTTYLHQVPNDQASVTLDNYYTGQELEIELDVALTPSQNAQRYFKKYQKLKEAVKHLTNLIEETKATIVYLESVDTMLGQASLAEIDEIREELIETGYLKRRHREKIHKRQKPERYLATDGKTIILVGKNNLQNDELTFKMAKKGELWFHTKDIPGSHVVITDNLDPSDEVKTDAAELAAYFSKARHSNLVQVDMIEAKKLHKPTGGKPGFVTYRGQKTLRVTPTEDKIKSMKI
>NZ_CP030124.1|WP_002935686.1|789227_790067_+|PRD-domain-containing-protein
MIIKRVLNHNAIIAQSNKNVDILLFGKGIAFGKKVGDAIPPSSIEKSFLLKNSDNMNRFTELFIDVPIELVYVCEKIINLGKITLGNHFDEIIYINLTDHINSSIERHKEGVVVTNPLRWEIAKYYKEEFELGKKALSIIKKDLHVELPVDEAAFIALHFVNANLENIFQESYRITGIIMKIEQIIQDYYSTEFNQDSIDYYRFITHVKLFAHRLVEGNEYNDEDDVDLLELMKKKYPREYQCGTRVADFIRLEYDYLLSPSELVYLIAHIRRLTKNLS
>NZ_CP030124.1|WP_002935685.1|790077_791919_+|PTS-transporter-subunit-EIIC
MKYKNTALAILEAVGGEKNVLRATHCVTRLRLELKDENIVSDERVKSISGVLGIMKKNGQYQIILGNDVANYYKEFTALGKFDSDSVQQVKKANVLEQVIEYIAGSMTPLIPAMLGGGMIKVLVIVLPMLGLLKADSQSISFLAFFGDAPYHFMPIFLAYSASQKLKVTPALAMSVAGILLHPNFVQMVSSGDPLHFLGAPVTPASYGSSVIPILIMVWLMKYIEAVFNKVTPAITKSFLQPTLVLLVSGFIALVLVGPLGVIVGEGLSQLVEQMHGVAGWLTLAVLGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVAFKSKNSNTKQIAFAAGFSALFAGVTEPALYGVTLKYKKPLYAAMIGGGLAGLFVGLTGVKAYLFAVPSLIALPQFIYSEAASNITNAMIAAAISIIVTFILAYFLGIDEETSTVNLEKVAPGISSRKNVFSPLSGQILPLEKVNDATFSKKMLGEGVAIIPKDGKVYAPFDGAITSLFPTKHAIGLTSDEGVELLIHFGLETVELKGRGFVSHVSDGEKVEKGQLMLEVDVEMLVAEGYDIVTPVVVTNTQEYLDVLLLSTKEEVNYADDLLAVL
>NZ_CP030124.1|WP_002935684.1|791933_793358_+|glycoside-hydrolase-family-1-protein
MSIFPDNFLWGGAVAANQVEGAYNEGGKGLSVQDVLPNGGLGEATQEPTEDNLKLQAIDFYHRYKEDIALFSELGFKVFRTSIAWSRIFPNGDEEFPNEEGLQFYDELFDELLKNGIEPLVTLSHYETPLYLARKYHGWVDRKMIQFFEKFARTVFERYKDKVKYWLTFNEVNSVLELPFTSGGIDLPNEELSKQDLYQAIHHELVASSLVTKIAHEIIPDCKVGCMVLAMPTYPMTPNPEDVWAAHAYENLNYLFSDIHVRGYYPNYAKRYFKENGIKITFMEGDEELLKNNTVDFLSFSYYMSITQAADPSKYSSGRGNILGGLVNPYLEASDWGWQIDPIGLRLTLNRYYDRYQIPLFIVENGLGAKDQLVKDEAGGLTVHDDYRIQYMQEHLLQVAEAIQDGVEVMGYTSWGCIDCVSMSTAQLSKRYGLIYVDRNDDGSGSLTRYRKKSFYWYKEVIQSNGSILGNSSK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

