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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP022894 Staphylococcus aureus strain 191 chromosome, complete genome 11 crisprs cas3,DEDDh,csa3,DinG,RT,WYL 10 3 11 2

Results visualization

1. NZ_CP022894
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_1 170208-170292 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_2 429998-430099 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_3 787384-787466 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_4 830171-830249 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_5 835626-835895 Unclear NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_6 897455-897536 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_7 984239-984320 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_8 1420868-1420952 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_9 2292137-2292217 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_10 2304458-2304543 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022894_11 2412500-2412580 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP022894_1 1.1|170234|33|NZ_CP022894|CRISPRCasFinder 170234-170266 33 NZ_CP022894.1 1693589-1693621 0 1.0
NZ_CP022894_4 4.1|830195|31|NZ_CP022894|CRISPRCasFinder 830195-830225 31 NZ_CP022894.1 295110-295140 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 170195-170216 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 295035-295056 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 295145-295166 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 660672-660693 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 786425-786446 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 897528-897549 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 1086531-1086552 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 1406321-1406342 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 1420855-1420876 0 1.0
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 1693697-1693718 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 170195-170216 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 295035-295056 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 295145-295166 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 660672-660693 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 786425-786446 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 897528-897549 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 1086531-1086552 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 1406321-1406342 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 1420855-1420876 0 1.0
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 1693697-1693718 0 1.0
NZ_CP022894_7 7.1|984263|34|NZ_CP022894|CRISPRCasFinder 984263-984296 34 NZ_CP022894.1 830170-830203 0 1.0
NZ_CP022894_7 7.1|984263|34|NZ_CP022894|CRISPRCasFinder 984263-984296 34 NZ_CP022894.1 1906605-1906638 0 1.0
NZ_CP022894_4 4.1|830195|31|NZ_CP022894|CRISPRCasFinder 830195-830225 31 NZ_CP022894.1 295055-295085 1 0.968
NZ_CP022894_4 4.1|830195|31|NZ_CP022894|CRISPRCasFinder 830195-830225 31 NZ_CP022894.1 1386440-1386470 1 0.968
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 1386361-1386382 1 0.955
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 1386594-1386615 1 0.955
NZ_CP022894_5 5.1|835662|22|NZ_CP022894|CRT 835662-835683 22 NZ_CP022894.1 2176812-2176833 1 0.955
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 NZ_CP022894.1 787375-787397 1 0.957
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 NZ_CP022894.1 787653-787675 1 0.957
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 NZ_CP022894.1 1086472-1086494 1 0.957
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 NZ_CP022894.1 1693580-1693602 1 0.957
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 NZ_CP022894.1 2401671-2401693 1 0.957
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 1386361-1386382 1 0.955
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 1386594-1386615 1 0.955
NZ_CP022894_5 5.3|835779|22|NZ_CP022894|CRT 835779-835800 22 NZ_CP022894.1 2176812-2176833 1 0.955
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 NZ_CP022894.1 787375-787397 1 0.957
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 NZ_CP022894.1 787653-787675 1 0.957
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 NZ_CP022894.1 1086472-1086494 1 0.957
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 NZ_CP022894.1 1693580-1693602 1 0.957
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 NZ_CP022894.1 2401671-2401693 1 0.957
NZ_CP022894_6 6.1|897479|34|NZ_CP022894|CRISPRCasFinder 897479-897512 34 NZ_CP022894.1 1693589-1693622 1 0.971
NZ_CP022894_7 7.1|984263|34|NZ_CP022894|CRISPRCasFinder 984263-984296 34 NZ_CP022894.1 1294321-1294354 1 0.971
NZ_CP022894_8 8.1|1420894|33|NZ_CP022894|CRISPRCasFinder 1420894-1420926 33 NZ_CP022894.1 1693589-1693621 1 0.97
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 842914-842944 1 0.968
NZ_CP022894_1 1.1|170234|33|NZ_CP022894|CRISPRCasFinder 170234-170266 33 NZ_CP022894.1 1605267-1605299 2 0.939
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 NZ_CP022894.1 984217-984239 2 0.913
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 NZ_CP022894.1 1605286-1605308 2 0.913
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 NZ_CP022894.1 984217-984239 2 0.913
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 NZ_CP022894.1 1605286-1605308 2 0.913
NZ_CP022894_7 7.1|984263|34|NZ_CP022894|CRISPRCasFinder 984263-984296 34 NZ_CP022894.1 1689215-1689248 2 0.941
NZ_CP022894_7 7.1|984263|34|NZ_CP022894|CRISPRCasFinder 984263-984296 34 NZ_CP022894.1 2870526-2870559 2 0.941
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 70386-70416 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 374984-375014 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 660727-660757 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 897790-897820 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 1087870-1087900 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 1406258-1406288 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 1605225-1605255 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 1693633-1693663 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 1899675-1899705 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 2401724-2401754 2 0.935
NZ_CP022894_11 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder 2412525-2412555 31 NZ_CP022894.1 2577269-2577299 2 0.935

1. spacer 1.1|170234|33|NZ_CP022894|CRISPRCasFinder matches to position: 1693589-1693621, mismatch: 0, identity: 1.0

tgggccccaacaaagagaaattggattcccaat	CRISPR spacer
tgggccccaacaaagagaaattggattcccaat	Protospacer
*********************************

2. spacer 4.1|830195|31|NZ_CP022894|CRISPRCasFinder matches to position: 295110-295140, mismatch: 0, identity: 1.0

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattgcc	Protospacer
*******************************

3. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 170195-170216, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

4. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 295035-295056, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

5. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 295145-295166, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

6. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 660672-660693, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

7. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 786425-786446, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

8. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 897528-897549, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

9. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 1086531-1086552, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

10. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 1406321-1406342, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

11. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 1420855-1420876, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

12. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 1693697-1693718, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

13. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 170195-170216, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

14. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 295035-295056, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

15. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 295145-295166, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

16. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 660672-660693, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

17. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 786425-786446, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

18. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 897528-897549, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

19. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 1086531-1086552, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

20. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 1406321-1406342, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

21. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 1420855-1420876, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

22. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 1693697-1693718, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

23. spacer 7.1|984263|34|NZ_CP022894|CRISPRCasFinder matches to position: 830170-830203, mismatch: 0, identity: 1.0

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgaaaagaaattctacaa	Protospacer
**********************************

24. spacer 7.1|984263|34|NZ_CP022894|CRISPRCasFinder matches to position: 1906605-1906638, mismatch: 0, identity: 1.0

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgaaaagaaattctacaa	Protospacer
**********************************

25. spacer 4.1|830195|31|NZ_CP022894|CRISPRCasFinder matches to position: 295055-295085, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattacc	Protospacer
****************************.**

26. spacer 4.1|830195|31|NZ_CP022894|CRISPRCasFinder matches to position: 1386440-1386470, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttccattgcc	Protospacer
*********************** *******

27. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 1386361-1386382, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

28. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 1386594-1386615, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

29. spacer 5.1|835662|22|NZ_CP022894|CRT matches to position: 2176812-2176833, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

30. spacer 5.2|835720|23|NZ_CP022894|CRT matches to position: 787375-787397, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

31. spacer 5.2|835720|23|NZ_CP022894|CRT matches to position: 787653-787675, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

32. spacer 5.2|835720|23|NZ_CP022894|CRT matches to position: 1086472-1086494, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

33. spacer 5.2|835720|23|NZ_CP022894|CRT matches to position: 1693580-1693602, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

34. spacer 5.2|835720|23|NZ_CP022894|CRT matches to position: 2401671-2401693, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

35. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 1386361-1386382, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

36. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 1386594-1386615, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

37. spacer 5.3|835779|22|NZ_CP022894|CRT matches to position: 2176812-2176833, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

38. spacer 5.4|835837|23|NZ_CP022894|CRT matches to position: 787375-787397, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

39. spacer 5.4|835837|23|NZ_CP022894|CRT matches to position: 787653-787675, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

40. spacer 5.4|835837|23|NZ_CP022894|CRT matches to position: 1086472-1086494, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

41. spacer 5.4|835837|23|NZ_CP022894|CRT matches to position: 1693580-1693602, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

42. spacer 5.4|835837|23|NZ_CP022894|CRT matches to position: 2401671-2401693, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

43. spacer 6.1|897479|34|NZ_CP022894|CRISPRCasFinder matches to position: 1693589-1693622, mismatch: 1, identity: 0.971

attgagaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
****.*****************************

44. spacer 7.1|984263|34|NZ_CP022894|CRISPRCasFinder matches to position: 1294321-1294354, mismatch: 1, identity: 0.971

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacaaagaatttcgaaaagaaattctacaa	Protospacer
********.*************************

45. spacer 8.1|1420894|33|NZ_CP022894|CRISPRCasFinder matches to position: 1693589-1693621, mismatch: 1, identity: 0.97

tgggccccaacacagagaaattggattcccaat	CRISPR spacer
tgggccccaacaaagagaaattggattcccaat	Protospacer
************ ********************

46. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 842914-842944, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

47. spacer 1.1|170234|33|NZ_CP022894|CRISPRCasFinder matches to position: 1605267-1605299, mismatch: 2, identity: 0.939

tgggccccaacaaagagaaattggattcccaat	CRISPR spacer
tggaccccaacaaagagaaattgtattcccaat	Protospacer
***.******************* *********

48. spacer 5.2|835720|23|NZ_CP022894|CRT matches to position: 984217-984239, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

49. spacer 5.2|835720|23|NZ_CP022894|CRT matches to position: 1605286-1605308, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

50. spacer 5.4|835837|23|NZ_CP022894|CRT matches to position: 984217-984239, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

51. spacer 5.4|835837|23|NZ_CP022894|CRT matches to position: 1605286-1605308, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

52. spacer 7.1|984263|34|NZ_CP022894|CRISPRCasFinder matches to position: 1689215-1689248, mismatch: 2, identity: 0.941

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgataagaaattccacaa	Protospacer
******************* *********.****

53. spacer 7.1|984263|34|NZ_CP022894|CRISPRCasFinder matches to position: 2870526-2870559, mismatch: 2, identity: 0.941

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacaaaaagaatttcgaaaagaaattctacaa	Protospacer
****** *.*************************

54. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 70386-70416, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

55. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 374984-375014, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

56. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 660727-660757, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

57. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 897790-897820, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

58. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 1087870-1087900, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

59. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 1406258-1406288, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

60. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 1605225-1605255, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

61. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 1693633-1693663, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

62. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 1899675-1899705, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

63. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 2401724-2401754, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

64. spacer 11.1|2412525|31|NZ_CP022894|CRISPRCasFinder matches to position: 2577269-2577299, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP022894_5 5.2|835720|23|NZ_CP022894|CRT 835720-835742 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP022894_5 5.4|835837|23|NZ_CP022894|CRT 835837-835859 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP022894_10 10.1|2304484|34|NZ_CP022894|CRISPRCasFinder 2304484-2304517 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
NZ_CP022894_10 10.1|2304484|34|NZ_CP022894|CRISPRCasFinder 2304484-2304517 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765

1. spacer 5.2|835720|23|NZ_CP022894|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

2. spacer 5.2|835720|23|NZ_CP022894|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

3. spacer 5.4|835837|23|NZ_CP022894|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

4. spacer 5.4|835837|23|NZ_CP022894|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

5. spacer 10.1|2304484|34|NZ_CP022894|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgcatatctttagctttatagcttttatatgct	Protospacer
******************** *.** .*  **  

6. spacer 10.1|2304484|34|NZ_CP022894|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgaataactttagctttattgttataaacagta	Protospacer
*** *** ****************   *** * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 398473 : 461434 71 Staphylococcus_phage(70.0%) terminase,integrase,transposase,coat attL 400009:400026|attR 416280:416297
DBSCAN-SWA_2 765503 : 773324 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_3 788113 : 801776 13 uncultured_Caudovirales_phage(50.0%) transposase NA
DBSCAN-SWA_4 852628 : 869590 24 Staphylococcus_phage(81.25%) terminase,integrase,transposase,coat attL 854000:854015|attR 861398:861413
DBSCAN-SWA_5 977835 : 1062520 107 Staphylococcus_phage(90.79%) integrase,tail,protease,transposase,portal,capsid,holin,terminase,head attL 989531:989548|attR 1014069:1014086
DBSCAN-SWA_6 1122515 : 1232347 102 Staphylococcus_phage(92.86%) tRNA,protease,transposase NA
DBSCAN-SWA_7 1362238 : 1371281 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_8 1900584 : 1985507 108 Staphylococcus_phage(71.23%) tail,transposase,portal,capsid,tRNA,holin,terminase,plate,head NA
DBSCAN-SWA_9 2037311 : 2045784 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_10 2065782 : 2119510 54 Streptococcus_phage(28.57%) bacteriocin,tRNA,protease,transposase NA
DBSCAN-SWA_11 2744955 : 2774104 29 Streptococcus_phage(69.23%) integrase,transposase attL 2766907:2766926|attR 2774947:2774966
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP022894.1|WP_000642492.1|1978440_1978650_+|hypothetical-protein 1978440_1978650_+ 69 aa aa NA NA NA 1900584-1985507 yes
NZ_CP022894.1|WP_023487065.1|1978797_1979241_-|hypothetical-protein 1978797_1979241_- 147 aa aa NA NA NA 1900584-1985507 yes