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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP026130 Klebsiella pneumoniae strain F1 chromosome, complete genome 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 13 0
NZ_CP026131 Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence 0 crisprs RT 0 0 4 0

Results visualization

1. NZ_CP026130
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026130_1 4574001-4574095 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 451072 : 484330 34 uncultured_Caudovirales_phage(75.0%) capsid,tail,integrase,head,portal,tRNA,protease,terminase attL 468680:468697|attR 484675:484692
DBSCAN-SWA_2 1226321 : 1275465 63 Salmonella_phage(80.0%) capsid,tail,integrase,transposase,lysis,plate,head,portal,tRNA,coat,terminase attL 1225979:1225995|attR 1252938:1252954
DBSCAN-SWA_3 1380181 : 1432924 57 Salmonella_phage(40.0%) tail,transposase,integrase,holin,terminase attL 1373516:1373530|attR 1403621:1403635
DBSCAN-SWA_4 1763121 : 1770027 6 Planktothrix_phage(33.33%) tRNA NA
DBSCAN-SWA_5 1810762 : 1826508 16 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_6 2793632 : 2803046 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 3026069 : 3069011 63 Klebsiella_phage(33.33%) terminase,integrase,transposase attL 3060124:3060138|attR 3066133:3066147
DBSCAN-SWA_8 3101943 : 3132987 42 Enterobacteria_phage(35.48%) holin,integrase,transposase attL 3101725:3101740|attR 3130293:3130308
DBSCAN-SWA_9 3260659 : 3348538 96 Klebsiella_phage(44.19%) capsid,tail,lysis,integrase,head,portal,tRNA,terminase attL 3287462:3287476|attR 3346349:3346363
DBSCAN-SWA_10 3564881 : 3657832 97 Salmonella_phage(57.63%) capsid,tail,lysis,plate,integrase,head,portal,tRNA,protease,terminase attL 3620407:3620425|attR 3657907:3657925
DBSCAN-SWA_11 4310705 : 4322358 15 Enterobacteria_phage(70.0%) integrase attL 4310557:4310570|attR 4314770:4314783
DBSCAN-SWA_12 4790604 : 4800129 12 Enterobacteria_phage(85.71%) transposase NA
DBSCAN-SWA_13 4986777 : 5027198 36 Salmonella_phage(15.38%) integrase,transposase attL 4976969:4976984|attR 5006188:5006203
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP026131
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5197 : 19003 18 Enterobacteria_phage(18.18%) transposase NA
DBSCAN-SWA_2 48770 : 57953 12 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_3 73092 : 85483 12 Escherichia_phage(55.56%) transposase NA
DBSCAN-SWA_4 137135 : 151763 14 Escherichia_phage(50.0%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage