CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022586	Mycoplasma bovis strain MJ2 chromosome, complete genome	3 crisprs	NA	1	1	5	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022586_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022586_1

372562-372668

Orphan

Consensus_repeat	Method
AAGATCAAGGCAACCTAAATCAACAAGATAAAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022586_1

>merge|NZ_CP022586|1|372562-372668|CRISPRCasFinder
AAGATCAAGGCAACCTAAATCAACAAGATAAAAATAATGAGGAAAATCAAAAAAATGAATAAATGCCCCACAAAGATCAAGGCAACCTAAATCAACAAGATAAAAAT

>NZ_CP022586|1|1|372562-372668|CRISPRCasFinder
AAGATCAAGGCAACCTAAATCAACAAGATAAAAAT	AATGAGGAAAATCAAAAAAATGAATAAATGCCCCACA
AAGATCAAGGCAACCTAAATCAACAAGATAAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022586.1\|WP_013456083.1\|374932_376120_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP022586.1\|WP_075271114.1\|384713_386942_+\|putative-immunoglobulin-blocking-virulence-protein	unknown	unknown	gnl\|CDD\|275319
NZ_CP022586.1\|WP_013455983.1\|367444_368407_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|224383
NZ_CP022586.1\|WP_013456498.1\|376253_377501_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022586.1\|WP_115266349.1\|363988_364321_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380386
NZ_CP022586.1\|WP_013456078.1\|364546_364954_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP022586.1\|WP_075271152.1\|379786_381997_+\|putative-immunoglobulin-blocking-virulence-protein	unknown	unknown	gnl\|CDD\|275319
NZ_CP022586.1\|WP_013456635.1\|363099_363987_-\|UTP--glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|133021
NZ_CP022586.1\|WP_075271115.1\|382029_384639_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366776
NZ_CP022586.1\|WP_078086167.1\|369875_371477_+\|IS1634-like-element-ISMbov3-family-transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP022586.1\|WP_013455970.1\|377636_379601_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|223350
NZ_CP022586.1\|WP_080551570.1\|365822_366851_+\|IS30-like-element-ISMbov1-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP022586.1\|WP_013456339.1\|374022_374844_-\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|224398
NZ_CP022586.1\|WP_075271112.1\|387137_389387_+\|putative-immunoglobulin-blocking-virulence-protein	unknown	unknown	gnl\|CDD\|275319
NZ_CP022586.1\|WP_013456269.1\|368590_369649_+\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NZ_CP022586.1\|WP_013455979.1\|359992_362725_-\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_CP022586.1\|WP_013456157.1\|364955_365390_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP022586.1\|WP_075271110.1\|392046_393558_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022586.1\|WP_013456160.1\|371610_372318_-\|MjaI-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|370566
NZ_CP022586.1\|WP_075271146.1\|389416_391993_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366776

Protein	Function_ID	Function_description	E-value
NZ_CP022586.1\|WP_013456083.1\|374932_376120_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP022586.1\|WP_075271114.1\|384713_386942_+\|putative-immunoglobulin-blocking-virulence-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0
NZ_CP022586.1\|WP_013455983.1\|367444_368407_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|224383	COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair].	3.3171e-21
NZ_CP022586.1\|WP_115266349.1\|363988_364321_-\|hypothetical-protein	gnl\|CDD\|380386	cd06981, cupin_reut_a1446, Cupriavidus pinatubonensis reut_a1446 and related proteins, cupin domain. This family includes bacterial and some eukaryotic proteins homologous to reut_a1446, a Cupriavidus pinatubonensis protein of unknown function that may be related to mannose-6-phosphate isomerase. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.02306e-16
NZ_CP022586.1\|WP_013456078.1\|364546_364954_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	1.79038e-70
NZ_CP022586.1\|WP_075271152.1\|379786_381997_+\|putative-immunoglobulin-blocking-virulence-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0
NZ_CP022586.1\|WP_013456635.1\|363099_363987_-\|UTP--glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|133021	cd02541, UGPase_prokaryotic, Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.	5.35032e-119
NZ_CP022586.1\|WP_075271115.1\|382029_384639_+\|hypothetical-protein	gnl\|CDD\|366776	pfam01732, DUF31, Putative peptidase (DUF31). This domain has no known function. It is found in various hypothetical proteins and putative lipoproteins from mycoplasmas. It appears to be related to the superfamily of trypsin peptidases and so may have a peptidase function.	1.79194e-50
NZ_CP022586.1\|WP_078086167.1\|369875_371477_+\|IS1634-like-element-ISMbov3-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	1.89494e-18
NZ_CP022586.1\|WP_013455970.1\|377636_379601_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|223350	COG0272, Lig, NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair].	0
NZ_CP022586.1\|WP_080551570.1\|365822_366851_+\|IS30-like-element-ISMbov1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.23257e-27
NZ_CP022586.1\|WP_013456339.1\|374022_374844_-\|DNA-binding-protein-WhiA	gnl\|CDD\|224398	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown].	1.9574e-40
NZ_CP022586.1\|WP_075271112.1\|387137_389387_+\|putative-immunoglobulin-blocking-virulence-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0
NZ_CP022586.1\|WP_013456269.1\|368590_369649_+\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.0519e-31
NZ_CP022586.1\|WP_013455979.1\|359992_362725_-\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_CP022586.1\|WP_013456157.1\|364955_365390_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	3.78069e-82
NZ_CP022586.1\|WP_013456160.1\|371610_372318_-\|MjaI-family-restriction-endonuclease	gnl\|CDD\|370566	pfam09568, RE_MjaI, MjaI restriction endonuclease. This family includes the MjaI (recognizes CTAG but cleavage site unknown) restriction endonuclease.	3.88844e-32
NZ_CP022586.1\|WP_075271146.1\|389416_391993_+\|hypothetical-protein	gnl\|CDD\|366776	pfam01732, DUF31, Putative peptidase (DUF31). This domain has no known function. It is found in various hypothetical proteins and putative lipoproteins from mycoplasmas. It appears to be related to the superfamily of trypsin peptidases and so may have a peptidase function.	1.7892e-53

>NZ_CP022586.1|WP_013456160.1|371610_372318_-|MjaI-family-restriction-endonuclease
MKTKQNDDFRYEAIIQNSECLEKINFPKYFSPIVNLANQFTKATSPKNVGQLSELFKQYESYIKSQSSNLIPSVRNWEEYYETAVIEYGFSKDEAVDNAINKIFSMLKNFQNMLNSYDEQSLKNDVGVWVKKLMFEKTFTGLSVQKLIVEHIIKLTGCNYIWRLSTASEESLNIDAFINGKPIQIKPISYEHKKITKAIENIQIPIIEYNLNKNDGNIKIIVSNIKELKDYLKSK
>NZ_CP022586.1|WP_078086167.1|369875_371477_+|IS1634-like-element-ISMbov3-family-transposase
MSIGVPRPDNKGFVYRLGYGYLHELKQYHDDPLTIIKAIIANFPLSWTKEQARTKLDEIIKEKKETKKEVLERFKGYEVVEKLFDYFNIFNDCSPTKSTTLKDVVLQLIYQRIKNPISVFNTYMTAKKEKIDTYSKNSFYRSLDYIAKNKDEILRNLNAKICANTNRKIDVLWFDATTTYFETFSREGYKKPGYSKDGKFKEDQIVIGMATDKNEIPLHYKIFPGNVTDSNTFIPFMLEIADIYEVNSVTIIADKGMSVNRNIRFLESKNWKYIISYRMKAGSKQFKEYVLDEKDYVNDGGLIYKTRDIASSYNKKRINGHFRRQIISFSQKRATKDKNDRDILIQNFTKKMNKDNLVSCDDLAGSKKYRFFKPINKGAFYELDIEKIQEDQKYDGYYVYETNRTDLSVKEVINLYSKQWQIESNFKTLKGKLSLRPMYLSTWNHIVGYICLCFISLVFLNYIIYILNSKLGLTGKSKITEHKVINVIKEVKEIEVFVNKQKIETIQVYNDELQESWQTYQILLELLTKEKVT
>NZ_CP022586.1|WP_013456269.1|368590_369649_+|site-specific-DNA-methyltransferase
MHTKHTILNIDALKMNSHIDDESVDLVITSPPYPMIKMWDEIFEINENEIKTEADVNSAFLKATQFLNNIWEKVDKSIKPGGIVCINIGDATRNLGGNFRLFSNSGQVINFFIKKGYLQLPSIIWRKQTNAPNKFMGSGMLPAGAYATLEHEWILIFRKGITKREFKNAKDKSLRNESAFFWEERNVWFSDLWDFKGIKQKNDIKNSRDRTAAYPIELPYRLISMFSVKNDIVFDPFLGTGTTTLASMLLQRNSIGVEIDKSLCNHFKEYLVKNDVKLVDNFNDKISKRISSHTEFVKKRVNEGKLLKHYNSILGTEVMTSQEKFISFNKVSSINKIDDKTFEVIYKTLQSE
>NZ_CP022586.1|WP_013455983.1|367444_368407_-|DNA-polymerase-III-subunit-delta
MIFIYGPEKFLIEQEVQRIRKEHNDKVLEIFRFDDQASINDLISSASSNNLFTGSKLFLIYALPFFDKSILKDDLKNADDLINAINVNNQDIFVFINENIISKDKISVNSWTKFIFENNNHEVTMIEAKEISESKLFSLAKSLANKHKLHIDDEAIKLLINKVNNDTLMLSAEIIKLSNLEKHISAEVIENSTDTMLGDDVFAFSNALETNDLGIIWSKYKEKMLEGTEISALIGQISQIFIIAHQIYAYKVCHLSIDQLSRDLKLNSYRIKKISYFLSKIGINKIKKMILSLSKLDKDIKNGLISEKIGFERFLITFFN
>NZ_CP022586.1|WP_080551570.1|365822_366851_+|IS30-like-element-ISMbov1-family-transposase
MKTVSNIVGFKSRSIYNLFDRITIETKRGYAKYQKKCKLCGMDLKGKTIYVISALKFLNLIETRHDSKRLENNSKLLMKYIEIFKFYKQLLYFYLKNRNSFNLDSKAVKQSVASIIFKYIRELEAQGKLQNSYIPSVQNFYRILAKHSAFGLKLDILPYKSNGKYGSRTTVKHETKKKTIGKLITERPESVNLRLNDNDYEMDTVIGLRSDNYCILTLINRKSRMFYCTLSRRNAKAIKENLEKLIKDNNLVIDTLTIDNGSENYKLPEIESIKEIFHCHPYSSSEKGSIENAHRLLRRYIPKGKSIDKYVGQDLKPIADFINSHPRIYKGVSGFKCAKQMQ
>NZ_CP022586.1|WP_013456157.1|364955_365390_-|50S-ribosomal-protein-L13
MRQTTIVNREKANKKWFVVDAENQVVGRLAAFVASVLRGKTKPTFTPNADMGDYVIIINAEKAIFTAKKEEDKVYYHHSGYPGGLKSITAAKLRAKKPTAIVEKAIHGMLPHTKLGNKQRRNLFVVAGPEHKYAAQKPERLEVR
>NZ_CP022586.1|WP_013456078.1|364546_364954_-|30S-ribosomal-protein-S9
MAKSNSSMIEYRGLGRRKSSTARVILRPGSGKFTINNREAKNYLLSDLHIQDAEQPLVLTETKGQFDILVNVRGGGLKGQAGAIRLGIARALLLASDTYRAKLKPAGMLTRDARSVERKKPGLNKARRARQFSKR
>NZ_CP022586.1|WP_115266349.1|363988_364321_-|hypothetical-protein
MDNNVKLINNIYSNNLIKPILGYEKFYNIAQLGNSNIELIYSNSASTDWLINNDHDEVAILVQGSASLLDDSHKKINMQAGDCLFVKKNSRHKILSTSADAIWISIHNKE
>NZ_CP022586.1|WP_013456635.1|363099_363987_-|UTP--glucose-1-phosphate-uridylyltransferase
MNKKVRKLIIPAAGWGTRFLPMTKVVHKELLPILDTPLISLLVDEAIEAGIEEIILIISERKKDIANYFAVNKELETELESKNKLSLLKKVKSTNKEGLIKIVIQHSQNGLGHALACAKNVIKDEPFAIILGDDLIKSKVPAIKQLIEFYYKTGSNILGVQSVSDSDIPKYGIVAPIDENEKSTNFFKIKGAVEKPKLSEAPSNKAILGRYVFNSEILDILSKIEYDGSNEIQVVDAFEKLQNEYKQDIYAFVFEGTRYDLGSVKGFVQANIDYALDNIELKDELTEFINEKLSE
>NZ_CP022586.1|WP_013455979.1|359992_362725_-|cation-transporting-P-type-ATPase
MKWDEAQKFNGLSDEQVAINLQKYGENTLTKSKKINPIVAYFKQFIDPMVILLIIAAIISVSLAIFEHIKGSRNSTQIIIGYVEPAIIMLVILLNSAIGAYQEVKSDQAVRALENKTISNSTVIRNNEVQNIPANMLVVGDLVLLSAGDTINADGRIVNASNFYVVESSLTGESEAVLKTTNWNATDDKTLAENKHLVYSGTFVSNGKASYIVESVGKETQIGKINSSLQNQKKNLSPLQTKLNKLSKWFGYSGIILLFISMLLQIVFNNVSSGSWTNPDVYTNSLITGISLAVAAIPEGLIAFTTVILSIGVSKISKEKGLVKNLLAVETLGSANIICTDKTGTLTENKMTVVDLYLNKKGFLDKIDVNRNEFNELLNSLCFCNDAYLTIDNEEIKEIGDPTETGLLLFALKHSVTKQELLKTNNIIHTLPFDSDRKMMSVLVKDNKSDKIMITKGAPDVVITKCNNIDKDEVMQINNDWAAKSYRVLAFAKKTVNHNSIDFKDEEDLEFIGLVAMIDPPRANVAKSVLEAQNAGIKVVMITGDNLITAKSIATNLGIYDPNGDDICLDGSELKDWDDDKLRNNVQKIAVYSRVNPSDKLRIVKAWQSYDKVVAMTGDGVNDAPALKASDIGCAMGITGTDVAKQSADFILTDDNFNTIVRSVKNGRQIYDKVKTVIMNLLISSVTEVIVMLIGLIAFYYAFKNYFSDSEFYVFSASQLLWINLLTHGLPAIALGIIDSEVDVMHRPPYSKSESIFARGMGINLLWQALVISLVSLLSYTAGALYTIRFYSGLNLLTIASTCAFVTMGIATSINAINLINNNSIFKANIKKYWPVFAAISFSSLFVILVAFVPNLAKVFRMYEHLLTFHNGILLSWSLPLAFVNTICFEIKKLIVNTKTNRTSVLSVSY
>NZ_CP022586.1|WP_013456339.1|374022_374844_-|DNA-binding-protein-WhiA
MNFTKEIKLEILSKKRNIDDASEFLRGYIYSKCIIDNDIIKLRIYDKSTKSTVLKSLNKIGIKYENKNTVILINKDNFSLIEDFSYPSSFFQGVFAGNGSISNLNNSSYHLQLASNYEEFIDIIINKLNEYDFNFVKIKHNNKFIAYIKKHEKISDFLKAISVTSSFFNFMDNTISRDFLNNTNRLRNIDASNINKIVTASNKYIKNIDLMYELELENKFNDDQLKLFQIMKENPNESLSSIADLYAYKENKSISKSGIYHWLKKLEKTVMKK
>NZ_CP022586.1|WP_013456083.1|374932_376120_-|phosphopentomutase
MAKFKRIFMIVTDGLGIGPDKDQKKFGDAGANTLYSASLSSMFFIDTWKKLGIGNVAQLEGNYHVKSPLAYVSRIQEVSNAKDTLAGHWEMMGIKTEVPFPTFTETGFPEDLITELEKAFDNRKIICNKAGSGTEIIDQYAEEQKQNGSIIVYTSNDSVLQIAAHEEWIGLENLYRYGKAAREICSSKPEWNVGRIIVRPFVGEDGKYTRTFNRHDYANAPEPMILNKLQEAGIEVIAIGKINDIFVGQGISRAIHSSGDADGMDKAIELAQLDEENKFIFVNLVQFDSHYGHRRDVDGFASNVATLDSKLGKLIQVMKKDDLLIMTSDHGNDPAYPGFNHTREMLPLTIYSKLFKEPRVLNDVTGLGTTGNIVARNFGVETVSLTGEDIFDKLV
>NZ_CP022586.1|WP_013456498.1|376253_377501_-|hypothetical-protein
MSNFNLILSREKFNHQQYASVKGIVKSKLNEYYSDKKNSRKINLATVGIYTSIPLFIIGAILLLSSITISFVVIFKTGKNEWLLNPDHFRPLLASLYSLSFVFLIAWCILYPIALRARIFLKKDIVASVNNRDLTDHLLDYINLKPRYENDENGNKIVNFGHISFFKNTSNFKNLSKFNVINNKYEMYEALSNKQFIKMQNIEYRNEEWLAINNLSNKEIKRLKKAKAKVYKGKIQRIEHNLYFGIATKLLNLNKSVSVTLFDEFNNYTPESFKKLDVKDEFSILNISSEDTELMQKWANDISNLSYLNDLKNEFDSIAINSSISLKNSRRDKSFAKDLSIFIKNQEAFIWFKTPTQLLDLSFKSPTLNKDEITELIVNKILDEFYLVYLSLMFLAPFGYDNVVSIDENETIVNQ
>NZ_CP022586.1|WP_013455970.1|377636_379601_+|NAD-dependent-DNA-ligase-LigA
MESKNAKELIKSLVDKINQWNYEYYQLNKPSVSDLEYDKALWELEKLEKEYPEFVLDDSPTFKLGSFASEKFTKFIHKKPMLSLAKAYSYDDIKSFINNISKIVPAERINFNIEPKVDGLSIALHYKKGKLVKAVTRGDGTEGEDVTENIYQIKSIPKLINYLNDLEVRGEVFISKDNFKKINESNNFANARNAASGTLRQLDSTIVAKRNLSAFLYEVVEPEMHNINYQNEALEFMKKLNIPTNPFSKVVEIEELEEAISDFAEIKNKLDYDSDGLVIKLNDLQMWEKLGKTSKFPKHSIAFKYDVEVASSTIVDILTSVGRTGKITYIANIHPVILNQTSVRAATLHNHNFIKDMNININDEVNIIKAGEIIPKVISLKNSKNYVDYYKKATNCPSCNSELIEFEGIVDQFCTNDECPEKNVNNIYHFASRNCMNIVGLGLSTVKDFYPKFIKKIKDIFSLYKYKSELILLPRYGEQKVDNILNSIESVKNKAFSKVLFALGIKHIGQRAAKLISDNYVNFAEILNDSELSKLKSTKNIGPKIIESLTEYINNPLNKDLLIYLDSIFNYEGKTKAISNIFSGYSFVITGTLSEPRSHFVKIIEENSGSVSASVSGRTSYVLAGSEAGSKLEKAYKLGVKVINEEQFYKLLEH
>NZ_CP022586.1|WP_075271152.1|379786_381997_+|putative-immunoglobulin-blocking-virulence-protein
MNLFRKKKNRVIILSLATGAVISASTGAFVYSSNSDSNLSKLLFNNSRDAELASNKNNISKSTDSIKDNNVIENTKPIAPKPVEEKVINVPDTTTENSSAPEVNRNTVTPERSEPLIAKPNVVTKQISIHGVIVNATIEVVPDRHISDYDKNKGISNINPYQNIIVSKVLNVEVTKELIDKSVSNALDGKDGTGLFAGTFFKTLENIFKSSSDLATAEEVVKQNMSVYRDNIHRYEKLLNSPNVINFLTEEGKQKYPTMKFDSPIQRNIWLINHLDKTKFTKLAKDAEAFLSQGLAISGRSAIINEDGTLSSLAFAPDDQFNTVTSRVSRDNRERRVFGYDSPYGRSPDSVWEGSYQGWNKEDVTDKPEYSRYNVSSADGIKLTKLTREKTDNSPGALNEGLVVEIDASNVSGYGKTLDLINKLKNDKVQVTSYRIKNMGSNDPSQAFKKILSALPDKIPQLELFFSAEATNNSSLIALENKHIKELSLYTLGNSLLHKWSFNPLALRKTEWINTVDYNVSRDFLPNTAIPTRITFDTIAFDKEDFKDKSFDRINDGLRMVYFARNNEPFFQAGLGPGLNPDHNEGNNSYPVGIDFSRIEGIKSLRNLVFNDVVNPNNTPRKIRRLTLFNNKPSFEISSDELTHASFEHFATDAMDRFSKPKIMFSNGDVTVSIRISDSNTLDSKAIWNLSKFFEYNEKLKSTKSIKVPENASALKEQLTKLGYRVESSDGNITYT
>NZ_CP022586.1|WP_075271115.1|382029_384639_+|hypothetical-protein
MRITKKLLLISSSASLFSSLLIAAKCNNDSSKNKSNDDKKIGLLSDDQFEKLINNTNNLNDIAQLTFSSNFGQSKSLDKTLPTEIEENPGNLKISVNNKYSDSITVTVNGAKTDKDASRNISNIKGEVSVYVGFKNKSTGKEIYKNFILKGLARNPVGADHNGRLSGDPLAAIGGQQGYLDYHKKTQTERFEKDNNEYVNRLKGMLSRDGGKEVDFKTFMGIKTTEEQIKKFNETAKLVNFDSYENAALKGFTIPVYENGSTSNPKLKVYDAPEVPKGPSPIDTIGRNIYRSNGLARTLLNETYKTIAEQTFQVSFTTLKDFEDEIKEAEKLKEDSKKWTTEQFQQFTFKDRAALKANYETNLYKLELEIKSQSPEALRGLEQSFAERKKKLKENYEAEDARLEKLDSSELAKEMDKRIAEYNKLKEEKRTYSSVSGTMWIMDFMLPENSGKGATKFYFGTNSHVAKGLTNKTTKFSVSRLNENVGVGSHFRLNDLDDRFTRFSFDNVEKDAINVIFQATDFLDSKPSDFLESSQKAKFGDVEEFMDFAVIEIDFEKILENKTKNFSAISNNKNHSSNYLNKSTEDIVKLITNNYESKKDKHIKFRSESYLKDYSKIDRPIILDTKKKEEVKKFNDLDSLYILGYPSATGDYFLENYIDEDQQKVVKTNFSMWINADEKYYKNVSAQEGAPSNHPKENLERGEFLSYEIGYRSFIDKPGLTDGFLAASRTGNDLYTINGKKYFNYGLHIMPRSYVPYGGASGSSVRNKNNELIAVFHTANNSAKTGLAATFRSYGYDYKGLFGDYKLPAYDLIYGGAPGQKNSYRDALEKKYKKNGKQYKTNLFQKGFSKDQIPQQFKFNETSSTTVDK
>NZ_CP022586.1|WP_075271114.1|384713_386942_+|putative-immunoglobulin-blocking-virulence-protein
MKILKTKKNKILMFSLLSGGIVSVAAGAAIYKASSDFDLAKSIFSSDSFDSELANSNNVKHTNDSIRDKNVTEKAVEPIKVEKPKIEPIIVKTPKAEESATIEPPKEAPKPVESQPIIASPTTERRKININGVEVYAIVEVTPDRKVTEYDIKKGIANRDPYQSTIVNKLVSVEVTDQLRKSTVNKALTSGDGEGLFDGTFFKVINDLINVDKDSLDIAEGVLKQNSQIWENNLFRYKELLDSDKVVNFLMPGKDVEYKDIVKKGGFKTPNQRYIWLIANLDKSKFTKLASKSDKYLNEGLVVSPRNAKINANGEIDAHAWSPSPEFNTVTSRYSRDNRLKRVFGYNSHFWRSPADTEEGNYPGWNKTDATSEFKEYGASESDGITVHKLERIEKIKEEDGQINEGYVVNIDAKNPAGYSKTKKLIEDLKKSGKKITSYRIKNMGEADPAQKFKEILAALPDDLPQLELFFSANATNTSSLIALENKKIKELSLYTLGNSLLQKWSFNPWAFKKTAWINTNDYNVSYEYGRNKPLATRITFDTIAFDQDDYKGDNNFERINDGLRLVYYARNNERAFQGSFGPGLNPDNAEGNNSYPLGLDFSRVPNIKSLRGLEFHDSQNPSNKARKIKRLTLFNNSATFEITSNELNQASFHHIMEPVPGDSDKPKIMFSNGDITNSIKISSKEKLSPDGLTNLNKFFQLNDALKASKKIIVPKDASELISQLQGAGFNVEAGTESIIYT
>NZ_CP022586.1|WP_075271112.1|387137_389387_+|putative-immunoglobulin-blocking-virulence-protein
MSIFKKKKSRILLISLSAGIVVSVSSGALIYNASSDNSLSKLLFSSESDSLLHPSSSVDYSKTVNSITDKNVKELSKQPKVIEKPVEKIEKITPPKIEVKPEEPAATPEPPRITPEIPNYKPDVTSLIQRTEKISIFGVEVNATVLARPDRVVSEADKSRGITNVNPYQNVTVSKLLNIEVTQELENKVIQNALGSEEGQGLGLFSNNLFKIADSIGTKDGLDKAEDVLVRQNPGTWGEQIHRYKALINSGKFKDFLKEGKLEEYERLVKENSFKTANQKYLWIIINLDKSKFTKISQNSLNYLKQGLAIDPRNAIINANGEIDSLVWNVPNQYNTVTSRLSRDNSTRRAFDYDEWYLRSSDSIVDGKFPGWTKNDKTSEYSSTYNIQPNDGIKVFELTRDKPVNDGSKRNSGIVVEIDAANSSGYNKIKELIEKFKANNKEITSYRIFNMGVTSPSQEFKDILKSLPDKLPQLELFFSAQATNTSSLIALKDKNIKELSLYTMGNSLLDSWSFNPWSLNKVEWINTNDYNVSAQYPPNTPIATRISFDTVAFDQEDYSKVGDWERINNGLRMVYFVRNNEPFFQGRHGQGTEPDSSESGNSYPTGLDFSRVPTIKSLRGLVFHDIEKPNNGSRKIKRLTLANSGDSFEISSDELSAAGLENLAIGELEQPKIFFSNGQETKAIKIKLESGKKELDSSAIENLRKFYAYSDSLKVGGKSIKVDSDATELKQQLTGLGYKVEEDNGLKFT
>NZ_CP022586.1|WP_075271146.1|389416_391993_+|hypothetical-protein
MKQQNKILLIASASILSPASVVVAAKCNISNKPNSTTEARISDLSSEDFKNLIEKTNDYKSLVTLQFGSSGRNIPLSELLPSQIEDDSQNLRVVVNDKYADVIDAIVVNATTEKKLPTIISNVKGELSVSINFKNKKTNENIAKTFKVTGLKTNGGLHHSGLILRDPKDSFDGAGGFNNYLKWNQNQRFEYDNKLYINSVRNWWGGGDILKTRGLNATDEQKKKFDALAKTVGFDSYENAAIKGFSLPVYGSNGQVSGLRLFNNEVGKIPSHVDTLGRELPKTNGLARTIPNKTYQTIAKQTYQITFSFKKDFKRELAEIEENIKFFESKNDQQIKDYLDSQIQILTGNHKFALNEIEKKWASLSEEAKRGLEDSHKREIEEENKKYEAEKVKYSSWKKQDLINWQNEEKLKIEEKKKTGQLGDRVSGTIWIMDYQLPESGKTATKFYFGTNSHVAKILKEHELTGFTLSRVNENVGIHSTFKFNDLDSNFKKFSFTNPKDMISNVFDAVDFMQTSPKDYIDESQKEEYKDTEEYIDFAVIEIDFEKLNPSEVTIWSENRDIGNTIPKKDDKYELIKLITNNYEKDTKNHVKFKSKSYLDSYDEIDVPLAINDKDPNDIKKWNEKEGLFILGYPRADRDFYLDRYVDADAIKVVKENYSLWVNGDHKWYKKLATPEGQQPAFPEYTINNGGRLSYQIGYRTFTDKPGLTDGFLAAPRIGKEFYSITDKSDGKTVKYVNYGLHLMPRFYAPYGGASGSSVRNKNNELIAVYHSSNDRAKTGLAAVFRSPGKDYNKLFGNYNLPQYDLIYGGGKDQKNSYRQALEAKYKSMNGNFKTKLFENGLAEDNVPKEFRFKNSTK
>NZ_CP022586.1|WP_075271110.1|392046_393558_+|hypothetical-protein
MHSKSINIEEKRIYDDSQSLANKQRKSFIVTLYKSLLLSYFFISMLCLLFLMPHGLFSKKIIRSYAFIFDFSLLTTLDANWIFIFRLCLFGFIYFYGLLKAYLNINKNKEHIRIYGIWFSIYWALSIAGFLLFFTYHTIEVKKLVYVLFALVIFLLTDISYALFNFNTKNKTEPVIYQSKIPLVIDLISRILLTAITLAVFFGWAYSYTGSPNTIVRMFALANENNKNIPYNAFYTTAFKLFKVKSALNFIIVILMSLVIGLLLLGLKIYSIWSLAYKQLRSQIFKDRLQLYLVGILSSVIWLLSLFKLKYPPTHELFGQAESLQYLNILFGLFNLGAAIGFIALLFVKRIKLNSILIKTTIMALFQWVIWTSYMIANFINKQPTIALVNLLLTALSSLVIFYFYFRKSKLSAISNSLAISLNTILLFILILVFGFNQVLLAENNKSLIILSTNLSVAQVISIIIVLFQMIYLTYSLTQLILVIKKTSVLNDEVIEKRSYEKA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP022586_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022586_2

558995-559101

Orphan

Consensus_repeat	Method
CATCGCCAATGAAGTCTGAGCCTGTAGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022586_2

>merge|NZ_CP022586|2|558995-559101|CRISPRCasFinder
CATCGCCAATGAAGTCTGAGCCTGTAGATATGGATGAATTAAAATTAAATGATGGGAATAAGATGATGGATGATAATCCATCACCAATGAAGTCTGAGCCTGTAGAT

>NZ_CP022586|2|2|558995-559101|CRISPRCasFinder
CATCGCCAATGAAGTCTGAGCCTGTAGAT	ATGGATGAATTAAAATTAAATGATGGGAATAAGATGATGGATGATAATC
CATCACCAATGAAGTCTGAGCCTGTAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022586.1\|WP_013456478.1\|566455_567496_-\|zinc-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176257
NZ_CP022586.1\|WP_174245827.1\|546624_548226_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP022586.1\|WP_013456137.1\|554096_556739_-\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP022586.1\|WP_013456319.1\|558043_558772_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|350157
NZ_CP022586.1\|WP_013456187.1\|553663_554104_-\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|335420
NZ_CP022586.1\|WP_013456305.1\|552945_553674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022586.1\|WP_115266416.1\|570774_573753_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274008
NZ_CP022586.1\|WP_013455921.1\|567720_568452_+\|DNA-processing-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NZ_CP022586.1\|WP_115266511.1\|564341_565352_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176257
NZ_CP022586.1\|WP_013456463.1\|574493_575498_-\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP022586.1\|WP_013456004.1\|573826_574501_-\|ribonuclease-III	unknown	unknown	gnl\|CDD\|274024
NZ_CP022586.1\|WP_013456567.1\|565554_566139_-\|variable-surface-lipoprotein	unknown	unknown	unknown
NZ_CP022586.1\|WP_115266415.1\|569369_570722_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP022586.1\|WP_174245814.1\|546154_546325_-\|variable-surface-lipoprotein	unknown	unknown	unknown
NZ_CP022586.1\|WP_013456554.1\|549591_550314_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|226674
NZ_CP022586.1\|WP_013455944.1\|556749_557874_-\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP022586.1\|WP_013455952.1\|548814_549267_-\|SocA-family-protein	unknown	unknown	gnl\|CDD\|226128
NZ_CP022586.1\|WP_115266510.1\|562446_563475_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP022586.1\|WP_115266414.1\|568438_569275_-\|HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NZ_CP022586.1\|WP_013456130.1\|548422_548812_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP022586.1\|WP_013456478.1\|566455_567496_-\|zinc-dependent-alcohol-dehydrogenase	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.19893e-159
NZ_CP022586.1\|WP_174245827.1\|546624_548226_+\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	3.36377e-19
NZ_CP022586.1\|WP_013456137.1\|554096_556739_-\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP022586.1\|WP_013456319.1\|558043_558772_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|350157	cd09006, PNP_EcPNPI-like, purine nucleoside phosphorylases similar to Escherichia coli PNP-I (DeoD) and Trichomonas vaginalis PNP. Escherichia coli purine nucleoside phosphorylase (PNP)-I (or DeoD) accepts both 6-oxo and 6-amino purine nucleosides as substrates. Trichomonas vaginalis PNP has broad substrate specificity, having phosphorolytic catalytic activity with adenosine, inosine, and guanosine (with adenosine as the preferred substrate). This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	2.39285e-106
NZ_CP022586.1\|WP_013456187.1\|553663_554104_-\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|335420	pfam03652, RuvX, Holliday junction resolvase. This family of nucleases resolves the Holliday junction intermediates in genetic recombination.	2.97833e-47
NZ_CP022586.1\|WP_115266416.1\|570774_573753_-\|AAA-family-ATPase	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	3.3225e-97
NZ_CP022586.1\|WP_115266511.1\|564341_565352_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	8.82214e-146
NZ_CP022586.1\|WP_013456463.1\|574493_575498_-\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	1.76403e-145
NZ_CP022586.1\|WP_013456004.1\|573826_574501_-\|ribonuclease-III	gnl\|CDD\|274024	TIGR02191, Ribonuclease_3, ribonuclease III, bacterial. This family consists of bacterial examples of ribonuclease III. This enzyme cleaves double-stranded rRNA. It is involved in processing ribosomal RNA precursors. It is found even in minimal genones such as Mycoplasma genitalium and Buchnera aphidicola, and in some cases has been shown to be an essential gene. These bacterial proteins contain a double-stranded RNA binding motif (pfam00035) and a ribonuclease III domain (pfam00636). Eukaryotic homologs tend to be much longer proteins with additional domains, localized to the nucleus, and not included in this family. [Transcription, RNA processing].	9.29408e-60
NZ_CP022586.1\|WP_115266415.1\|569369_570722_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	5.58775e-29
NZ_CP022586.1\|WP_013456554.1\|549591_550314_-\|SDR-family-oxidoreductase	gnl\|CDD\|226674	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only].	1.0957e-80
NZ_CP022586.1\|WP_013455944.1\|556749_557874_-\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_CP022586.1\|WP_013455921.1\|567720_568452_+\|DNA-processing-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	5.818e-26
NZ_CP022586.1\|WP_115266510.1\|562446_563475_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	8.93761e-27
NZ_CP022586.1\|WP_115266414.1\|568438_569275_-\|HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	7.22901e-41
NZ_CP022586.1\|WP_013455952.1\|548814_549267_-\|SocA-family-protein	gnl\|CDD\|226128	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown].	1.41952e-29

>NZ_CP022586.1|WP_013456319.1|558043_558772_+|purine-nucleoside-phosphorylase
MPTPHLSCNKGEIAKIVLMPGDPLRAEYMAKKFLTNPKLVSLVRNIYFYTGEYKGKLVTIGASGMGVASMGIYAYELFTEYDVDVIIRLGSTGSYVDNLDVKQPVLVKRAYADGLGFVSLMTGEKTHNAYPDKEIVKLLKRSAKKKKINVLDVSCHTTDVFYSIRSLEETINKTKCQVVDNECFGLFTTAKRCNKKAAALLSVSENIVTGKSMTSDERLLEFSQMFEVALNALDNIYKHIEN
>NZ_CP022586.1|WP_013455944.1|556749_557874_-|tRNA-2-thiouridine(34)-synthase-MnmA
MSNKKKVILGMSGGVDSSVCAYLLLKQGYEVEGLFMRNWDSMLNNDFLGNENISQDICPQEQDYHDALEVANKLGIKLHRVDFVNEYWNDVFKTFISEYEAGRTPNPDILCNKYIKFKAFSDYAFNNLGADYIAMGHYAKVTDGRLYRAKDQNKDQTYFLAQLSHEQLKRVLMPLAEFNSKEEVRKIAQEQGLITASKKDSTGICFIGERKFTKFLQNYIPMQPGDIVDIRTNNKLGKHEGCFYYTIGQRKGLNLGGQAEPYYVCGHDVKKNILYVAPSSDLSYLTSDALLATGLTLNHNDFDHNNLSAKFRYRQENIPVTIELLPNNTIKVYYPSEAQAVTPGQQVVIYEGQKCLGGAVIEKIYYKGSEKTYL
>NZ_CP022586.1|WP_013456137.1|554096_556739_-|alanine--tRNA-ligase
MKKLTSTEIRQKWLDFFESKNHLVIESKSLIPVNDPSLLWINSGVATLKNYFSGKKVPPAFRLTNSQKAIRTNDIENVGVTSRHHTFFEMLGNFSIGNYFKKEAIAYAKEFLVNVLEMDFEKLYFTYYEEDLEAKNYWLENGVDESHLISGTRDTNFWDLGSGPCGPCTEIFYDRGEKYDSRGIDLLKNDIENDRYIEIWNIVFSQFNNDGEGNYTELKQKNIDTGAGLERLASIMQDVPTNYDSDLFINIIREIEKYSRYKYIIENYFVKDEHQSEINTNFKIIADHIRTVVNAIADGAKVSNVGRGYIIRRLLRRSYYKGMQLGIKDLFLHKLVKVVKDSLPYEYDEKDVIDAIKEEELLFSKTIEKGKILLESFLDNENKVFDGAVAFNLLETYGFPIELTAEILHQKGIRVDMEAFELAKEKHALASKGGKATGMDKVINSLALIDKKMDNFVGYSELSASSKVLKLFDEENEVESFETGGYVLLETTPFYATSGGQRHDKGFIIQGENKIKIIDVFKDKFGNHIHFVEGKMNNYEPVSSFVDPNIRIGLERNHSGTHLLFCALRNVLGSHIEQLGSDNNEERLTFDFPADEKPSDEQIKAIEDLVRSYITKSIDREYITTTVDKAREMGAIMTLEEGEYMDPRAVRVVRFGDITSDLCGGTHLSNTSKLESFKITNVEKKQAGVFRIRAISSIKLVNEYLSEVNKKLNEELATIIKKIKELKNDYVAPVINENEPDIETLNLSINKRIDELREVYKQLLKESSNLEFDYETVKFDKINNYDVYINLDVDASSVKLIAASIRDKFQSGKTVAIIGSKNEKELLLAIATRAIDANKMFKKLSSELNGRGGGAPILAMGKMNYSENIESLIKDYLLNA
>NZ_CP022586.1|WP_013456187.1|553663_554104_-|Holliday-junction-resolvase-RuvX
MRKLSFDLGTKTCGFAISDILEISANALETIRFDENDFNVVITKVKEIIKMYQNSIDAFVLGYPLRSNGSKSERTVMVDNFATLLANEFPGINIYLVDEYGSTIKAQRILKDAKLSNKKTKSKKDTVSAVIILNDFLQYGGQKYEL
>NZ_CP022586.1|WP_013456305.1|552945_553674_-|hypothetical-protein
MSFKEKLVQNGSPTSLGWGLIASAIIASLIGIITSITVFVRAFKIRKQFNKTLEENAKNAIMKIKGSELDAKDEFINKAFSTNINEFDMLHIVKSVYLNYAQNVLIDGLNLENLYLTLKTMTLANIEIDLRAINSKTWNEAVIKFKDKITEKPCFIDSEDKKYNLIISANDNSSNTEIFNKLYPKLTLGGLLMVIQNPIIKSDLKDLKRDLKIKNIRFEASKNKALFLYIVKSESDSLPYLQ
>NZ_CP022586.1|WP_013456554.1|549591_550314_-|SDR-family-oxidoreductase
MKKLIAITGANSGIGLASAKLFASKNYPMLLIDKNIDVLETIDFKNCLIKKIDVRDFNSLNQAIIEAQKEFGSVDLMLNNAGIMPLDKYYEQSLQDKYDIIDTNIKGVINGMDAVLPSMIKENSGTIINISSTAGRFTYDDHSVYNGSKFAVNAITQQARRELAHTNIRFSLIEPAIVNTNLLSTVKNQKIKDEYLQFQRSIDNGLKPETIAQTILYIYELPQDVTIKEILISHTNESEV
>NZ_CP022586.1|WP_013455952.1|548814_549267_-|SocA-family-protein
MNKKYSYKDVSNWFLSKESMTPKKLQKLTYYAEAWANALLGEGILSDTAFQAWVHGPVSPELWHDYKEYGWNEIEQLKPNDEKFSKNILELLDAVWITYGDKSGYELEAISHSEEPWLKARNGLSEFEISTKVIDPADMKNFYKSIYSGD
>NZ_CP022586.1|WP_013456130.1|548422_548812_-|hypothetical-protein
MNKKLTSELNLNKKTNLFHTNKEIVFKFAIVNKLDNGYDFKSLDLDGLKKFNNFVNDILEKKMTISQVEKTYMRKRFKPLVKRHIEEQDMDVREIHLGKDQQKFRLFGYFNENNYFVLTKIDSKHNFNE
>NZ_CP022586.1|WP_174245827.1|546624_548226_+|IS1634-family-transposase
MSIGVPRPDNKGFVYRLGYGYLHELKQYHDDPLTIIKAIIANFPLSWIKEQARTKLDEILKEKKETKKEVLERFKGYEVVEKLFDYLNIFNDCSPTKSTTLKDVVLQLIYQRIKNPISVFNTYMTAKKEKIDTYSKNSFYRSLDYIAKNKDEILRNLNAQICANTNRKIDVLWFNATTTYFETFSREGYKKPGYSKDGKFKEDQIVIGMATDENGIPLHYKIFPGNVTDSNTFIPFMLEIADIYEVNSVTIIADKGMSVNRNIRFLESKNWKYIISYRMKAGSKQFKEYVLDEKDYVNDGGLIYKTRDIASSYNKKRINEHFRRQIISFSQKRATKDKNDRDILIQNFTKKMNKDNLVSCDDLAGSKKYRFFKPINKGAFYELDIEKIQEDQKYDGYYVYETNRTDLSVKEVINLYSKQWQIESNFKTLKGKLSLRPMYLSTWNHIVGYICLCFISLVFLNYIIYILNSKLGLTGKSKITEHKVINVIKEVKEIEVFVNKQKIETIQVYNDELQESWQTYQILLELLTKEKVT
>NZ_CP022586.1|WP_174245814.1|546154_546325_-|variable-surface-lipoprotein
MKKIKKIISIGSLSSLLLMPLVAASCKKNDNDEKVQIINNESNSQTSKQMTPPQFY
>NZ_CP022586.1|WP_115266510.1|562446_563475_+|IS30-family-transposase
MKTVSNIVGFKSRSIYNLFDRITIETKRGYAKYQKKCKLCGIDLKGKTIYVISALKFLNLIETRHDSKRLENNSKLLMKYIDIFKFYKQLLYFYLKNRNSFNLDSKAVKQSVASIIFKYIRELEAQGKLQNSYIPSVQNFYRILAKHSAFGLKLDILPYKSNGKYGSRTTVKHETKKKTIGKLITERPESVNLRLNDNDYEMDTVIGLRSDNYCILTLINRKSRMFYCALSRRNAKAIKENLEKLIKDNNLVIDTLTIDNGSENYKLPEIESIKEIFHCHPYSSSEKGSIENAHRLLRRYIPKGKSIDKYVGQDLKPIADFINSHPRIYKGVSGFKCAKQMQ
>NZ_CP022586.1|WP_115266511.1|564341_565352_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MNKMKAFVVKAPKEYSVELIDIPEPVDNEVLVKLETSGVCHTDLHIANFDWPRQPNYPMVPGHEGIGIVTKVGPNCTKIKVGDRVGVGYMYSACGQCEYCISGKEILCVSRVVTSLVKPGTFAEYTIGHEDYVLPIPKELDIVSGAPILCGGVTSYKALKQAELKVGDYVAIIGIGGLGHFAISYAKAMGLNIVAIDIDDKKLESAKYEGAHYIYNANDLSFVQEVKELTNGGVHAVINTSVSTSSASLAMYILRRAGRQVLVGVPPKDENGKIEFPLSILGTISGEQHVLGSVVGTRQDTKEALILGTKGIVSKIGRIISLDEVKDVFEQLAKGE
>NZ_CP022586.1|WP_013456567.1|565554_566139_-|variable-surface-lipoprotein
MKKSKILILGSIASLGAIPFVAAKCGNENQNSIKEDKTDSQSKSEKSSGTVKKDSTSENSTIDKKENETAPKKQLESENSKSEKSDSVSNMNTEMPKVTESVANETDDGESISDILDDEAKKYFKKEIDAEYENIEKMINKVLKSDSDKKSEVLEYFKKLKTLLNSMFDNAKTFEDIDKIFDYLGKVVIVGKTK
>NZ_CP022586.1|WP_013456478.1|566455_567496_-|zinc-dependent-alcohol-dehydrogenase
MKAFVVTEPKKWSVKEVDVPKPKYKEVLIEMETSGICHTDLHAANYDWLVEPKYPLIPGHEGIGKVVALGEGCTRLKIGDRVALAWLHDACGYCEFCLTGRETLCPNQNMSAYTKDGSYAEYAIGHEDYVGLVPEKLDIVTGAPVVCAGVTTYKSLKQTKAKAGNFVAVIGVGGLGQMAIQYAKAMGLRPIGVDLQDEKCELALKSGAEYAFNSAKDPKFIEKIIEVTGGGVHAVVNTSVHPSAAEQGMDMLRRGGRQVLVGLPAKDKHGKDDFKVSIFWSVLLERELAGSIVGTRQDLAEALEYAAEGKVKSEVTKVVKLEEVADIFEKLQKGEFLGRAVIDFRK
>NZ_CP022586.1|WP_013455921.1|567720_568452_+|DNA-processing-protein-DprA
MNDLLIYFSILFKGNNFEIYKALKNGHKVDKYKVDETINELNEKGIKAITIFDSNYPQGLKELKYSPFVLFYKGNISLLDKNIVCATGDVVNEFVLQNVYQTCGELSKSSVLLTNNFKNIDQNIIEIFNKNKQGIIYLLANGISYNCPDVDFDKDLCITFIPPELHPKLRYFKERNVIAAALSNNLIIFSSKRNSGLINLANCFANLGKNVYCYPGLTYDDGNTYLIKSGASLITHLAEVNYF
>NZ_CP022586.1|WP_115266414.1|568438_569275_-|HAD-IIB-family-hydrolase
MKRKIFSYDLDGTLLMRNNKVHPITKKAFHDVHLKGGINILNTGRGLLKVLPLLDEFDGIDYFICSNGALIYDVKNKNHIVVGQLEPEVFKQMFEYANQNDLIISLDTSNYTATYVNKDANGNFPEWINKQDIMDFSHIKFSDYETMSKVANDSKSIITQVALRNPNEIANETTKYFNNLYKDKYSVYLTNRIYTDVNPLGISKWNGLKEFMRIYNMQDCIIYAFGDSSNDVEMLQNAHFSFAMENATDDAKEAATEVIGHYNSGAIGIKLEEIIKSS
>NZ_CP022586.1|WP_115266415.1|569369_570722_+|YitT-family-protein
MSSPVTNLKIIKRKKLLKKLHSENVNNLKLIELDKEDIDLRKYFGDDLMANLRMTNYTYYTDSANKRKKNVRKRTAILYAKRIFFIFIAALIFNFGVIAFLNRGDTLPSGLSGFPMLAVLIAKDKGYRDWDKYFALMFILINLPLLIGFGFKVKKSFTILTTVFMVSQLITNAIFTSIPQVHNFIHNYINIAPGWHKLVEFRDKAGNIIGTYENSSSWPIIINGFLGSICAGTSIAIAWKNGGSTGGADIIAYYFSTKKQKSVAGMMFTVNIIATSFFLLVFGIAARHKEAVDLGVISSSSSVESVLEQPNSIIITLKDGFTINSIKKYVSHRTIFGLREFSTILYIIFNNIVLGLMYPKYKKVTLSIATKCPDTIINYFKHIKYWHAYTIFKGISGYSQEETYFIETTLLTLETKNLISDIKVIDPKAWISIKPVEQVKGAFNTQYVEQ
>NZ_CP022586.1|WP_115266416.1|570774_573753_-|AAA-family-ATPase
MKLIKVEAHGFKSFAEPITLRFDGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDNMDDVIFAGSKTAKPMDKAVVTLTFDNKDGQSSINHEMITISRVLERGSGINQYYLNGEVCRQKDIKEIAMESGIGKSSLAIISQGTVSDIAEASAEERKGIFEEAAGVSKYKFRKKEALSKLTKTQEGLDQIGLVIAEIERKLNPLRKQAEKTKIFIAKTEELRTVEVGLLVDNIKKFGSRYEELSTELEGVQETKNDLNNRIKDLESKISQNIDFKSNLEASQREISMELDAVKDRLNNLSIAIARENERERLIVEGNIKVDKTEQINAYKTLIEKSMQRIAYFSREYDLISKRVADNNEILDKHDSELNLLNVKLNKKENDIFKIQTHLNLLKQQKEGNTLLYKGTKTILENKAIFGKGLKGTVADLIKVNKEYSRAIEAVLANALQHLVVEKSEVAVKAVEFLKQNNGGRATFIPLASIQPKSVRDDHLLAIQGQPGFIAVASEVVEVEPIYIILSQFLLGNVIVTETIHHANHISKILDNRYMIVTLDGDIIRAGGVIVGGAKSNTETLLTIDLKISELESLLPGIQIAINDDKAKQNEILNERRTCLELDSQLKNQLSNVVSQKSAEQKILDELNLKLKNISERELEIKSDSISIHSSEADLEVLSSRKSALEADFRAKHERINSLSQEINSAQVLKNDFESTLRKLLESFSEKLSEKEKSKLLLDQSRERLASQYKFTLESAEAQGYKLEMSYDQATEIVREIREEISKLGNVNLEALEQLVEEEERYNKFVKSEEELTQAKEVLESAIAQMDKIIITRLTNIIHDVNNEFNDVFATMFGGGSARLFFSDPKNILESGVEIESMPPGKSIKNLKLFSGGEKSLIAISLLFGILKARPLPLCILDEVEAALDESNVVRYAEYLQKLKSKTQFLVITHRHGTMSRVDSLFGATMQNRGVTTFFSLELAEAKKLVDDIQEDYISARQTK
>NZ_CP022586.1|WP_013456004.1|573826_574501_-|ribonuclease-III
MNSIENFLNQFNIKANSLLVYRQAFTHGSSAANAKNKNYQTLEFLGDAILQFYVSAILFNVFKDKNQGQLTLIRAKLVCTDSLNSIADRLKLKDFLLLSSNVVANEVLSSKKVGADIFESLVAAIFIDQGMPKVKEFLDKTLLPLVKQYKEGKIELKDSKTRLQEYMQSFSKKTVFYQTYQSDNNQFKSEAIYEGNVYGSGLGKSKHEAEENAANDALNKLIKS
>NZ_CP022586.1|WP_013456463.1|574493_575498_-|phosphate-acyltransferase-PlsX
MYRIAFDVNGNDNGVSAAVSASVQFLKDNDDYEIILVGDESSINVELKKIEGIPDSLRIVNNPNLPSDVKNIHKSLRENTSMNTAIDLVVDGKADAVISSGDSGTYLACATFKLKRLQGVSRSAFMPLMPTVVGRKFLLLDVGANIECKSEYLVEWAKIANVYARTLLNIVNPRVSLINIGTEDYKGLEIVKEASQLLKDNKFINYIGYTEPRYLLDGATDVAVIDGYGGNLVLKSLEGAILSFKNLLKDKIMAKPIRKFGYLFLKGAFKDVAETLDYRNVGAAWLIGLNGLSIKCHGNSDTKAYLGALNQIKLVIKNNVLEAIKKELNDQPNE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP022586_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022586_3

616212-616354

Orphan

Consensus_repeat	Method
TTTTTCAATACTCAAATTAGGTGCTTTTTAATTTAAGAATTTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022586_3

>merge|NZ_CP022586|3|616212-616354|CRISPRCasFinder
TTTTTCAATACTCAAATTAGGTGCTTTTTAATTTAAGAATTTATATTTTTTATTCTTTTGGCTATTCTCTTGTCAGAACCACCAAAAATTGGTATTATTTTTCCAATACTCAAATTAGGTGCTTTTTAATTTAAGAATTTATA

>NZ_CP022586|3|3|616212-616354|CRISPRCasFinder
TTTTTCAATACTCAAATTAGGTGCTTTTTAATTTAAGAATTTATA	TTTTTTATTCTTTTGGCTATTCTCTTGTCAGAACCACCAAAAATTGGTATTAT
TTTTCCAATACTCAAATTAGGTGCTTTTTAATTTAAGAATTTATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022586.1\|WP_115266427.1\|610749_611535_+\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|376614
NZ_CP022586.1\|WP_115266424.1\|603959_605753_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766
NZ_CP022586.1\|WP_115266423.1\|602153_603509_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|284141
NZ_CP022586.1\|WP_115266429.1\|616941_618795_+\|peptidase-S41	unknown	unknown	gnl\|CDD\|143479
NZ_CP022586.1\|WP_115266432.1\|622719_623541_-\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|273146
NZ_CP022586.1\|WP_013456509.1\|616414_616918_+\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|370103
NZ_CP022586.1\|WP_115266430.1\|618826_619723_-\|elongation-factor-Ts	unknown	unknown	gnl\|CDD\|236491
NZ_CP022586.1\|WP_080551570.1\|615067_616096_+\|IS30-like-element-ISMbov1-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP022586.1\|WP_115266426.1\|607282_609223_+\|DNA-primase	unknown	unknown	gnl\|CDD\|273595
NZ_CP022586.1\|WP_115266435.1\|628055_629894_+\|leucine-rich-repeat-protein	unknown	unknown	gnl\|CDD\|372554
NZ_CP022586.1\|WP_013456029.1\|621286_622699_+\|IS1634-like-element-ISMbov2-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP022586.1\|WP_115266431.1\|619772_620726_-\|30S-ribosomal-protein-S2	unknown	unknown	gnl\|CDD\|235396
NZ_CP022586.1\|WP_115266433.1\|624060_625422_+\|variable-surface-lipoprotein	unknown	unknown	unknown
NZ_CP022586.1\|WP_115266434.1\|625491_625719_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022586.1\|WP_078086165.1\|613631_614660_+\|IS30-like-element-ISMbov1-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP022586.1\|WP_115266422.1\|601218_602151_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226164
NZ_CP022586.1\|WP_115266425.1\|605864_607241_+\|glycine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235240
NZ_CP022586.1\|WP_013954706.1\|609215_610745_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|235640
NZ_CP022586.1\|WP_075271012.1\|625743_628053_+\|leucine-rich-repeat-protein	unknown	unknown	gnl\|CDD\|372554
NZ_CP022586.1\|WP_115266428.1\|611645_613010_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181958

Protein	Function_ID	Function_description	E-value
NZ_CP022586.1\|WP_115266427.1\|610749_611535_+\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	4.55049e-48
NZ_CP022586.1\|WP_115266424.1\|603959_605753_+\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	3.87315e-08
NZ_CP022586.1\|WP_115266423.1\|602153_603509_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|284141	pfam06646, Mycoplasma_p37, High affinity transport system protein p37. This family consists of several high affinity transport system protein p37 sequences which are specific to Mycoplasma species. The p37 gene is part of an operon encoding two additional proteins which are highly similar to components of the periplasmic binding-protein-dependent transport systems of Gram-negative bacteria.It has been suggested that p37 is part of a homologous, high-affinity transport system in M. hyorhinis, a Gram-positive bacterium.	1.13863e-42
NZ_CP022586.1\|WP_115266429.1\|616941_618795_+\|peptidase-S41	gnl\|CDD\|143479	cd07563, Peptidase_S41_IRBP, Interphotoreceptor retinoid-binding protein; serine protease family S41. Interphotoreceptor retinoid-binding protein (IRBP) is a homolog of the S41 protease, C-terminal processing peptidase (CTPase) family. It is thought to facilitate the compartmentalization of the visual cycle that requires poorly soluble and potentially toxic retinoids to cross the aqueous subretinal space between the photoreceptors and the retinal pigment epithelium (RPE). IRBP is secreted by photoreceptors into the interphotoreceptor matrix (IPM) where it is rapidly turned over by a combination of RPE and photoreceptor endocytosis. It is the most abundant soluble protein component of the IPM, consisting of homologous modules, each repeat structure arising through the duplication (as in teleost IRBP) or quadruplication (in tetrapods) of an ancient gene, arisen in the early evolution of the vertebrate eye. IRBP has been shown to promote the release of all-trans retinol from photoreceptors and facilitates its delivery to the RPE. Conversely, IRBP can promote the release of 11-cis-retinal from the RPE, prevent its isomerization in the subretinal space, and transfer it to photoreceptors. In vivo evidence implicates IRBP as a retinoid transporter in the visual cycle, suggesting a critical role for IRBP in cone function essential for human vision. IRBP is a dominant autoimmune antigen in the eye; IRBP proteolysis analysis has proven a useful biomarker for autoimmune uveitis (AU) disorders, a major cause of blindness. This family also includes a chlamydia-secreted protein, designated chlamydia protease-like activity factor (CPAF), known to degrade host proteins, enabling Chlamydia to evade host defenses and replicate.	2.47051e-09
NZ_CP022586.1\|WP_115266432.1\|622719_623541_-\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	gnl\|CDD\|273146	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam). All proteins in this family for which functions are known are DNA-adenine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The DNA adenine methylase (dam) of E. coli and related species is instrumental in distinguishing the newly synthesized strand during DNA replication for methylation-directed mismatch repair. This family includes several phage methylases and a number of different restriction enzyme chromosomal site-specific modification systems. [DNA metabolism, DNA replication, recombination, and repair].	4.25469e-81
NZ_CP022586.1\|WP_013456509.1\|616414_616918_+\|dUTP-diphosphatase	gnl\|CDD\|370103	pfam08761, dUTPase_2, dUTPase. 2-Deoxyuridine 5-triphosphate nucleotidohydrolase (dUTPase) catalyzes the hydrolysis of dUTP to dUMP and pyrophosphate (EC:3.6.1.23). Members of this family have a novel all-alpha fold and are unrelated to the all-beta fold found in dUTPases of the majority of organisms. This family contains both dUTPase homologs of dUTPase including dCTPase of phage T4.	7.0266e-36
NZ_CP022586.1\|WP_115266430.1\|618826_619723_-\|elongation-factor-Ts	gnl\|CDD\|236491	PRK09377, tsf, elongation factor Ts; Provisional.	7.10022e-107
NZ_CP022586.1\|WP_080551570.1\|615067_616096_+\|IS30-like-element-ISMbov1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.23257e-27
NZ_CP022586.1\|WP_115266426.1\|607282_609223_+\|DNA-primase	gnl\|CDD\|273595	TIGR01391, DNA_primase, DNA primase, catalytic core. Members of this family are DNA primase, a ubiquitous bacteria protein. Most members of this family contain nearly two hundred additional residues C-terminal to the region represented here, but conservation between species is poor and the C-terminal region was not included in the seed alignment. This protein contains a CHC2 zinc finger (pfam01807) and a Toprim domain (pfam01751). [DNA metabolism, DNA replication, recombination, and repair].	1.76851e-107
NZ_CP022586.1\|WP_115266435.1\|628055_629894_+\|leucine-rich-repeat-protein	gnl\|CDD\|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	4.30047e-13
NZ_CP022586.1\|WP_013456029.1\|621286_622699_+\|IS1634-like-element-ISMbov2-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	2.57572e-07
NZ_CP022586.1\|WP_115266431.1\|619772_620726_-\|30S-ribosomal-protein-S2	gnl\|CDD\|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	1.15972e-113
NZ_CP022586.1\|WP_078086165.1\|613631_614660_+\|IS30-like-element-ISMbov1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	8.16083e-27
NZ_CP022586.1\|WP_115266422.1\|601218_602151_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.43062e-56
NZ_CP022586.1\|WP_115266425.1\|605864_607241_+\|glycine--tRNA-ligase	gnl\|CDD\|235240	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional.	0
NZ_CP022586.1\|WP_013954706.1\|609215_610745_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	0
NZ_CP022586.1\|WP_075271012.1\|625743_628053_+\|leucine-rich-repeat-protein	gnl\|CDD\|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	6.48948e-20
NZ_CP022586.1\|WP_115266428.1\|611645_613010_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	1.17288e-111

>NZ_CP022586.1|WP_080551570.1|615067_616096_+|IS30-like-element-ISMbov1-family-transposase
MKTVSNIVGFKSRSIYNLFDRITIETKRGYAKYQKKCKLCGMDLKGKTIYVISALKFLNLIETRHDSKRLENNSKLLMKYIEIFKFYKQLLYFYLKNRNSFNLDSKAVKQSVASIIFKYIRELEAQGKLQNSYIPSVQNFYRILAKHSAFGLKLDILPYKSNGKYGSRTTVKHETKKKTIGKLITERPESVNLRLNDNDYEMDTVIGLRSDNYCILTLINRKSRMFYCTLSRRNAKAIKENLEKLIKDNNLVIDTLTIDNGSENYKLPEIESIKEIFHCHPYSSSEKGSIENAHRLLRRYIPKGKSIDKYVGQDLKPIADFINSHPRIYKGVSGFKCAKQMQ
>NZ_CP022586.1|WP_078086165.1|613631_614660_+|IS30-like-element-ISMbov1-family-transposase
MKTVSNIVGFKSRSIYNLFDRITIETKRGYAKYQKKCKLCGMDLKGKTIYVISALKFLNLIETRHDSKRLENNSKLLMKYIDIFKFYKQLLYFYLKNRNSFNLDSKAVKQSVASIIFKYIRELEAQGKLQNSYIPSVQNFYRILAKHSAFGLKLDILPYKSNGKYGSRTTVKHETKKKTIGKLITERPESVNLRLNDNDYEMDTVIGLRSDNYCILTLINRKSRMFYCTLSRRNAKAIKENLEKLIKDNNLVIDTLTIDNGSENYKLPEIESIKEIFHCHPYSSSEKGSIENAHRLLRRYIPKGKSIDKYVGQDLKPIADFINSHPRIYKGVSGFKCAKQMQ
>NZ_CP022586.1|WP_115266428.1|611645_613010_+|FAD-dependent-oxidoreductase
MKIILVGANHAGTSFIRTVKTVNKDVQITAYDRNTNVSFLGCGIAVWVGGEFSQPDGLFYSSPDILRDKYGVDLKTEHEVIKINKDKKEVVVKNLKTGEEFTDSYDKLVFAGGTWPIEPKIPGIEYNNIVLSKLFQHAQHLVELANNDKIKNVVVVGAGYIGIELTEAFWQKGKNVTLIDNNPRVIGNYFDPEFTDIMETNIKKDGVKLALGEMVKEFKSVNGKDVSSVVTDKGEHSADLVIMSVGFRPRTEMVEAEKLPNGTIKVNDFQQILGDENIYVIGDSSAIKHSVTGNHAHVALATNAVKTGVVAALHIAGLNIPFPGVAGTNAINVFGCHYTSTGFTEEAARRNGLTDVASVYFEDFDRPEFMSTSEKVACKIVYDTKTLKLVGAQIGSWGNAIHTETIFMLALAIQKGLTLPEIALTDVYFLPHFNKPFNFVLVPILKALGIDYKY
>NZ_CP022586.1|WP_115266427.1|610749_611535_+|Nif3-like-dinuclear-metal-center-hexameric-protein
MLILKISNYLLKKYILENKEEWDPAGWALHFKLNRRIRGVVVALDLTPAVLEKALSSDSNLIVTHHPFKFYETWEEEFEYAPYKKKIFEALNENRINVLCLHTNYDNYKYGTSYQIAKRLDLSENISHFENTNYPVAIKDVNLPLSNIINAIKQQLNLSQMRTNILNEDINNKIINNIAIFAGSGSISEINKVSSDYDLIITSDVKWSDWLTYSELQTPILEISHLSEQAFVYDIYSQLKETFPDRNISMVEINKEPYSNI
>NZ_CP022586.1|WP_013954706.1|609215_610745_+|RNA-polymerase-sigma-factor
MSKKSELRATVKLIKSHLKNLGKATLTQEEVYEYLDSIKVEVPDDDMDIMLELLLEENILADDFDDGDASFVNSDDIMDEVDAEKSMNKDDQSKGYDDGYSSKMQLKSNETEELEDDSDYSKLIRNYSDNSYDSYEDESEEFMVMDDDYHDSSYDEDDEDDEIVYKTDDKDQVTAKAKRGRKPKTKLNLDTLELEDFSAEEIDLSANLSVKKEDLKNKLTETNDIVKWYMRWIGKYGKLLQPEEEFELATEMDKGGFRGKRARDKLIKRNLRLVINNAKKYKNRGLSFIDLISEGNSGIIKAVQKYNVNKGFKFSTYATWWIRQAITRAVADQSRTVRVPVHMVETINKITKIERELQQENGVDPTDEEIAQRYGNDFTAEKVRHIRKINIDPISLDKQIGKENDSSFSDFVKDESVVNPVEYASHEELVETLNTILKDTLDADEYELICKRYGVGFDNNGEKYKVFSLEELALERNVSKERIRQIENKILRKLKSSPERSRYLKVFME
>NZ_CP022586.1|WP_115266426.1|607282_609223_+|DNA-primase
MSRVPNEIANNIISANDIVDVLRDFIELRKKGQSYVALCPFHNDTNPSMSIDSRRQIFKCFVCNTGGNALTFLKLFKKWSYAESLKYLADKAGIEFIIPDISINEYQNESKLSETDIKVYEVLDKANSFYKSELVKTDNPVIKAFLKNRNLSYNDCNKYDIGYAPIARFRDVFATEIENDLSILINASLVSLNTKEEFFKNRITFGIRDEYNKIVGFSARALDDSKPKYINSSENYYFKKSSILYNLNNIYESANFNQIIITEGFFDVIALNKCNIPEAICLMGTALTKEHVYKLQKFKKIILFLDGDDAGQESTFKTIKTLLQNNYTNIYVVKNNSNLDPDELLNTHGPEAVKSLINDASLYIYFIYDYLRIKFGLYDGYNIIEVNEMQFQKFGSEFYPFWLKLSQNAATVFNEKLKKEYNRDINFIIDKGNSFNNDFSTQDNINLNNYDEFYDVNSIPYYDDVVDSQNYNRVPNFSNPKLYKPVKQEYKQNWIEKMLLILLHYPNLQEFFYKNYSKFPFESIELNSNTLEFDKDLKAIYKKLINHTKISPEEANKIIQKFSEEGKDHFINKFHFSTRDIVQLEKDFAEIYKRARDDDLKRYNSYIVNDLGANSSGLEINNKIVKEILEKQRQNKLKMDDEDQNE
>NZ_CP022586.1|WP_115266425.1|605864_607241_+|glycine--tRNA-ligase
MNNKDKNMSNIINHLKATGFVFQGSEIYGGLSNTWDYGPLGSLLKENIKDLWKKEFIYSEHNNFLIDSKILMNPKVWVTSGHVSNFNDPLIENKVNGKRYRADKIIQEIDPSLVPESMTFEQMHDYLSKNVSEYDGSKCTWSEIRKFNLMFETKQGIIEGEKNLIYLRPETAQGIFVNFKNVLRSTRAKLPIGIGQVGKSFRNEVTPGNFIFRTREFEQMELEVFHDPKDSDFLFNKYLYKAKDFATLLGIKDENVRIRAHEQDELSHYSSATSDIEYLFPFGWGELLGVANRTDFDLKAHMQATGESLEYFDPVTNSKLIPFVIEPSIGLDRLMLALLIDSYDEEAISENDSRIVLRMPNSVAPYKFAILPLVKKLNDKAEEIYKELLKLNIAITYDDAGSIGKRYRRQDSIGTPYCITVDYDSLNDECITIRNRDSMLQERISISELYNLAKNYFK
>NZ_CP022586.1|WP_115266424.1|603959_605753_+|hypothetical-protein
MKRLNCTYEIKQDNNFPWLLKHPKVKKGLAKFKTREEALNWYMLLDYETAVWFQDNQKIFAGQLTIDYEDGEWYYYIKTKDFDGDATYDGVCHELGINPYNYKRDRDAEIKKGKKLVEGRDYILISDPATYFPLNLEISKRKRKDVVDIEHMKVQYETKILSLQEQINSNDEHISEELKQSREELAKKELELKEISNKINLLKQNTLSRQEVKYVQFIELKGSDIFGATALYNDKIKKAIESLDNKKISWDDFNRIKKNFSDFESSIIYKKSRMSDKGLRLISILYDEFKTVSIELLSKLEPIDDLDDSFANRAFYKGSEGKLISVSWELSFVLVEFMHVGFVPEDEYAYSIPYLVERSKYLVTLIDAGDNNKIVTFQPGLEQTSEIELDEAKEDVVETKTVQLSEKVEIKEEIKKPTLIYYELAKPEPIAEPEPVAVAEEKTEVVPEVSEPTEVKETTIIIYNLVKEEPAVEKVDAPVTVAEEDEVKEASVIPVVVEEKPVEVEEVETIKPVENQPYFYEDRVASNVAIEDYTLPAEEQMPAVTKDEAKEKGTVAKKNILFYVAVTLLVLLIIAIVTISILGIVHLTTDIKFFKSL
>NZ_CP022586.1|WP_115266423.1|602153_603509_-|ABC-transporter-substrate-binding-protein
MKKMNLIAMAGGLSFLTASPLLAISCGNTSPYQNTVVDEKKEDIAKSWDKEISITNGWINNGFLNTKLETDFLDLLGKRFNDLKNKDSKTKDLPDVKFVIKTDEEGKYFTKLTSNNKANDLYISNYTQYIDELWKDGKFNEKFAPKLVSQASTLKFTWSSDDNDLYSDGSSKDKLRLHADKNNVKWTKELGKEYPEWHEITGEGKKLHFDGSKYTNFYEKKDVTYIYHGAVYISGNKATRDAIVKAWNEKKWDDFYKHGISFEKTSSAGKYKYQVALFARHFGKTIQEINKFLTENDEYVVRGKSAKDSLGKETEDKTGKKKLTPHISFDDEGAYNWTLSKKTSTKYRPSKFNEGKSYDDAENDVVRVLTLTNPAPYDMVLARVGLSNTQVNLISKALQSLSLTENTYGIYSGYNKFQPLNKELLEILTKFQVRAESKQDFEGLKVVSPKA
>NZ_CP022586.1|WP_115266422.1|601218_602151_-|ATP-binding-cassette-domain-containing-protein
MSKVIELKGIYAKYNKKSDFILENLNLDVNEGEFIAIIGPSGVGKSTLFKVLVNAINVSKGEIKIFGQNIYKKSVKDNKLTDNKLTETHKKLDNKSSYDSNLAPDNHFSESVDDENKNTNSKTKKGIFNSEKLFLKRQKKKIMTRIGFLTQKPNLINTENVYNNIIRSISQYENWFYKLFSIITKKQKINIFSKLDELGILDKAFYKVSDLSGGQQQRVEIAKLLVKNVDLILADEPTSNLDRQNSLEVLAILREISKQGKTIIVNIHDLGLVKENFDRVIAIKNKTIVFDKLTKDVEQCELNQIIETKT
>NZ_CP022586.1|WP_013456509.1|616414_616918_+|dUTP-diphosphatase
MNLKKIFEMQKDLDKAIISRNDIDASNSKISQAEFDEMKLLATLVETAEFANEVQSFKYWKANKSINREKALEEFADMLHFVGSFAYKYNVDPDIEPLILSDNVNKQICLLFSTISSAINNLNKYVISQMLAIALGVAKLLNYSEDEIIHWYYIKNKKNYERIKEKY
>NZ_CP022586.1|WP_115266429.1|616941_618795_+|peptidase-S41
MKKIIKKLSISFLPLLTAPLIAAKCFGNSITTTNQNYTVERHTFVNAVKDYEHIGKEGIDTYYFNNDRIPYVSVKQALSALEGVVNTKLIKIGNAFNVLHNKNYQIYHANGASLKFNWENNVIEISDPRVFGILSGKKSIGIMHNLTPLSFKSTYINDKPQSIKFDLSKYNWKIHAVNKEPIIPLFVFNLLFLSQNYYNLRFNGSEYYGVDINTIIRTSPNALSELTNKFKINPETSVQRQDAFQSLRFVFDNFYGLAEEKKIDKVGFESWLDPSIKKDILNRDPLIYNKGYFKALHGQVNELHTSVRQFNYYTPLEYTDTNYIRSLVKHSLDEYKNKVDPKFNSKWLNAGQLRSKLNALRESAQYYDDSESRRLLKVSQTINGLRLVEGNVPVVRFLPDNKSAVITLDSFSAASPEENYIFDSLELMKYALDVIERRSIVTGNKINNIILDISQNGGGNVAALYKLIGLIKGKQDRKAYSYSFNTLTKTLEESLYRAEIPNKYLDKNYKWFLLTSNLSFSAANALVAYTAADKSSPSSRNVQIIGQRTGGGACAIIPIVLSDGTMIVVSSNTKIMTKSNDKHYVSVENGFEVPDKYKLNYEDFYNDHALAELVSKK
>NZ_CP022586.1|WP_115266430.1|618826_619723_-|elongation-factor-Ts
MDKMALIKELRERTAAGMSDCKKALEASNWDVEEAISFLKKNGKIKAASKANRVSADGLLVEAGDSNRAVLVELNCETDFVAHGDEFVALANTVAKTIVANYELVKENGAEAALALKAEGSDESLADLISSYSAKCGEKIELRRFALIDAGTGQSVSTFVHINGKIGAILLTNGVNAEAARNVAMHLSAMNPEYIFADDIPSYVLERFASEFKEPAGFENKPEKIQETIRKGFVDKKISEVTLLSQRLIMDESKTVEQYLKDNKLSLIKAIRFGLGEGIEKKETDFAAEVAEQMNKSM
>NZ_CP022586.1|WP_115266431.1|619772_620726_-|30S-ribosomal-protein-S2
MENENLKVEQATTAESNMAEKADDSKASKEVKPTIVSREKLLEAGTYFGHKKSMWNPKMKEFLYPQSKRGMHMINTNVTLQRLEFAYNILNKFVAKNPRTTFIFVGTKKQAKDTIKENALRTGSFYVSERWLGGILTNASTIFKRVKVMEELEAQAAKKFQGYTKKEGLIKQKELDKLHKNLDGIRKMQSLPSFMIVADPNVDAIAVKEARSKGVKVIGILDSNSNPDAVDFGIPANDDSAKSITLIMTILADAIATARGGKAKFAYQGDDKVILPEFKTDRVQNPRFVNQRRSFEQTGGQTVRNVEKTTTSAEVTE
>NZ_CP022586.1|WP_013456029.1|621286_622699_+|IS1634-like-element-ISMbov2-family-transposase
MAIPKDILKIPRPSSTRVKATSKEGIYNVIQRTSIRKNEKIIPVEKGVIGKIINGVFQSIEKQTYEVDIKSYGLFALNEKLNNHIFRELLNFYDFEDARKLYVIASLRTMFSDIKNEHLKHEYDTNFISEIYPKCALSPNTISSFLEKIGKSSSKMEDFMNKRLEEFSNHSIVIDGMLKNNTSETNIFSEMSRKSRTKGAQNLNLIYAYDINAQEPVASSVYPGNMLDYTAFRDFLRTYKIKNGFLILDRGFDDKECKNLMREKNIKYLMPIKINHTFKKFNLKSGFNFTFTYDDDTIRAKKIIINNKYYLCYKSTLTEMVEKKNFISRAHKKGAYDEIKLLERENLFGLIIFECNYDLDLKDIYVAYKKRWEIELLFKQFKNVLEQNEANVQGNYRLLATEFINFLSSIMLCRIKNHLLNSGVLDNRTISETFRYLSKIIKKRKSRKREEWDDVETLKYIKELKSILKI
>NZ_CP022586.1|WP_115266432.1|622719_623541_-|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase
MLSSTTPSPFVKWAGGKRQLLEEILNKIPSEFNNYYEPFVGAGALLFSLKYNQVSYVNDINKSLIHTYKIAKDSPNELIDKLNELDNKFTSKSDYYECRNLFNEMIQKGNYDVLHAALFIYLNKRCFNGLYRVNSKGLFNVPFNNKENIRSFDKDNILKASEWLQNKVITSTDFEMAVKTASKGDFVFFDSPYAPLNNSTFTSYAKDGFTLDDHKRLAKVFKELDKRGCYLMLTNHNTELIRDLYKDYYITVIKVKRLINSNANKRVGEEVII
>NZ_CP022586.1|WP_115266433.1|624060_625422_+|variable-surface-lipoprotein
MKKNKLLLSLGSLSIFSAIPFIAAKCDITEAKDNSSKEPGTTNPGTTEKESAKVDLDKLSDKVKEELNKLAKEKVTKEEVVAVLKTEKGLEKLTAEDLTKVEFKDNKLTIEAHKESKLVSGTYVFDAQVQPPKTDSVIDLSTLQLNADVKKALKIEAKINPDKKKIIEAFKKDNNFAKLTEDDFEATFKDTILTIKSKPESTVIKGELQVHTKTELDNVTLTENIKKELQAELQEESFNAEEIVKVLKKLPELKDLDTKKAEFKKENNKLLVTAKKESTKFTGSLSFIFKVALDKAVVKDIKNELSSEVKKDPSMPHIVNILKKIPGLVTISANDVKVEFKDNKLVITAMDKSEIVMGSVSVEKSKDSAKINLSSYDFTEKDKKSILNALSESDDPEGDQIKSSVWFSLTTIFKGRGIEESDFEVTFDKEKKTLTIKASKETKKLEGEKTFNE
>NZ_CP022586.1|WP_115266434.1|625491_625719_+|hypothetical-protein
MLLEEFEDGINTMLSAQKLLKGIEELKNITLADIDDKIETEKESSEKDVFKKVTIKAGSTSKLISGTLVIEKKDK
>NZ_CP022586.1|WP_075271012.1|625743_628053_+|leucine-rich-repeat-protein
MKLKKIFNKYIAIVPALVTITLIAAKCEYDPGVKVFYDLNQLRLEAVEKESLELIDNYEKNITKFWSDRQALNELKKLAAKVREIENKAEQELKEYSEPAKAKVEHEDSDEKDSSVLTAKKALAKFDRSATEIKIPSEFTKIGKNAFNNFYNLGKIEFHDNVTEIRQGAFDNTDLDSVTLPKNLKVLGGFANTYIKTLEIPQSVTKILQGSFDNTNIGTIKLPEKLTELGGFKATGISELKLPESLTKIYENSFDETPITKLKLNKNLKILGGFNTLRNLEEFEFNDQLEEILDESFLNFNLTSLKLPNSLKILGGFQQSNITDLSLNEGLIEIKPNSFAESKGIKRLSLPQSLKKLGGFQGTNILALRLPKGLESISKNAFDKTIITDLDLPEGLVSFGGFAESQISEIKFPKSLLHIEPNTLDFKKARNKEYKLELPEKLISFGGFKNWNISEIKFPETLRDIWAETLDYSKISELNLPSNLNSFGGFAGTKIKSIQFPESLKIIHQNTLDETKISEIRLPNKLEVLGGFANTPITKLSTPKSLKTTLKETFRNSKLNRIRFNKGLIELAGFENLVDIDAITLPETLLEIKDGAFANNRLKEIKLPSHLKVLSGFSGKSSEIKEVVLPESLEIIGNSTFNFNDHITSVKLPSKLIEVSGFSSTNIRELDIPESVIKLGGFNQTLIRNLKLPDNLESFEGFHESKIKKLVFPKFLRFADISKSHWKSLETIDVYSKYLVKSKWWNNMKEDDYNQLIKLVDKTNSRRDK
>NZ_CP022586.1|WP_115266435.1|628055_629894_+|leucine-rich-repeat-protein
MKKFSFVLLPILTFPAIAAACDNKDKATKNPDNQDQSASEIQKLKDELQYEITKATSKRNHYLGDYTDYAFNQSAKVIQEAVYVHHNAKTVEEVKKAIEKLKAGIKEIDAYFALSKEEKQKLARKDFNKALVAAKEAKAKLTKPSAIEVLDDSIAKAESNKEGDPHYFTNLLKWTYKSKKDIEEAQKLEEKSDKELLKLYLSKESNILNTFNREYNASGSFDEQAEKLKEIFKKANENKKEDYRDQEVKLRKEISEILEKISKEAITPSKANELAKLVKNGELIIGDDYKYILSDAFADNKKIKKVTLGKKIEKIERGAFDNSGVETITFNENLKSLEGFNNTKVKELTLPKKLEKFAAFNSTKITKLLLPKTLKSFALSSTFLEELEFESDFKFDTVSPDSYYDSIAINQQLLPSLNKIYVSDGSAKKNLLEKLNKNITESKKIKLGEDYIKFLAYIVNVKIVKKFASITEDKKKKIIEALLESSIKKEETKKTKSGIEKIVADLKSENLKDTLEKVLDSYKYEKISAKNKFEVFDAAIEMLKDILRAYGFYLKTETIKNDPDLKQYHHETGVTPGEIINYFDSEKEKYENGKNGSDSNQWENIVQVKPKK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP022586_3	3.1\|616257\|53\|NZ_CP022586\|CRISPRCasFinder	616257-616309	53	NZ_CP022586.1	112853-112905	0	1.0
NZ_CP022586_3	3.1\|616257\|53\|NZ_CP022586\|CRISPRCasFinder	616257-616309	53	NZ_CP022586.1	438073-438125	2	0.962
NZ_CP022586_3	3.1\|616257\|53\|NZ_CP022586\|CRISPRCasFinder	616257-616309	53	NZ_CP022586.1	744756-744808	2	0.962
NZ_CP022586_3	3.1\|616257\|53\|NZ_CP022586\|CRISPRCasFinder	616257-616309	53	NZ_CP022586.1	886822-886874	2	0.962
NZ_CP022586_3	3.1\|616257\|53\|NZ_CP022586\|CRISPRCasFinder	616257-616309	53	NZ_CP022586.1	468212-468264	2	0.962

1. spacer 3.1|616257|53|NZ_CP022586|CRISPRCasFinder matches to position: 112853-112905, mismatch: 0, identity: 1.0

ttttttattcttttggctattctcttgtcagaaccaccaaaaattggtattat	CRISPR spacer
ttttttattcttttggctattctcttgtcagaaccaccaaaaattggtattat	Protospacer
*****************************************************

2. spacer 3.1|616257|53|NZ_CP022586|CRISPRCasFinder matches to position: 438073-438125, mismatch: 2, identity: 0.962

ttttttattcttttggctattctcttgtcagaaccaccaaaaattggtattat	CRISPR spacer
ttttttattcttttagccattctcttgtcagaaccaccaaaaattggtattat	Protospacer
**************.**.***********************************

3. spacer 3.1|616257|53|NZ_CP022586|CRISPRCasFinder matches to position: 744756-744808, mismatch: 2, identity: 0.962

ttttttattcttttggctattctcttgtcagaaccaccaaaaattggtattat	CRISPR spacer
ttttttattcttttggccattttcttgtcagaaccaccaaaaattggtattat	Protospacer
*****************.***.*******************************

4. spacer 3.1|616257|53|NZ_CP022586|CRISPRCasFinder matches to position: 886822-886874, mismatch: 2, identity: 0.962

ttttttattcttttggctattctcttgtcagaaccaccaaaaattggtattat	CRISPR spacer
ttttttattcttttagccattctcttgtcagaaccaccaaaaattggtattat	Protospacer
**************.**.***********************************

5. spacer 3.1|616257|53|NZ_CP022586|CRISPRCasFinder matches to position: 468212-468264, mismatch: 2, identity: 0.962

ttttttattcttttggctattctcttgtcagaaccaccaaaaattggtattat	CRISPR spacer
ttctttattcttttggccattctcttgtcagaaccaccaaaaattggtattat	Protospacer
**.**************.***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022586_1	1.1\|372597\|37\|NZ_CP022586\|CRISPRCasFinder	372597-372633	37	KR131711	Fusobacterium phage Funu2 supercont1.1, partial genome	454-490	10	0.73

1. spacer 1.1|372597|37|NZ_CP022586|CRISPRCasFinder matches to KR131711 (Fusobacterium phage Funu2 supercont1.1, partial genome) position: , mismatch: 10, identity: 0.73

aatgaggaaaatcaaaaaaatgaataaatgccccaca	CRISPR spacer
gcaatggaaaatcaaataaatgaataaaagcccagct	Protospacer
.  . *********** *********** **** .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

73512 : 84873

Bodo_saltans_virus(28.57%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013954527.1\|73512_74493_+	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	3.9e-15	27.1
WP_115266292.1\|74496_75318_+	alpha/beta fold hydrolase	G9E3U1	Emiliania_huxleyi_virus	3.9e-08	32.5
WP_115266293.1\|75401_76166_+	hypothetical protein	NA	NA	NA	NA
WP_013456612.1\|76158_77139_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.8e-52	40.3
WP_115266294.1\|77263_81640_+	PolC-type DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	8.1e-12	31.8
WP_115266295.1\|82045_83269_+	AAA family ATPase	A0A127AWE7	Bacillus_phage	1.5e-61	35.1
WP_115266296.1\|83258_84224_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	3.6e-29	40.9
WP_013456493.1\|84213_84873_+	uracil-DNA glycosylase	A0A068EP41	Falconid_herpesvirus	1.6e-28	36.4

DBSCAN-SWA_2

365822 : 442441

Faecalibacterium_phage(26.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080551570.1\|365822_366851_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013455983.1\|367444_368407_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_013456269.1\|368590_369649_+	site-specific DNA-methyltransferase	S4VS49	Pandoravirus	2.8e-19	29.4
WP_078086167.1\|369875_371477_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013456160.1\|371610_372318_-	MjaI family restriction endonuclease	E3SIW0	Synechococcus_phage	2.6e-21	35.1
WP_174245809.1\|372422_372623_+	hypothetical protein	NA	NA	NA	NA
WP_115265600.1\|372623_373808_+	DUF285 domain-containing protein	NA	NA	NA	NA
WP_013456339.1\|374022_374844_-	DNA-binding protein WhiA	NA	NA	NA	NA
WP_013456083.1\|374932_376120_-	phosphopentomutase	NA	NA	NA	NA
WP_013456498.1\|376253_377501_-	hypothetical protein	NA	NA	NA	NA
WP_013455970.1\|377636_379601_+	NAD-dependent DNA ligase LigA	Q332J4	Clostridium_botulinum_C_phage	3.9e-83	31.7
WP_075271152.1\|379786_381997_+	putative immunoglobulin-blocking virulence protein	NA	NA	NA	NA
WP_075271115.1\|382029_384639_+	hypothetical protein	NA	NA	NA	NA
WP_075271114.1\|384713_386942_+	putative immunoglobulin-blocking virulence protein	NA	NA	NA	NA
WP_075271112.1\|387137_389387_+	putative immunoglobulin-blocking virulence protein	NA	NA	NA	NA
WP_075271146.1\|389416_391993_+	hypothetical protein	NA	NA	NA	NA
WP_075271110.1\|392046_393558_+	hypothetical protein	NA	NA	NA	NA
WP_075271108.1\|393544_394042_+	DUF2714 domain-containing protein	NA	NA	NA	NA
WP_075271107.1\|394041_394962_+	hypothetical protein	NA	NA	NA	NA
WP_075271106.1\|394961_395426_+	hypothetical protein	NA	NA	NA	NA
WP_075271104.1\|395415_397659_+	hypothetical protein	NA	NA	NA	NA
WP_041309119.1\|397662_399237_+	ATP F0F1 synthase subunit alpha	NA	NA	NA	NA
WP_013456309.1\|399236_400616_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_013456496.1\|400638_401709_+	hypothetical protein	NA	NA	NA	NA
WP_115266350.1\|401727_404118_-	hypothetical protein	NA	NA	NA	NA
WP_013456170.1\|404273_405164_-	DegV family protein	NA	NA	NA	NA
WP_013456573.1\|405205_406852_-	hypothetical protein	NA	NA	NA	NA
WP_115266351.1\|406866_409071_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	6.2e-93	35.1
WP_013455988.1\|409095_409764_-	hypothetical protein	NA	NA	NA	NA
WP_013456111.1\|409765_410770_-	glycosyltransferase	NA	NA	NA	NA
WP_115266352.1\|410779_412141_-\|tRNA	asparagine--tRNA ligase	M1PB22	Moumouvirus	1.6e-67	34.0
WP_013456505.1\|412504_413266_+	membrane protein	NA	NA	NA	NA
WP_013456102.1\|413415_413736_+	hypothetical protein	NA	NA	NA	NA
WP_013954838.1\|413738_414317_+	DNA integrity scanning protein DisA nucleotide-binding domain protein	NA	NA	NA	NA
WP_013456233.1\|414320_415781_+	magnesium transporter	NA	NA	NA	NA
WP_013456142.1\|415869_416172_-	hypothetical protein	NA	NA	NA	NA
WP_013456043.1\|416171_416735_-	elongation factor P	NA	NA	NA	NA
WP_013456488.1\|417067_418006_+	hypothetical protein	NA	NA	NA	NA
WP_013456600.1\|418172_419990_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.5e-36	24.9
WP_115266353.1\|419982_421779_-	ATP-binding cassette domain-containing protein	Q6GYZ6	Mycoplasma_phage	2.4e-34	44.7
WP_080551570.1\|422034_423063_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456055.1\|423450_425394_-	hypothetical protein	NA	NA	NA	NA
WP_013456447.1\|425430_426360_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_115266354.1\|426449_426725_-	Smr/MutS family protein	NA	NA	NA	NA
WP_115266355.1\|426708_427548_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	1.1e-26	34.1
WP_115266356.1\|427549_428842_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_115266357.1\|428843_430094_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_013456131.1\|430107_430440_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_115266358.1\|430577_431942_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	7.6e-126	54.4
WP_115266359.1\|432338_433529_+	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	7.5e-29	25.9
WP_115266360.1\|433720_434125_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_115266361.1\|434124_434682_+	hypothetical protein	NA	NA	NA	NA
WP_115266362.1\|434683_435613_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.5e-51	36.6
WP_115266363.1\|435637_437509_+	hypothetical protein	NA	NA	NA	NA
WP_115266364.1\|437571_437943_-	PTS transporter subunit EIIB	NA	NA	NA	NA
WP_115266507.1\|438187_439216_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.9e-20	32.9
WP_115266365.1\|439675_441091_+\|transposase	IS1634-like element ISMbov2 family transposase	NA	NA	NA	NA
WP_115266508.1\|441412_442441_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.5e-20	32.9

DBSCAN-SWA_3

584638 : 651480

Faecalibacterium_phage(23.53%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013456122.1\|584638_586342_-\|tRNA	aspartate--tRNA ligase	A0A2K9KZX5	Tupanvirus	2.0e-14	23.1
WP_013456205.1\|586410_587727_-\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	2.7e-11	25.1
WP_115266417.1\|587965_589636_+	amino acid permease	NA	NA	NA	NA
WP_013456295.1\|589686_590142_+	Sua5/YciO/YrdC/YwlC family protein	NA	NA	NA	NA
WP_115266418.1\|590218_591547_+	hypothetical protein	NA	NA	NA	NA
WP_013456088.1\|591681_592008_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_013456362.1\|592027_592426_-	single-stranded DNA-binding protein	A0A0H3U4B5	Staphylococcus_phage	9.3e-08	30.3
WP_013456432.1\|592467_592905_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_174245815.1\|593271_595125_+	type I DNA topoisomerase	A0A2P1ELA0	Moumouvirus	3.7e-75	32.2
WP_115266512.1\|595269_596316_-	alcohol dehydrogenase catalytic domain-containing protein	A0A0K0KVL7	Prochlorococcus_phage	1.3e-13	26.6
WP_174245828.1\|596559_599073_+	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_013456114.1\|599153_599399_+	DUF2188 domain-containing protein	NA	NA	NA	NA
WP_115266421.1\|599503_601255_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_115266422.1\|601218_602151_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.4e-08	30.0
WP_115266423.1\|602153_603509_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_115266424.1\|603959_605753_+	hypothetical protein	NA	NA	NA	NA
WP_115266425.1\|605864_607241_+\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	1.3e-53	32.2
WP_115266426.1\|607282_609223_+	DNA primase	A0A1S5RFD7	Helicobacter_phage	9.7e-42	35.3
WP_013954706.1\|609215_610745_+	RNA polymerase sigma factor	G8CLC7	Synechococcus_phage	2.0e-29	33.7
WP_115266427.1\|610749_611535_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_115266428.1\|611645_613010_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_078086165.1\|613631_614660_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_080551570.1\|615067_616096_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456509.1\|616414_616918_+	dUTP diphosphatase	S6AVW3	Thermus_phage	7.4e-10	32.8
WP_115266429.1\|616941_618795_+	peptidase S41	NA	NA	NA	NA
WP_115266430.1\|618826_619723_-	elongation factor Ts	NA	NA	NA	NA
WP_115266431.1\|619772_620726_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_013456029.1\|621286_622699_+\|transposase	IS1634-like element ISMbov2 family transposase	NA	NA	NA	NA
WP_115266432.1\|622719_623541_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S5PRR3	Streptococcus_phage	2.3e-53	45.4
WP_115266433.1\|624060_625422_+	variable surface lipoprotein	NA	NA	NA	NA
WP_115266434.1\|625491_625719_+	hypothetical protein	NA	NA	NA	NA
WP_075271012.1\|625743_628053_+	leucine-rich repeat protein	NA	NA	NA	NA
WP_115266435.1\|628055_629894_+	leucine-rich repeat protein	NA	NA	NA	NA
WP_115266513.1\|629857_631945_+	peptidase S41	NA	NA	NA	NA
WP_013455951.1\|632056_633496_+	DNA recombination protein RmuC	NA	NA	NA	NA
WP_013456519.1\|633560_635171_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_013456216.1\|635163_636513_-	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-13	24.0
WP_013456029.1\|636736_638149_-\|transposase	IS1634-like element ISMbov2 family transposase	NA	NA	NA	NA
WP_115266436.1\|638606_639230_-	variable surface lipoprotein	NA	NA	NA	NA
WP_013456502.1\|639404_639704_+	PTS transporter subunit EIIB	NA	NA	NA	NA
WP_013456595.1\|639862_640771_-	BspA family leucine-rich repeat surface protein	NA	NA	NA	NA
WP_099620126.1\|641001_641322_-	hypothetical protein	NA	NA	NA	NA
WP_080551570.1\|642086_643115_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456244.1\|644696_645989_-	DUF21 domain-containing protein	NA	NA	NA	NA
WP_013456407.1\|645988_647464_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	7.9e-52	33.5
WP_013456489.1\|647453_647909_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_115266438.1\|647889_649890_-	DHH family phosphoesterase	NA	NA	NA	NA
WP_080551570.1\|650451_651480_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3

DBSCAN-SWA_4

660988 : 728621

Faecalibacterium_phage(26.32%)

transposase,tRNA,integrase

attL 673908:673967|attR 727432:728952

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013456468.1\|660988_661855_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_013456399.1\|661925_664292_-	membrane protein	NA	NA	NA	NA
WP_013456191.1\|664328_665291_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.5e-06	26.5
WP_013455950.1\|665271_665868_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_115266510.1\|666463_667492_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.8e-21	33.8
WP_115266443.1\|668350_670210_-	hypothetical protein	NA	NA	NA	NA
WP_075271156.1\|670404_671115_-	signal peptidase II	NA	NA	NA	NA
WP_115266444.1\|671116_673795_-\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	5.6e-80	27.4
673908:673967	attL	NA	NA	NA	NA
WP_080551570.1\|674068_675097_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456530.1\|675568_677188_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.0e-108	39.8
WP_080551570.1\|678227_679256_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_115266445.1\|683802_685110_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_115266510.1\|685265_686294_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.8e-21	33.8
WP_013456290.1\|686978_687776_+\|integrase	tyrosine-type recombinase/integrase	A0A0H4TI16	Erysipelothrix_phage	1.5e-20	29.3
WP_115266446.1\|688106_689165_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_115266447.1\|690170_692441_-	S8 family serine peptidase	NA	NA	NA	NA
WP_013954662.1\|692442_693486_-	AAA family ATPase	A0A2H4UTU5	Bodo_saltans_virus	9.9e-09	29.0
WP_115266448.1\|693958_695392_+\|transposase	transposase	NA	NA	NA	NA
WP_013456032.1\|695537_697763_+	AAA family ATPase	A0A2K9V9X6	Bandra_megavirus	3.4e-30	26.6
WP_013455939.1\|698625_699288_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_013456585.1\|699274_700120_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_013456514.1\|700131_701130_-	serine/threonine protein kinase	Q85453	Moloney_murine_sarcoma_virus	4.3e-17	32.2
WP_013456579.1\|701147_701900_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_013456283.1\|701905_702493_-	guanylate kinase	A0A0M5KCK5	Mollivirus	1.2e-08	38.6
WP_013456572.1\|702835_703078_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_013456627.1\|703080_705270_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.0e-71	33.5
WP_075270989.1\|705290_706076_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_014829889.1\|706078_707629_+\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	1.9e-80	35.7
WP_013954656.1\|707650_707935_+	hypothetical protein	NA	NA	NA	NA
WP_013954655.1\|708003_709068_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_013456378.1\|709057_709294_+	hypothetical protein	NA	NA	NA	NA
WP_013456491.1\|709331_709817_-	thiol peroxidase	NA	NA	NA	NA
WP_174245816.1\|709990_710149_-	hypothetical protein	NA	NA	NA	NA
WP_004024364.1\|710282_710435_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_013954653.1\|710488_711187_-	hypothetical protein	NA	NA	NA	NA
WP_078086164.1\|711441_713043_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954652.1\|713204_713540_-	HIT family protein	B5LJ12	Mycobacterium_phage	3.6e-05	33.8
WP_013954651.1\|713539_714922_-	hypothetical protein	NA	NA	NA	NA
WP_013954650.1\|714933_717102_-	hypothetical protein	NA	NA	NA	NA
WP_013954649.1\|717195_717783_+	hypothetical protein	NA	NA	NA	NA
WP_013456603.1\|717896_718166_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_013954648.1\|718244_718799_+	inorganic diphosphatase	A0A1B1ISK6	uncultured_Mediterranean_phage	2.1e-21	39.1
WP_115266449.1\|718861_720808_-	transketolase	NA	NA	NA	NA
WP_013954995.1\|721958_723203_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_115266514.1\|723880_724600_+	hypothetical protein	NA	NA	NA	NA
WP_014829885.1\|724815_725802_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	2.2e-42	35.7
WP_101456663.1\|725785_726481_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_013456076.1\|726724_727054_-	hypothetical protein	NA	NA	NA	NA
WP_080551570.1\|727592_728621_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
727432:728952	attR	NA	NA	NA	NA

DBSCAN-SWA_5

742806 : 827304

Faecalibacterium_phage(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_115266450.1\|742806_744648_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_078086175.1\|744870_745899_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.8e-21	33.8
WP_013954624.1\|746504_746954_+	hypothetical protein	NA	NA	NA	NA
WP_041309277.1\|749437_750769_+	hypothetical protein	NA	NA	NA	NA
WP_013456363.1\|751402_752836_+	hypothetical protein	NA	NA	NA	NA
WP_115266451.1\|752950_754804_-	LppA family lipoprotein	NA	NA	NA	NA
WP_013456227.1\|755597_757916_+	S8 family serine peptidase	NA	NA	NA	NA
WP_013456262.1\|757885_759310_+	hypothetical protein	NA	NA	NA	NA
WP_013456072.1\|759816_762750_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	8.8e-87	34.0
WP_115266452.1\|762751_763669_+	5'-3' exonuclease	A0A0N7ACJ6	Bacillus_phage	9.6e-32	31.2
WP_174245829.1\|764129_765731_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_013456376.1\|765854_767897_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_013456179.1\|768061_770155_-	elongation factor G	A0A1B0RXH7	Streptococcus_phage	1.8e-54	25.2
WP_013456121.1\|770184_770655_-	30S ribosomal protein S7	NA	NA	NA	NA
WP_004024001.1\|770685_771099_-	30S ribosomal protein S12	NA	NA	NA	NA
WP_013456204.1\|771419_772637_+	hypothetical protein	NA	NA	NA	NA
WP_013456632.1\|772674_774288_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.4e-54	28.6
WP_013954980.1\|775588_775933_-	hypothetical protein	NA	NA	NA	NA
WP_115266454.1\|776064_776919_-	variable surface lipoprotein	NA	NA	NA	NA
WP_013456540.1\|777394_778783_+\|transposase	transposase	NA	NA	NA	NA
WP_013456369.1\|779217_781050_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-28	25.5
WP_013456008.1\|781060_782845_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.6e-30	26.3
WP_115266455.1\|783066_784536_-	hypothetical protein	NA	NA	NA	NA
WP_115266456.1\|785016_785262_-	YneF family protein	NA	NA	NA	NA
WP_115266457.1\|785287_786376_-	M42 family peptidase	NA	NA	NA	NA
WP_174245817.1\|786448_787696_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	3.8e-07	26.3
WP_174245830.1\|787864_789466_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_115266459.1\|789857_797870_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_115266460.1\|798025_802462_-	DNA-directed RNA polymerase subunit beta'	A0A076FGB9	Aureococcus_anophage	4.2e-48	23.5
WP_115266461.1\|802454_806090_-	DNA-directed RNA polymerase subunit beta	W8W1V4	Invertebrate_iridescent_virus	2.6e-48	26.8
WP_115266462.1\|806530_807193_+	hypothetical protein	NA	NA	NA	NA
WP_078086165.1\|807490_808519_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_115266463.1\|808727_809099_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_172792937.1\|809125_809620_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_078086175.1\|809960_810989_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.8e-21	33.8
WP_115266464.1\|811416_812166_+	leucine-rich repeat protein	NA	NA	NA	NA
WP_013456485.1\|812152_813622_-\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	4.0e-80	36.9
WP_013954990.1\|813775_814666_+	hypothetical protein	NA	NA	NA	NA
WP_013456434.1\|814710_816870_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_075271051.1\|817016_819185_+	AAA family ATPase	K4FB40	Cronobacter_phage	1.1e-107	34.4
WP_013954995.1\|820427_821672_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_115266465.1\|822832_823930_+	DNA adenine methylase	M1HGA9	Paramecium_bursaria_Chlorella_virus	6.5e-27	31.6
WP_014829976.1\|823911_824853_+	DNA adenine methylase	A0A1W6JN66	Lactococcus_phage	6.5e-52	39.9
WP_013954999.1\|824991_825282_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_013456497.1\|825285_825969_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_115266466.1\|825958_826309_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_013955000.1\|826464_827304_-\|tRNA	methionyl-tRNA formyltransferase	M4QRX9	Synechococcus_phage	9.1e-05	23.7

Anti-CRISPR protein detection

Acr_ID: NZ_CP022586.1|WP_013954999.1|824991_825282_+|30S-ribosomal-protein-S16

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP022586.1|WP_013954999.1|824991_825282_+|30S-ribosomal-protein-S16

824991_825282_+

96 aa aa

742806-827304

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP022586_3	Orphan	3.1\|616257\|53\|NZ_CP022586\|CRISPRCasFinder	616257-616309	53	744808-744756	2

1. spacer 3.1|616257|53|NZ_CP022586|CRISPRCasFinder matches to NZ_CP022586 position: 744808-744756, mismatch: 2

ttttttattcttttggctattctcttgtcagaaccaccaaaaattggtattat	CRISPR spacer
ttttttattcttttggccattttcttgtcagaaccaccaaaaattggtattat	Protospacer
*****************.***.*******************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022586

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information