31794 : 41854

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044675272.1\|31794_35514_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	4.3e-38	27.2
WP_024394843.1\|35516_36971_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.6e-57	35.2
WP_024394844.1\|37026_38049_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FGG1	Synechococcus_phage	3.8e-61	42.0
WP_024386485.1\|38045_38597_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.5e-27	39.1
WP_024394845.1\|38606_40154_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.5e-73	47.0
WP_002935322.1\|40218_41049_+	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	7.7e-89	59.3
WP_032499218.1\|41038_41854_+	site-specific DNA-methyltransferase	A0A1W6JJW1	Lactococcus_phage	1.1e-26	33.5

DBSCAN-SWA_2

1034642 : 1108755

Streptococcus_phage(52.94%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011528024.1\|1034642_1034816_-	conjugal transfer protein	D0R0F6	Streptococcus_phage	1.7e-27	98.2
WP_000691759.1\|1034867_1036787_-	tetracycline resistance ribosomal protection protein Tet(O)	A0A1B0RXH7	Streptococcus_phage	0.0e+00	99.7
WP_001140406.1\|1037153_1037528_-	TnpV protein	A0A1B0RXG6	Streptococcus_phage	2.0e-68	100.0
WP_114876516.1\|1037631_1039008_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	1.1e-265	96.3
WP_073459356.1\|1039131_1039416_-	topoisomerase	A0A1X9I6W8	Streptococcus_phage	2.3e-40	93.0
WP_002321849.1\|1039561_1040299_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	3.7e-135	100.0
WP_020220349.1\|1040345_1040579_-	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	1.0e-22	84.6
WP_114876517.1\|1040657_1046561_-	DEAD/DEAH box helicase family protein	I3PUW5	Vibrio_phage	1.9e-189	31.8
WP_114876518.1\|1046609_1047161_-	hypothetical protein	NA	NA	NA	NA
WP_001068448.1\|1047144_1047336_-	calcium-binding protein	NA	NA	NA	NA
WP_114876519.1\|1047336_1052232_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_162797727.1\|1052685_1052859_-	hypothetical protein	NA	NA	NA	NA
WP_114876520.1\|1052865_1053708_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_114876521.1\|1053704_1054298_-	transcriptional regulator	NA	NA	NA	NA
WP_024405106.1\|1054689_1056603_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.4e-29	27.1
WP_114876522.1\|1057311_1060005_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_162797732.1\|1060006_1062358_-	AAA family ATPase	NA	NA	NA	NA
WP_014636633.1\|1062314_1062668_-	PrgI family protein	NA	NA	NA	NA
WP_017370826.1\|1062729_1063578_-	conjugal transfer protein TrbL	NA	NA	NA	NA
WP_001072171.1\|1063602_1063845_-	hypothetical protein	NA	NA	NA	NA
WP_114876523.1\|1063862_1065680_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_044680748.1\|1065679_1066168_-	hypothetical protein	NA	NA	NA	NA
WP_114876524.1\|1066244_1066829_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014636637.1\|1066831_1067065_-	hypothetical protein	NA	NA	NA	NA
WP_029176283.1\|1067073_1067457_-	arsenate reductase	NA	NA	NA	NA
WP_044667138.1\|1067467_1067896_-	hypothetical protein	NA	NA	NA	NA
WP_114876525.1\|1067879_1069235_-	DNA (cytosine-5-)-methyltransferase	A0A141E1L1	Streptococcus_phage	3.4e-126	55.6
WP_114876526.1\|1069383_1070202_-	replication initiator protein A	A0A286QNA4	Streptococcus_phage	2.2e-11	36.6
WP_024381332.1\|1070508_1070664_-	DNA mismatch repair protein MutT	NA	NA	NA	NA
WP_014637015.1\|1070656_1071160_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_114876527.1\|1071233_1076969_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_024394617.1\|1077202_1079188_-	excinuclease ABC subunit B	NA	NA	NA	NA
WP_024394618.1\|1079385_1081584_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_002940438.1\|1081583_1082324_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.5e-32	40.1
WP_002935171.1\|1082379_1082871_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002935173.1\|1083170_1084703_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2H4UUX5	Bodo_saltans_virus	8.8e-30	23.2
WP_114876528.1\|1086830_1087678_-\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	2.0e-07	26.6
WP_029694380.1\|1087726_1088317_+	recombinase family protein	M9Q1K0	Clostridium_phage	8.6e-10	28.0
WP_002935179.1\|1088501_1089311_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_002935182.1\|1091098_1091284_+	hypothetical protein	NA	NA	NA	NA
WP_002935183.1\|1091264_1091615_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_002935185.1\|1091825_1092578_+\|transposase	transposase	NA	NA	NA	NA
WP_094122545.1\|1094255_1095102_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	1.1e-08	25.4
WP_002935191.1\|1095674_1097441_-	L-fucose isomerase	NA	NA	NA	NA
WP_002935195.1\|1098448_1100740_-	glycoside hydrolase family 95 protein	NA	NA	NA	NA
WP_014637022.1\|1100797_1101598_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_002935201.1\|1101594_1102368_-	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_002935202.1\|1102390_1102861_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_014637023.1\|1102851_1103283_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_002935205.1\|1103275_1103716_-	fucose isomerase	NA	NA	NA	NA
WP_024405815.1\|1103727_1104366_-	L-fuculose-phosphate aldolase	NA	NA	NA	NA
WP_002935207.1\|1104476_1105880_-	rhamnulokinase	NA	NA	NA	NA
WP_002935208.1\|1106056_1106821_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_002935210.1\|1107801_1108755_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.1e-38	33.2

DBSCAN-SWA_3

1312428 : 1321892

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114876536.1\|1312428_1315236_-	N-acetylmuramoyl-L-alanine amidase	M4ZRP4	Bacillus_phage	4.0e-20	33.5
WP_024394536.1\|1315273_1316317_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_024382254.1\|1316333_1317185_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.1e-25	34.0
WP_002937117.1\|1317239_1318286_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.3e-69	44.5
WP_002937118.1\|1318474_1318960_-	hypothetical protein	NA	NA	NA	NA
WP_024394533.1\|1318959_1319553_-	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.9e-10	33.1
WP_024394532.1\|1319552_1320422_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	3.9e-99	62.2
WP_087013902.1\|1320540_1321892_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	9.7e-65	51.8

DBSCAN-SWA_4

1383286 : 1475245

100

Streptococcus_phage(75.93%)

tail,protease,portal,capsid,terminase,holin,tRNA,integrase

attL 1390777:1390794|attR 1484075:1484092

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024394419.1\|1383286_1385239_-\|tRNA	threonine--tRNA ligase	A0A1V0SKZ9	Klosneuvirus	2.3e-67	34.6
WP_002935823.1\|1385388_1385574_-	hypothetical protein	NA	NA	NA	NA
WP_024394420.1\|1386046_1386421_-	hypothetical protein	NA	NA	NA	NA
WP_114876540.1\|1386435_1387749_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_024378360.1\|1387749_1388748_-	glycosyltransferase	NA	NA	NA	NA
WP_114876541.1\|1389056_1390436_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
1390777:1390794	attL	NA	NA	NA	NA
WP_002935813.1\|1390868_1391873_-	catabolite control protein A	NA	NA	NA	NA
WP_024376342.1\|1392081_1393167_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_002935810.1\|1393487_1394630_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.5e-84	42.3
WP_024394424.1\|1395233_1396076_+	DUF975 family protein	NA	NA	NA	NA
WP_024394425.1\|1396637_1397075_-	CoA-binding protein	NA	NA	NA	NA
WP_024394426.1\|1397310_1398093_-	hypothetical protein	NA	NA	NA	NA
WP_024394427.1\|1398079_1400716_-	DNA polymerase I	A0A218MKQ4	uncultured_virus	1.2e-55	31.0
WP_161606666.1\|1402267_1405645_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_015646609.1\|1405644_1406346_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-38	39.8
WP_024382198.1\|1406434_1406770_-	hypothetical protein	NA	NA	NA	NA
WP_024382197.1\|1406864_1407350_-	thiol peroxidase	NA	NA	NA	NA
WP_029175272.1\|1407428_1409879_-	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.2e-97	35.0
WP_012028341.1\|1409999_1411823_-	C69 family dipeptidase	NA	NA	NA	NA
WP_043032987.1\|1412016_1412877_-	SAM-dependent methyltransferase TehB	NA	NA	NA	NA
WP_024394432.1\|1413045_1414089_+	Zn-dependent alcohol dehydrogenase	K7Z7U2	Megavirus	3.9e-05	21.4
WP_002935771.1\|1414174_1414642_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.7e-43	55.7
WP_024394433.1\|1414644_1417014_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.7e-93	40.4
WP_002935768.1\|1417454_1417688_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_012775228.1\|1417734_1417884_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_024394434.1\|1417883_1419089_-	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_029175138.1\|1419075_1419678_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_024394436.1\|1419670_1420498_-	DNA-formamidopyrimidine glycosylase	G3MA33	Bacillus_virus	2.4e-29	35.1
WP_002935752.1\|1421110_1422010_-	GTPase Era	NA	NA	NA	NA
WP_024394437.1\|1422026_1422428_-	diacylglycerol kinase family protein	NA	NA	NA	NA
WP_024394438.1\|1422408_1422906_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_024394439.1\|1423005_1423818_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_024394440.1\|1423921_1425430_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_024394441.1\|1425457_1426159_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_012027344.1\|1426469_1427963_-	cholesterol-dependent cytolysin suilysin	NA	NA	NA	NA
WP_024394442.1\|1428552_1429263_-	HAD family hydrolase	NA	NA	NA	NA
WP_029174819.1\|1429316_1431056_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.1e-44	28.0
WP_024394444.1\|1431055_1432783_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-39	25.9
WP_044675329.1\|1433787_1434012_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114876542.1\|1434153_1435509_-\|holin	holin	M1Q1X7	Streptococcus_phage	1.1e-180	88.9
WP_114876543.1\|1435596_1435839_-\|holin	phage holin	M1PSK5	Streptococcus_phage	1.1e-38	97.5
WP_079397732.1\|1435844_1436063_-	hypothetical protein	M1NSI3	Streptococcus_phage	7.3e-31	98.6
WP_153308505.1\|1436126_1436282_-	hypothetical protein	NA	NA	NA	NA
WP_024402957.1\|1436304_1436739_-	DUF1366 domain-containing protein	A0A2P0VI59	Streptococcus_phage	1.0e-20	38.6
WP_087013714.1\|1436751_1438809_-	hypothetical protein	M1IR90	Streptococcus_phage	2.1e-273	69.3
WP_044675326.1\|1440014_1440194_-	hypothetical protein	NA	NA	NA	NA
WP_087013711.1\|1440205_1441324_-	hypothetical protein	O80182	Streptococcus_virus	7.9e-121	60.9
WP_052502173.1\|1441341_1443078_-	hypothetical protein	M1IFB6	Streptococcus_phage	1.2e-168	59.2
WP_044675325.1\|1443077_1444553_-\|tail	tail protein	A0A1P8VVL3	Streptococcus_phage	2.4e-149	52.0
WP_044675324.1\|1444549_1448422_-\|tail	phage tail tape measure protein	M1PKM6	Streptococcus_phage	1.8e-217	48.4
WP_153594622.1\|1448431_1448578_-	hypothetical protein	NA	NA	NA	NA
WP_044675323.1\|1448592_1448937_-	hypothetical protein	NA	NA	NA	NA
WP_044675322.1\|1448989_1449559_-	hypothetical protein	A3F651	Streptococcus_phage	3.7e-34	44.3
WP_044675321.1\|1449574_1449955_-	hypothetical protein	A0A1S5SFG1	Streptococcus_phage	1.2e-20	37.4
WP_044670322.1\|1449951_1450377_-	hypothetical protein	A0A2P0ZLD7	Lactobacillus_phage	5.3e-17	38.3
WP_079267401.1\|1450378_1450612_-	hypothetical protein	A0A1S5SFE6	Streptococcus_phage	5.8e-10	44.4
WP_044675320.1\|1450775_1451081_-	hypothetical protein	A3F647	Streptococcus_phage	1.1e-13	50.6
WP_029186067.1\|1451083_1451263_-	hypothetical protein	A3F646	Streptococcus_phage	2.4e-11	60.7
WP_044752394.1\|1451269_1452409_-\|capsid	phage major capsid protein	A3F645	Streptococcus_phage	1.4e-117	57.2
WP_079394048.1\|1452420_1453221_-\|protease	Clp protease ClpP	A0A1S5SFF8	Streptococcus_phage	1.4e-58	54.7
WP_044675334.1\|1453174_1454383_-\|portal	phage portal protein	A3F643	Streptococcus_phage	1.0e-97	47.6
WP_029176332.1\|1455569_1455818_-	hypothetical protein	A0A1X9I5Y1	Streptococcus_phage	7.3e-27	65.9
WP_044670330.1\|1455871_1457602_-\|terminase	terminase large subunit	A3F641	Streptococcus_phage	6.0e-293	83.0
WP_029186075.1\|1457615_1457933_-\|terminase	terminase	A3F640	Streptococcus_phage	2.1e-34	73.3
WP_044675318.1\|1458116_1458392_-	HNH endonuclease	A3F639	Streptococcus_phage	2.1e-22	55.8
WP_024385334.1\|1458835_1459042_+	hypothetical protein	M1NRR1	Streptococcus_phage	5.8e-30	100.0
WP_024378879.1\|1459276_1459702_+	hypothetical protein	NA	NA	NA	NA
WP_044675317.1\|1459723_1460164_+	hypothetical protein	NA	NA	NA	NA
WP_044675316.1\|1460221_1460443_+	hypothetical protein	M1PF86	Streptococcus_phage	7.9e-33	93.2
WP_153594623.1\|1460457_1460625_+	hypothetical protein	NA	NA	NA	NA
WP_044675315.1\|1460714_1461023_+	hypothetical protein	M1PRP3	Streptococcus_phage	4.6e-31	68.3
WP_044675314.1\|1461039_1461408_-	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_044675313.1\|1461397_1461862_-	hypothetical protein	NA	NA	NA	NA
WP_029172484.1\|1461955_1462516_-\|integrase	site-specific integrase	A3F636	Streptococcus_phage	1.2e-61	61.8
WP_044675312.1\|1462689_1463085_-	hypothetical protein	A0A1L2JYR5	Streptococcus_phage	4.5e-39	66.7
WP_044675311.1\|1463074_1463338_-	hypothetical protein	NA	NA	NA	NA
WP_052502175.1\|1463334_1463853_-	hypothetical protein	NA	NA	NA	NA
WP_044675310.1\|1463999_1464389_-	hypothetical protein	C5J998	Streptococcus_phage	7.6e-31	53.9
WP_044675308.1\|1464581_1464998_-	single-stranded DNA-binding protein	C5J996	Streptococcus_phage	2.7e-58	81.3
WP_044675307.1\|1465001_1465265_-	helix-turn-helix transcriptional regulator	M1PSI3	Streptococcus_phage	4.1e-36	81.4
WP_044675306.1\|1465265_1465469_-	hypothetical protein	M1NSG7	Streptococcus_phage	3.4e-30	97.0
WP_044675305.1\|1465465_1465678_-	hypothetical protein	A0A1X9I5N5	Streptococcus_phage	1.2e-17	60.9
WP_161944304.1\|1465670_1465760_-	hypothetical protein	NA	NA	NA	NA
WP_044675330.1\|1466441_1466741_-	hypothetical protein	NA	NA	NA	NA
WP_044675304.1\|1466785_1467535_-	site-specific DNA-methyltransferase	A0A1S5SE41	Streptococcus_phage	1.8e-137	95.2
WP_153594624.1\|1467703_1467871_-	hypothetical protein	NA	NA	NA	NA
WP_029743243.1\|1467870_1468089_-	hypothetical protein	C5J988	Streptococcus_phage	5.2e-05	36.7
WP_153308618.1\|1468853_1469030_-	hypothetical protein	NA	NA	NA	NA
WP_024376893.1\|1469032_1469287_-	hypothetical protein	NA	NA	NA	NA
WP_029172958.1\|1469288_1469477_-	hypothetical protein	NA	NA	NA	NA
WP_044675301.1\|1469473_1469758_-	hypothetical protein	A0A1P8VVZ3	Streptococcus_phage	5.7e-44	88.3
WP_044675300.1\|1469800_1470145_-	hypothetical protein	A0A1P8VVU1	Streptococcus_phage	1.1e-33	66.7
WP_044675299.1\|1470357_1470561_+	hypothetical protein	M1PLB3	Streptococcus_phage	7.5e-22	86.6
WP_044667114.1\|1470717_1470912_-	hypothetical protein	NA	NA	NA	NA
WP_044675298.1\|1470922_1471126_-	hypothetical protein	A0A1S5SEI7	Streptococcus_phage	4.5e-19	78.5
WP_044675297.1\|1471188_1471659_+	hypothetical protein	A0A1P8VVS1	Streptococcus_phage	2.4e-55	65.4
WP_044675296.1\|1472095_1472461_+	helix-turn-helix transcriptional regulator	A0A1S5SBE7	Streptococcus_phage	3.3e-44	75.6
WP_029997220.1\|1472467_1472848_+	ImmA/IrrE family metallo-endopeptidase	A0A1P8VVS0	Streptococcus_phage	3.8e-67	99.2
WP_044675295.1\|1473001_1474018_+	Abi family protein	M1PS09	Streptococcus_phage	2.1e-48	37.0
WP_044675294.1\|1474156_1475245_+\|integrase	site-specific integrase	B3GVW7	Streptococcus_phage	1.0e-104	53.7
1484075:1484092	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1660391 : 1721358

Streptococcus_phage(18.75%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024394343.1\|1660391_1660643_-\|holin	holin	NA	NA	NA	NA
WP_023370621.1\|1660885_1661650_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_043032954.1\|1661728_1662412_-	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_011922273.1\|1663033_1663831_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	6.2e-11	23.9
WP_024394341.1\|1663817_1664681_-	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	3.9e-11	24.1
WP_024381773.1\|1664680_1665445_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_011922270.1\|1665455_1666067_-	ECF transporter S component	NA	NA	NA	NA
WP_024394340.1\|1666071_1666818_-	nucleoside phosphorylase	NA	NA	NA	NA
WP_114876555.1\|1668047_1669398_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	9.7e-65	51.8
WP_024394835.1\|1669435_1670125_-	thiamine phosphate synthase	NA	NA	NA	NA
WP_024381771.1\|1670117_1670903_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_024394834.1\|1670907_1671705_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_024394833.1\|1671701_1672349_-	HAD family hydrolase	NA	NA	NA	NA
WP_024394832.1\|1672833_1675113_-	DNA helicase PcrA	A7KV33	Bacillus_phage	1.2e-128	41.4
WP_024394831.1\|1675387_1676599_-	Fic family protein	Q9AZ49	Lactococcus_phage	6.0e-66	35.9
WP_024394830.1\|1676740_1678108_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_002935455.1\|1678292_1678631_-	hypothetical protein	NA	NA	NA	NA
WP_024394829.1\|1678797_1680588_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	0.0e+00	98.8
WP_050571225.1\|1680615_1681008_-	hypothetical protein	NA	NA	NA	NA
WP_024394827.1\|1681230_1682181_-	dioxygenase	NA	NA	NA	NA
WP_024394826.1\|1682312_1683020_-	aquaporin family protein	M1HJ77	Paramecium_bursaria_Chlorella_virus	6.9e-22	29.2
WP_024394825.1\|1683033_1684863_-	type 1 glycerol-3-phosphate oxidase	NA	NA	NA	NA
WP_015646924.1\|1684941_1686453_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_029178682.1\|1686681_1688145_-	HTH domain-containing protein	NA	NA	NA	NA
WP_043033039.1\|1688134_1689487_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_024394822.1\|1689855_1690791_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_024394821.1\|1690863_1691940_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_114876556.1\|1692280_1693483_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	2.3e-211	93.5
WP_023370648.1\|1694003_1694291_-	DUF1905 domain-containing protein	NA	NA	NA	NA
WP_023370650.1\|1694299_1694953_-	DNA alkylation repair protein	NA	NA	NA	NA
WP_043033068.1\|1694954_1695452_-	N-acetyltransferase	NA	NA	NA	NA
WP_023370654.1\|1695452_1696070_-	DUF5052 family protein	A0A2K9VCV0	Lactobacillus_phage	7.6e-49	50.8
WP_023370656.1\|1696625_1698500_-	AAA family ATPase	V9QJA7	Oenococcus_phage	2.1e-70	30.0
WP_024394389.1\|1699777_1701394_-	SAM-dependent DNA methyltransferase	A0A2H4PQP4	Staphylococcus_phage	1.3e-31	32.1
WP_024394388.1\|1701398_1704452_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_024394387.1\|1704632_1705949_-	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	9.4e-89	40.6
WP_029174849.1\|1706166_1706976_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_002935394.1\|1707015_1708686_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_022540619.1\|1709189_1709885_+	phosphopantothenate--cysteine ligase	NA	NA	NA	NA
WP_002935392.1\|1709877_1710426_+	phosphopantothenoylcysteine decarboxylase	A0A068EHP1	Penguinpox_virus	2.8e-23	37.8
WP_002935390.1\|1710412_1710982_+	ECF transporter S component	NA	NA	NA	NA
WP_002935389.1\|1711072_1712791_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	0.0e+00	99.0
WP_024394384.1\|1713687_1716786_-	DEAD/DEAH box helicase family protein	A0A2K5B2C2	Erysipelothrix_phage	1.6e-134	34.6
WP_074411012.1\|1716789_1718304_-	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	8.8e-99	41.1
WP_043033066.1\|1719748_1720360_-	DUF3885 domain-containing protein	NA	NA	NA	NA
WP_002935376.1\|1720482_1721358_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_6

1726773 : 1742550

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002935370.1\|1726773_1727601_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	8.3e-152	99.6
WP_009909675.1\|1727900_1728800_+	cation transporter	M1Q1N9	Streptococcus_phage	1.3e-161	98.3
WP_002935368.1\|1728816_1729170_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.9e-60	100.0
WP_002935366.1\|1729153_1729660_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.2e-92	97.0
WP_002935365.1\|1729662_1730844_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	2.7e-220	99.7
WP_002935364.1\|1731217_1731775_-	GNAT family acetyltransferase	M1PSC3	Streptococcus_phage	4.5e-93	98.4
WP_002935363.1\|1731774_1732866_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.5e-204	98.6
WP_002935362.1\|1733335_1734199_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.1e-158	99.7
WP_002935361.1\|1734200_1734518_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.1e-54	100.0
WP_002935359.1\|1734537_1735422_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	3.6e-153	98.3
WP_002935358.1\|1735418_1736057_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.6e-113	98.6
WP_002935357.1\|1736231_1737098_+	YitT family protein	M1Q1P6	Streptococcus_phage	4.6e-153	99.7
WP_002935355.1\|1737134_1738406_-	hypothetical protein	M1PLC8	Streptococcus_phage	1.7e-212	100.0
WP_002935354.1\|1738411_1739239_-	hypothetical protein	M1PFV6	Streptococcus_phage	6.6e-133	97.8
WP_002935353.1\|1739332_1739989_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	2.1e-113	99.1
WP_002935351.1\|1740167_1740311_-\|transposase	transposase	NA	NA	NA	NA
WP_043033064.1\|1740312_1742550_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	4.9e-98	94.6

DBSCAN-SWA_7

1869304 : 1885073

Streptococcus_phage(92.31%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024390822.1\|1869304_1871131_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	4.6e-25	27.1
WP_013730278.1\|1871160_1871892_-	tyrosine protein phosphatase	NA	NA	NA	NA
WP_013730277.1\|1871930_1872617_-	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	1.1e-104	92.1
WP_013730276.1\|1872626_1873316_-	capsular polysaccharide biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	8.0e-108	92.1
WP_013730275.1\|1873331_1874771_-	LCP family protein	A0A1X9I5X1	Streptococcus_phage	2.2e-200	87.6
WP_024381470.1\|1874900_1875635_-	peroxide stress protein YaaA	A0A1X9I5I0	Streptococcus_phage	7.7e-117	96.3
WP_013730273.1\|1875757_1877017_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	2.7e-242	99.8
WP_014636868.1\|1877115_1877967_-	DegV family protein	A0A1X9I5J4	Streptococcus_phage	2.0e-153	98.9
WP_011922106.1\|1878093_1878498_+	TetR/AcrR family transcriptional regulator	A0A1X9I6A2	Streptococcus_phage	3.2e-64	99.3
WP_024394527.1\|1878520_1879306_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	1.3e-130	95.4
WP_011922104.1\|1879315_1880554_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.0e-217	96.8
WP_024394528.1\|1880618_1881695_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.7e-192	98.9
WP_024394529.1\|1881858_1884372_-	bifunctional DnaQ family exonuclease/ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	0.0e+00	98.9
WP_024394530.1\|1884434_1885073_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.3e-125	99.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP030124

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection