CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP043385	Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid p2_045001, complete sequence	0 crisprs	NA	0	0
NZ_CP043382	Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 chromosome, complete genome	2 crisprs	cas3,csa3,DinG,WYL,DEDDh	1	7
NZ_CP043383	Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid pNDM1_045001, complete sequence	0 crisprs	NA	0	2
NZ_CP043384	Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid p1_045001, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043382_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043382_1

1041860-1041974

Orphan

Consensus_repeat	Method
CCCTCTCCCTGTGGGAGAGGGCCGGGTTGAGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043382_1

>merge|NZ_CP043382|1|1041860-1041974|CRISPRCasFinder
CCCTCTCCCTGTGGGAGAGGGCCGGGTTGAGGGCGAGGTAAAAGCAAAACGGCAACCCCGTTGCCGTTTTTAGTGTTTGCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGC

>NZ_CP043382|1|1|1041860-1041974|CRISPRCasFinder
CCCTCTCCCTGTGGGAGAGGGCCGGGTTGAGGGC	GAGGTAAAAGCAAAACGGCAACCCCGTTGCCGTTTTTAGTGTTTGCT
CCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043382.1\|WP_032608820.1\|1031299_1032304_+\|Fe(3+)-siderophore-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182464
NZ_CP043382.1\|WP_032608809.1\|1046241_1046526_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225495
NZ_CP043382.1\|WP_032610190.1\|1046528_1046915_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368831
NZ_CP043382.1\|WP_022650555.1\|1049816_1051289_+\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NZ_CP043382.1\|WP_032608819.1\|1033289_1034090_+\|iron-enterobactin-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182336
NZ_CP043382.1\|WP_022650559.1\|1044309_1045116_-\|iron/manganese-ABC-transporter-ATP-binding-protein-SitB	unknown	unknown	gnl\|CDD\|185016
NZ_CP043382.1\|WP_032608811.1\|1045118_1046030_-\|iron/manganese-ABC-transporter-substrate-binding-protein-SitA	unknown	unknown	gnl\|CDD\|238557
NZ_CP043382.1\|WP_032608807.1\|1047053_1049087_-\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NZ_CP043382.1\|WP_032608824.1\|1027573_1028749_-\|isochorismate-synthase-EntC	unknown	unknown	gnl\|CDD\|184977
NZ_CP043382.1\|WP_032608813.1\|1042003_1042693_+\|enterobactin-synthase-subunit-EntD	unknown	unknown	gnl\|CDD\|182334
NZ_CP043382.1\|WP_032608822.1\|1028937_1029897_+\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236806
NZ_CP043382.1\|WP_022647369.1\|1043464_1044313_-\|iron/manganese-ABC-transporter-permease-subunit-SitC	unknown	unknown	gnl\|CDD\|334323
NZ_CP043382.1\|WP_032608821.1\|1029943_1031191_-\|enterobactin-transporter-EntS	unknown	unknown	gnl\|CDD\|236700
NZ_CP043382.1\|WP_072262679.1\|1032303_1033293_+\|iron-enterobactin-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182463
NZ_CP043382.1\|WP_032608818.1\|1034178_1038036_-\|enterobactin-non-ribosomal-peptide-synthetase-EntF	unknown	unknown	gnl\|CDD\|236668
NZ_CP043382.1\|WP_032608817.1\|1038255_1039455_-\|enterochelin-esterase	unknown	unknown	gnl\|CDD\|236695
NZ_CP043382.1\|WP_003858806.1\|1038032_1038245_-\|MbtH-family-NRPS-accessory-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP043382.1\|WP_032608815.1\|1039601_1041842_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|237410
NZ_CP043382.1\|WP_003858815.1\|1042628_1043468_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_CP043382.1\|WP_003858827.1\|1049215_1049803_+\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115

Protein	Function_ID	Function_description	E-value
NZ_CP043382.1\|WP_032608820.1\|1031299_1032304_+\|Fe(3+)-siderophore-ABC-transporter-permease	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	1.36742e-175
NZ_CP043382.1\|WP_032608809.1\|1046241_1046526_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	3.67146e-14
NZ_CP043382.1\|WP_032610190.1\|1046528_1046915_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368831	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system. RelE is a family of Gram-negative bacterial antitoxins of the RelE/RelB toxin-antitoxin system. Its cognate antitoxin is family RelB, pfam04221.	4.31615e-06
NZ_CP043382.1\|WP_022650555.1\|1049816_1051289_+\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NZ_CP043382.1\|WP_032608819.1\|1033289_1034090_+\|iron-enterobactin-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182336	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein.	0
NZ_CP043382.1\|WP_022650559.1\|1044309_1045116_-\|iron/manganese-ABC-transporter-ATP-binding-protein-SitB	gnl\|CDD\|185016	PRK15056, PRK15056, manganese/iron ABC transporter ATP-binding protein.	0
NZ_CP043382.1\|WP_032608811.1\|1045118_1046030_-\|iron/manganese-ABC-transporter-substrate-binding-protein-SitA	gnl\|CDD\|238557	cd01137, PsaA, Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	4.17063e-149
NZ_CP043382.1\|WP_032608807.1\|1047053_1049087_-\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP043382.1\|WP_032608824.1\|1027573_1028749_-\|isochorismate-synthase-EntC	gnl\|CDD\|184977	PRK15016, PRK15016, isochorismate synthase EntC; Provisional.	0
NZ_CP043382.1\|WP_032608813.1\|1042003_1042693_+\|enterobactin-synthase-subunit-EntD	gnl\|CDD\|182334	PRK10251, PRK10251, enterobactin synthase subunit EntD.	3.02128e-70
NZ_CP043382.1\|WP_032608822.1\|1028937_1029897_+\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236806	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional.	0
NZ_CP043382.1\|WP_022647369.1\|1043464_1044313_-\|iron/manganese-ABC-transporter-permease-subunit-SitC	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	6.83391e-81
NZ_CP043382.1\|WP_032608821.1\|1029943_1031191_-\|enterobactin-transporter-EntS	gnl\|CDD\|236700	PRK10489, PRK10489, enterobactin transporter EntS.	0
NZ_CP043382.1\|WP_072262679.1\|1032303_1033293_+\|iron-enterobactin-ABC-transporter-permease	gnl\|CDD\|182463	PRK10440, PRK10440, iron-enterobactin ABC transporter permease.	0
NZ_CP043382.1\|WP_032608818.1\|1034178_1038036_-\|enterobactin-non-ribosomal-peptide-synthetase-EntF	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0
NZ_CP043382.1\|WP_032608817.1\|1038255_1039455_-\|enterochelin-esterase	gnl\|CDD\|236695	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional.	0
NZ_CP043382.1\|WP_003858806.1\|1038032_1038245_-\|MbtH-family-NRPS-accessory-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	6.57585e-27
NZ_CP043382.1\|WP_032608815.1\|1039601_1041842_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|237410	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor.	0
NZ_CP043382.1\|WP_003858815.1\|1042628_1043468_-\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	2.24762e-72
NZ_CP043382.1\|WP_003858827.1\|1049215_1049803_+\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	3.33362e-117

>NZ_CP043382.1|WP_032608815.1|1039601_1041842_+|TonB-dependent-siderophore-receptor
MNKKIHSLALLVNLGIYGVALPAMADDNTASAQHEDTMVITAAEQNLQAPGVSTITADEIRKNPPARDVAEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSIRLGWRGERDTRGDTGWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKKFDDQWHGSWNTYLNAPEHKDEGSTKRTNFSLSGPLGGDFSFRMYGNLDKTQADAWDINQGHQSDRTGAYANTLPAGREGVENKDINGVVRWDFAPMQSLEFEAGYSRQNNLYAGDTQNTNNDNALVKKNYGKETNRIYRQNFAVTWNGGWDNGITTSNWAQYEHTRNSRLGEGLAGGLEGLFNSNKFTDTDLADVMLHSEINLPIDFIVNQNLTLGTEWNQQRMKDSTSFTQTQQGGPIPGMSEDRSPYTSAEIFSLFAENNMELTDSTMLTPALRFDHHTIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYLLYSKGQGCYASSDGVGCYMMGNDDLKAETSINKEIGLEWKRDGWLAGVTWFRNDYRNKIEAGYAPIGQTSTGKVTTDIYQWENVPKAVVEGLEGSLNVPVSDTINWTNNITYMLQSKNKETGDRLSIIPEYTLNSNLSWQVRQDVSLQSTFTWYGKQQPKKYNYKGQPVTGSEKDEVSPYSIVGLSATWDVTKNVSLTGGVDNVFDKRQWRAGNAQTTGNTTTGAYMYGAGAYTYNEPGRTWYMSVNTRF
>NZ_CP043382.1|WP_032608817.1|1038255_1039455_-|enterochelin-esterase
MTVLTTGSEAWWQAKNGPERERHQENYRVTFWWRDPAGTQKTSTVKRVWLYVTGVTDHHQNARPQSLERVPDTDVWQWQGEFSPEWRGSYCFIPSDNENDFADAVFEGEQPDRMALREGWRKLLPHAVSDPLNPQSWRGGRGHAVSALEMPEAPVQPGWNHPDTPYNKPVCIDWHSARLKNRRRVWIFTTGDESPERPLAVLLDGQFWAESMPVWPALASLTHEGKLPPAVYVLIDVIDTAHRSRELPCNPDFWLAVQEELLPQVKSMAPFSDRADHTVVAGQSFGGLSSLYAGLNWPQRFGCILSQSGSYWWPHRGAQQDGLLIEQLKAGEKTARGLRIVLEAGRNEPLILRANQAIFAELHTQQPVFWRQVDGGHDALCWRGGLTQGLMTLWQPLIQ
>NZ_CP043382.1|WP_003858806.1|1038032_1038245_-|MbtH-family-NRPS-accessory-protein
MEFSNPFDNPQGQFAILQNDQGQYSLWPQQCELPAGWRVVCEPQSQEACQQWLAEQWQTLEPFYFAGERA
>NZ_CP043382.1|WP_032608818.1|1034178_1038036_-|enterobactin-non-ribosomal-peptide-synthetase-EntF
MNRLPLVAAQPGIWMAEQLSSLPNAWSVAHYTELKGAIDAPLLAKAIAEGMMQADTLRMRFAEDNGEVWQWIDEAMLLPEPSIVRVDSHDAAVALMEADLNQNLRVDSGLPLAFHQLIQVGESHWYWYQRYHHLVVDGFSFPAITRQIAAIYAAWQKGEPAPASPFTPFAEVVEEYQRYRDSEAYQRDGAFWAEQRQQLPSPVSLSSAPLPGHAATTDILRLKMAMDGRAFSQLAQMAGQAQRTDLALALVVLWLGRLTGRLDYAAGFIFMRRMGSAALTATGPVLNVLPLAVNIRPHESLPELALRLANQLKKMRRHQRYDAEQIVRDSGRAAGDEALFGPVLNVKVFDYQLDIDGVEAITHTLATGPVNDLELALFPDEQGGLSIEILANGQRYDEATLKGHAVRLNAMLTQFAANPDLRCGDVETVSEQEYARLARINDTGLALPSTTLADLVAEQASKTPDAPALADAHTELNYRQMREQVVALANLLRARGVKPGDSVAVALPRSVFLTLALHGIVEAGAAWLPLDTGYPDDRLRMMLEDAKPSLLITTDEQLPRFSDLSVETFSYNTLLPTSGAEPLRLAKPEQTAYIIFTSGSTGRPKGVMVGHTAIVNRLKWMQDHYPLTAHDVVAQKTPCSFDVSVWEFWWPFIAGAKLVMAEPDAHRDPQAMQSFFAEYGVTTTHFVPSMLAAFVASLTPENAHCCRTLKQVFCSGEALPTALCREWEQLTHAPLHNLYGPTEAAVDVSWYPAYGPELAAVEGNSVPIGFPVWNTGLRILDAMMRPVPFGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRAMLALPDVAQAVAHACVFNQAAATGGDARQLVGYVVSESGLPLDRDALLASLKAQLPPHMVPVVLLQISALPLSANGKLDRKALPLPELTSRTSGRAPETQTEVAVAQAFSSLLGCAVNDIEADFFALGGHSLLAMRLAAQLSRAFSRKVTPGQIMVASTVSKLSALLDSQMSDEQAQRLGYETLLPLRESNGPTLFCFHPASGFAWQFSVLARYLSPRWSIVGIQSPRPNGPMQQCADLDGVIEHHLNTLRKQQPQGPYYLFGYSLGGTLAQGIAARLREQGEAVAFLGLLDTWPPETQNWAEKEANGLDPAVLAEIERERQAFIAAQQGQGSSELFNAIEGNYADAVRLLTTAHSARFDGKATLFVAERTRTQDPQAAWAPWVGELEVYSQDCAHVDIISPQAFEKIGPVLKEILG
>NZ_CP043382.1|WP_032608819.1|1033289_1034090_+|iron-enterobactin-ABC-transporter-ATP-binding-protein
MTDSTTRLRGENLTLGYGKKIIARDLSVAIPDGHFTAIIGPNGCGKSTLLRTLSRLMSPVEGSVFLDGEQIQRFASKEVARRIGLLAQNATTPGDITVQELVSRGRYPHQPLFTRWRKEDDEAVKRAMQATGITELAQQSVDTLSGGQRQRAWIAMVLAQETSIMLLDEPTTWLDISHQIDLLELLSELNRTQGYTLAAVLHDLNQACRYATHLIALRDGEIVAQGAPKEIVTPELIARIYGMRCMIIDDPVAGTPLVVPLGKRAV
>NZ_CP043382.1|WP_072262679.1|1032303_1033293_+|iron-enterobactin-ABC-transporter-permease
MAPSRRLLTSVALLVVASLLLAVWSLQSGAVTLDFAQVFHVLTGSAPRNITMVVTEWRLPRVAMAILVGAALGVSGAIFQSLMRNPLGSPDVMGLNTGAWSGVLVAMVLFGQHLTAITFTAMAGGILTSLLIWALAWRNGIDTFRLIIIGIGIRAMLMAFNTWLLLQASLETALSAGLWYAGSLNGLTWGKTWPAAPLIILMFIGALLLVRRMRLLEMGDDSACALGVSVERSRLMLMLVAVLLTAASTAIAGPISFIALVAPHIARRLSGTARWGLTQAALCGAVLLLAADLCAQRLFTPYQLPVGVVTVSLGGIYLIVLLVQESRKK
>NZ_CP043382.1|WP_032608820.1|1031299_1032304_+|Fe(3+)-siderophore-ABC-transporter-permease
MSFSSSAVRAIAVPVLLLLLILAIALSLLVGAKPLPASVIVDAISGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGILGVNSGASFAIVLGAALFGFTSPSEQLVMAFCGALAASLVVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLSNGIALLNPDVYDQLRFWQAGSLDIRTLETLKVVVIPASVAAAVALCLSRALNSLSLGSDTATALGNRVARTQLTGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADVLGRLLVPGELRVSVVSAFIGAPVLIFLVRRRRGGSA
>NZ_CP043382.1|WP_032608821.1|1029943_1031191_-|enterobactin-transporter-EntS
MNQKSWLLNLSLLKTHPAYRAVFIARFISILSLGLLGVAVPVQIQTMTHSSWLVGLSVTLTGGAMFIGLMVGGVLADRYERKKLILLARGTCGVGFVGLCLNAMLPEPSLVAIYVLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMVGGLLLATGNVAWNYGLAAAGTFITTLTLLRLPLLPPPPQPREHPLKSLMAAIRFLFSNPLIGGIALLGGLLTMASAVRVLYPALAGEWQMSASEIGVLYAAIPLGAACGALTSGNLAQSARPGLIMLVATLASFIAIGFFSLMPVWALGVMCLVIFGWLSAVSSLLQYTLIQTQTPEGMLGRINGLWTAQNVTGDAIGAAILGGMGAIMTPVASASSSGFVLAMVGAILLVTLVELRRFRQEVALNDGAA
>NZ_CP043382.1|WP_032608822.1|1028937_1029897_+|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein
MKIAAVCRNALLLTGLFVLGLTSAAADDWPRQVSDSRGVHTLESKPTRIVSTSVTLTGSLLAIGAPVIASGATTPNNRVADAQGFLRQWGDIAKQRKVARLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSAIAPTLIINYDDKSWQELLTQLGTITGQETQAAERIAAFDKQLAQVKQQMKLPPQPVNAIVYTAAAHTANLWTTDSAQGKLLHQLGFTLADLPAGLQTSTSQGKRHDIIQLGGENLATGLNGEGLFVFAGDEKDVNAIYANPLLAHLPSVKNKRVWALGTETFRLDYYSAMLVLDRLNALFK
>NZ_CP043382.1|WP_032608824.1|1027573_1028749_-|isochorismate-synthase-EntC
MDTSLAEEVQHTATTLQADSFFFMSPYRSFTTSGCFARFSEPAVGGDDPAGPFQQKLAQAFRNAKNSGIAHPVMVGAIPFDTRKPSSLFIPQRWQTFSRPARQQSARYASGAQTLNVQQRTEIPPQPVFEEMVARAASLTATPQVNKVVLSRLIDIATDKQIDSSALMERLIAQNPASFNFHVPLEDGGVLLGASPELLLRKEGAHFSSLPLAGSARRQPDDVLDREAGTKLLASEKDRHEHDLVTQAMKTILEPRSHHLSMPASPQLITTPTLWHLATPVEGDARENENALTLACLLHPTPALSGFPHQAAKELIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCARLHQNTVRLFAGAGIVPASSPVGEWRETGVKLSTMLNVFGLH
>NZ_CP043382.1|WP_032608813.1|1042003_1042693_+|enterobactin-synthase-subunit-EntD
MHTTHSTFSLAGHTLHRITFDPTTFTDADLLWLPHHAQLANAGRKRKADHLAGRIAAAHALPDHTVPAIGPSGEPLWPQGISGSITHSGTQAIAVVTQYPALIGIDCETILSENEAREIKDGIIDTQEEPVLSRMGYPFALALTLVFSAKESLFKALFPQVQAWMGFDCARVTKLDDKTLTLALTRQLAGFEEGTAFPLHWQQHGEQVITLLSHAPGDEPSRWSPQTSR
>NZ_CP043382.1|WP_003858815.1|1042628_1043468_-|metal-ABC-transporter-permease
MMTLLLEPFQFAFMNNALLISLLVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWMMGLPLALGAFVAGLFCAVATGYLKDNSRIKQDTVMGIVFSGMFGAGLILYIAVKPEVHLDHILFGDMLGINGMDILQSGLVAGMIALVIGLKWRDFLLFCFDYQQAQASGLRTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAVAVLITRRFHMALLVAVAVSALVSVSGVYASFYLDSAPAPTIVVLFAMVFIVTFVVTSVKARRQERVTAE
>NZ_CP043382.1|WP_022647369.1|1043464_1044313_-|iron/manganese-ABC-transporter-permease-subunit-SitC
MNALLEPFGYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIAPEDIVQLAIIGVVSIVILLFKWKDLMVTFFDENHARAIGLRPERLKILFFTLLAVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVAIGSITSFLGAWASYYLDGATGGIIVVAQTLLFLLAFVFAPKHGLLASRRRAREAHP
>NZ_CP043382.1|WP_022650559.1|1044309_1045116_-|iron/manganese-ABC-transporter-ATP-binding-protein-SitB
MQKGIVVTDVTVTYRNGHTALRDASFSVPGGSIAALVGVNGSGKSTLFKAVMGFVRAASGTISILGLPPHRALRQNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGFLRRPKECDKQIVTDALKRVDMLELRHRQIGELSGGQKKRVFLARAIAQQGEVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMVKGTVLASGPTDITFTAENLERAFSGVLRHVVLSGSEDRIITDDERPFVAHRQEAK
>NZ_CP043382.1|WP_032608811.1|1045118_1046030_-|iron/manganese-ABC-transporter-substrate-binding-protein-SitA
MHPRQGLKRLLLGALLMTATTTGALAAEKFQVITTFTVIADMAKNVAGDAAEVTSITKPGAEIHEYQPTPGDIKRAQKAQLILANGMNLELWFQRFYQHLNGVPEVIVTKGITPMGISEGPYNGKPNPHAWMSPDNALIYVDNIRDALVKYDPANAQTYQRNADAYKQKITATLEPLRKQVAEIPEDKRWMVTSEGAFSYQARDLGLKELYLWPINADQQGTPQQVRKVIDLVKKHHIPAVFSESTVSDKPARQVARETGAHYGGVLYVDSLSAENGPVPTYIDLLNVTTRTLVQGIRDGMKE
>NZ_CP043382.1|WP_032608809.1|1046241_1046526_-|helix-turn-helix-domain-containing-protein
MSIFNELKSSLEEAVQIHNGRKAASRVTRYEVADVRAIREQLNITQSEMAKALGTSVDTIKSWESKRRNPTGLAAKVLNVIRENPAFYKALAGQ
>NZ_CP043382.1|WP_032610190.1|1046528_1046915_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSHAIEFIETSLFTRQIKSIATDDELKDLQKELIAWPDKGDLIQQTGGLRKIRMAAGSKGKRGGIRVIYFLATEEVIYFIMAYPKCIKDSLTETEKAELKKLTSILKNTASSAVNLRCTMYPNQAGGG
>NZ_CP043382.1|WP_032608807.1|1047053_1049087_-|choline-BCCT-transporter-BetT
MTDLSQDREKDKINPVVFYTSAGLILLFSLTTIFFRDFSAEWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTMEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKKINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPTEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVMGTLIIPFTFTLLWLSIFGNSALHEIIHGNATFAQEAMAHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSKLKDINSDAPNWLRIFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRVSASRDTAPRPLGAQDRLSWKKRLSRLMNYPGTRYTKQMMETVCFPAMEEVAQELRLRGAYVELKNLPPEEGENLGHLDLLVHMGDEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGNSVMFPDV
>NZ_CP043382.1|WP_003858827.1|1049215_1049803_+|transcriptional-regulator-BetI
MPKVGMQPIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFKDKNGLLEATMRDITGQLRDAVLSRLRALPDGSAEQRLQAIVGGNFDETQVSGAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAEEAGYGLAALIDGLWLRAALSGKPLDKTLAQSLTSHFISQHLPTD
>NZ_CP043382.1|WP_022650555.1|1049816_1051289_+|betaine-aldehyde-dehydrogenase
MSRMAEQQLYINGGYTSATSGRTFETINPANGEVLATVQAAGREDVDRAVESAKRGQKIWAAMTAMERSRILRRAVDILRERNDELATLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKFKAAFEQKIVERVGRIRAGDLFDEATNFGPMVSFPHRDSVMRYIAKGKEEGARVLCGGDVLKGEGFDNGAWVAPTVFTDCTDEMTIVREEIFGPVMSILTYESIEEAIRRANDTDYGLAAGIVTTDLNRAHGAIHQLEAGICWINTWGESAAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMGKFQSIF

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Crispr_ID: NZ_CP043382_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043382_2

1145002-1145084

Orphan

Consensus_repeat	Method
TGGACACTGGCTGGACATCGGCTGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043382_2

>merge|NZ_CP043382|2|1145002-1145084|CRISPRCasFinder
TGGACACTGGCTGGACATCGGCTGGACACTCCACCTCCACAGGCATTGATATAACTGCGTTTGCGCTGGACACCGGCTGGACA

>NZ_CP043382|2|2|1145002-1145084|CRISPRCasFinder
TGGACACTGGCTGGACATCGGCTGGACA	CTCCACCTCCACAGGCATTGATATAAC
TGCGTTTGCGCTGGACACCGGCTGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043382.1\|WP_126530348.1\|1148318_1148660_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043382.1\|WP_126530352.1\|1143165_1144599_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP043382.1\|WP_126530354.1\|1142866_1143166_-\|protein-ren	unknown	unknown	unknown
NZ_CP043382.1\|WP_047748435.1\|1147699_1147912_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043382.1\|WP_047746573.1\|1145969_1146191_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP043382.1\|WP_000607101.1\|1149787_1149997_+\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236900
NZ_CP043382.1\|WP_126530350.1\|1147040_1147673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043382.1\|WP_042863132.1\|1139290_1139581_-\|DUF1364-domain-containing-protein	unknown	unknown	gnl\|CDD\|377777
NZ_CP043382.1\|WP_126530365.1\|1140681_1140951_-\|DUF551-domain-containing-protein	unknown	unknown	gnl\|CDD\|367946
NZ_CP043382.1\|WP_126530356.1\|1141613_1142000_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043382.1\|WP_126530362.1\|1139573_1139744_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182029
NZ_CP043382.1\|WP_047746660.1\|1146308_1147019_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP043382.1\|WP_045340902.1\|1141996_1142257_-\|DUF4752-family-protein	unknown	unknown	gnl\|CDD\|339554
NZ_CP043382.1\|WP_022651079.1\|1149387_1149636_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043382.1\|WP_126530358.1\|1140427_1140682_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043382.1\|WP_000449472.1\|1145707_1145929_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP043382.1\|WP_126530360.1\|1139743_1140199_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182057
NZ_CP043382.1\|WP_059453307.1\|1150068_1150353_+\|host-nuclease-inhibitor-GamL	unknown	unknown	unknown
NZ_CP043382.1\|WP_126530346.1\|1148816_1149224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043382.1\|WP_042863131.1\|1138931_1139294_-\|RusA-family-crossover-junction-endodeoxyribonuclease	unknown	unknown	gnl\|CDD\|182075

Protein	Function_ID	Function_description	E-value
NZ_CP043382.1\|WP_126530362.1\|1139573_1139744_-\|hypothetical-protein	gnl\|CDD\|182029	PRK09689, PRK09689, prophage protein NinE; Provisional.	4.20744e-23
NZ_CP043382.1\|WP_126530352.1\|1143165_1144599_-\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	0
NZ_CP043382.1\|WP_045340902.1\|1141996_1142257_-\|DUF4752-family-protein	gnl\|CDD\|339554	pfam15944, DUF4752, Domain of unknown function (DUF4752). This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 90 and 105 amino acids in length. There is a conserved GLA sequence motif.	8.86468e-43
NZ_CP043382.1\|WP_047746573.1\|1145969_1146191_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	4.29841e-09
NZ_CP043382.1\|WP_047746660.1\|1146308_1147019_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	5.83813e-31
NZ_CP043382.1\|WP_000607101.1\|1149787_1149997_+\|cell-division-protein-FtsZ	gnl\|CDD\|236900	PRK11354, kil, FtsZ inhibitor protein; Reviewed.	1.05757e-36
NZ_CP043382.1\|WP_000449472.1\|1145707_1145929_-\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	7.7088e-09
NZ_CP043382.1\|WP_042863131.1\|1138931_1139294_-\|RusA-family-crossover-junction-endodeoxyribonuclease	gnl\|CDD\|182075	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed.	1.36821e-65
NZ_CP043382.1\|WP_042863132.1\|1139290_1139581_-\|DUF1364-domain-containing-protein	gnl\|CDD\|377777	pfam07102, DUF1364, Protein of unknown function (DUF1364). This family consists of several bacterial and phage proteins of around 95 residues in length. The function of this family is unknown.	3.22594e-45
NZ_CP043382.1\|WP_126530365.1\|1140681_1140951_-\|DUF551-domain-containing-protein	gnl\|CDD\|367946	pfam04448, DUF551, Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	7.46592e-10
NZ_CP043382.1\|WP_126530360.1\|1139743_1140199_-\|hypothetical-protein	gnl\|CDD\|182057	PRK09741, PRK09741, hypothetical protein; Provisional.	2.43365e-80

>NZ_CP043382.1|WP_126530352.1|1143165_1144599_-|AAA-family-ATPase
MTADFMAVPQNLEAEQSVIGGLLLDDDNSERVQKVLAMLKPESFYSRPHQLIFAEMRQMFRDNKPVDGLTLFDALEGKGLAEQVGGFAYLAEIAKNTPSAANIVAYAASVREAAMERYGISRLTEATEMLYSRNGMSATQKYEAIQGIFTQLADHSKNGSRRGLRSFGEVMDDWVADLEKRFDPSGEQRGMSTGIPSLDRLLAPKGLVKGSLFVIGARPKMGKTTLYGQMAINCAVREKKPALMFSLEMPGDQILEKLVGQKSGINPSIFYMPATDDADDQYQGDYDGDFKKAIATAGRLSEIDMLYIDDTPGLSLAHIVSESRRIKREKGFVGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELGCVVVLLTQLNRELEKRVNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGSTGTVYCNQINGAIYDTDQQAAAAERRGREQQPKKKGGF
>NZ_CP043382.1|WP_126530354.1|1142866_1143166_-|protein-ren
MKGKQAILRYLETHRTFTAKDVATECGMTINCITKNAIDLEKSRKIIRVSKVWRTVTYRLATPEEQAGTARSCTNGIFQECRNSPAMKRVLMVWGRAPA
>NZ_CP043382.1|WP_045340902.1|1141996_1142257_-|DUF4752-family-protein
MSILNILNTGLALMGWLFIMFKTGQWFISIALKQWDKRRKLSRRQKAVNEFYDAFDLSSIEPGTTVRLATKGDLTIMMYRTEGAAQ
>NZ_CP043382.1|WP_126530356.1|1141613_1142000_-|hypothetical-protein
MSNIDKLKSAAAKAVDNFDPNMFVETRDVLALLDELEASEKLNAELMEKQRLIDICQGQGLEHRIAAEKRAEAAEKRIAELERKEQHSDRQSVIDALAGSGEEWSDIEEYMQKWDAERAAAAGKGATS
>NZ_CP043382.1|WP_126530365.1|1140681_1140951_-|DUF551-domain-containing-protein
MVEPVTTANKLLDGWVACSERMPEDDDFVYIWPRPDFGVELHVGQYCECHPKGDGWYAQVYEQNYGIEWCPITVTHWMPLPAAPKQELK
>NZ_CP043382.1|WP_126530358.1|1140427_1140682_-|hypothetical-protein
MGKLTFVIEFEDGKEPPVYAHMEALGGKVVAVAFRDTLNEGNPTQTITTHPQVLSEMRCFVCNGNHPIGVACPFRSPTVVSHNA
>NZ_CP043382.1|WP_126530360.1|1139743_1140199_-|hypothetical-protein
MTLPVDGIKLHRGNFVAIGQQIQPLLDAGQCFRLQVKPWREKRSLSQNSLLHMWLAEISEYLINSGRTDATPDWVKRNLKKTYLGCEEVTYTDFVTGEKTTSWEPRHTADLDTGEMHVFLVKVEMWCAQFGLALTIPNGCEYQQLRDKQEV
>NZ_CP043382.1|WP_126530362.1|1139573_1139744_-|hypothetical-protein
MSTPLSRVITNEIFRVPARRQRKPEFKPSDIPTMKGCTARLVDQKWLRLAARRAHG
>NZ_CP043382.1|WP_042863132.1|1139290_1139581_-|DUF1364-domain-containing-protein
MANLCKAARGRECQVRIPGVCNGKSETSVLAHIRLAGLCGTGIKPPDLIATIACSSCHDEIDRRTRLVDAEYAKECALEGMARTQVIWLKEGLVKA
>NZ_CP043382.1|WP_042863131.1|1138931_1139294_-|RusA-family-crossover-junction-endodeoxyribonuclease
MNEYRISLPWPPSNNRYYRHNRGRTHISAEGQAYRDSVGRIIKDSMLDIGLATPVKIRIECHMPDRRRRDLDNLQKAAFDALTKSGFWLDDQQVDYYSVKRMPIVKGGRLELTITELEAA
>NZ_CP043382.1|WP_000449472.1|1145707_1145929_-|hypothetical-protein
METLTTRNKAEARRIESWVQRQIADLGTARIAEVAGINKSTVSRWRENLVPNMSLLLAILISNRDGVKGDFEA
>NZ_CP043382.1|WP_047746573.1|1145969_1146191_-|helix-turn-helix-domain-containing-protein
MINKKSQSSTPLEKAINAVGGSQKVLAEKVGVTPQAINMLKKRGGTLPVKKMRKYEEVTGLPREVLYPGIFAA
>NZ_CP043382.1|WP_047746660.1|1146308_1147019_+|helix-turn-helix-transcriptional-regulator
MTTISERIKFLLTKEGLKQRDLADSLSTSPQTVHNWIKRDSLSREAAQQISEKFGYSLDWLLSGTGSPKKDRESSIPLESEWGVVDSWDKNTPISADEVEVPFLKDIEFACGDGRVQCEDHNGFKLRFSKATLRRVGANSDGSGVLCFPASGDSMEPVIPDGATVAVDTGNKRIIDGELYAINQGELKRIKQLYRKPGGKLLIRSINRDYDDEEAEESEVEIIGFVFWYSVLRYRR
>NZ_CP043382.1|WP_126530350.1|1147040_1147673_+|hypothetical-protein
MRAIKTILLVSLLLSGCATELDNKIRSVDQAPTMQNKRDYLLSYSEQKGYSATAARAKFLKYGSEDEALLSRLVESCKASDRRSCVQKFYEKAANDAEQQKRSKCFSDEVCKKNLVIEESTTELNDKYYQVVYYNHYQSGDADRLTRMVCSAISNNQKSGMPFDQAESVVRGISGVDPVSREMLVGVGNACWNLSYYGFKDPLSALRPLR
>NZ_CP043382.1|WP_047748435.1|1147699_1147912_-|hypothetical-protein
MELDEERVNMMAHAVGRAVMELSFADLPVTQEAIIDKLEQYRRETGNVIGKGVNRDAAEIVRSGSAAIKK
>NZ_CP043382.1|WP_126530348.1|1148318_1148660_+|hypothetical-protein
MAETKMAPLLLNVDASEVLTQTGELLKLLELPASSFEGIPEHVVDLFFDRVRGLIDNIVLSDFATTVSTTDAGEICLKVKIIGLVEYLTSAVRAHGPHGLHEYILSTVGEIKE
>NZ_CP043382.1|WP_126530346.1|1148816_1149224_+|hypothetical-protein
MPEISTGHPIAKAFLPHQRVTTEGKRMKIGECDNSYFGEDDTFNTQISPKALAALIRQYKHCCRLSKVTSQTAVYRLCPHKLAEAKQYQIRRDHLELFLRVLSDSTADYDVEEIDTYFGGATDDWSLILKERISD
>NZ_CP043382.1|WP_022651079.1|1149387_1149636_+|hypothetical-protein
MSNPITVGFSGLTKRIFAGRSKPSKLAPGVREFTGEKFDVTDEALFAVAHLLAVRDDILIFPTADGKEIHLRADIKEKREAS
>NZ_CP043382.1|WP_000607101.1|1149787_1149997_+|cell-division-protein-FtsZ
MINHYGTTPLIRQCVTPGMMALHEGRTYRVSAVIQERKWVYLHTDAEIIRLSDCVIDVLLDGHGNPIQH
>NZ_CP043382.1|WP_059453307.1|1150068_1150353_+|host-nuclease-inhibitor-GamL
MNAYLTYDRIEDRRRVEQQLDDEKEKWIDDRAQKIIDMMPKEPSGLFHFTIPIDSSPYEGLRSDKAGEAYNDFISAVAYAQAEYDWEHRTGCPF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043382_2	2.1\|1145030\|27\|NZ_CP043382\|CRISPRCasFinder	1145030-1145056	27	NZ_LR134256	Klebsiella aerogenes strain NCTC9644 plasmid 3, complete sequence	1565-1591	4	0.852

1. spacer 2.1|1145030|27|NZ_CP043382|CRISPRCasFinder matches to NZ_LR134256 (Klebsiella aerogenes strain NCTC9644 plasmid 3, complete sequence) position: , mismatch: 4, identity: 0.852

ctccacctccacaggcattgatataac	CRISPR spacer
ctccacctccgcaggcattggtactac	Protospacer
**********.*********.**. **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

421488 : 487218

Klebsiella_phage(23.53%)

tail,tRNA,integrase,head,holin,terminase,portal,capsid

attL 455434:455451|attR 486448:486465

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022650816.1\|421488_421989_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_044596273.1\|422398_423730_+	hypothetical protein	NA	NA	NA	NA
WP_023315858.1\|423745_425782_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA
WP_003857881.1\|425888_426335_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_022650813.1\|426318_427110_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_022650812.1\|427209_428397_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_032609014.1\|428428_429136_-	CTP synthase	NA	NA	NA	NA
WP_003857886.1\|429286_429631_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_022650810.1\|429631_429937_-	hypothetical protein	NA	NA	NA	NA
WP_023315857.1\|430017_430272_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_032609012.1\|430584_431613_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	2.2e-13	32.1
WP_015570793.1\|431658_431757_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_015570794.1\|431757_431832_+	protein YoaJ	NA	NA	NA	NA
WP_003857896.1\|431885_432134_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_099725438.1\|432162_432348_-	hypothetical protein	NA	NA	NA	NA
WP_071524166.1\|432506_432599_+	stress response membrane protein YncL	NA	NA	NA	NA
WP_032609011.1\|432723_434223_+	EAL domain-containing protein	NA	NA	NA	NA
WP_032609010.1\|434227_434473_-	YmjA family protein	NA	NA	NA	NA
WP_042863323.1\|434548_434740_-	hypothetical protein	Q77Z09	Phage_21	7.8e-21	90.7
WP_045351079.1\|434884_436183_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_042863324.1\|436248_438246_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	2.6e-21	26.2
WP_042863382.1\|438448_439006_-	recombinase family protein	A0A1S6L009	Salmonella_phage	1.0e-73	76.0
WP_042863383.1\|439136_439715_+\|tail	tail fiber domain-containing protein	A0A2I6PD03	Escherichia_phage	8.7e-47	54.5
WP_126527242.1\|439680_440421_-\|tail	phage tail protein	G8C7K5	Escherichia_phage	2.4e-89	68.6
WP_010429924.1\|441008_441242_-	hypothetical protein	E4WL42	Enterobacteria_phage	3.9e-30	76.6
WP_042863329.1\|441349_442021_-	hypothetical protein	A0A2P0WA07	Enterobacter_phage	9.3e-85	71.7
WP_042863330.1\|442021_442336_-	hypothetical protein	A0A2P0WA17	Enterobacter_phage	3.7e-36	71.6
WP_042863332.1\|442377_445920_-\|tail	phage tail protein	Q9MCU0	Escherichia_phage	0.0e+00	60.8
WP_042863333.1\|445984_446587_-\|tail	tail assembly protein	I6PCW4	Cronobacter_phage	6.9e-47	52.6
WP_042863334.1\|446567_447284_-	peptidase P60	A0A1W6JP31	Morganella_phage	2.4e-62	47.4
WP_042863335.1\|447286_448036_-\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	6.1e-85	58.0
WP_042863336.1\|448118_448475_-\|tail	phage tail protein	A0A1W6JP11	Morganella_phage	7.7e-22	42.2
WP_042863337.1\|448474_451447_-\|tail	phage tail protein	A0A2H4J107	uncultured_Caudovirales_phage	3.3e-25	25.4
WP_050861122.1\|451436_451646_-	hypothetical protein	Q6UAW9	Klebsiella_phage	2.4e-07	43.3
WP_010433126.1\|451675_452020_-	hypothetical protein	NA	NA	NA	NA
WP_042863340.1\|452078_452552_-	hypothetical protein	NA	NA	NA	NA
WP_080317436.1\|452569_452980_-	hypothetical protein	Q6UAX1	Klebsiella_phage	1.6e-39	66.4
WP_042863341.1\|452985_453366_-	hypothetical protein	Q6UAX2	Klebsiella_phage	1.0e-43	71.1
WP_042863343.1\|453346_453688_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	1.3e-37	66.4
WP_042863344.1\|453684_454008_-\|head,tail	phage gp6-like head-tail connector protein	Q7Y407	Yersinia_phage	2.0e-32	64.2
WP_052215451.1\|453988_454441_-	hypothetical protein	Q6UAX5	Klebsiella_phage	2.0e-14	65.0
WP_042863346.1\|454500_455796_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	4.9e-175	74.4
455434:455451	attL	NA	NA	NA	NA
WP_042863347.1\|455864_456782_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	7.9e-111	68.2
WP_042863348.1\|456815_458075_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	4.0e-190	77.0
WP_010433111.1\|458074_458254_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.3e-05	49.1
WP_042863349.1\|458247_459963_-\|terminase	terminase large subunit	Q6UAY0	Klebsiella_phage	2.4e-278	79.3
WP_080317438.1\|459997_460321_-\|terminase	P27 family phage terminase small subunit	Q6UAY1	Klebsiella_phage	2.9e-44	79.4
WP_042863352.1\|460564_460927_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	3.2e-55	79.2
WP_042863353.1\|461129_461369_+	hypothetical protein	NA	NA	NA	NA
WP_042863354.1\|461522_462056_-	hypothetical protein	K7PHH7	Enterobacteria_phage	2.4e-67	78.2
WP_042863355.1\|462052_462592_-	lysozyme	K7PM52	Enterobacteria_phage	5.0e-81	79.4
WP_032634292.1\|462588_462804_-\|holin	holin	H9C183	Pectobacterium_phage	5.0e-24	73.9
WP_042863356.1\|462874_463930_-	site-specific DNA-methyltransferase	K7PKK9	Enterobacteria_phage	5.2e-175	80.9
WP_042863357.1\|464077_464269_-	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	1.1e-14	69.8
WP_042863358.1\|464747_465287_-	hypothetical protein	K7PKJ4	Enterobacteria_phage	7.5e-69	65.5
WP_042863359.1\|465606_466212_-	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-81	72.1
WP_042863360.1\|466225_467245_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.5e-98	53.1
WP_042863361.1\|467244_467613_-	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	2.7e-38	60.4
WP_042863362.1\|467603_467804_-	hypothetical protein	H6WRY8	Salmonella_phage	1.1e-09	47.0
WP_042863363.1\|468060_468315_-	cloacin	NA	NA	NA	NA
WP_072034969.1\|468638_468905_-	hypothetical protein	H6WRY6	Salmonella_phage	9.8e-22	67.6
WP_042863364.1\|468911_469145_-	DinI-like family protein	A0A0M4REN2	Salmonella_phage	1.5e-26	76.6
WP_042863365.1\|469353_469896_+	GNAT family N-acetyltransferase	D0R097	Streptococcus_phage	2.8e-07	36.6
WP_072034970.1\|470035_470503_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_023315835.1\|470721_472509_-	DUF4209 domain-containing protein	Q2P9X5	Enterobacteria_phage	1.6e-14	23.6
WP_023315834.1\|473136_473826_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_023315833.1\|474094_474349_-	DUF977 family protein	H6WRX9	Salmonella_phage	3.5e-24	68.8
WP_023315832.1\|474352_474772_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_122983244.1\|474786_475332_-	replication protein	A0A0U2JGJ0	Escherichia_phage	4.2e-67	76.2
WP_042863368.1\|475243_476302_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	4.1e-34	43.4
WP_042863369.1\|476338_476893_-	hypothetical protein	M9NZI6	Enterobacteria_phage	2.4e-14	33.0
WP_040017166.1\|476895_477126_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	8.0e-20	60.5
WP_080317437.1\|477215_477653_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.6e-37	59.0
WP_042863370.1\|478050_478233_+	DUF1482 family protein	NA	NA	NA	NA
WP_114079833.1\|480173_480893_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	2.9e-60	58.0
WP_072034971.1\|480945_481191_+	excisionase	NA	NA	NA	NA
WP_042863371.1\|481171_482299_+\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	5.2e-120	58.9
WP_052215455.1\|482324_483377_-	hypothetical protein	NA	NA	NA	NA
WP_003857898.1\|483561_484812_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	7.9e-21	94.4
WP_022650805.1\|484929_485592_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_022650804.1\|485591_486065_+	NUDIX hydrolase	NA	NA	NA	NA
WP_032103856.1\|486105_487218_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
486448:486465	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1110169 : 1155736

Cronobacter_phage(31.48%)

tail,integrase,lysis,head,holin

attL 1127079:1127095|attR 1158629:1158645

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032608758.1\|1110169_1110556_-\|tail	phage tail fiber protein	A0A0F7LDZ0	Escherichia_phage	1.3e-17	56.6
WP_126294952.1\|1111089_1113306_-	hypothetical protein	F1C5A8	Cronobacter_phage	3.0e-39	61.4
WP_042863109.1\|1113363_1115841_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	0.0e+00	92.8
WP_052215427.1\|1115827_1116355_-	HNH endonuclease	Q2NPG0	Xanthomonas_virus	6.7e-22	39.1
WP_052215429.1\|1116429_1116819_-	C40 family peptidase	F1C5F2	Cronobacter_phage	3.8e-62	89.3
WP_015571561.1\|1116832_1117303_-	hypothetical protein	F1C5F1	Cronobacter_phage	1.0e-66	80.1
WP_032671074.1\|1117302_1117800_-	hypothetical protein	F1C5F0	Cronobacter_phage	1.9e-87	90.9
WP_042863110.1\|1117841_1118069_-	hypothetical protein	NA	NA	NA	NA
WP_126530363.1\|1118079_1121595_-	tape measure protein	R9TMK1	Aeromonas_phage	9.8e-234	57.5
WP_042863112.1\|1121653_1122337_-	hypothetical protein	F1C5E8	Cronobacter_phage	5.0e-78	60.2
WP_042863113.1\|1122396_1123143_-	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	2.4e-97	75.8
WP_042863114.1\|1123201_1123585_-	hypothetical protein	G0ZNE4	Cronobacter_phage	8.3e-38	56.7
WP_042863115.1\|1123624_1124167_-	HNH endonuclease	A5H1J6	Xanthomonas_virus	2.5e-32	43.9
WP_042863116.1\|1124269_1124638_-	hypothetical protein	F1C5E3	Cronobacter_phage	1.0e-37	63.1
WP_059453295.1\|1124640_1125000_-	hypothetical protein	G0ZNE2	Cronobacter_phage	2.3e-37	65.2
WP_059453296.1\|1125231_1125669_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_032665489.1\|1125773_1125944_-	hypothetical protein	I6R0P9	Salmonella_phage	2.2e-11	50.0
WP_006808952.1\|1125943_1126324_-	hypothetical protein	F1C5E2	Cronobacter_phage	7.0e-29	54.5
WP_045347693.1\|1126326_1126692_-	hypothetical protein	NA	NA	NA	NA
WP_047716508.1\|1126701_1127799_-	hypothetical protein	F1C5E1	Cronobacter_phage	5.9e-161	77.7
1127079:1127095	attL	NA	NA	NA	NA
WP_059453297.1\|1127809_1128244_-	hypothetical protein	F1C5E0	Cronobacter_phage	9.1e-49	71.5
WP_059453298.1\|1128247_1129444_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.4e-94	49.6
WP_072262684.1\|1129782_1130790_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	2.4e-113	67.8
WP_114079838.1\|1130716_1132192_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	1.7e-155	59.8
WP_059453301.1\|1132202_1133678_-	hypothetical protein	A0A1W6JNY3	Morganella_phage	2.3e-253	83.9
WP_045332067.1\|1133677_1134193_-	hypothetical protein	A0A0H5AUE2	Pseudomonas_phage	8.8e-51	62.2
WP_059453302.1\|1134196_1134403_-	hypothetical protein	NA	NA	NA	NA
WP_059453303.1\|1134523_1135078_-	hypothetical protein	NA	NA	NA	NA
WP_059453304.1\|1135127_1135661_-	Rha family transcriptional regulator	Q38450	Enterobacteria_phage	7.4e-93	98.3
WP_059453305.1\|1136050_1136521_-\|lysis	lysis protein	Q8HA85	Salmonella_phage	7.1e-39	56.8
WP_032608725.1\|1136517_1136958_-	lysozyme	A0A0M4R365	Salmonella_phage	4.4e-51	71.1
WP_001514184.1\|1136961_1137237_-\|holin	phage holin family protein	S4TNV9	Salmonella_phage	5.8e-09	41.0
WP_032608724.1\|1137233_1137635_-	membrane protein	NA	NA	NA	NA
WP_042863130.1\|1138132_1138822_-	antiterminator	I6PDF8	Cronobacter_phage	4.5e-58	51.9
WP_114079839.1\|1138818_1138935_-	hypothetical protein	NA	NA	NA	NA
WP_042863131.1\|1138931_1139294_-	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	1.1e-52	83.2
WP_042863132.1\|1139290_1139581_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	3.4e-44	89.6
WP_126530362.1\|1139573_1139744_-	hypothetical protein	K7P7K0	Enterobacteria_phage	7.2e-18	86.8
WP_126530360.1\|1139743_1140199_-	hypothetical protein	K7P7B8	Enterobacteria_phage	2.0e-59	72.7
WP_126530358.1\|1140427_1140682_-	hypothetical protein	A0A1B0V7L5	Salmonella_phage	5.9e-08	45.6
WP_126530365.1\|1140681_1140951_-	DUF551 domain-containing protein	G5DA83	Enterobacteria_phage	2.4e-07	37.9
WP_126530356.1\|1141613_1142000_-	hypothetical protein	NA	NA	NA	NA
WP_045340902.1\|1141996_1142257_-	DUF4752 family protein	T1S9K2	Salmonella_phage	3.1e-36	91.7
WP_126530354.1\|1142866_1143166_-	protein ren	M1FPD5	Enterobacteria_phage	4.1e-16	49.5
WP_126530352.1\|1143165_1144599_-	AAA family ATPase	Q716D2	Shigella_phage	5.9e-230	86.5
WP_045618179.1\|1144588_1145488_-	hypothetical protein	Q37929	Escherichia_phage	3.5e-79	53.8
WP_000449472.1\|1145707_1145929_-	hypothetical protein	NA	NA	NA	NA
WP_047746573.1\|1145969_1146191_-	helix-turn-helix domain-containing protein	M9NZA8	Enterobacteria_phage	7.4e-31	94.5
WP_047746660.1\|1146308_1147019_+	helix-turn-helix transcriptional regulator	M9NZE3	Enterobacteria_phage	1.5e-120	89.0
WP_126530350.1\|1147040_1147673_+	hypothetical protein	NA	NA	NA	NA
WP_047748435.1\|1147699_1147912_-	hypothetical protein	G8C7T7	Escherichia_phage	1.6e-19	78.1
WP_126530348.1\|1148318_1148660_+	hypothetical protein	G8C7T6	Escherichia_phage	6.9e-52	92.9
WP_126530346.1\|1148816_1149224_+	hypothetical protein	NA	NA	NA	NA
WP_022651079.1\|1149387_1149636_+	hypothetical protein	NA	NA	NA	NA
WP_000607101.1\|1149787_1149997_+	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	3.9e-34	97.1
WP_059453307.1\|1150068_1150353_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-47	95.7
WP_032676300.1\|1150364_1150868_+	hypothetical protein	A0A0F7L7F5	uncultured_marine_virus	2.1e-12	29.5
WP_042863144.1\|1150864_1151488_+	YqaJ-like viral recombinase	S0A2A9	Cellulophaga_phage	7.2e-47	49.5
WP_042863145.1\|1151484_1151913_+	hypothetical protein	M9NYX4	Enterobacteria_phage	2.4e-70	93.0
WP_045897922.1\|1152073_1152625_+	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	1.1e-56	59.4
WP_042863147.1\|1152621_1152840_+	hypothetical protein	NA	NA	NA	NA
WP_042863148.1\|1152836_1153178_+	DUF551 domain-containing protein	U5P092	Shigella_phage	3.2e-17	50.6
WP_032608692.1\|1153269_1153488_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	4.6e-17	63.9
WP_032608691.1\|1153487_1153799_+	DUF2591 family protein	E5AGF4	Erwinia_phage	1.0e-14	47.4
WP_126530344.1\|1153776_1154016_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	1.4e-27	73.1
WP_032608689.1\|1154024_1154255_+	hypothetical protein	G8C7S3	Escherichia_phage	5.7e-34	94.7
WP_071886183.1\|1154360_1154696_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025756108.1\|1154572_1155736_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	1.4e-229	99.5
1158629:1158645	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1684599 : 1709687

Escherichia_phage(42.86%)

transposase,integrase

attL 1689631:1689690|attR 1708920:1709739

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000608644.1\|1684599_1685862_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_000239590.1\|1686117_1686993_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001393253.1\|1687039_1687372_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
1689631:1689690	attL	NA	NA	NA	NA
WP_001067855.1\|1689693_1690398_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002063889.1\|1691591_1692134_-	AAA family ATPase	NA	NA	NA	NA
WP_000557452.1\|1692146_1693007_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
WP_001067855.1\|1693113_1693818_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001334766.1\|1694449_1695280_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_063840321.1\|1695410_1695965_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001067855.1\|1696108_1696813_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_078310596.1\|1697073_1697271_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	1.2e-11	57.4
WP_071886836.1\|1697338_1697554_-	hypothetical protein	NA	NA	NA	NA
WP_031942322.1\|1697634_1698303_-	tetracycline resistance transcriptional repressor TetR	NA	NA	NA	NA
WP_031942321.1\|1698381_1699581_+	tetracycline efflux MFS transporter Tet(A)	A0A2H4UVM2	Bodo_saltans_virus	8.2e-07	22.4
WP_013851371.1\|1700095_1700599_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_001067855.1\|1700635_1701340_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_071886840.1\|1701398_1701866_+	restriction endonuclease	NA	NA	NA	NA
WP_001749967.1\|1701870_1702077_+	hypothetical protein	NA	NA	NA	NA
WP_001288432.1\|1702458_1703892_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_004098817.1\|1703925_1705140_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_024139167.1\|1705146_1705359_-	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|1705400_1706165_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001144737.1\|1706307_1706574_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004201280.1\|1706794_1707268_-	trimethoprim-resistant dihydrofolate reductase DfrA14	A0A140HLG8	Bacillus_phage	5.3e-18	33.8
WP_000845048.1\|1707423_1708437_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_015344971.1\|1708405_1708690_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|1708982_1709687_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
1708920:1709739	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3025909 : 3096572

Salmonella_phage(51.22%)

tail,tRNA,integrase,lysis,head,holin,terminase,portal,capsid,plate

attL 3020891:3020921|attR 3102264:3102294

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3020891:3020921	attL	NA	NA	NA	NA
WP_032607942.1\|3025909_3027469_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	7.4e-08	31.5
WP_003862595.1\|3027465_3027960_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_032607938.1\|3028105_3028870_+	siderophore-interacting protein	NA	NA	NA	NA
WP_003862593.1\|3028870_3030040_-	DNA repair ATPase	NA	NA	NA	NA
WP_042863282.1\|3030417_3031431_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	1.1e-116	59.9
WP_114079840.1\|3031440_3032346_-	NAD-dependent DNA ligase	NA	NA	NA	NA
WP_032610574.1\|3032351_3032966_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.2e-38	41.4
WP_042863280.1\|3033067_3033304_+	hypothetical protein	NA	NA	NA	NA
WP_015386351.1\|3033338_3033848_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.0e-83	93.5
WP_015386352.1\|3033855_3034056_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	8.7e-31	90.9
WP_032610572.1\|3034019_3034361_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.5e-51	85.8
WP_001744223.1\|3034428_3034662_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	5.4e-24	80.5
WP_032634595.1\|3034661_3034889_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	3.9e-35	93.3
WP_042863278.1\|3034885_3035782_+	DNA adenine methylase	E5G6L8	Salmonella_phage	1.7e-102	65.7
WP_042863277.1\|3035774_3038078_+	replication endonuclease	A0A0M4RTM8	Salmonella_phage	3.5e-272	63.6
WP_042863276.1\|3038229_3038925_+	DNA adenine methylase	A0A0M4S5U3	Salmonella_phage	6.7e-94	74.6
WP_001154443.1\|3039084_3039273_+	hypothetical protein	A0A1S6L006	Salmonella_phage	6.1e-26	98.4
WP_042863275.1\|3039284_3039518_+	DinI family protein	A0A1S6L014	Salmonella_phage	2.2e-33	92.2
WP_042863274.1\|3039804_3040023_+	hypothetical protein	NA	NA	NA	NA
WP_032706394.1\|3040022_3040865_+	hypothetical protein	A0A0M4R2T6	Salmonella_phage	3.8e-59	47.7
WP_080317432.1\|3040874_3041111_+	hypothetical protein	NA	NA	NA	NA
WP_006777758.1\|3041247_3042297_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	4.2e-156	79.1
WP_023307000.1\|3042296_3044060_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	3.2e-312	87.5
WP_042863273.1\|3044209_3045037_+\|capsid	GPO family capsid scaffolding protein	F1BUR1	Erwinia_phage	3.5e-73	56.7
WP_017382376.1\|3045052_3046201_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	4.6e-132	68.2
WP_032665783.1\|3046204_3046858_+	hypothetical protein	E5G6M7	Salmonella_phage	3.0e-56	56.1
WP_014884903.1\|3046956_3047424_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.3e-48	58.7
WP_000868184.1\|3047423_3047627_+\|tail	tail protein X	E5G6M9	Salmonella_phage	3.8e-34	100.0
WP_014884902.1\|3047630_3047846_+	hypothetical protein	E5G6N0	Salmonella_phage	2.0e-20	66.2
WP_014884901.1\|3047826_3048342_+	lysozyme	E5G6N1	Salmonella_phage	1.8e-72	76.5
WP_023306996.1\|3048338_3048767_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	1.2e-56	84.3
WP_072208435.1\|3048696_3048900_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	1.8e-28	91.0
WP_014884898.1\|3048862_3049294_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	3.5e-69	89.5
WP_014884897.1\|3049286_3049733_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.4e-60	81.1
WP_014884896.1\|3049801_3050380_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	8.2e-106	96.9
WP_014884895.1\|3050376_3050736_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	2.3e-53	89.8
WP_042863272.1\|3050722_3051631_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	6.8e-147	92.1
WP_014884893.1\|3051623_3052229_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	8.1e-112	94.0
WP_042863271.1\|3052225_3053878_+\|tail	tail fiber protein	E5G6P0	Salmonella_phage	8.4e-119	72.8
WP_042863270.1\|3053877_3054276_+\|tail	phage tail fiber protein	K7PMC4	Enterobacterial_phage	1.5e-18	47.7
WP_042863268.1\|3054408_3055581_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	2.1e-209	92.6
WP_007848874.1\|3055590_3056106_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	7.6e-87	93.0
WP_014884889.1\|3056160_3056463_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	3.1e-40	90.0
WP_007848878.1\|3056477_3056597_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	3.3e-14	92.3
WP_042863267.1\|3056589_3060123_+\|tail	phage tail tape measure protein	A0A1S6L010	Salmonella_phage	0.0e+00	68.5
WP_032636598.1\|3060122_3060608_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	6.8e-69	89.4
WP_042863265.1\|3060604_3061705_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.4e-183	92.1
WP_042863286.1\|3061774_3061993_+	DNA-binding transcriptional regulator	Q53ZE7	Salmonella_virus	3.2e-26	73.6
WP_063142604.1\|3062239_3063283_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	4.7e-184	89.8
WP_063142605.1\|3063282_3063870_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	3.7e-61	59.8
WP_126530370.1\|3064004_3064268_+	hypothetical protein	A0A218M4I5	Erwinia_phage	2.6e-27	69.8
WP_063142603.1\|3064298_3064808_+	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	2.3e-75	84.0
WP_074139616.1\|3064815_3065016_+	DUF2724 domain-containing protein	A0A218M4I1	Erwinia_phage	9.6e-22	79.0
WP_063142602.1\|3064979_3065318_+	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	5.4e-41	75.9
WP_063142601.1\|3065383_3065611_+	DUF2732 family protein	A0A218M4I9	Erwinia_phage	9.9e-15	61.3
WP_126530372.1\|3065611_3065893_+	DUF5405 family protein	A0A218M4I8	Erwinia_phage	1.8e-29	69.9
WP_063142599.1\|3065870_3068264_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	85.6
WP_063142598.1\|3068431_3068872_+	DinI family protein	A0A218M4I0	Erwinia_phage	3.1e-52	72.3
WP_063142597.1\|3069009_3069267_+	hypothetical protein	A0A1V0E5L9	Salmonella_phage	2.9e-18	56.4
WP_049108645.1\|3069584_3070607_-\|portal	phage portal protein	Q6K1J0	Salmonella_virus	6.0e-168	83.6
WP_058658676.1\|3070608_3072378_-\|terminase	terminase ATPase subunit family protein	A0A218M4M1	Erwinia_phage	9.4e-302	85.7
WP_059453244.1\|3072543_3073398_+\|capsid	GPO family capsid scaffolding protein	Q01088	Escherichia_phage	3.4e-108	70.1
WP_039671454.1\|3073458_3074532_+\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	1.6e-158	79.3
WP_059453245.1\|3074535_3075297_+\|terminase	terminase endonuclease subunit	A0A218M4L0	Erwinia_phage	7.3e-78	66.8
WP_052320068.1\|3075396_3075897_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	3.6e-57	68.0
WP_059453246.1\|3075896_3076100_+\|tail	phage tail protein	Q858W3	Yersinia_virus	1.6e-24	82.1
WP_049108653.1\|3076104_3076401_+\|holin	holin	O80308	Escherichia_phage	2.3e-40	88.8
WP_049108654.1\|3076387_3076885_+	glycoside hydrolase family 104 protein	O80309	Escherichia_phage	2.4e-85	91.4
WP_058658663.1\|3076881_3077295_+\|lysis	LysB family phage lysis regulatory protein	A0A0F7LDJ6	Escherichia_phage	7.1e-43	68.6
WP_115877087.1\|3077176_3077440_+\|holin	holin	S4TNY4	Salmonella_phage	4.1e-28	69.8
WP_039671463.1\|3077402_3077870_+\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	2.2e-72	85.8
WP_039671464.1\|3077862_3078312_+	phage virion morphogenesis protein	O80313	Escherichia_phage	1.8e-47	66.0
WP_039671465.1\|3078380_3079022_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	8.9e-93	80.3
WP_039671467.1\|3079018_3079366_+\|plate	baseplate assembly protein	A0A0F7LDQ1	Escherichia_phage	3.8e-42	74.8
WP_039671468.1\|3079369_3080278_+\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	1.1e-133	81.1
WP_039671470.1\|3080270_3080801_+\|tail	phage tail protein I	Q37841	Escherichia_phage	2.6e-90	85.8
WP_126530374.1\|3080812_3082999_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	1.8e-89	80.0
WP_126530376.1\|3083011_3083416_+\|tail	tail fiber assembly protein	U5P083	Shigella_phage	8.8e-30	52.2
WP_126530378.1\|3083540_3084731_+\|tail	phage tail sheath protein	Q7Y4D1	Escherichia_virus	5.9e-207	89.9
WP_045359411.1\|3084744_3085263_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	7.7e-87	90.7
WP_045359412.1\|3085324_3085600_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.8e-34	82.4
WP_039671477.1\|3085632_3085752_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	6.7e-15	92.3
WP_126530379.1\|3085744_3088288_+\|tail	phage tail tape measure protein	F1BUT7	Erwinia_phage	1.1e-221	69.9
WP_048249321.1\|3088303_3088783_+\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	2.6e-73	84.3
WP_063142593.1\|3088782_3089925_+	phage late control D family protein	U5N3V4	Enterobacteria_phage	2.9e-155	78.0
WP_039671482.1\|3089991_3090210_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	2.5e-31	81.9
WP_039671483.1\|3090200_3090425_+	hypothetical protein	NA	NA	NA	NA
WP_032607936.1\|3090641_3091148_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_006812010.1\|3091248_3093093_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_003862574.1\|3093245_3094991_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.4e-76	39.0
WP_001144069.1\|3095106_3095322_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_032607934.1\|3095558_3096572_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.3e-109	58.9
3102264:3102294	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3493891 : 3557749

Enterobacteria_phage(20.83%)

tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022651724.1\|3493891_3496519_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.2
WP_000906486.1\|3496760_3496946_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
WP_015571665.1\|3498136_3498703_+	fructose-1-phosphate/6-phosphogluconate phosphatase	NA	NA	NA	NA
WP_017692791.1\|3498699_3499128_+	DedA family protein	NA	NA	NA	NA
WP_022649137.1\|3499211_3500756_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_003862180.1\|3500908_3501424_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_003862181.1\|3501477_3502242_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_032610003.1\|3502228_3503884_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_006811709.1\|3504050_3505598_-	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	NA	NA
WP_022651722.1\|3505614_3506787_-	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	NA	NA
WP_017694792.1\|3506917_3507448_-	multidrug efflux transporter EmrAB transcriptional repressor EmrR	NA	NA	NA	NA
WP_032610002.1\|3507762_3508947_-	MFS transporter	NA	NA	NA	NA
WP_017382774.1\|3509137_3510133_-	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA
WP_015571659.1\|3510142_3511207_-	glycine betaine/L-proline ABC transporter permease ProW	NA	NA	NA	NA
WP_022651720.1\|3511199_3512402_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.2e-27	38.3
WP_022649130.1\|3512735_3513695_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0M4S3B4	Mycobacterium_phage	5.7e-136	72.1
WP_126527251.1\|3513704_3515849_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	6.0e-202	48.8
WP_003862188.1\|3515821_3516232_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	3.0e-17	44.3
WP_032609998.1\|3516228_3516468_-	glutaredoxin-like protein NrdH	A0A0M7REK7	Lactobacillus_phage	9.8e-13	43.2
WP_017382769.1\|3516711_3517038_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_006811693.1\|3517196_3517541_+	YgaC family protein	NA	NA	NA	NA
WP_032609996.1\|3517573_3518023_-	L-alanine exporter AlaE	NA	NA	NA	NA
WP_022651717.1\|3518519_3518924_+	DNA-binding protein StpA	NA	NA	NA	NA
WP_003862199.1\|3518961_3519141_-	hypothetical protein	NA	NA	NA	NA
WP_032609995.1\|3519223_3519742_-	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_003862203.1\|3519921_3520080_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_015571650.1\|3520076_3521006_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_022651715.1\|3521326_3521932_+	ankyrin repeat domain-containing protein	Q6VZ28	Canarypox_virus	1.6e-06	25.2
WP_086623611.1\|3523579_3524998_+	DUF1116 domain-containing protein	NA	NA	NA	NA
WP_032665825.1\|3525009_3526590_+	hypothetical protein	NA	NA	NA	NA
WP_032609988.1\|3526586_3527543_+	carbamate kinase family protein	NA	NA	NA	NA
WP_023314699.1\|3527544_3528924_+	amidohydrolase family protein	NA	NA	NA	NA
WP_023323646.1\|3528942_3529863_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023323645.1\|3530078_3531410_+	MFS transporter	NA	NA	NA	NA
WP_003862216.1\|3531446_3532196_+	glucose 1-dehydrogenase	NA	NA	NA	NA
WP_032609986.1\|3532208_3533054_+	transketolase	NA	NA	NA	NA
WP_022651706.1\|3533053_3534052_+	transketolase family protein	NA	NA	NA	NA
WP_042863460.1\|3534126_3534858_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_022651704.1\|3534854_3535457_-	short chain dehydrogenase	NA	NA	NA	NA
WP_022651703.1\|3535554_3536442_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023314694.1\|3536462_3537644_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_032609984.1\|3537719_3538067_-	HigA family addiction module antidote protein	A0A222YWD7	Escherichia_phage	1.9e-33	64.2
WP_032609983.1\|3538077_3538377_-	hypothetical protein	A0A222YWE2	Escherichia_phage	1.0e-27	61.7
WP_087920848.1\|3538627_3539788_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_032609980.1\|3539807_3542000_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	1.6e-32	30.7
WP_114079831.1\|3542599_3545218_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	4.7e-273	60.2
WP_032610603.1\|3545220_3545559_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	9.2e-49	77.7
WP_032610602.1\|3545555_3546311_+\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	1.0e-135	92.4
WP_032610600.1\|3546312_3547023_+	peptidase P60	K7PJV6	Enterobacteria_phage	1.5e-141	96.2
WP_032610599.1\|3547051_3547399_+	hypothetical protein	NA	NA	NA	NA
WP_032610598.1\|3547425_3548016_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	3.8e-90	85.2
WP_032610597.1\|3548070_3551868_+\|tail	phage tail protein	K7PHL5	Enterobacterial_phage	0.0e+00	83.5
WP_032610596.1\|3551911_3552226_+	hypothetical protein	A0A2P0WA17	Enterobacter_phage	6.4e-36	71.6
WP_032610595.1\|3552226_3552898_+	hypothetical protein	A0A2P0WA07	Enterobacter_phage	1.1e-85	70.9
WP_032610594.1\|3553005_3553239_+	hypothetical protein	E4WL42	Enterobacteria_phage	2.5e-29	75.3
WP_077870385.1\|3553296_3554424_+\|tail	tail fiber domain-containing protein	A0A2I6PID3	Escherichia_phage	2.1e-52	37.3
WP_071886176.1\|3554677_3555031_-	hypothetical protein	NA	NA	NA	NA
WP_123906383.1\|3555791_3556217_+	hypothetical protein	K7P834	Enterobacteria_phage	2.4e-25	47.2
WP_013096351.1\|3556303_3556543_-	DinI family protein	K7PKM2	Enterobacterial_phage	2.2e-33	89.9
WP_003863115.1\|3557266_3557749_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	6.8e-29	46.8

DBSCAN-SWA_6

4056107 : 4064957

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032103484.1\|4056107_4057172_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	6.4e-104	54.4
WP_032609646.1\|4057187_4058054_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.8e-110	66.3
WP_032609645.1\|4058066_4058957_+	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	4.8e-28	31.3
WP_023295000.1\|4058967_4059516_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	9.1e-54	54.4
WP_023294999.1\|4059651_4061058_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	5.2e-37	28.3
WP_032609644.1\|4061311_4062478_+	UDP-glucose 6-dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	1.2e-111	53.5
WP_032609643.1\|4063952_4064957_-	NAD-dependent epimerase	A0A2K9L0I7	Tupanvirus	3.3e-33	29.0

DBSCAN-SWA_7

4165980 : 4186098

Pectobacterium_phage(33.33%)

integrase,terminase

attL 4165545:4165559|attR 4171084:4171098

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4165545:4165559	attL	NA	NA	NA	NA
WP_032609570.1\|4165980_4166997_-\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	2.8e-125	64.0
WP_032609568.1\|4166980_4167229_-	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	6.4e-07	39.5
WP_071886173.1\|4167164_4167389_-	hypothetical protein	H9C154	Pectobacterium_phage	1.7e-11	56.3
WP_032609566.1\|4167439_4167622_-	hypothetical protein	NA	NA	NA	NA
WP_032609565.1\|4167624_4168185_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	2.9e-47	56.3
WP_032610253.1\|4168181_4170374_-	hypothetical protein	H9C157	Pectobacterium_phage	6.5e-103	35.9
WP_071886172.1\|4170424_4170748_-	hypothetical protein	NA	NA	NA	NA
WP_077870381.1\|4171299_4171713_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.0e-37	61.9
4171084:4171098	attR	NA	NA	NA	NA
WP_071886171.1\|4171781_4171976_+	hypothetical protein	NA	NA	NA	NA
WP_032609563.1\|4173202_4173961_+	hypothetical protein	NA	NA	NA	NA
WP_032609562.1\|4173960_4174371_+	hypothetical protein	NA	NA	NA	NA
WP_032609561.1\|4174431_4174773_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	3.7e-21	51.8
WP_032609560.1\|4174769_4176380_+\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	8.4e-225	70.3
WP_048859468.1\|4176400_4178647_+	hypothetical protein	A0A0F6TJC8	Escherichia_coli_O157_typing_phage	3.8e-66	46.0
WP_032609559.1\|4178676_4180158_-	hypothetical protein	NA	NA	NA	NA
WP_032609558.1\|4180154_4181096_-	glycosyltransferase family 2 protein	U5P087	Shigella_phage	5.5e-160	91.7
WP_023295990.1\|4181092_4181455_-	GtrA family protein	B9UDL8	Salmonella_phage	3.5e-46	75.0
WP_023295991.1\|4181604_4181835_+	hypothetical protein	A5LH82	Enterobacteria_phage	2.9e-22	71.0
WP_032609557.1\|4181815_4182355_+	lysozyme	H6WRZ4	Salmonella_phage	2.2e-92	89.3
WP_032609556.1\|4182351_4182711_+	hypothetical protein	R9TPM9	Aeromonas_phage	2.4e-15	45.5
WP_099516328.1\|4183282_4183384_+	DNA invertase	NA	NA	NA	NA
WP_003859653.1\|4183462_4183786_+	hypothetical protein	NA	NA	NA	NA
WP_022651459.1\|4183815_4184742_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032609555.1\|4184747_4185218_-	hypothetical protein	NA	NA	NA	NA
WP_003859661.1\|4185381_4186098_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-12	28.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP043383

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4590 : 27473

uncultured_virus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001553819.1\|4590_7488_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
WP_000509966.1\|7582_8188_+	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_004683689.1\|8752_9763_+\|transposase	IS30-like element ISAba125 family transposase	W5R8L2	Staphylococcus_phage	4.1e-52	38.4
WP_004201164.1\|9863_10676_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004201167.1\|10679_11045_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201168.1\|11049_11688_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201169.1\|11698_12730_-	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA
WP_004201171.1\|12734_13064_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_004201172.1\|13257_13548_+	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_004201176.1\|13603_15244_+	chaperonin GroEL	A0A219YK78	uncultured_virus	8.2e-175	62.1
WP_015056392.1\|15432_16962_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_017480460.1\|16922_17117_-	hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|17427_18132_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001235713.1\|19615_20173_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000027057.1\|20355_21216_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_012372818.1\|21385_22141_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
WP_014342204.1\|22221_22770_-	Na+/H+ antiporter	NA	NA	NA	NA
WP_076611394.1\|22885_24088_+\|transposase	ISL3-like element ISAeme19 family transposase	A9YX10	Burkholderia_phage	1.0e-102	53.2
WP_099147893.1\|24102_24495_+	molecular chaperone GroEL	A0A2I7SAK5	Vibrio_phage	8.5e-22	58.1
WP_058655923.1\|24487_24883_+	hypothetical protein	NA	NA	NA	NA
WP_040219234.1\|25489_26440_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	5.0e-76	55.6
WP_040219232.1\|26586_26787_-	hypothetical protein	NA	NA	NA	NA
WP_022652286.1\|26840_27473_-	recombinase family protein	A0A1V0E035	Clostridioides_phage	2.5e-07	31.9

DBSCAN-SWA_2

37655 : 45969

Cronobacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058655915.1\|37655_38930_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.6e-155	64.0
WP_058655916.1\|38929_39352_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.2e-29	50.8
WP_058655917.1\|39531_40203_-	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	2.8e-81	60.4
WP_058655918.1\|40552_41236_+	DNA methylase	A0A2I7RE86	Vibrio_phage	8.7e-30	36.9
WP_047359680.1\|41232_41457_+	hypothetical protein	NA	NA	NA	NA
WP_058655919.1\|41505_41922_+	DUF1380 family protein	NA	NA	NA	NA
WP_058655920.1\|42332_42839_+	antirestriction protein	A0A1I9S7Y0	Rhodococcus_phage	8.2e-09	31.7
WP_058655921.1\|42968_43232_-	hypothetical protein	NA	NA	NA	NA
WP_098945567.1\|43538_43706_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_059446943.1\|43659_43890_+	DUF905 domain-containing protein	NA	NA	NA	NA
WP_058672090.1\|43959_45969_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	2.1e-23	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043382

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP043383

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection