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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP031249 Haemophilus influenzae strain M15895 chromosome, complete genome 1 crisprs cas3,DEDDh,DinG,csa3,WYL 0 0 145 0

Results visualization

1. NZ_CP031249
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031249_1 102579-102736 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 9765 5 uncultured_Mediterranean_phage(100.0%) protease NA
DBSCAN-SWA_2 15908 : 17579 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_3 21771 : 23811 1 Acidianus_filamentous_virus(100.0%) NA NA
DBSCAN-SWA_4 32730 : 37353 3 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 44714 : 51032 5 Erysipelothrix_phage(25.0%) NA NA
DBSCAN-SWA_6 54424 : 54709 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_7 65432 : 75190 8 Bacillus_phage(25.0%) tRNA NA
DBSCAN-SWA_8 90475 : 91168 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_9 97318 : 103835 6 uncultured_Mediterranean_phage(33.33%) tRNA NA
DBSCAN-SWA_10 107210 : 110029 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_11 115253 : 116390 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_12 122031 : 128613 7 Catovirus(20.0%) tRNA NA
DBSCAN-SWA_13 135280 : 136417 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_14 153070 : 158818 6 Vibrio_phage(25.0%) protease NA
DBSCAN-SWA_15 163000 : 164371 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_16 175869 : 183681 7 Tetraselmis_virus(50.0%) NA NA
DBSCAN-SWA_17 187555 : 189522 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_18 194164 : 195091 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_19 199281 : 200793 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_20 208985 : 214115 4 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_21 221382 : 224118 3 Planktothrix_phage(66.67%) NA NA
DBSCAN-SWA_22 229728 : 233136 3 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_23 237607 : 241519 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_24 250867 : 251461 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_25 258015 : 259860 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_26 263673 : 279235 16 Haemophilus_phage(60.0%) head,capsid,plate,tail NA
DBSCAN-SWA_27 282687 : 283533 1 Haemophilus_phage(100.0%) NA NA
DBSCAN-SWA_28 294274 : 297927 4 Catovirus(25.0%) NA NA
DBSCAN-SWA_29 302419 : 304827 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_30 308367 : 316914 9 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_31 334845 : 335493 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_32 347614 : 347875 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_33 356311 : 363951 3 Rhizobium_phage(50.0%) NA NA
DBSCAN-SWA_34 367437 : 368985 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_35 373352 : 373838 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_36 387272 : 406571 19 Indivirus(11.11%) tRNA NA
DBSCAN-SWA_37 417389 : 424062 6 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_38 429866 : 433429 2 Staphylococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_39 441864 : 445125 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_40 449263 : 454094 6 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_41 457996 : 461077 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_42 466579 : 476760 12 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_43 480035 : 481556 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_44 490110 : 502294 10 Klosneuvirus(20.0%) tRNA NA
DBSCAN-SWA_45 523132 : 529243 7 Planktothrix_phage(20.0%) tRNA NA
DBSCAN-SWA_46 539040 : 539673 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_47 543807 : 556143 10 Escherichia_phage(20.0%) NA NA
DBSCAN-SWA_48 569011 : 569806 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_49 582038 : 594050 9 Enterobacteria_phage(20.0%) tRNA NA
DBSCAN-SWA_50 597275 : 599135 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_51 605828 : 608774 4 Agrobacterium_phage(33.33%) protease NA
DBSCAN-SWA_52 616470 : 617805 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_53 623133 : 627083 4 Musca_hytrovirus(50.0%) NA NA
DBSCAN-SWA_54 630638 : 639127 2 Phaeocystis_globosa_virus(50.0%) NA NA
DBSCAN-SWA_55 650539 : 658268 7 uncultured_Mediterranean_phage(20.0%) tRNA NA
DBSCAN-SWA_56 666326 : 668283 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_57 676878 : 680275 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_58 684376 : 693586 10 Tupanvirus(25.0%) tRNA NA
DBSCAN-SWA_59 696814 : 708724 10 Bacillus_virus(20.0%) NA NA
DBSCAN-SWA_60 716115 : 717300 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_61 724893 : 726453 2 Prochlorococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_62 734801 : 735777 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_63 740047 : 740671 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_64 745334 : 755371 11 Synechococcus_phage(50.0%) transposase NA
DBSCAN-SWA_65 759973 : 764992 4 Heterosigma_akashiwo_virus(50.0%) NA NA
DBSCAN-SWA_66 772861 : 776213 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_67 787725 : 787938 2 Macacine_betaherpesvirus(100.0%) transposase NA
DBSCAN-SWA_68 797236 : 799221 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_69 809619 : 811467 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_70 823622 : 830574 3 Lactococcus_phage(33.33%) NA NA
DBSCAN-SWA_71 844113 : 855913 9 Catovirus(20.0%) tRNA NA
DBSCAN-SWA_72 859819 : 861276 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_73 867416 : 868733 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_74 885620 : 900311 13 Tupanvirus(16.67%) NA NA
DBSCAN-SWA_75 903387 : 912542 8 Anguillid_herpesvirus(20.0%) NA NA
DBSCAN-SWA_76 916657 : 918502 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_77 922572 : 923547 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_78 932441 : 934655 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_79 938450 : 939794 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_80 946892 : 962344 10 uncultured_Mediterranean_phage(40.0%) tRNA NA
DBSCAN-SWA_81 968568 : 969156 1 Ugandan_cassava_brown_streak_virus(100.0%) NA NA
DBSCAN-SWA_82 982447 : 983293 1 Salicola_phage(100.0%) NA NA
DBSCAN-SWA_83 986891 : 988334 1 Escherichia_phage(100.0%) tRNA NA
DBSCAN-SWA_84 993930 : 995247 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_85 1004752 : 1007674 4 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_86 1013892 : 1014447 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_87 1019342 : 1030573 13 Salmonella_phage(16.67%) tRNA NA
DBSCAN-SWA_88 1038346 : 1043252 5 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_89 1047979 : 1053535 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_90 1057025 : 1065103 6 Salmonella_virus(25.0%) tRNA NA
DBSCAN-SWA_91 1071783 : 1079499 10 unidentified_phage(20.0%) tRNA NA
DBSCAN-SWA_92 1085764 : 1086685 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_93 1090043 : 1091339 2 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_94 1095983 : 1097221 2 Saccharomonospora_phage(50.0%) NA NA
DBSCAN-SWA_95 1100676 : 1103895 3 Mycoplasma_phage(33.33%) NA NA
DBSCAN-SWA_96 1111101 : 1115509 3 Pandoravirus(50.0%) tRNA NA
DBSCAN-SWA_97 1132483 : 1134434 2 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_98 1145214 : 1155219 6 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_99 1159805 : 1166244 4 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_100 1183165 : 1184014 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_101 1191418 : 1194190 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_102 1198093 : 1199131 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_103 1206333 : 1208130 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_104 1212340 : 1224441 8 Wolbachia_phage(20.0%) NA NA
DBSCAN-SWA_105 1232802 : 1243529 8 Bacillus_phage(40.0%) tRNA NA
DBSCAN-SWA_106 1247507 : 1248221 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_107 1260947 : 1264259 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_108 1267906 : 1269685 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_109 1275633 : 1277694 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_110 1288718 : 1293725 5 Equid_alphaherpesvirus(25.0%) NA NA
DBSCAN-SWA_111 1325195 : 1327299 3 Thermobifida_phage(50.0%) NA NA
DBSCAN-SWA_112 1332926 : 1338137 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_113 1346291 : 1351457 6 Faustovirus(33.33%) NA NA
DBSCAN-SWA_114 1355574 : 1371201 14 Bacillus_virus(28.57%) NA NA
DBSCAN-SWA_115 1375022 : 1447686 56 Mannheimia_phage(28.57%) protease,portal,tail,head,capsid,terminase NA
DBSCAN-SWA_116 1458609 : 1459671 1 Bodo_saltans_virus(100.0%) protease NA
DBSCAN-SWA_117 1462858 : 1467089 4 Dickeya_phage(33.33%) NA NA
DBSCAN-SWA_118 1473146 : 1475228 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_119 1484758 : 1488626 3 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_120 1492273 : 1500389 7 Streptococcus_phage(25.0%) protease,tRNA NA
DBSCAN-SWA_121 1508270 : 1511826 3 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_122 1521085 : 1537789 15 Organic_Lake_phycodnavirus(14.29%) tRNA NA
DBSCAN-SWA_123 1542720 : 1558614 12 Vibrio_phage(16.67%) tRNA NA
DBSCAN-SWA_124 1561969 : 1674024 135 Mannheimia_phage(32.94%) protease,transposase,integrase,portal,tRNA,tail,head,capsid,terminase,lysis,holin,plate attL 1557169:1557187|attR 1639750:1639768
DBSCAN-SWA_125 1692472 : 1693129 1 Cellulophaga_phage(100.0%) NA NA
DBSCAN-SWA_126 1697381 : 1697834 1 Pseudomonas_phage(100.0%) protease NA
DBSCAN-SWA_127 1703894 : 1704113 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_128 1712722 : 1716944 3 Micromonas_pusilla_virus(33.33%) protease NA
DBSCAN-SWA_129 1720397 : 1722065 1 Escherichia_phage(100.0%) tRNA NA
DBSCAN-SWA_130 1732196 : 1734662 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_131 1743644 : 1760057 16 Acinetobacter_phage(37.5%) tRNA NA
DBSCAN-SWA_132 1771130 : 1772403 2 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_133 1778359 : 1783832 3 Tupanvirus(50.0%) tRNA NA
DBSCAN-SWA_134 1790716 : 1792444 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_135 1797367 : 1804403 5 Virus_Rctr197k(33.33%) NA NA
DBSCAN-SWA_136 1808964 : 1809219 1 Burkholderia_phage(100.0%) transposase NA
DBSCAN-SWA_137 1812860 : 1823921 12 Staphylococcus_phage(14.29%) tRNA NA
DBSCAN-SWA_138 1827352 : 1845623 13 Synechococcus_phage(22.22%) tRNA NA
DBSCAN-SWA_139 1851716 : 1854399 2 Indivirus(50.0%) holin NA
DBSCAN-SWA_140 1858427 : 1861666 3 Edwardsiella_phage(50.0%) NA NA
DBSCAN-SWA_141 1867466 : 1877187 9 Brazilian_cedratvirus(20.0%) NA NA
DBSCAN-SWA_142 1880731 : 1881394 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_143 1886906 : 1890614 4 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_144 1899439 : 1900495 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_145 1912448 : 1916230 3 Indivirus(50.0%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage