CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP031243	Haemophilus haemolyticus strain M19346 chromosome, complete genome	2 crisprs	cas3,DEDDh,WYL,DinG	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP031243_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031243_1

1033893-1034041

Orphan

Consensus_repeat	Method
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP031243_1

>merge|NZ_CP031243|1|1033893-1034041|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCAATAATACTTTTATAATGTGAAATTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

>NZ_CP031243|1|1|1033893-1034041|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CGTGCTCTACCAACTGAGCTATTCCCGCAATAATACTTTTATAATGTGAAA
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031243.1\|WP_114908904.1\|1020630_1021503_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
NZ_CP031243.1\|WP_032826506.1\|1024034_1024388_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|225654
NZ_CP031243.1\|WP_114908910.1\|1030182_1032546_+\|YadA-like-family-protein	unknown	unknown	gnl\|CDD\|240612
NZ_CP031243.1\|WP_005632589.1\|1041527_1042295_-\|TOBE-domain-containing-protein	unknown	unknown	gnl\|CDD\|182640
NZ_CP031243.1\|WP_114908906.1\|1024870_1025677_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP031243.1\|WP_114908915.1\|1038108_1038609_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|181859
NZ_CP031243.1\|WP_114908907.1\|1025838_1026369_-\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP031243.1\|WP_005632591.1\|1040982_1041438_+\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501
NZ_CP031243.1\|WP_005632606.1\|1024389_1024734_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
NZ_CP031243.1\|WP_114909579.1\|1034780_1035821_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237039
NZ_CP031243.1\|WP_114908913.1\|1035984_1036242_+\|phosphocarrier-protein-Hpr	unknown	unknown	gnl\|CDD\|182777
NZ_CP031243.1\|WP_114908916.1\|1038702_1039902_+\|mannose-6-phosphate-isomerase,-class-I	unknown	unknown	gnl\|CDD\|380414
NZ_CP031243.1\|WP_114908909.1\|1029862_1030048_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379020
NZ_CP031243.1\|WP_114908917.1\|1039981_1040899_+\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP031243.1\|WP_114908918.1\|1042432_1043197_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP031243.1\|WP_114908914.1\|1036320_1038048_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	unknown	unknown	gnl\|CDD\|183017
NZ_CP031243.1\|WP_114908912.1\|1034162_1034711_-\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
NZ_CP031243.1\|WP_114908905.1\|1021670_1024028_-\|penicillin-binding-protein-1B	unknown	unknown	gnl\|CDD\|273952
NZ_CP031243.1\|WP_114908908.1\|1027000_1029592_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	unknown	unknown	gnl\|CDD\|234980
NZ_CP031243.1\|WP_114908911.1\|1032698_1033766_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	unknown	unknown	gnl\|CDD\|131433

Protein	Function_ID	Function_description	E-value
NZ_CP031243.1\|WP_114908904.1\|1020630_1021503_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
NZ_CP031243.1\|WP_032826506.1\|1024034_1024388_-\|YacL-family-protein	gnl\|CDD\|225654	COG3112, COG3112, Uncharacterized protein conserved in bacteria [Function unknown].	3.37224e-56
NZ_CP031243.1\|WP_114908910.1\|1030182_1032546_+\|YadA-like-family-protein	gnl\|CDD\|240612	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll. This group contains the collagen-binding domain virulence factor YadA an adhesion proteins of several Yersinia species, and related cell surface proteins, including Moraxella catarrhalis UspA-like proteins. The collagen-binding portion is found in the hydrophobic N-terminal region. YadA forms a matrix on the bacterial outer membrane, which mediates binding to collagen and epithelial cells. YadA inhibits the complement-activating pathway with the coating of the cell surface with factor H, which impedes C3b molecules. These domains form a left handed beta roll made up of a series of short repeated elements. UspA1 and UspA2 are part of a class of pathogenicity factors that act as cell surface adhesion molecules, in which N-terminal head and neck domains extend from the bacterial outer membrane. The UspA1 head domain of Moraxella catarrhalis, is formed from trimeric left-handed parallel beta-helices of 14-16 amino acid repeats. The UspA1 head domain connects to a neck region of large extended, charged loops that maybe be ligand binding, which is in turn connected to an extended coiled coil domain that tethers the head and neck region to the cell surface via a transmembrane region.	6.63068e-19
NZ_CP031243.1\|WP_005632589.1\|1041527_1042295_-\|TOBE-domain-containing-protein	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	1.83658e-82
NZ_CP031243.1\|WP_114908906.1\|1024870_1025677_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	7.70723e-160
NZ_CP031243.1\|WP_114908915.1\|1038108_1038609_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|181859	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional.	1.18573e-103
NZ_CP031243.1\|WP_114908907.1\|1025838_1026369_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.84994e-29
NZ_CP031243.1\|WP_005632591.1\|1040982_1041438_+\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	1.1187e-28
NZ_CP031243.1\|WP_005632606.1\|1024389_1024734_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	1.53324e-81
NZ_CP031243.1\|WP_114909579.1\|1034780_1035821_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
NZ_CP031243.1\|WP_114908913.1\|1035984_1036242_+\|phosphocarrier-protein-Hpr	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	2.7026e-39
NZ_CP031243.1\|WP_114908916.1\|1038702_1039902_+\|mannose-6-phosphate-isomerase,-class-I	gnl\|CDD\|380414	cd07011, cupin_PMI_type_I_N, type I phosphomannose isomerase in eukaryotes and bacteria, N-terminal cupin domain. This subfamily contains type I phosphomannose isomerase (PMI; E.C. 5.3.1.8; also known as mannose-6-phosphate isomerase) found in eukaryotes and some bacteria such as Salmonella enterica. PMI catalyzes the reversible isomerization of fructose-6-phosphate (F6P) and mannose-6-phosphate (M6P), the first committed step in the synthesis of mannosylated glycoproteins. The active site, located within the N-terminal jelly roll-like beta-barrel cupin fold, contains a single essential zinc atom and forms a deep, open cavity large enough to contain M6P or F6P. PMI type I also has a C-terminal beta-barrel fold which has diverged considerably from the N-terminal domain and is not included here. This subfamily contains an alpha helical domain that is found in eukaryotic and some prokaryotic PMIs but is not present in their archaeal counterparts. F6P is a substrate for glycolysis and gluconeogenesis, while M6P is a substrate for production of activated mannose donor guanosine 5'-diphosphate D-mannose, an important precursor of mannosylated biomolecules such as glycoproteins, bacterial exopolysaccharides and fungal cell wall components. PMI is also essential for survival, virulence and possibly pathogenicity of some bacteria and protozoan parasites, as well as for cell wall integrity of certain yeasts. Thus, PMI is a potential target against fungal infections causing serious illness or death.	3.2883e-87
NZ_CP031243.1\|WP_114908909.1\|1029862_1030048_+\|hypothetical-protein	gnl\|CDD\|379020	pfam13018, ESPR, Extended Signal Peptide of Type V secretion system. This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.	3.61204e-10
NZ_CP031243.1\|WP_114908917.1\|1039981_1040899_+\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	6.07044e-77
NZ_CP031243.1\|WP_114908918.1\|1042432_1043197_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	7.3248e-100
NZ_CP031243.1\|WP_114908914.1\|1036320_1038048_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	gnl\|CDD\|183017	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI.	0
NZ_CP031243.1\|WP_114908912.1\|1034162_1034711_-\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	3.56081e-134
NZ_CP031243.1\|WP_114908905.1\|1021670_1024028_-\|penicillin-binding-protein-1B	gnl\|CDD\|273952	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP031243.1\|WP_114908908.1\|1027000_1029592_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	gnl\|CDD\|234980	PRK01759, glnD, bifunctional uridylyltransferase/uridylyl-removing protein GlnD.	0
NZ_CP031243.1\|WP_114908911.1\|1032698_1033766_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	gnl\|CDD\|131433	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. Members of this family are the WecA enzyme of enterobacterial common antigen biosynthesis, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. This family represents one narrow clade, and closely related sequences outside this clade may represent enzymes that catalyze the same specific reaction, but in the context of different pathways. A His-rich motif in a cytosolic loop of this integral membrane protein, shown critical to enzymatic activity for WecA is variously present or absent in the clade that includes Bacillus subtilis TagO teichoic acid biosynthesis enzyme, which may catalyze the same reaction as WecA. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0

>NZ_CP031243.1|WP_114908911.1|1032698_1033766_+|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase
MLSIFVTFLGAFLTLIVMRPVANWIGLVDKPNYRKRHQGAIPLIGGVSLFVGNLCYYLMEWEQLRLPYLYLFSIFVLLAIGILDDRFDISPFLRAGIQAILAILMIDLGNVYLDHLGQILGPFQLTLGSIGLIITVFATIAIINAFNMIDGIDGLLGGLSCVSFAAIGFLMYRDGQMDMAHWSFALIVSILPYLMLNLGIPFGSKYKVFMGDAGSTLIGFTIIWILLLSTQGKGHPMNPVTALWIIAIPLIDMVAIIYRRVRKGKSPFRPDRLHVHHLMVRAGLTSRQAFLLITFVSAVCATIGILGEVYYVNEWAMFVGFFILFFLYVYSITRAWRITRWVRRMKRRAKRLKKA
>NZ_CP031243.1|WP_114908910.1|1030182_1032546_+|YadA-like-family-protein
MNIDSSDTNYNNSGATGTYSVALGKSANSKNTGGVAIGWNAVSNANYSLAIGAYTKALGGNSIALGVLTNASGNNGIALGAGAKSLGNSAISIGTNSNSSLSATNGISIGTHAQSAEEHTIALGTLSKALGVQTLAFGFESSANGQASVAIGSKNKINSKNSLVAGTESEITDYANSSIALGVSAYVGKSKKANSNAYIDGRGTIIDSDQSETGTPGSTRAVAKDYAQMNVEPTRKYFSSVAIGNSAKALGYQTLAIGGTAEASATNSMALGIAAEARGHFSNALGKQAIAYKNNAIALGYYSSARSESSIALGDNSTVQTESGIALGSNSFNERGIGAIGYDFSEKNTKHTNSENKIANGQLLGTMKTEYDQLTTAITPLETDFNDTEKAYYKLVEQRDVEFNLKKQQEKVNELTTQLTALKAQSSPKQDEITKVENEKTAAEEELTRLNEKNTALLAETNVQSDKLSDEIAAKETELETKKQALLAKKEERNKIVSVWQGTAGSLSIGNDKKGITRQIIGVAAGTEDTDAVNVAQLKTLATLPVSIYNGGGMINNAFKLGTALDGFALNNLSFSFGDGLKVEKKDVDGKQVLFVGLDREKIQNDATLKGEKGEQGESGPKGEQGPQGNQGERGPKGEKGDQGKSAYESWKELPANHGKSEAEFAEVLGGGASKAELQQLRTEHDSLKAQIRKDQQSIQQLDRNMQKMNKDLRAGIAGATAIAFLQGGNFAGESAVSVAVGTYKGEHALAVGYGRRLTNNKIEVKLGVSVNSRSDVNAGGSVGYHW
>NZ_CP031243.1|WP_114908909.1|1029862_1030048_+|hypothetical-protein
MNNIYKVVWNAGLQMFQVVSELAKGKSKSRRCKQQVSDASSACLPACLPACLPACLPACLS
>NZ_CP031243.1|WP_114908908.1|1027000_1029592_+|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD
MLFSPTLSFSLTPSAVKIERENLKQFELENFSRYSIFELIENRSNFYDALLIQLWQDMGLSELQGIALIAVGGYGRREMFPLSDLDFLILVKQIPSPEIEEKITQFIQFLWDCGFEVGNSVRTLAQCESEGKQDITIATNLLEARFLTGDRPHFDALNELVKNADFWSKEDFFNAKVQEQIERYQRYHNTAYNLEPDIKYSPGGLRDLHLLYWVALRHSGALTLEAILQSGFIYPQEYQQLQESRAFLFKVRFALHLILKRYDNRLLFDRQIKVSELLGFRGEGNQAVEKMMKCFFQALHRISLISNLLIQHYRENVLSSNQDSVIHQLDDDFQLINQCLCLRNSLVFQEKPERILDLFFYLTQYDQAKIHSDTLRQLQISLDQLPQKLCEIPAAREKFLRLFNQSNAIKRAFMPMHQYGVLTAYLSRWQAIEGLMQFDLFHIYTVDEHTLRVMLKLESFLSQESAQEHPIAHRIFSQLSDRTLLYIAALFHDIAKGRGGDHAELGAVDVADFAQLHGLDRREIDTLVWLVQSHLLMSITAQRRDIHDPEVVMNFAEAVQNQVRLDYLTCLTVADICATNSNLWNSWKRSLFASLYEFTEQQFAQGMKELLDYSEKSEENRKLAQQILTQDYLDIAPISIEQLWDRCPEDYFVRNTPKQIAWHTSLLVDFAEALLVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFTLQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALAREEREKLNSVIIQQIR
>NZ_CP031243.1|WP_114908907.1|1025838_1026369_-|transposase
MSRYRRMKVENGMYFITAVLQNRKANYLIRYIDEFRAAYKETQSHCPFETIALCILPNHFHLIMQLPENDMNFSKRIRLLKLNFTKRLPLECRQPTASHIKRREAGIWQRRFWEHLIRDDQDLVNHWDYIYYNPVKHGYVQAVKDWAYSSFHRDVKRDIFPEDWGGHPELMIKGEI
>NZ_CP031243.1|WP_114908906.1|1024870_1025677_+|type-I-methionyl-aminopeptidase
MAIPIRTEKEIVKLREACKLASDVLVMIEPYVKAGVTTGELDRICHEYMVNEQKVIPACLNYHGFPKATCISINEVVCHGIPSDDKVLKNGDIVNIDVTVIKDGYFGDNSKMYIVGGETNIRSKKLVEAAQEALYVGLRTVKPGIRLNEVGKAVQKYTESQTFSVVREYCGHGVGTEFHCEPQVLHYYADDGGVILKSGMVFTIEPMINAGKKEVRVMGDGWTVKTKDRSHSAQYEHQLVVTETGCEVMTIRDEEIAEGRISRIMVNV
>NZ_CP031243.1|WP_005632606.1|1024389_1024734_-|iron-sulfur-cluster-insertion-protein-ErpA
MTDNIAVPLTFTDAAANKVKSLISEEENTNLKLRVYITGGGCSGFQYGFTFDEKVNEGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
>NZ_CP031243.1|WP_032826506.1|1024034_1024388_-|YacL-family-protein
MDFQFTHYQGNVSVKCSMEHIALANWFNTEVRSNPKAILTALSTAQSLSENQEEILIGAEYTLFLDADEVMVRANNLAIETDEILEDDFHYYDEESIAFCGTQDFIHFLEAYVDFIS
>NZ_CP031243.1|WP_114908905.1|1021670_1024028_-|penicillin-binding-protein-1B
MTTENVQKNPEEKTPKKCRSFKSFLFKVAFTGAVLIVFYGGYLDWQIRSKMDGQIWRLPAEVYSRIESVKISDNLAFDEVIQILLDNEYRQTTMVAAPGDFKLEDDTIVVLRRAFPFPDKPEPQRVLRLRFVDNKLNRIEDLVAVKAIDEFRLAPKLIAMLESDNEDRLAIPLQNYPRLLIDALILTEDRRFYDHHGINPVGIIRALITNIRAGQTVQGGSTLTQQLVKNLFLSSERTITRKANEALMSLVLDWRYDKNRILETYLNEIYLGQNGDTQIHGFELASQFYFGRSIREISLDQIALLVGMVKGPSLYNPWRNPQNALERRNVVLKLMLEHKMIGDELYQLLSQRPLGVQQKGQISRKYPSFIQTLQADLRRELGEHKISSLLGARIFTTMDLKQQAQAENAVVNTVSQLQLKTKNPYLEGAMIVADYRVGEIRAVVGGLQTQYAGFNRALMAKRQIGSLVKPSIYLTALSNPEQFRLNTPINNQPITINVKGSPPWQPRNYDKKYSGSVMLMDALARSLNIPTVNIGMKVGLSKVIDTQKAMGWDNVEIPKVPAMLLGAYTISPYDVTKLYQTIANQGGRIELTTVDTIADRQGNIIYQHDKTAKQVVPQEAAFQTLFAMQQTVERGTARSLKNDYADLRLAGKTGTTNDARDTWFVGIDGKNISTVWLGRDDNGETKLTGASGALQIYKDYLSHTYIEKLKLNKPANMKWVGITQHGSWDCDSNRVIPVWVYNGQNFCGGTPNASPSPATPPAETEIAPRQESVWDVLDNPNPPAQ
>NZ_CP031243.1|WP_114908904.1|1020630_1021503_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MTQQLPILSLKKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPIPRKGEILTQISNFWFNKLAHIMPNHFTGESVYDVLPKEEADLVKDRAVVCKRLNPIKIESIVRGYLTGSGLKDYKQTGTICGLKLPEGLVEASKLPEAIFTPSSKEEVGNHDINISYAECEKLIGADLAAQVKEKAIALYTTAAEYALTKGIIICDTKFEFGLDENGTLTLMDEVLTPDSSRFWSIDTYQEGINPPSFDKQFVRDWLENSGWNKQAPAPKVPENIIQKTVDKYQEALDLLTK
>NZ_CP031243.1|WP_114908912.1|1034162_1034711_-|oligoribonuclease
MPFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGSSPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHFMKLD
>NZ_CP031243.1|WP_114909579.1|1034780_1035821_+|small-ribosomal-subunit-biogenesis-GTPase-RsgA
MAKRKLTQNQTRRIQSNNAKTLHRHKKKEIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKVVWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAANIDRIIIVSAVLPTLSLNIIDRYLVVCEIAGITPLIVLNKVDLLTQEQRQEIEEQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPTVNAQVGDVSETSGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLSDPGCALREAVEQGKISPVRYDNYHRLIESLSETKSQRHFSAV
>NZ_CP031243.1|WP_114908913.1|1035984_1036242_+|phosphocarrier-protein-Hpr
MYSKDVEITAPNGLHTRPAAQFVKEAKAFSSDITVISAGKSASAKSLFKLQTLGLTQGTVITISAEGEDEQQAVEHLVALIPTLE
>NZ_CP031243.1|WP_114908914.1|1036320_1038048_+|phosphoenolpyruvate-protein-phosphotransferase-PtsI
MISGILASPGIAFGKALVLKEEKIVLDTQKITDDQIDAEVARFYEGRALAVEQLNSIRERALISLGEEKAAIFEGHLMILEDEELEEEILDYLHSNKVNAAVAASKIIDQQVTMLSEIDDEYLKERAGDIRDIGNRLIKNILGMYIVDLGDIQEESILVAYDLTPSETAQLNLEKVLGVVTDIGGRTSHTSIMARSLELPAIVGTNNVTELVNTGDYLILDAINNQVYINPTQSQIDELKTLEAKISQGKAELAKLKDLPAITLDGHKVDVVANIGTIRDCEGADRNGAEGIGLYRTEFLFMDREQLPTEEEQFIAYKEVVEAMNGRLTVLRTMDIGGDKELPYLDLPKEMNPFLGWRAIRIALDRREILNAQLRAVLRASVFGKLAVMFPMIISVEEIRELKAVIETLKAELRAEGKAFDEHIQVGVMVETPSAAVNAKFLAKEVDFFSIGTNDLTQYTLAVDRGNELISHLYNPMQPSVLGLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISVPRIKKLIRNVNFQDAKALANAALQKPTASEIEQLIEEFLAENALN
>NZ_CP031243.1|WP_114908915.1|1038108_1038609_+|PTS-glucose-transporter-subunit-IIA
MGLFDKLFGSKENKSVEVEIYAPISGDIVNIEDVPDVVFSEKIVGDGVAIRPTGNKIVAPVDGVIGKIFETNHAFSMESKEGVELFVHFGIDTVELKGEGFTRIAQEGQSVKRGDTVIEFDLPLLESKAKSVLTPIVISNMDEISCIVKKSGEVVAGESVVLSLTK
>NZ_CP031243.1|WP_114908916.1|1038702_1039902_+|mannose-6-phosphate-isomerase,-class-I
MIYKLTGSLQNYVWGGHQYIPQLLNIPAEENQYYAEWWLGAHHSAPSSIEVDGKNVLLTEFLQKNPTALGAQSRVSFGDELPYLLKILDVAQPLSIQLHPTKTQAEIGFAEENAKGIELKASTRTYKDNNHKPEMMIALSDFWLLHGFKNKSDIIETLEARSSLVPLAKKLHEQDLHAFYADIMQVEQAQLHQWLSPILLENQVAYEANNLDLTNPDYWVLYTIDAMNISLDKLDAGLICFYLFNIVHLKKGEGIYQDAGIPHAYLRGQNIELMACSDNVIRGGLTPKYVDIPELLKIVDCREVEPKIIPLAPQDARIFTYATPAKDFALQNIQYECGETHHLKAQSASILLVMNGQLNLRSETTALSLKQGKAAFITANASYEVEGLIEGYAVVAKLP
>NZ_CP031243.1|WP_114908917.1|1039981_1040899_+|SPFH/Band-7/PHB-domain-protein
MLDGFAISTLIFVILVALILFSTVKTVPQGYNWTIERFGRYTRTLIPGLNLVVPFVDRIGRKINMMEQVLDIPSQEVISKDNANVSIDAVCFVQVIDARSAAYEVNHLEQAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLAIVDEATNPWGIKVTRIEIRDVRPPRELIDSMNAQMKAERNKRAEVLEAEGIRQAQILRAEGEKQARILKAEGERQEAFLQAEARERAAEAEAKATQMVSEAITSGDTKAINYFIAQKYTEALKEIGSSGNSKVVLMPLEAGNLIGSVAGIAELLKGDKKS
>NZ_CP031243.1|WP_005632591.1|1040982_1041438_+|NfeD-family-protein
MADWLINWTLWHWLILGFILLIGEVLTPGIFLLWWGLAALVTAFVQFLFPSLSLASLAIFYALLACILSVIWWKYQHGKDRHDQSHSTLNQRDHALLGKQGIVQDLGANGIGRGAFGDTTWRIQGDNLTVGALIEVERVDGITLIVKNLSN
>NZ_CP031243.1|WP_005632589.1|1041527_1042295_-|TOBE-domain-containing-protein
MKNTEILLTIKLQQALFIDPKRVRLLKEIQQCGSINQAAKNAKVSYKSAWDHLEAMNKISPRPLLERNTGGKNGGGTALTTYAERLLQLYDLLERTQEHAFHILQDESVPLDSLLTATARFSLQSSARNQFFGRVAQQRIIDARCVVDVNVQGLPTPLQVSITTKSSAHLKLITEKEVMLMFKAPWVKISEKPLENQSNQFPVNIKSLNEEEAILQFAESDIEFCATVHQPHQWQIGQQVWIHIDQEQIILATLG
>NZ_CP031243.1|WP_114908918.1|1042432_1043197_+|molybdate-ABC-transporter-substrate-binding-protein
MKKLTKISTALLIAGLGFSFVASAKVTVFAAASMTDALQQVAKDYAKQNPKNEVVFSFASSSTLAKQIEEGAPADIFVSASNKWMKYLSEKDLTVKETEKVLVGNDLVLIAPAKSAVNSVDIAKGEWINTLKDSYLSVGDPAHVPAGQYAEEALTKLNLWDKVQDRLARAKDVRGALALVERAEAPYGIVYSTDAKVSQQVKTVAVFPSDSHKPVVYPVSIVKGHDNADSRDFLKYLESDAAKKVLVEYGFSAK

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Crispr_ID: NZ_CP031243_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031243_2

1944041-1944167

Orphan

Consensus_repeat	Method
CCAATATATTCAGGTTTATCTATTA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP031243_2

>merge|NZ_CP031243|2|1944041-1944167|CRISPRCasFinder
TCAACATATTTCGTTTTATTTGTTACTGGTAAATCCCCGGAGTTAACACCAATATATTCAGGTTTATCTATTACTGGTACTAGTGCATCGCTAGGAACAATGCCAATATATTCAGGTTTATCTATTA

>NZ_CP031243|2|2|1944041-1944167|CRISPRCasFinder
TCAACATATTTCGTTTTATTTGTTA	CTGGTAAATCCCCGGAGTTAACA
CCAATATATTCAGGTTTATCTATTA	CTGGTACTAGTGCATCGCTAGGAACAATG
CCAATATATTCAGGTTTATCTATTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031243.1\|WP_114909545.1\|1950562_1952005_-\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP031243.1\|WP_114909548.1\|1955245_1955728_-\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|179332
NZ_CP031243.1\|WP_114909543.1\|1946203_1947763_-\|phosphoethanolamine-transferase	unknown	unknown	gnl\|CDD\|225105
NZ_CP031243.1\|WP_114909540.1\|1941884_1943057_-\|lipid-A-disaccharide-synthase	unknown	unknown	gnl\|CDD\|234580
NZ_CP031243.1\|WP_114909547.1\|1954451_1955249_-\|virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|179313
NZ_CP031243.1\|WP_114909535.1\|1934337_1935342_+\|outer-membrane-protein-assembly-factor-BamC	unknown	unknown	gnl\|CDD\|225854
NZ_CP031243.1\|WP_114909539.1\|1939831_1940728_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380399
NZ_CP031243.1\|WP_114909544.1\|1948671_1950198_-\|catalase	unknown	unknown	gnl\|CDD\|163712
NZ_CP031243.1\|WP_114909537.1\|1937230_1937818_+\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP031243.1\|WP_114909605.1\|1935373_1936417_-\|glycosyltransferase-family-9-protein	unknown	unknown	gnl\|CDD\|366450
NZ_CP031243.1\|WP_005627672.1\|1940839_1941181_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP031243.1\|WP_114909534.1\|1933342_1934239_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP031243.1\|WP_114909546.1\|1952752_1954408_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
NZ_CP031243.1\|WP_114909542.1\|1944868_1945657_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	unknown	unknown	gnl\|CDD\|235390
NZ_CP031243.1\|WP_114909549.1\|1955730_1956393_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP031243.1\|WP_044233196.1\|1945671_1946076_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP031243.1\|WP_005632888.1\|1941298_1941892_-\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|234574
NZ_CP031243.1\|WP_105878974.1\|1947893_1948607_+\|UMP-kinase	unknown	unknown	gnl\|CDD\|213681
NZ_CP031243.1\|WP_114909538.1\|1937908_1939753_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP031243.1\|WP_114909536.1\|1936493_1937219_+\|3-deoxy-D-manno-octulosonic-acid-kinase	unknown	unknown	gnl\|CDD\|234975

Protein	Function_ID	Function_description	E-value
NZ_CP031243.1\|WP_114909545.1\|1950562_1952005_-\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP031243.1\|WP_114909548.1\|1955245_1955728_-\|YchJ-family-protein	gnl\|CDD\|179332	PRK01752, PRK01752, YchJ family protein.	2.57173e-104
NZ_CP031243.1\|WP_114909543.1\|1946203_1947763_-\|phosphoethanolamine-transferase	gnl\|CDD\|225105	COG2194, COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only].	3.95441e-92
NZ_CP031243.1\|WP_114909540.1\|1941884_1943057_-\|lipid-A-disaccharide-synthase	gnl\|CDD\|234580	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed.	0
NZ_CP031243.1\|WP_114909547.1\|1954451_1955249_-\|virulence-factor-BrkB-family-protein	gnl\|CDD\|179313	PRK01637, PRK01637, virulence factor BrkB family protein.	1.79951e-143
NZ_CP031243.1\|WP_114909535.1\|1934337_1935342_+\|outer-membrane-protein-assembly-factor-BamC	gnl\|CDD\|225854	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane].	3.47496e-98
NZ_CP031243.1\|WP_114909539.1\|1939831_1940728_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|380399	cd06995, cupin_YkgD-like_N, AraC/XylS family transcriptional regulators similar to Escherichia coli YkgD, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is YkgD, an uncharacterized Escherichia coli protein thought to be a transcriptional regulator. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.322e-45
NZ_CP031243.1\|WP_114909544.1\|1948671_1950198_-\|catalase	gnl\|CDD\|163712	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.	0
NZ_CP031243.1\|WP_114909537.1\|1937230_1937818_+\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	6.496e-116
NZ_CP031243.1\|WP_114909605.1\|1935373_1936417_-\|glycosyltransferase-family-9-protein	gnl\|CDD\|366450	pfam01075, Glyco_transf_9, Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.	8.63555e-100
NZ_CP031243.1\|WP_005627672.1\|1940839_1941181_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	8.1075e-20
NZ_CP031243.1\|WP_114909534.1\|1933342_1934239_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.03344e-176
NZ_CP031243.1\|WP_114909546.1\|1952752_1954408_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	1.75598e-91
NZ_CP031243.1\|WP_114909542.1\|1944868_1945657_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	gnl\|CDD\|235390	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase.	1.91145e-159
NZ_CP031243.1\|WP_114909549.1\|1955730_1956393_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	5.63704e-80
NZ_CP031243.1\|WP_044233196.1\|1945671_1946076_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	2.45209e-85
NZ_CP031243.1\|WP_005632888.1\|1941298_1941892_-\|ribonuclease-HII	gnl\|CDD\|234574	PRK00015, rnhB, ribonuclease HII; Validated.	1.22666e-113
NZ_CP031243.1\|WP_105878974.1\|1947893_1948607_+\|UMP-kinase	gnl\|CDD\|213681	TIGR02075, Uridylate_kinase, uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions].	2.25061e-144
NZ_CP031243.1\|WP_114909538.1\|1937908_1939753_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.47465e-155
NZ_CP031243.1\|WP_114909536.1\|1936493_1937219_+\|3-deoxy-D-manno-octulosonic-acid-kinase	gnl\|CDD\|234975	PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed.	4.05043e-129

>NZ_CP031243.1|WP_114909540.1|1941884_1943057_-|lipid-A-disaccharide-synthase
MNRISPTIALVAGEVSGDILGAGLIRQLKAHYPNARFIGIAGPRMLAEGCETLVDMEELSVMGLAEILKHLPRLLKIRKNVIQTMLQEKPDVYIGIDAPDFNLDVELKLKANGIKTIHYVSPSVWAWRQNRIHKIAKATHQVLAFLPFEKAFYDKFNVPCRFIGHTMADAIPLKPNRAEACQMLQIDPAQRYLAILVGSRGSEVEFLAEPFLKTALLLKKQFPDLQFLVPLVNEKRRIQFEAIKTKIAPNLDMHLIDGNARQAMIAADATLLASGTAALEAMLCKSPMVVGYRMKPLTYFLAKRLVKTDYISLPNLLANEMLVPEMIQEECTPELLAEKLSAYLSDDESAVKNRHVLIQHFTDLHQKIQCNADKQAAQAVIDLLEGTENV
>NZ_CP031243.1|WP_005632888.1|1941298_1941892_-|ribonuclease-HII
MFEYPQGYELIAGVDEVGRGPLVGAVVTAAVILDPNNPIEGLADSKKLSEKKRLALAEEIKEKALAWALGRAEANEIDEINILQASLLAMTRAVKSLKIQPHFVLVDGNKIPKDLDIPAQAVVKGDSLVAEISAASILAKVARDQEMEELDKQYPEYAFAQHKGYPTKLHLEKLAELGALPQHRRSFAPVKKALENR
>NZ_CP031243.1|WP_005627672.1|1940839_1941181_+|carboxymuconolactone-decarboxylase-family-protein
MFADWKEETSHVKKSFGALGKQYPKMLQAYQALGAAAAEGNVLDAKTRELIALAVAVTTRCESCISVHAEEAVKAGASEAEVAAALAMSIALNAGAAYTYSLRALEAYNVQKG
>NZ_CP031243.1|WP_114909539.1|1939831_1940728_-|AraC-family-transcriptional-regulator
MDYLDKLTHLAQVRGEINIRCEFQGEWQVAHQEKDVGKGVFHLIEQGECWLTLGQKQFHLKEGDIFFLPQNQPHFMRHSSNQTKDASLKKSWKGAFELHQVGQGTPDLKMFCGAFYYQQDALLTASMPEYLHLNLCDTPIHPLVQLFLQEAQKNDVGTKSVVDALSNVLLIYILRHAIQENLITGGVLLALQDKRLNAVLGAILQRPQEDWRIEQLADLSAMSRANFIRVFQQQLGMSPGRFITQVRLQSAAFLLKQSQQSVLAIALEVGYQSEAHFSKAFKNYYQLSPSQYRKSASL
>NZ_CP031243.1|WP_114909538.1|1937908_1939753_-|ABC-transporter-ATP-binding-protein
MFNKIFSWFENRLNPYPEGNPTTPKKGLLRFIWSSIEGMKGWILLLTVLTVGTGVMEAVLFQFMGTLVDWLGTFTPEALWQEKGHLLIGMAALLLVSIVWGFLASTVRLQTLQGVFPMRLRWNFHRLMLGQSLSFYQDEFAGRVSAKVMQTALAVRDTVLTLADMFVYVIVYFITSGLVLAALDSWFLLPFIAWITIFVFILRTLIPKLSKTAQRQADARSLMTGRITDAYSNIATVKLFSHGSREAAYAKRSMEDFMVTVHAQMRLATSLDTLTYAANILLTLSTAVLGIILWKNGQVGVGAIATATAMALRVNGLSRWIMWESARLFENIGTVNDGMNTLTKPHTIVDKPQASPLQVTQGEIKFNDITFAYNPTKPLLNHFNLTIKPGEKVGLIGRSGAGKSTIVNLLLRFYEAQQGAITIDGQNVLDVQQESLRRQIGLVTQDTSLLHRSVRDNIIYGRPNATDEEMILAAERAEADDFIPFLTDAQGRKGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQESLDKMMENKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHAELLERNGLYAKLWNHQSGGFLSEHAE
>NZ_CP031243.1|WP_114909537.1|1937230_1937818_+|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase
MKQKIVLATGNKGKVKEMADVLSDFGFEVIAQTDLGIESPEETGLTFVENALLKARYASEKSGLPAIADDSGLVVSALNGAPGLYSARYAGEEGNDAKNREKLLAELAHVAQDKRQAKFVSCIVFLQHPTDPSPIIAEGECHGVIGFEEKGENGFGYDSLFFSPEQGCTFAELETVEKKKISHRARALTVLKSKL
>NZ_CP031243.1|WP_114909536.1|1936493_1937219_+|3-deoxy-D-manno-octulosonic-acid-kinase
MHQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGTTYFLQTEDWFGVNCALRHYYRGGLWGKLNKDRYRFSALETTRSFSEFHLLQRLYEAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKETWMQIGRLIRKLHDSQICHTDLNAHNILLQQTEQEQKCWLLDFDKCGEKSGDFWKEQNLNRLKRSFEKEVGRMNIQFTEQNWADLTTAYHQ
>NZ_CP031243.1|WP_114909605.1|1935373_1936417_-|glycosyltransferase-family-9-protein
MPLFTEAPKSLCILRLSAVGDVCHALAVVQHIQAYYPQTEITWVVGKTEMGLLSGIPNVTLIPYDKKAGWKGVLSLWKQLKNKQFDALLNMQTAFRASILSLGIKAKFKIGFGEKRSREGQWLFVNRRIRDPFSPHVLDGFMAFAEYIGVPKTEPKWELAISQDDYKFADQFIDFSRKNLLISPCSSKAEKDWLIERYAEVANIAHQHNVNVIFCSSPAKRELEIVEKITALCHFTPTNIAGKTNLKQLTALISKVDLVLSPDSGPAHIATTQGTPVIGLYAYHNPLRTAPYNNLDNVVSVYEENAQKEFGKPSSELPWATKLKGKNLMAEIQVEPVIEQMKKLGLF
>NZ_CP031243.1|WP_114909535.1|1934337_1935342_+|outer-membrane-protein-assembly-factor-BamC
MKKIMLSLAAVIVLAGCSSDPEALKTANDSFQKSEASIPGFSPLASGGVMLPKADDTYALPNIAVKKGENIDIRPPSTPLAIIENSLTQFDGERALIVYPEQQASVYNLQQVERLLKEDGISSTTNGAILTTDWAPTGRIGDKSGTEIKYQVEQVMAQDASALAVSVLQMRRDGVIFTPSVSDKQRYTSERLNRIVSALTSAYNKQQQDLSSASVGAVASQVIQDLNGQAALAMNVNFGQAWEKLGGALPKVGFAIKSETAGKGYRELKYSALNKEDWLRMGAELPELENGTYQMQISDHGRQSSVVISDEKGKALSGDSAVRIYQAISNLIAR
>NZ_CP031243.1|WP_114909534.1|1933342_1934239_+|4-hydroxy-tetrahydrodipicolinate-synthase
MSAQNPLFSGSIVALVTPMNNYGEVDFACLEKLVEYHIEAGSNALVSVGTTGESATLSIEENVKVIEKTVEFAKGRIPVIAGAGANATSEAITMTKLLRDSGVAGCLSVVPYYNKPTQEGIFQHFKAIAECTDLPQILYNVPGRTGSDMKPETVARLSKINNIVGIKEATGDISRVTKIKELAGKDFIVLSGDDATSLDAMKLGAEGVISVTNNLAPKDMADMCRYALAGDFAKAEAINARLMRLHHDLFIESNPIPVKWAAYRLGLIKSAHLRLPLTVLSEEVQPKVEEALKIAGLL
>NZ_CP031243.1|WP_114909542.1|1944868_1945657_-|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase
MIHPNAKIHPTALVEEGAVIGESVIIGPFCIVEGSVEIKARTVLKSHVVVRGDTVIGEDNEIYQFASIGEVNQDLKYKGEATKTIIGNGNRIREHVTIHRGTIQGGGVTAIGNNNLLMVNVHVAHDCQIKNNCILANNATLAGHVELDDFVIVGGMSAIHQFVIVGAHVMLGGGSMVSQDVPPYVMAQGNHARPFGVNLEGLKRRGFDKPTMHAIRNVYKMIYRSGKTLEEVLPEIEQIAETDSAISFFVEFFKRSTRGIIR
>NZ_CP031243.1|WP_044233196.1|1945671_1946076_-|3-hydroxyacyl-ACP-dehydratase-FabZ
MTLLPHRYPFLLVDRVLDFKEGEWLKAIKNISVNEPCFTGHFPGEPILPGVLILEALAQAMGILAFKTHELKGGELFYFAGIDEARFKRPVLPGDQMELNVQVIKERRGITAFTGVATVNGEIACEAKLMCARR
>NZ_CP031243.1|WP_114909543.1|1946203_1947763_-|phosphoethanolamine-transferase
MNTKKTSQILPALFAVICAALAGYFILIGSGMFTEPSVVLILLATTTILLLSSSKKSFYFILLPLALLHAFYTPTGLNFGPPSYQYIASLFATDMLETKEFLLQIPVSSYLIAFAIPIFIFLQYKSAVKSGIKFYRNKTFIALATLLFTYNMPLAEPIKETVSSTLKIVDEVQKLKQMSQSDNWGKSTLENSRYDDYVIVLGESARKDYHHAYGYPIENTPFMSSTKGTLIDGFRSAGTNTVASLRLMLTLPNKEKWEPNYSLSLVDLIKSAGVKTYWLSNQGMLGEFDTPVSSLASKSDVTFFLKKGGSFNSTNFSDFDLLPKFTQVLEDPVQGKRFIVLHIYGSHPMACDRVEDYPKIFDDNDLNPRYGYLNCYVSSIKKTDEFLKRVYEQLEENAKKNHRTFSMIYFSDHGLCHQQDEKNNILLFNQNCFSREHHNIPLFKISSDDTERKEYKVFKSGLNFLEGIANWIGIKNPQLTQTEDLFSNESDKNDFGLQKRIDEKYRKDDDPAIDIRPKH
>NZ_CP031243.1|WP_105878974.1|1947893_1948607_+|UMP-kinase
MSQPIYKRILLKLSGEALQGEDGFGIDPAILDRMAVEIKELVEMGVEVGVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGSPFFTTDSAACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLTYAEVIDKELQVMDLAAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTIC
>NZ_CP031243.1|WP_114909544.1|1948671_1950198_-|catalase
MSSQCPFSHLSSTNLTMGNGAPVADNQNSLTAGPRGPLLSQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFWTLLPEALHQVTVVMSDRGIPASYRHMHGYGSHTYSFWNEAGERFWVKFHFHTQQGIKNLTDAEAAEVIANDRESHQRDLYEAIERGDFPKWTLFVQIMPEADAEKVPYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDRMLQARLFNYADAQRYRLGVNYRQIPVNRPRCPVHSNQRDGQGRVDGNYGSLPHYEPNSFSQWQQQPDFAEPPLRINGDAAHWDFRNDDNDYFSQPRALFNLMNPEQKQALFNNTAAAMGDAPEFIKYRHIRNCHWCDPAYGEGVAKALGLTVENALKARETDPALGQGGLL
>NZ_CP031243.1|WP_114909545.1|1950562_1952005_-|glutamate--tRNA-ligase
MKLDAPFNLDPNVKVRTRFAPSPTGYLHVGGARTALYSWLYAKHNSGEFVLRIEDTDLERSTPEATAAIIEGMEWLNLPWEHGPYYQTKRFDRYNQVIDEMIEQGLAYRCYCTKDRLEELRHTQEQNKEKPRYDRHCLHDHNHSPDEPHVVRFKNPTEGSVVFDDAVRGRIEISNGELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNTPRQINILKAIGAPIPTYAHVSMINGDDGQKLSKRHGAVSVMQYRDDGYLPEALINYLVRLGWGHGDQEIFSREEMIKYFELDHVSKSASAFNTEKLQWLNQHYIRELPPEYVAKHLEWHYKDQGIDTTNGPALTEIVTMLAERCKTLKEMASSSRYFFEEFETFDEAAAKKHFKGNAAEALAKVKEKLTALSSWDLHSTHEAIEQTAAELEVGMGKVGMPLRVAVTGSGQSPSMDVTLVGIGRDRVLARIQRAIDFINAQNA
>NZ_CP031243.1|WP_114909546.1|1952752_1954408_+|LTA-synthase-family-protein
MIAYIFLALFTIAAVIFIVNSHYRWTYFFAITLFTFLFGGMLMVSGQWQRALNFSSVLFVVLMLFHRLKIHYYKQPLLISDFFLVVDWRNWETLIHYKGALLGVIGLLALLGYAIFGFNDVESLGGLGNSMGALLFIVSFSLMWHYSKKPSAVQVWLDSLPDDGRDVFLNLPMSCRGIFFKVPNFDGNSQNFIEKMTALPSDTNSISETKPDIVVTLMESTLNPHQFAFSQQSIPPLSMFEPQNDTVFASPLRVHTFAGATWKSEFAFLAGVPSTDFGALASGVFYSVVPHLQSGLVKNLKAQGYFCVALSPFTKGNYNAKSAYDHFGFDLMLQPQDLGYPAPISKNLWDISSEEMMKYTRMILEKQHPALENVDQPMFVYVLTMREHGPYELGMENKFNLQMPNLGAKSISALNDYTQRIVALNEAIEGMNNYLHERKKPFVLGYFGDHQVAFDNVIPPKKGDYAQPDYVTQFVVRSNCASQFKQEQLFLDLAFAGGVLMNVAGLSAEDEFMKANMAMCKLSNGKLEDSSNPAFVNDYRHYLYQTLKIAK
>NZ_CP031243.1|WP_114909547.1|1954451_1955249_-|virulence-factor-BrkB-family-protein
MISLKQFSLLFWKRFSENKLNQAAGALTYSTMLAIVPMVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPSASDMVGEYIDQFVLNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHDTSIRPIFTSFAIYWMILTFGPLVIGISIGISSYIKVMFEQSETLSLGVKLLSLLPFFFTWFIFTLIYTIVPNKKVDIRYSACGALIAAIFFTLGKQAFTWYITTFPSYQLIYGAMATLPIMLLWIQISWLVVLVGAQLSEVLGELKE
>NZ_CP031243.1|WP_114909548.1|1955245_1955728_-|YchJ-family-protein
MSEISTALSEDCPCQSGHQYADCCGKFHLRQSFPETAEQLMRSRYTAYVLKNIPYIVATTVPSQQTLLEIHLLQEWADNTTWLGLEVLKTENLTKTQSAVEFKAIFQGEEGELTHQERSIFVKIENRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL
>NZ_CP031243.1|WP_114909549.1|1955730_1956393_-|MOSC-domain-containing-protein
MNAKILVIKVGEVQTLTFSDGSQYESAIRKKVVPSVKIHSLGAEGNDVGLKKHHGGVDKSLFFMSADSFNELNALLNKNFSYMETATYGENFVVSGLNEDNVCIGDRYQIGSTILEVSQPRKPCERLSKNTENEETRDIVYQTGLSGWYVRVIETGEIRQGDELKLLARPYPQVTIRHLNRLLSAPENEAELEAALDIEVLAEAFKRSIRSQVSKFKQQG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

433922 : 540519

114

Mannheimia_phage(40.91%)

protease,holin,capsid,tail,integrase,portal,plate,tRNA,terminase,head

attL 478599:478649|attR 512489:512539

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114908523.1\|433922_434951_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.8e-110	57.7
WP_114908524.1\|434959_435541_+	thymidine kinase	M9UV85	Escherichia_phage	3.6e-53	52.9
WP_114908525.1\|435577_436798_+	tyrosine transporter	NA	NA	NA	NA
WP_005627640.1\|436943_437204_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	9.0e-20	57.8
WP_114908526.1\|437281_438064_+	ribonuclease HI	NA	NA	NA	NA
WP_114908527.1\|438159_439320_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_114908528.1\|439440_440520_+	class II fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_114908529.1\|440587_441628_+	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_053466122.1\|441841_443386_+	YjjI family glycine radical enzyme	NA	NA	NA	NA
WP_114908530.1\|443394_444183_+	4Fe-4S cluster-binding domain-containing protein	NA	NA	NA	NA
WP_114908531.1\|444286_445540_+	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
WP_114908532.1\|445609_446326_+	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_005633053.1\|446498_446927_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_005627655.1\|446931_447621_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_114908533.1\|448003_452032_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	1.0e-21	25.7
WP_114908534.1\|452157_456408_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	2.0e-68	26.9
WP_162790761.1\|456601_457546_+	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_114908535.1\|457598_458318_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_114908536.1\|458379_459291_+	1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA	NA	NA	NA
WP_005643947.1\|459342_459840_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_114908537.1\|459994_461380_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
WP_114908538.1\|461485_462334_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.8e-32	37.7
WP_114908539.1\|462824_465596_+	RNA polymerase-associated protein RapA	A0A1B1IUI1	uncultured_Mediterranean_phage	2.5e-19	32.0
WP_114908540.1\|465598_466258_+\|tRNA	bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA	NA	NA	NA
WP_114908541.1\|466284_466863_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_114908542.1\|466892_467645_+	DeoR/GlpR family transcriptional regulator	NA	NA	NA	NA
WP_114908543.1\|467772_468525_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_005630808.1\|468581_468971_+	RidA family protein	NA	NA	NA	NA
WP_162837812.1\|469135_469990_+\|protease	protease HtpX	NA	NA	NA	NA
WP_032828119.1\|470032_470272_-	sulfurtransferase TusA	A0A140XB86	Dickeya_phage	4.7e-07	66.7
WP_114908544.1\|470387_471008_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	5.0e-24	35.0
WP_114908545.1\|471010_472474_+	potassium transporter	NA	NA	NA	NA
478599:478649	attL	NA	NA	NA	NA
WP_114908546.1\|478661_479717_-\|integrase	site-specific integrase	K7PKD7	Enterobacteria_phage	1.3e-56	36.2
WP_114908547.1\|479955_480477_-	MazG-like family protein	A0A0M3LTD8	Mannheimia_phage	1.3e-28	42.4
WP_114908548.1\|480489_480699_-	hypothetical protein	NA	NA	NA	NA
WP_114908549.1\|480709_480901_-	hypothetical protein	NA	NA	NA	NA
WP_114908550.1\|480919_483106_-	replication endonuclease	Q94N00	Haemophilus_virus	9.2e-166	42.7
WP_005691706.1\|483115_483424_-	hypothetical protein	NA	NA	NA	NA
WP_114908551.1\|483539_483794_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_157997919.1\|483790_483952_-	hypothetical protein	NA	NA	NA	NA
WP_114908552.1\|483944_484343_-	hypothetical protein	NA	NA	NA	NA
WP_114908553.1\|484360_484621_-	hypothetical protein	NA	NA	NA	NA
WP_005633751.1\|484712_485003_-	hypothetical protein	NA	NA	NA	NA
WP_114908554.1\|485368_485608_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_114908555.1\|485730_486426_+	helix-turn-helix transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	4.1e-35	40.7
WP_114908556.1\|486439_487120_+	hypothetical protein	NA	NA	NA	NA
WP_114908557.1\|487141_487381_+	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA
WP_053465676.1\|487430_487670_+	hypothetical protein	NA	NA	NA	NA
WP_114908558.1\|487669_487873_+	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA
WP_114908559.1\|487929_488151_+	excalibur calcium-binding domain-containing protein	Q19UP2	Mannheimia_phage	8.5e-11	52.1
WP_114908560.1\|488203_488698_+	hypothetical protein	NA	NA	NA	NA
WP_114908561.1\|488694_489060_+	hypothetical protein	NA	NA	NA	NA
WP_114909567.1\|489147_489360_+	hypothetical protein	NA	NA	NA	NA
WP_114908562.1\|489494_490688_-	phage late control D family protein	R9QBT3	Mannheimia_phage	1.5e-101	50.8
WP_114908563.1\|490687_491125_-\|tail	phage tail protein	A0A0M3LQ18	Mannheimia_phage	9.1e-41	57.4
WP_005642263.1\|491125_491464_-	hypothetical protein	NA	NA	NA	NA
WP_005633772.1\|491631_491778_-\|tail	GpE family phage tail protein	E5E3Q0	Burkholderia_phage	2.2e-07	65.0
WP_114908564.1\|491777_492077_-\|tail	phage tail assembly protein	A0A0F7LBN9	Escherichia_phage	8.0e-12	44.0
WP_005633774.1\|492161_492668_-\|tail	phage major tail tube protein	Q19UP8	Mannheimia_phage	3.2e-53	60.1
WP_114908565.1\|492671_493856_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A1S6KZY7	Salmonella_phage	1.6e-103	48.7
WP_114909568.1\|494276_495143_-	hypothetical protein	F6MIM2	Haemophilus_phage	2.2e-118	72.4
WP_167403160.1\|495163_495310_-	hypothetical protein	NA	NA	NA	NA
WP_114908566.1\|495290_495791_-	enoyl-CoA hydratase	F6MIM0	Haemophilus_phage	9.8e-47	57.3
WP_114908567.1\|495783_496539_-	hypothetical protein	Q94MX9	Haemophilus_virus	4.6e-32	56.7
WP_114908568.1\|496549_497452_-\|tail	tail fiber protein	M1TAS6	Escherichia_phage	3.2e-48	45.9
WP_114908569.1\|497452_498019_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	1.1e-25	37.0
WP_114908570.1\|498011_498926_-\|plate	baseplate J/gp47 family protein	Q858V6	Yersinia_virus	3.0e-70	47.8
WP_114908571.1\|498922_499258_-	GPW/gp25 family protein	Q19UQ6	Mannheimia_phage	4.4e-19	56.6
WP_114908572.1\|499259_499859_-\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	7.9e-43	64.5
WP_114908573.1\|499962_502860_-\|tail	phage tail tape measure protein	A0A0M3LS92	Mannheimia_phage	3.7e-69	30.0
WP_114908574.1\|502931_503243_+	hypothetical protein	NA	NA	NA	NA
WP_114908575.1\|503253_503724_-	phage virion morphogenesis protein	Q19UR2	Mannheimia_phage	5.8e-41	60.1
WP_053465691.1\|503720_504197_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	4.3e-28	47.1
WP_005633796.1\|504193_504409_-	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	1.4e-10	47.9
WP_114908576.1\|504583_504934_-	chemotaxis protein	NA	NA	NA	NA
WP_005633800.1\|504918_505437_-	lysozyme	A0A0M3LPQ1	Mannheimia_phage	7.3e-37	46.6
WP_005633803.1\|505429_505651_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_005668467.1\|505652_505862_-\|tail	tail protein X	E5G6M9	Salmonella_phage	4.5e-06	40.6
WP_114908577.1\|505861_506368_-\|head	head completion/stabilization protein	A0A0M3LPQ0	Mannheimia_phage	9.6e-34	46.4
WP_114908578.1\|506492_507155_-\|terminase	terminase	Q19US0	Mannheimia_phage	1.2e-44	45.4
WP_114908579.1\|507154_508186_-\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	6.8e-103	56.6
WP_114908580.1\|508196_509024_-\|capsid	GPO family capsid scaffolding protein	Q19UT4	Mannheimia_phage	1.3e-67	51.6
WP_114908581.1\|509188_510970_+\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	1.1e-217	65.4
WP_114908582.1\|510979_511990_+\|portal	phage portal protein	Q19UT6	Mannheimia_phage	1.3e-119	61.2
WP_162790762.1\|512667_513807_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
512489:512539	attR	NA	NA	NA	NA
WP_114908584.1\|513816_514728_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_114908585.1\|514757_515600_-	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_114908586.1\|515599_516832_-	murein hydrolase activator EnvC	A0A292GJG6	Xanthomonas_phage	2.0e-08	40.2
WP_005625827.1\|517007_517691_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_114908587.1\|517768_518371_+	hypothetical protein	NA	NA	NA	NA
WP_005625828.1\|518457_518670_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_114908588.1\|518844_519981_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_114908589.1\|519958_520231_+	oxidative damage protection protein	NA	NA	NA	NA
WP_114908590.1\|520245_521322_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_046939867.1\|522300_522639_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_114908591.1\|522747_524703_-	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	1.6e-39	31.0
WP_053465245.1\|524718_525321_-	recombination protein RecR	NA	NA	NA	NA
WP_114908592.1\|525382_525712_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_114908593.1\|525880_526726_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_114908594.1\|526798_529393_-	penicillin-binding protein 1A	NA	NA	NA	NA
WP_114908595.1\|529491_530289_+	pilus assembly protein PilM	NA	NA	NA	NA
WP_114908596.1\|530289_530796_+	competence protein B	NA	NA	NA	NA
WP_114908597.1\|530792_531314_+	competence protein C	NA	NA	NA	NA
WP_114908598.1\|531310_531724_+	pilus assembly protein PilP	NA	NA	NA	NA
WP_114908599.1\|531733_533071_+	type IV pilus secretin PilQ family protein	NA	NA	NA	NA
WP_162790811.1\|533079_533766_+	ComF family protein	NA	NA	NA	NA
WP_005634545.1\|533842_534439_+	Fe-S biogenesis protein NfuA	NA	NA	NA	NA
WP_114908601.1\|534506_535304_+	NAD(+) diphosphatase	NA	NA	NA	NA
WP_114908602.1\|535336_535927_+	YjaG family protein	NA	NA	NA	NA
WP_005634530.1\|536064_536337_+	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	1.5e-20	62.2
WP_114908603.1\|536464_537238_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_114908604.1\|537293_539126_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	1.2e-134	44.3
WP_114908605.1\|539245_539545_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_114908606.1\|539538_540519_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA

DBSCAN-SWA_2

1142120 : 1191326

Klosneuvirus(16.67%)

holin,transposase,tRNA,integrase

attL 1167212:1167230|attR 1185781:1185799

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114908982.1\|1142120_1143854_-\|tRNA	arginine--tRNA ligase	A0A1V0SIS8	Klosneuvirus	4.0e-87	36.2
WP_114908983.1\|1143933_1144503_+	VOC family protein	NA	NA	NA	NA
WP_114908984.1\|1144507_1144804_+	hypothetical protein	NA	NA	NA	NA
WP_114908985.1\|1144833_1145298_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_114908986.1\|1145520_1147170_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_111407288.1\|1147276_1148359_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	1.2e-30	29.3
WP_162790783.1\|1148368_1149775_-	replicative DNA helicase	O80281	Escherichia_phage	7.5e-169	68.3
WP_114908988.1\|1149916_1151353_-	pyruvate kinase	NA	NA	NA	NA
WP_114908989.1\|1151793_1152198_-	YhcB family protein	NA	NA	NA	NA
WP_114908990.1\|1152226_1152577_-	RidA family protein	NA	NA	NA	NA
WP_053465502.1\|1152688_1153405_+	YwiC-like family protein	NA	NA	NA	NA
WP_114908991.1\|1153405_1153948_+	sel1 repeat family protein	NA	NA	NA	NA
WP_005653165.1\|1153961_1154369_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_065246690.1\|1154464_1155148_+	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_005632431.1\|1155160_1155646_+	hypothetical protein	NA	NA	NA	NA
WP_114908992.1\|1155645_1156266_+	cobalt transporter CbiM	NA	NA	NA	NA
WP_114908993.1\|1156265_1156898_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_114908994.1\|1156899_1157517_+	energy-coupling factor ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	3.5e-14	29.1
WP_114908995.1\|1157664_1158474_+	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA
WP_114908996.1\|1158477_1159590_+	hydrogenase formation protein HypD	NA	NA	NA	NA
WP_114908997.1\|1159591_1160605_+	hydrogenase expression/formation protein HypE	NA	NA	NA	NA
WP_114908998.1\|1161194_1162262_+	DNA polymerase IV	NA	NA	NA	NA
WP_114908999.1\|1162294_1162831_+	elongation factor P hydroxylase	NA	NA	NA	NA
WP_114909000.1\|1163032_1163542_+	sel1 repeat family protein	NA	NA	NA	NA
WP_114909001.1\|1163541_1164753_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_114909002.1\|1164765_1165314_+	sel1 repeat family protein	NA	NA	NA	NA
WP_114909003.1\|1165469_1166552_+	peptide chain release factor 1	W8EDB3	Pseudomonas_phage	1.3e-08	42.2
WP_162790784.1\|1166604_1167045_+	RDD family protein	NA	NA	NA	NA
WP_114909005.1\|1167044_1167923_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
1167212:1167230	attL	NA	NA	NA	NA
WP_114909006.1\|1167922_1168726_+	SirB1 family protein	NA	NA	NA	NA
WP_114909007.1\|1168740_1169595_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	3.4e-47	39.7
WP_114909008.1\|1169682_1170057_+\|transposase	transposase	NA	NA	NA	NA
WP_114909009.1\|1170249_1170639_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	6.1e-12	33.3
WP_114909010.1\|1170660_1170765_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_114909011.1\|1170881_1172837_+	recombinase	NA	NA	NA	NA
WP_080565535.1\|1172880_1172997_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_114909012.1\|1173051_1173999_+	2-hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	9.9e-24	29.1
WP_114909013.1\|1173998_1175180_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_162790815.1\|1175202_1176492_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	6.9e-20	30.5
WP_114909015.1\|1176500_1177643_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
WP_114909016.1\|1177652_1178300_+	DUF452 family protein	NA	NA	NA	NA
WP_114909017.1\|1178287_1179067_+	malonyl-ACP O-methyltransferase BioC	NA	NA	NA	NA
WP_114909018.1\|1179079_1179721_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_114909019.1\|1179802_1180486_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	1.6e-36	39.6
WP_114909020.1\|1180485_1181736_+	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA
WP_167403163.1\|1181974_1183042_+	3-deoxy-7-phosphoheptulonate synthase AroG	A0A1Z1LYN9	Serratia_phage	8.4e-80	45.5
WP_114909022.1\|1183112_1183553_-	LexA family transcriptional regulator	NA	NA	NA	NA
WP_114909023.1\|1183840_1185085_+	serine/threonine transporter SstT	NA	NA	NA	NA
WP_114909024.1\|1185205_1185814_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
1185781:1185799	attR	NA	NA	NA	NA
WP_114909025.1\|1185813_1186368_+	molecular chaperone	NA	NA	NA	NA
WP_114909026.1\|1186415_1186970_-	NAD(P)H nitroreductase	NA	NA	NA	NA
WP_114909027.1\|1187067_1188915_+	signal peptide peptidase SppA	NA	NA	NA	NA
WP_114909028.1\|1188952_1189750_-\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	1.0e-05	46.7
WP_114909029.1\|1189749_1190451_-	NTP transferase domain-containing protein	NA	NA	NA	NA
WP_114909030.1\|1190447_1191326_-\|holin	choline transport protein LicB	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP031243

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection