CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP031239	Haemophilus influenzae strain M13034 chromosome, complete genome	1 crisprs	cas3,WYL,csa3,DEDDh,DinG	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP031239_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031239_1

950885-951042

Orphan

Consensus_repeat	Method
CCTAGGGTAGGTATACCCTAGGTTAGTTTGATGTTACCCCTTTGGGGTAAGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP031239_1

>merge|NZ_CP031239|1|950885-951042|CRISPRCasFinder
CCTAGGGTAGGTATACCCTAGGTTAGTTTGATGTTACCCCTTTGGGGTAAGTGGAAAGTTCTTCAATGGGGCTGAACTTAAGGTGTACCTATATGTGAGTCTGTTCCTAGGGTAGGTATACCCTAGGTTAGTTTGATATTACCCCTTTGGGGTAAGTG

>NZ_CP031239|1|1|950885-951042|CRISPRCasFinder
CCTAGGGTAGGTATACCCTAGGTTAGTTTGATGTTACCCCTTTGGGGTAAGTG	GAAAGTTCTTCAATGGGGCTGAACTTAAGGTGTACCTATATGTGAGTCTGTT
CCTAGGGTAGGTATACCCTAGGTTAGTTTGATATTACCCCTTTGGGGTAAGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031239.1\|WP_050848281.1\|952908_953865_+\|lauroyl-Kdo(2)-lipid-IV(A)-myristoyltransferase	unknown	unknown	gnl\|CDD\|236355
NZ_CP031239.1\|WP_050948510.1\|955012_956302_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP031239.1\|WP_050948520.1\|939344_939905_+\|Sec-independent-protein-translocase-subunit-TatB	unknown	unknown	gnl\|CDD\|179334
NZ_CP031239.1\|WP_050948516.1\|944443_945049_+\|replication-initiation-negative-regulator-SeqA	unknown	unknown	gnl\|CDD\|236874
NZ_CP031239.1\|WP_050948515.1\|945051_946410_+\|o-succinylbenzoate--CoA-ligase	unknown	unknown	gnl\|CDD\|236363
NZ_CP031239.1\|WP_050948511.1\|952094_952862_+\|TSUP-family-transporter	unknown	unknown	gnl\|CDD\|182593
NZ_CP031239.1\|WP_050948513.1\|949785_950859_+\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
NZ_CP031239.1\|WP_005628250.1\|957127_957607_-\|threonine/serine-exporter-family-protein	unknown	unknown	gnl\|CDD\|182143
NZ_CP031239.1\|WP_005671209.1\|942504_942945_-\|ferric-iron-uptake-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236527
NZ_CP031239.1\|WP_076773622.1\|946437_949776_+\|mechanosensitive-channel-MscK	unknown	unknown	gnl\|CDD\|236892
NZ_CP031239.1\|WP_080358466.1\|953921_954962_+\|selenide,-water-dikinase-SelD	unknown	unknown	gnl\|CDD\|234870
NZ_CP031239.1\|WP_040034093.1\|958507_959770_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|226911
NZ_CP031239.1\|WP_050948512.1\|951216_952077_+\|penicillin-insensitive-murein-endopeptidase	unknown	unknown	gnl\|CDD\|226293
NZ_CP031239.1\|WP_050948517.1\|943591_944374_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|182637
NZ_CP031239.1\|WP_050948519.1\|939914_940685_+\|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|182840
NZ_CP031239.1\|WP_005667922.1\|957608_958379_-\|threonine/serine-exporter-ThrE-family-protein	unknown	unknown	gnl\|CDD\|225514
NZ_CP031239.1\|WP_050948507.1\|960050_961439_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP031239.1\|WP_050948518.1\|941046_942396_+\|NADP-specific-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|181834
NZ_CP031239.1\|WP_050948508.1\|956862_957081_+\|YdcH-family-protein	unknown	unknown	gnl\|CDD\|225397
NZ_CP031239.1\|WP_005648709.1\|942972_943497_-\|flavodoxin-FldA	unknown	unknown	gnl\|CDD\|236439

Protein	Function_ID	Function_description	E-value
NZ_CP031239.1\|WP_050848281.1\|952908_953865_+\|lauroyl-Kdo(2)-lipid-IV(A)-myristoyltransferase	gnl\|CDD\|236355	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated.	0
NZ_CP031239.1\|WP_050948510.1\|955012_956302_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP031239.1\|WP_050948520.1\|939344_939905_+\|Sec-independent-protein-translocase-subunit-TatB	gnl\|CDD\|179334	PRK01770, PRK01770, Sec-independent protein translocase subunit TatB.	2.90308e-60
NZ_CP031239.1\|WP_050948516.1\|944443_945049_+\|replication-initiation-negative-regulator-SeqA	gnl\|CDD\|236874	PRK11187, PRK11187, replication initiation negative regulator SeqA.	2.59512e-107
NZ_CP031239.1\|WP_050948515.1\|945051_946410_+\|o-succinylbenzoate--CoA-ligase	gnl\|CDD\|236363	PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional.	0
NZ_CP031239.1\|WP_050948511.1\|952094_952862_+\|TSUP-family-transporter	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	2.435e-107
NZ_CP031239.1\|WP_050948513.1\|949785_950859_+\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
NZ_CP031239.1\|WP_005628250.1\|957127_957607_-\|threonine/serine-exporter-family-protein	gnl\|CDD\|182143	PRK09917, PRK09917, threonine/serine exporter.	6.82647e-59
NZ_CP031239.1\|WP_005671209.1\|942504_942945_-\|ferric-iron-uptake-transcriptional-regulator	gnl\|CDD\|236527	PRK09462, fur, ferric uptake regulator; Provisional.	3.11871e-71
NZ_CP031239.1\|WP_076773622.1\|946437_949776_+\|mechanosensitive-channel-MscK	gnl\|CDD\|236892	PRK11281, PRK11281, mechanosensitive channel MscK.	0
NZ_CP031239.1\|WP_080358466.1\|953921_954962_+\|selenide,-water-dikinase-SelD	gnl\|CDD\|234870	PRK00943, PRK00943, selenide, water dikinase SelD.	0
NZ_CP031239.1\|WP_040034093.1\|958507_959770_-\|HlyC/CorC-family-transporter	gnl\|CDD\|226911	COG4536, CorB, Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism].	0
NZ_CP031239.1\|WP_050948512.1\|951216_952077_+\|penicillin-insensitive-murein-endopeptidase	gnl\|CDD\|226293	COG3770, MepA, Murein endopeptidase [Cell envelope biogenesis, outer membrane].	1.72366e-177
NZ_CP031239.1\|WP_050948517.1\|943591_944374_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|182637	PRK10673, PRK10673, esterase.	5.74567e-103
NZ_CP031239.1\|WP_050948519.1\|939914_940685_+\|twin-arginine-translocase-subunit-TatC	gnl\|CDD\|182840	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC.	2.62526e-129
NZ_CP031239.1\|WP_005667922.1\|957608_958379_-\|threonine/serine-exporter-ThrE-family-protein	gnl\|CDD\|225514	COG2966, COG2966, Uncharacterized conserved protein [Function unknown].	1.72497e-82
NZ_CP031239.1\|WP_050948507.1\|960050_961439_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP031239.1\|WP_050948518.1\|941046_942396_+\|NADP-specific-glutamate-dehydrogenase	gnl\|CDD\|181834	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase.	0
NZ_CP031239.1\|WP_050948508.1\|956862_957081_+\|YdcH-family-protein	gnl\|CDD\|225397	COG2841, COG2841, Uncharacterized protein conserved in bacteria [Function unknown].	7.24298e-21
NZ_CP031239.1\|WP_005648709.1\|942972_943497_-\|flavodoxin-FldA	gnl\|CDD\|236439	PRK09267, PRK09267, flavodoxin FldA; Validated.	5.15398e-105

>NZ_CP031239.1|WP_050948513.1|949785_950859_+|chorismate-synthase
MAGNTIGQLFRVTTFGESHGIALGCIVDGVPPNLELSEQDIQPDLDRRKPGTSRYTTPRREDDEVQILSGVFEGKTTGTSIGMIIKNADQRSQDYGEIKDRFRPGHADFTYQQKYGIRDYRGGGRSSARETAMRVAAGAIAKKYLREYFGIEVRGFLSQIGHVKILPQTIGEIDWEKVNSNPFFCPDESAVEKFDELIRELKKEGDSIGAKLTVIAENVPVGLGEPVFDRLDADLAHALMGINAVKGVEIGDGFAVVEQRGSEHRDEMTPNGFESNHAGGILGGISSGQPIIATIALKPTSSITISGRSINLNGEPVEVVTKGRHDPCVGIRAVPIAEAMMAIVLLDHLLRFKAQCK
>NZ_CP031239.1|WP_076773622.1|946437_949776_+|mechanosensitive-channel-MscK
MIRKLMKTPPFFTALFASAMFTLSVSQGALGANSTNVLPTEQSLKADLANAQKMSEGEAKNTLLAELQTSIDLLQQIQAQQKINDALQTTLSHSESEIRKNNAEIQALKKQQETATSTDYNAQSQDYLQNSLAKLNDQLQDTQNALGAANAQLAGQNSISERAQAALTENVVRTQQINQQLANNDIGSSLRKQYQVELQLIDLKNSYNQNLLKNNDQLSLLYQSRYDLLNLRLQVQQQNIIAIQEVINQKNLQQSQNQLEQAQQQQQKTVQNDYIQKELDRNAQLGQYLLQQTEKANSLTQDELRMRNILDSLTQTQHTIDEQISALQGTLVLSRIIQQQKQKLPTNLNIQGLSKQIADLRVHIFDITQKRNELYDLNNYINKVESEDGKQFTEAERTQVKTLLTERRKMTSDLIKSLNNQLNLAISLELTQQQITQISDQIQSKLEQQSFWVKSNNPINLDWIKMLPRALIEQFNGMLKKLGFPTNYDNLPYLLMYFLGLFIVGGAIFKFKNRIKQQLNKINREIHRLDTDSQWSTPLALLLTAFLTLSSTLWFLAVCQMIGFFFFKNPEEFWHWSFSMAGYWWFFTFWISLFRPNGIFVNHFESSKENAQRFRGVIQRIIIVIVLLLNTSVFSNVTDAGLANDVLGQINTITALIFCAAIIAPRFNRVLRSYEPETNKHHWLIRIVQIGLRLIPVGLIVLIVLGYYYTALNLIEHFIHSYIAWCVWWLVRNTIYRGITVSSRRLAHRRLAEKRRQKALENNYENISSDDVVAVGEPEESLALNDVRSQLLRFVDLFIWTALLGIFYYVWSDLVTVVSYLREITLWQQTTTTDAGTVVESITLFNLLVALVIVGITYVLVRNISGILEVLIFSRVNLSQGTPYTITTLLTYIFIAIGGAWAFATLGMSWSKLQWLFAALSVGLGFGMQEIFANFVSGIILLFERPIRVGDVVTINGVSGTVAKIRIRAITLIDFDRKEVIVPNKSFVTGQVTNWALSNTMTRLVISVGVAYGSDLTLVRQLLLQAADEQPTVLRDPKPSAYFLTFGASTLDHELRVYVEQVGDRTSTTDAINRRINELFAEHNIDIAFNQLDVFIKNNDTGEEIPFVDVKK
>NZ_CP031239.1|WP_050948515.1|945051_946410_+|o-succinylbenzoate--CoA-ligase
MYPWQHFAIQPDFSDKIALRTKQSDALTWIELTTKINQTVAFLQKKGVNAESAVAFVGKNSEKILFLYLATIQLGAKVLGINPAFPQEKIAELCEFYQIDFCFYDKDLLNLQEIDVFTQKADFFRPATMTLTSGSTGLPKAVVHNVQAHLDNAKGVCNLMKFDCNQSWLLSLPLYHVSGQGIVWRWLYCGAQLHFPKDDFYASLLETTHVSLVPTQLQRLLDYLQENSIISFSTRHILLGGTHIPAELTKKIVKYGIETYSGYGMTEMASTVFAKKSDEKQGVGQPLLGREYCLVNDEIWLKGAGLAMGYWKDRQIVSLTNNQGWLQTKDKGVLQEGELVIIGRLDNMFISGGENIQPEEIEQVIIQHSSVNQVFVLPQKNKEFGQRPVALVDFNESFSKSAVENLMFFLQDKLARFKQPIAYYPLPLMLGKGIKISRKQLADWLAKQDKIN
>NZ_CP031239.1|WP_050948516.1|944443_945049_+|replication-initiation-negative-regulator-SeqA
MKIIEVDEELYQYIASQTRSIGESASDILRRLLSLPVHTSSVDDLVLTSAETNKSADQKPEQAINVKEVNIKTTKKQSINAINQIVEKVQTLLNSDEFKEESKAVVRFLAILRVLYRTNPESFAQATESLQGRTRVYFARDEATLLMAGNHTKPKQIPDTPYWVITNTNSGRKMLMLEGAMQSMELPETLIDEVRSYFTVN
>NZ_CP031239.1|WP_050948517.1|943591_944374_-|alpha/beta-fold-hydrolase
MVKSLLNYQFHQVKQTINTPVLIFIHGLFGDMDNLGVIARAFSEHYNILRIDLRNHGHSFHSEKMNYQLMAEDVIEVIRHLSLSKVILIGHSMGGKTAMKITALCPELVEKLIVIDMSPLPYKGFGHKDVFNGLFAVKNAKPENRQQAKPILKQEINDEDVVQFMLKSFDVNSADCFRFNLTALFNNYADIMDWEKVRVFTPTLFIKGGNSSYIKIENSEKILEQFPNATAFTINGSGHWVHAEKPDFVIRAIKRFLNKN
>NZ_CP031239.1|WP_005648709.1|942972_943497_-|flavodoxin-FldA
MAIVGLFYGSDTGNTENIAKQIQKQLGSDLIDIRDIAKSSKEDIEAYDFLLFGIPTWYYGEAQADWDDFFPTLEEIDFTDKLVGIFGCGDQEDYADYFCDAIGTVRDIIEPHGAIVVGNWPTEGYNFEASKALLEDGTFIGLCIDEDRQPELTAERVEKWCKQIYDEMCLAELA
>NZ_CP031239.1|WP_005671209.1|942504_942945_-|ferric-iron-uptake-transcriptional-regulator
MSEENIKLLKKAGLKITEPRLTILALMQNHKNEHFSAEDVYKILLEQGSEIGLATVYRVLNQFDEAHIVIRHNFEGNKSVFELAPTEHHDHIICEDCGKVFEFTDNIIEQRQREISEKYGIKLKTHNVYLYGKCSDINHCDENNSK
>NZ_CP031239.1|WP_050948518.1|941046_942396_+|NADP-specific-glutamate-dehydrogenase
MSKVASLDAFLTKVVQRDGHQPEFLQAVREVFTSIWPFLEANPKYRSEALLERLVEPERAFQFRVAWTDDKGQVQVNRAFRVQFNSAIGPFKGGMRFHPSVNLSILKFLGFEQIFKNALTTLPMGGAKGGSDFDPKGKSDAEVMRFCQALMAELYRHVGADTDVPAGDIGVGGREVGYLAGYMKKLSNQSACVFTGRGLSFGGSLIRPEATGYGLVYFAQAMLAEKGDSFAGKVVSVSGSGNVAQYAIEKALSLGAKVVTCSDSSGYVYDPNGFTTEKLAALFEIKNTKRGRVKDYAEQFGLQYFEGKRPWEVKVDIALPCATQNELELSDAQLLIKNGVKLVAEGANMPTTIEATEALLAANVLFGPGKAANAGGVATSGLEMAQSSQRLYWTAEEVDAQLHRIMLDIHTNCKKYGTIEGQENINYVVGANVAGFVKVADAMLAQGVY
>NZ_CP031239.1|WP_050948519.1|939914_940685_+|twin-arginine-translocase-subunit-TatC
MSNVDESQPLITHLVELRNRLLRCVICVVLAFVALVYFSNDIYHFVAAPLTAVMPKGATMIATNIQTPFFTPIKLTVIVAIFISVPYLLYQIWAFIAPALYQHEKRMIYPLLFSSTILFYCGVAFAYYVVFPFVFSFFTQTAPEGVAIATDISSYLDFALALFLAFGVCFEVPIAIILLCWTGVTTVKALSEKRPYIIVVAFFIGMLLTPPDVFSQTLLAVPMCLLFELGLLVARFYQPKDDESAVENNDESEKTQ
>NZ_CP031239.1|WP_050948520.1|939344_939905_+|Sec-independent-protein-translocase-subunit-TatB
MFDIGFSELILLMILGLVVLGPKRLPIAIRTVMDWVKTIRGLAANVQNELKQELKLQELQDSIKKAESLNLQALSPELSKTVEELKARADKMKAELEDKAVQAGTTVEDQIKEIKSAAENAEKPQNAISVEEAAETLSEAEKTPTDLTALETHEKAELNTHLSSYYPPDDIEIAPASKSQSSKTKS
>NZ_CP031239.1|WP_050948512.1|951216_952077_+|penicillin-insensitive-murein-endopeptidase
MNKILLKKTIIFTALFSLNVAASPLDWQKVKRPIPSGDGKAKPIGSYTNGCIIGAQALPPKGDGYQVIRMNRNRYYGHPNMIQYLERLGQRAKAAGLPTMLVGDIAMPGGGRFLTGHASHQMGLDADIWLRMGEMSDADALNSDGKGLLVVDRKAQRVDERVWNSNHATLIKLAAKDPNVARIFVNPAIKVKLCQTAGNDRGWLHKVRPWYGHDSHFHVRLTCPADASYCENQAPVPPSDGCGDELYSWFEPPKPGASVSKPKVTPPEPFLCQQILNSPNRNEWLE
>NZ_CP031239.1|WP_050948511.1|952094_952862_+|TSUP-family-transporter
MDIGIDLLAILFCVGFVASFIDAIAGGGGLITIPALLMTGMPPAMALGTNKLQAMGGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFRKILPFLILVIGLYFLFTPKLGDEDRKQRLNYLLFGLLISPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKATAHAKVMNFTSNLASFALFLLGGQILWKVGFVMMAGSILGANLGAKMVMTKGKTLIRPMVVIMSFMMTAKMVYDQGWFHF
>NZ_CP031239.1|WP_050848281.1|952908_953865_+|lauroyl-Kdo(2)-lipid-IV(A)-myristoyltransferase
MSDNQQNLRLTARVGYEAHFSWSYLKPQYWGIWLGIFFLLLLAFVPFRLRDKLAGKLGIWIGHKAKKQRTRAQTNLQYCFPHWTEQQREQVIDKMFAVVAQVMFGIGEIAIRSKKHLQKRSEFIGLKHIEQAKAECKNIILMVPHGWAIDASGIILHTQGMPMTSMYNPHRNPLVDWLWTIIRQRFGGKMHARQNGIKPFLNHVRKGEMGYYLPDEDFGAEQSVFVDFFGTYKATLPGLNKMAKLSKAVVIPMFPRYNAETGKYEMEIHPAMNLSDDPEQSARAMNEEIESFVTPTPEQYVWILQLLRTRKDGEDLYD
>NZ_CP031239.1|WP_080358466.1|953921_954962_+|selenide,-water-dikinase-SelD
MEEKIRLTQYSHGAGUGCKISPKVLGTILHSELEKFYDPNLLVGNETADDAAVYDLGNGTAIISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMGIAILGFPTNVLPAEVAQKIVDGGRFACHQAGIALAGGHSIDSPEPIFGLAVTGVIDTEKVKRNASAKSGCKLYMTKPLGIGILTTAEKKGKLKPEHQGLATAAMFQMNSIGSQFSQVDGVTAMTDVTGFGLLGHLIEICEGSNLSAVVFADKIKTLDGVKDYIAQGCVPGGTGRNFESYGHKVGLLTEEQKAILCDPQTSGGLLVAVEPNSVQTVIEIAKDAGIDLYEVGELKSKSESDVAVEIA
>NZ_CP031239.1|WP_050948510.1|955012_956302_-|serine--tRNA-ligase
MIDPNLLRNNLSEVAEKLKVKRNFILDTEKLTSLEEQRKNLQVTTENLQAERNSRSKAIGAAKARGENIEPLLAEVDNMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDDTENKEILRWGTPRTFDFEVKDHVALGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLRPYMGGLEIIGK
>NZ_CP031239.1|WP_050948508.1|956862_957081_+|YdcH-family-protein
MFPEYRDLITQLKSNDAYFDRLFEKHNELDHEIKNMQENIQLATHMEIEALKKEKLRIKDELYEYLKKKSQE
>NZ_CP031239.1|WP_005628250.1|957127_957607_-|threonine/serine-exporter-family-protein
MLLDITIFILKLLDDMLFAAIPAVGFALVFNVPPKALKYCAILAALGHVTRTLLLHINMPIVFATFFATCVIGFLGVHLSHRYLAHPKAFTVAAIIPMIPGVHAYKAMISMVQIHHFGFSDALFEQMISSFINTSFILGAIVFGLALPGLLFYRQKPVV
>NZ_CP031239.1|WP_005667922.1|957608_958379_-|threonine/serine-exporter-ThrE-family-protein
MEHEYQRAVTRVCVQTALLLLQHGAESTVVVQMAQRLGVALGVESVECALTANAVVLTTLSDNHCITTARKNTDKGINMQMVTDVQRIVIAVEHHLYELEIAQRKLDQLKPLKYNRWLVVFMIGLSCAAFAHLSGGDWIICGITFVAAAIAMFVRQEFSKRHYNPLIVFSITSFVASLISGVSLKYNLGNDPQIALASSVLLLVPGFPLINSLADILKGYVNMGLGRWTIATILTFGACLGIVFALSLLHITTWGH
>NZ_CP031239.1|WP_040034093.1|958507_959770_-|HlyC/CorC-family-transporter
MDSIPLSTLFIILIICLVLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLSFILIFNNLVNISASAIATVIGMRLYGDAGVAIATGLLTFVMLVFSEIFPKTVAAMHAEKVSFFSSHILTSLLKIFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEELRSIVSEAGEATPNEQHPQMLLSILDMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLNHAAHNRVVLYKSSLDEQVLGILRVREAFRLLLEKNEFTKETLIRAADEVYFIPESTPLKTQLANFRANKERIGLVVDEYGDIKGLVTLEDILEEIVGDFTTSTAPSIDKEVIQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTFNGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQAKVVKL
>NZ_CP031239.1|WP_050948507.1|960050_961439_+|signal-recognition-particle-protein
MFENLSDRLSKTLRNITGKGRLTEDNIKETLREVRMALLEADVALPVVREFIAKVKESALGEEVNKSLTPGQEFLKIVQRELEKAMGEANESLNLATQPPAVILMAGLQGAGKTTSVGKLAKFLRERHKKKVLVVSADVYRPAAIKQLETLAQSVGVDFFPSDVKQNPVDIAKAALADAKLKFYDVLIVDTAGRLHVDTEMMDEIKQVNAALNPIETLFTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTEALEPFHPDRVASRILGMGDVLSLIEDLERSVDREKAEKMAQKFKKGDDFTLDDFREQLIEMKKMGGMMSMLDKLPGAKNLPDHVKNQVDDKMFIKMEAIINSMTLKERANPDIIKGSRRRRIALGSGTQVQDVNKLLKQFDEMQRMMKKMRKGGMAKMMRGMQGLMGGGLGGLGGLGGMFKR

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

681848 : 690395

Escherichia_phage(83.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061671259.1\|681848_682349_-	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	3.2e-13	31.8
WP_050948635.1\|682348_682960_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	3.0e-21	32.5
WP_050948634.1\|683071_683911_-	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	8.5e-19	31.1
WP_038441398.1\|683912_684530_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.8e-73	57.8
WP_061671258.1\|684540_686964_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	9.1e-223	50.6
WP_050948632.1\|687216_688326_+	transglutaminase family protein	NA	NA	NA	NA
WP_050948631.1\|688300_688663_+	hypothetical protein	NA	NA	NA	NA
WP_050948630.1\|688672_688951_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_050948629.1\|689741_690395_-	ABC transporter ATP-binding protein	M1HXU1	Acanthocystis_turfacea_Chlorella_virus	3.2e-05	25.7

DBSCAN-SWA_2

723382 : 734374

Haemophilus_phage(70.0%)

head,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050948608.1\|723382_724717_-	phage morphogenesis protein	F6MIL2	Haemophilus_phage	1.4e-108	45.6
WP_021034873.1\|727054_727261_-	hypothetical protein	NA	NA	NA	NA
WP_050948607.1\|727275_727617_-	hypothetical protein	A0A0M3LSI2	Mannheimia_phage	1.8e-20	50.5
WP_050948606.1\|727616_727988_-	hypothetical protein	A0A0M3LRV6	Mannheimia_phage	6.8e-37	65.0
WP_050948605.1\|727997_729413_-\|tail	phage tail protein	B7SDP8	Haemophilus_phage	7.3e-156	62.0
WP_005688541.1\|729405_729588_-	DUF2635 domain-containing protein	A0A0M3LQM9	Mannheimia_phage	8.2e-12	64.8
WP_050948604.1\|729932_730238_-	hypothetical protein	B7SDP3	Haemophilus_phage	1.6e-20	50.0
WP_050948603.1\|730277_731198_-\|head	head protein	B7SDP1	Haemophilus_phage	7.9e-127	71.9
WP_050948602.1\|731197_732247_-	hypothetical protein	B7SDN9	Haemophilus_phage	2.5e-108	61.0
WP_050948601.1\|732500_732986_-	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	4.6e-33	50.9
WP_050948600.1\|733096_734374_-\|capsid	minor capsid protein	B7SDN5	Haemophilus_phage	1.3e-122	52.9

DBSCAN-SWA_3

1151379 : 1157859

Sodalis_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042602652.1\|1151379_1151670_+	integration host factor subunit alpha	Q2A099	Sodalis_phage	1.9e-10	38.2
WP_050949225.1\|1151722_1152208_+	endopeptidase	A0A2H5BM69	Streptomyces_phage	7.8e-17	40.2
WP_005662473.1\|1152272_1153226_+	WYL domain-containing transcriptional regulator	NA	NA	NA	NA
WP_050949224.1\|1154166_1154877_+	NAD-dependent deacylase	R9TG77	Vibrio_phage	8.5e-28	37.6
WP_050847951.1\|1154925_1155930_-	cytochrome c	Q9JMN3	Wolbachia_phage	1.2e-19	37.8
WP_050949223.1\|1156150_1156351_+	cell division protein FtsK	NA	NA	NA	NA
WP_050949222.1\|1156347_1157193_+	NAD-dependent deacetylase	A0A1C3S788	Escherichia_phage	7.0e-05	24.1
WP_005662456.1\|1157577_1157859_+	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	2.5e-07	42.7

DBSCAN-SWA_4

1387593 : 1444977

Mannheimia_phage(37.5%)

portal,capsid,terminase,tRNA,protease,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050949089.1\|1387593_1388403_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_050848629.1\|1388637_1389639_+	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.8e-71	43.9
WP_050949088.1\|1390328_1391777_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_050949087.1\|1391878_1392730_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.5e-50	45.8
WP_050949086.1\|1392801_1394529_+	penicillin-binding protein activator	NA	NA	NA	NA
WP_050949085.1\|1394528_1394888_+	YraN family protein	NA	NA	NA	NA
WP_032823582.1\|1394900_1395485_+	SIS domain-containing protein	NA	NA	NA	NA
WP_032823584.1\|1395541_1396123_+	divisome-associated lipoprotein YraP	NA	NA	NA	NA
WP_050949084.1\|1396377_1398648_+	ribonucleoside-diphosphate reductase subunit alpha	I3UMG3	Colwellia_phage	2.1e-301	67.1
WP_050848624.1\|1398657_1398966_+	hypothetical protein	NA	NA	NA	NA
WP_005650087.1\|1399114_1400245_+	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	1.6e-169	78.6
WP_050949083.1\|1400359_1401589_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
WP_005667196.1\|1401695_1404503_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_114893743.1\|1404700_1405786_-	hypothetical protein	NA	NA	NA	NA
WP_005667189.1\|1406197_1406836_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_005667187.1\|1406845_1407601_-	TatD family hydrolase	NA	NA	NA	NA
WP_005632553.1\|1407652_1408213_-	YcbK family protein	NA	NA	NA	NA
WP_005667185.1\|1408228_1409698_-	murein L,D-transpeptidase	NA	NA	NA	NA
WP_005667183.1\|1409771_1411853_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	5.5e-83	32.3
WP_005667181.1\|1411880_1412519_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_005667179.1\|1412702_1413953_+	paraquat-inducible protein A	NA	NA	NA	NA
WP_005667177.1\|1413936_1416582_+	PqiB family protein	NA	NA	NA	NA
WP_050949082.1\|1416636_1417089_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
WP_050949081.1\|1417089_1417335_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
WP_050949080.1\|1417336_1417819_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_050949079.1\|1417910_1418924_-	GTP 3',8-cyclase MoaA	D5GVS6	Campylobacter_virus	4.5e-06	31.5
WP_050949078.1\|1419368_1420040_+	iron-sulfur cluster repair protein YtfE	NA	NA	NA	NA
WP_050949077.1\|1420653_1421589_+	KpsF/GutQ family sugar isomerase	A0A2P0VNK5	Tetraselmis_virus	3.6e-42	35.5
WP_050949076.1\|1421598_1422141_+	HAD family hydrolase	A0A140XBD6	Dickeya_phage	9.0e-22	42.6
WP_050949075.1\|1422239_1424396_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_050949074.1\|1424463_1425129_-	DUF2057 domain-containing protein	NA	NA	NA	NA
WP_050949073.1\|1425328_1426390_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	7.4e-20	31.7
WP_005631902.1\|1426737_1427316_+	electron transport complex subunit RsxA	NA	NA	NA	NA
WP_050949072.1\|1427403_1427985_+	electron transport complex subunit RsxB	NA	NA	NA	NA
WP_050949071.1\|1427985_1430445_+	electron transport complex subunit RsxC	NA	NA	NA	NA
WP_050949070.1\|1430449_1431526_+	electron transport complex subunit RsxD	NA	NA	NA	NA
WP_050949069.1\|1431525_1432194_+	electron transport complex subunit RsxG	NA	NA	NA	NA
WP_050949068.1\|1432195_1432903_+	electron transport complex subunit E	NA	NA	NA	NA
WP_005688005.1\|1433082_1433718_+	endonuclease III	NA	NA	NA	NA
WP_061671238.1\|1433775_1435149_+	sodium-dependent transporter	NA	NA	NA	NA
WP_050949427.1\|1437313_1437736_-	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	2.1e-18	50.9
WP_050949428.1\|1438312_1438663_-	chemotaxis protein	NA	NA	NA	NA
WP_050949429.1\|1438647_1439166_-	lysozyme	A0A0M3LPQ1	Mannheimia_phage	1.5e-37	47.7
WP_005689816.1\|1439158_1439380_-	hypothetical protein	NA	NA	NA	NA
WP_005653052.1\|1439381_1439591_-\|tail	tail protein	A0A0M3LPY0	Mannheimia_phage	4.7e-11	45.3
WP_050949430.1\|1439590_1440097_-\|head	head completion/stabilization protein	A0A0M3LNL8	Mannheimia_phage	8.1e-33	51.0
WP_050949431.1\|1440389_1441040_-\|terminase	terminase	Q19US0	Mannheimia_phage	3.5e-44	45.5
WP_050949432.1\|1441051_1442101_-\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	1.4e-87	50.7
WP_050949433.1\|1443966_1444977_+\|portal	phage portal protein	Q19UT6	Mannheimia_phage	2.8e-117	60.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage