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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP041210 Salmonella enterica subsp. enterica serovar Newport strain SAP18-8729 plasmid pCFSAN074384_2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP041208 Salmonella enterica subsp. enterica serovar Newport strain SAP18-8729 chromosome, complete genome 2 crisprs WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,cas14j,DEDDh,DinG,c2c9_V-U4 0 31 8 0
NZ_CP041209 Salmonella enterica subsp. enterica serovar Newport strain SAP18-8729 plasmid pCFSAN074384_1, complete sequence 0 crisprs DEDDh 0 0 0 0

Results visualization

1. NZ_CP041208
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041208_1 941281-942467 TypeI-E I-E
19 spacers
cas8e,cse2gr11,cas7,cas5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041208_2 959136-960750 TypeI-E I-E
26 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP041208_2 2.26|960693|32|NZ_CP041208|PILER-CR 960693-960724 32 NC_004313 Salmonella phage ST64B, complete genome 31961-31992 1 0.969
NZ_CP041208_2 2.26|960693|32|NZ_CP041208|PILER-CR 960693-960724 32 KU927493 Salmonella phage 118970_sal3, complete genome 69573-69604 1 0.969
NZ_CP041208_2 2.26|960693|32|NZ_CP041208|PILER-CR 960693-960724 32 AY055382 Salmonella typhimurium phage ST64B complete sequence 31961-31992 1 0.969
NZ_CP041208_2 2.49|960690|32|NZ_CP041208|CRISPRCasFinder,CRT 960690-960721 32 NC_004313 Salmonella phage ST64B, complete genome 31961-31992 1 0.969
NZ_CP041208_2 2.49|960690|32|NZ_CP041208|CRISPRCasFinder,CRT 960690-960721 32 KU927493 Salmonella phage 118970_sal3, complete genome 69573-69604 1 0.969
NZ_CP041208_2 2.49|960690|32|NZ_CP041208|CRISPRCasFinder,CRT 960690-960721 32 AY055382 Salmonella typhimurium phage ST64B complete sequence 31961-31992 1 0.969
NZ_CP041208_1 1.19|942407|32|NZ_CP041208|CRISPRCasFinder 942407-942438 32 NZ_CP024424 Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence 112052-112083 5 0.844
NZ_CP041208_1 1.19|942407|32|NZ_CP041208|CRISPRCasFinder 942407-942438 32 NZ_CP020440 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence 224971-225002 5 0.844
NZ_CP041208_1 1.19|942407|32|NZ_CP041208|CRISPRCasFinder 942407-942438 32 NZ_CP044082 Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence 90792-90823 5 0.844
NZ_CP041208_1 1.21|942408|31|NZ_CP041208|CRT 942408-942438 31 NZ_CP044082 Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence 90792-90822 5 0.839
NZ_CP041208_1 1.21|942408|31|NZ_CP041208|CRT 942408-942438 31 NZ_CP031080 Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence 271400-271430 5 0.839
NZ_CP041208_1 1.21|942408|31|NZ_CP041208|CRT 942408-942438 31 NZ_CP024424 Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence 112053-112083 5 0.839
NZ_CP041208_1 1.21|942408|31|NZ_CP041208|CRT 942408-942438 31 NZ_CP020440 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence 224972-225002 5 0.839
NZ_CP041208_2 2.10|959717|32|NZ_CP041208|PILER-CR 959717-959748 32 MK448237 Klebsiella phage ST974-OXA48phi18.2, complete genome 10331-10362 5 0.844
NZ_CP041208_2 2.33|959714|32|NZ_CP041208|CRISPRCasFinder,CRT 959714-959745 32 MK448237 Klebsiella phage ST974-OXA48phi18.2, complete genome 10331-10362 5 0.844
NZ_CP041208_1 1.13|942042|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942042-942073 32 MK448383 Streptococcus satellite phage Javan248, complete genome 4976-5007 6 0.812
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 AP014010 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS *** 33568-33598 6 0.806
NZ_CP041208_1 1.19|942407|32|NZ_CP041208|CRISPRCasFinder 942407-942438 32 NZ_CP031080 Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence 271400-271431 6 0.812
NZ_CP041208_1 1.21|942408|31|NZ_CP041208|CRT 942408-942438 31 NC_009621 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence 654403-654433 6 0.806
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MH319741 Marine virus AG-345-E15 Ga0172270_11 genomic sequence 30961-30992 6 0.812
NZ_CP041208_2 2.10|959717|32|NZ_CP041208|PILER-CR 959717-959748 32 MK448230 Klebsiella phage ST16-OXA48phi5.2, complete genome 5451-5482 6 0.812
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MH319741 Marine virus AG-345-E15 Ga0172270_11 genomic sequence 30961-30992 6 0.812
NZ_CP041208_2 2.33|959714|32|NZ_CP041208|CRISPRCasFinder,CRT 959714-959745 32 MK448230 Klebsiella phage ST16-OXA48phi5.2, complete genome 5451-5482 6 0.812
NZ_CP041208_1 1.2|941371|32|NZ_CP041208|CRISPRCasFinder,CRT 941371-941402 32 NZ_CP024891 Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence 51303-51334 7 0.781
NZ_CP041208_1 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942164-942195 32 NZ_CP016366 Phaeobacter porticola strain P97 plasmid pP97_b, complete sequence 126588-126619 7 0.781
NZ_CP041208_1 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942164-942195 32 NZ_CP010602 Phaeobacter inhibens strain P83 plasmid pP83_c, complete sequence 115384-115415 7 0.781
NZ_CP041208_1 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942164-942195 32 NZ_CP010769 Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence 133543-133574 7 0.781
NZ_CP041208_1 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942164-942195 32 NZ_CP010708 Phaeobacter inhibens strain P66 plasmid pP66_c, complete sequence 115381-115412 7 0.781
NZ_CP041208_1 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942164-942195 32 NZ_CP010737 Phaeobacter inhibens strain P72 plasmid pP72_b, complete sequence 183735-183766 7 0.781
NZ_CP041208_1 1.19|942407|32|NZ_CP041208|CRISPRCasFinder 942407-942438 32 NC_008826 Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence 343727-343758 7 0.781
NZ_CP041208_1 1.19|942407|32|NZ_CP041208|CRISPRCasFinder 942407-942438 32 NC_009621 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence 654402-654433 7 0.781
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 4747-4778 7 0.781
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 389262-389293 7 0.781
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 AP014010 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS *** 33568-33599 7 0.781
NZ_CP041208_1 1.21|942408|31|NZ_CP041208|CRT 942408-942438 31 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 2052295-2052325 7 0.774
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 294630-294661 7 0.781
NZ_CP041208_2 2.21|960388|32|NZ_CP041208|PILER-CR 960388-960419 32 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 304164-304195 7 0.781
NZ_CP041208_2 2.21|960388|32|NZ_CP041208|PILER-CR 960388-960419 32 NZ_LT984809 Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence 194506-194537 7 0.781
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 294630-294661 7 0.781
NZ_CP041208_2 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT 960385-960416 32 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 304164-304195 7 0.781
NZ_CP041208_2 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT 960385-960416 32 NZ_LT984809 Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence 194506-194537 7 0.781
NZ_CP041208_1 1.8|941737|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 941737-941768 32 CP047389 Agrobacterium sp. CGMCC 11546 plasmid pA 272606-272637 8 0.75
NZ_CP041208_1 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942164-942195 32 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 276525-276556 8 0.75
NZ_CP041208_1 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942164-942195 32 AY639599 Bacteriophage TP Ogr (ogr) and putative protease genes, complete cds 1396-1427 8 0.75
NZ_CP041208_1 1.16|942225|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942225-942256 32 NC_019364 Sulfitobacter guttiformis plasmid pSD118, complete sequence 10703-10734 8 0.75
NZ_CP041208_1 1.19|942407|32|NZ_CP041208|CRISPRCasFinder 942407-942438 32 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 2052295-2052326 8 0.75
NZ_CP041208_2 2.21|960388|32|NZ_CP041208|PILER-CR 960388-960419 32 NZ_CP049157 Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence 1756038-1756069 8 0.75
NZ_CP041208_2 2.21|960388|32|NZ_CP041208|PILER-CR 960388-960419 32 NZ_CP049317 Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence 1879010-1879041 8 0.75
NZ_CP041208_2 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT 960385-960416 32 NZ_CP049157 Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence 1756038-1756069 8 0.75
NZ_CP041208_2 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT 960385-960416 32 NZ_CP049317 Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence 1879010-1879041 8 0.75
NZ_CP041208_1 1.10|941859|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 941859-941890 32 MN693011 Marine virus AFVG_117M58, complete genome 34901-34932 9 0.719
NZ_CP041208_1 1.13|942042|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942042-942073 32 MK250029 Prevotella phage Lak-C1, complete genome 220147-220178 9 0.719
NZ_CP041208_1 1.13|942042|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942042-942073 32 MK250016 Prevotella phage Lak-A1, complete genome 256365-256396 9 0.719
NZ_CP041208_1 1.13|942042|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942042-942073 32 MK250019 Prevotella phage Lak-A2, complete genome 177499-177530 9 0.719
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 NZ_CP053971 Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence 72031-72061 9 0.71
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 NZ_CP013278 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence 3414-3444 9 0.71
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 NC_018509 Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence 232723-232753 9 0.71
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 NZ_CP039724 Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence 129890-129920 9 0.71
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 NZ_CP051859 Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence 109942-109972 9 0.71
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 NZ_CP009347 Bacillus thuringiensis HD1002 plasmid 3, complete sequence 148698-148728 9 0.71
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 NZ_CP045025 Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence 3414-3444 9 0.71
NZ_CP041208_2 2.1|959165|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT 959165-959196 32 NZ_CP047227 Moraxella osloensis strain YV1 plasmid p1, complete sequence 115808-115839 9 0.719
NZ_CP041208_2 2.2|959226|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT 959226-959257 32 NZ_CP032695 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence 616323-616354 9 0.719
NZ_CP041208_2 2.2|959226|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT 959226-959257 32 NC_024369 Vibrio phage X29, complete genome 16391-16422 9 0.719
NZ_CP041208_2 2.2|959226|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT 959226-959257 32 MK575466 Vibrio phage Rostov 7, complete genome 37606-37637 9 0.719
NZ_CP041208_2 2.2|959226|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT 959226-959257 32 KJ545483 Vibrio phage phi 2, complete genome 16391-16422 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693555 Marine virus AFVG_25M96, complete genome 8842-8873 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693550 Marine virus AFVG_25M93, complete genome 10730-10761 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693245 Marine virus AFVG_25M69, complete genome 11115-11146 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693208 Marine virus AFVG_25M383, complete genome 25882-25913 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693436 Marine virus AFVG_25M57, complete genome 28024-28055 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693515 Marine virus AFVG_25M70, complete genome 10467-10498 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693320 Marine virus AFVG_25M58, complete genome 28018-28049 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693286 Marine virus AFVG_25M92, complete genome 9636-9667 9 0.719
NZ_CP041208_2 2.6|959473|32|NZ_CP041208|PILER-CR 959473-959504 32 MN693549 Marine virus AFVG_25M89, complete genome 11533-11564 9 0.719
NZ_CP041208_2 2.12|959839|32|NZ_CP041208|PILER-CR 959839-959870 32 NZ_CP013139 Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence 213856-213887 9 0.719
NZ_CP041208_2 2.26|960693|32|NZ_CP041208|PILER-CR 960693-960724 32 NZ_CP015221 Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence 111308-111339 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693555 Marine virus AFVG_25M96, complete genome 8842-8873 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693550 Marine virus AFVG_25M93, complete genome 10730-10761 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693245 Marine virus AFVG_25M69, complete genome 11115-11146 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693208 Marine virus AFVG_25M383, complete genome 25882-25913 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693436 Marine virus AFVG_25M57, complete genome 28024-28055 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693515 Marine virus AFVG_25M70, complete genome 10467-10498 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693320 Marine virus AFVG_25M58, complete genome 28018-28049 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693286 Marine virus AFVG_25M92, complete genome 9636-9667 9 0.719
NZ_CP041208_2 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT 959470-959501 32 MN693549 Marine virus AFVG_25M89, complete genome 11533-11564 9 0.719
NZ_CP041208_2 2.35|959836|32|NZ_CP041208|CRISPRCasFinder,CRT 959836-959867 32 NZ_CP013139 Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence 213856-213887 9 0.719
NZ_CP041208_2 2.49|960690|32|NZ_CP041208|CRISPRCasFinder,CRT 960690-960721 32 NZ_CP015221 Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence 111308-111339 9 0.719
NZ_CP041208_1 1.6|941615|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 941615-941646 32 MG945729 UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome 1763-1794 10 0.688
NZ_CP041208_1 1.9|941798|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 941798-941829 32 MK449008 Streptococcus phage Javan84, complete genome 18935-18966 10 0.688
NZ_CP041208_1 1.9|941798|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 941798-941829 32 MK448832 Streptococcus phage Javan85, complete genome 18935-18966 10 0.688
NZ_CP041208_1 1.16|942225|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942225-942256 32 AP022645 Bacillus wiedmannii PL1 plasmid pBwiPL1-2 DNA, complete sequence 62931-62962 10 0.688
NZ_CP041208_1 1.17|942286|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942286-942317 32 NZ_CP024657 Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence 129540-129571 10 0.688
NZ_CP041208_1 1.17|942286|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942286-942317 32 NZ_CP015354 Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence 111984-112015 10 0.688
NZ_CP041208_1 1.17|942286|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942286-942317 32 NC_047948 Staphylococcus phage phiSA_BS2, complete genome 46996-47027 10 0.688
NZ_CP041208_1 1.17|942286|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR 942286-942317 32 MH078572 Staphylococcus phage phiSA_BS1, complete genome 1850-1881 10 0.688
NZ_CP041208_1 1.18|942347|31|NZ_CP041208|CRISPRCasFinder 942347-942377 31 NC_011246 Borrelia recurrentis A1 plasmid pl124, complete sequence 78356-78386 10 0.677
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NC_011246 Borrelia recurrentis A1 plasmid pl124, complete sequence 78355-78386 10 0.688
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NZ_CP053971 Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence 72031-72062 10 0.688
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NZ_CP013278 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence 3413-3444 10 0.688
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NC_018509 Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence 232722-232753 10 0.688
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NZ_CP039724 Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence 129890-129921 10 0.688
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NZ_CP051859 Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence 109941-109972 10 0.688
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NZ_CP009347 Bacillus thuringiensis HD1002 plasmid 3, complete sequence 148697-148728 10 0.688
NZ_CP041208_1 1.20|942347|32|NZ_CP041208|CRT,PILER-CR 942347-942378 32 NZ_CP045025 Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence 3413-3444 10 0.688
NZ_CP041208_2 2.5|959412|32|NZ_CP041208|PILER-CR 959412-959443 32 NZ_CP021653 Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence 1888410-1888441 10 0.688
NZ_CP041208_2 2.5|959412|32|NZ_CP041208|PILER-CR 959412-959443 32 NZ_CP012688 Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence 1888408-1888439 10 0.688
NZ_CP041208_2 2.11|959778|32|NZ_CP041208|PILER-CR 959778-959809 32 MK047641 Phage NV21, complete genome 23610-23641 10 0.688
NZ_CP041208_2 2.13|959900|32|NZ_CP041208|PILER-CR 959900-959931 32 NZ_CP015881 Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence 191710-191741 10 0.688
NZ_CP041208_2 2.13|959900|32|NZ_CP041208|PILER-CR 959900-959931 32 NZ_CP030263 Ensifer adhaerens strain Corn53 plasmid AA, complete sequence 237223-237254 10 0.688
NZ_CP041208_2 2.21|960388|32|NZ_CP041208|PILER-CR 960388-960419 32 NZ_CP021033 Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence 91874-91905 10 0.688
NZ_CP041208_2 2.28|959409|32|NZ_CP041208|CRISPRCasFinder,CRT 959409-959440 32 NZ_CP021653 Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence 1888410-1888441 10 0.688
NZ_CP041208_2 2.28|959409|32|NZ_CP041208|CRISPRCasFinder,CRT 959409-959440 32 NZ_CP012688 Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence 1888408-1888439 10 0.688
NZ_CP041208_2 2.34|959775|32|NZ_CP041208|CRISPRCasFinder,CRT 959775-959806 32 MK047641 Phage NV21, complete genome 23610-23641 10 0.688
NZ_CP041208_2 2.36|959897|32|NZ_CP041208|CRISPRCasFinder,CRT 959897-959928 32 NZ_CP015881 Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence 191710-191741 10 0.688
NZ_CP041208_2 2.36|959897|32|NZ_CP041208|CRISPRCasFinder,CRT 959897-959928 32 NZ_CP030263 Ensifer adhaerens strain Corn53 plasmid AA, complete sequence 237223-237254 10 0.688
NZ_CP041208_2 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT 960385-960416 32 NZ_CP021033 Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence 91874-91905 10 0.688

1. spacer 2.26|960693|32|NZ_CP041208|PILER-CR matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

2. spacer 2.26|960693|32|NZ_CP041208|PILER-CR matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

3. spacer 2.26|960693|32|NZ_CP041208|PILER-CR matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

4. spacer 2.49|960690|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

5. spacer 2.49|960690|32|NZ_CP041208|CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

6. spacer 2.49|960690|32|NZ_CP041208|CRISPRCasFinder,CRT matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

7. spacer 1.19|942407|32|NZ_CP041208|CRISPRCasFinder matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****. 

8. spacer 1.19|942407|32|NZ_CP041208|CRISPRCasFinder matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****. 

9. spacer 1.19|942407|32|NZ_CP041208|CRISPRCasFinder matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****. 

10. spacer 1.21|942408|31|NZ_CP041208|CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****. 

11. spacer 1.21|942408|31|NZ_CP041208|CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****. 

12. spacer 1.21|942408|31|NZ_CP041208|CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****. 

13. spacer 1.21|942408|31|NZ_CP041208|CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****. 

14. spacer 2.10|959717|32|NZ_CP041208|PILER-CR matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 5, identity: 0.844

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
ccaggcgatcgcatctgggtgcgggaggcctt	Protospacer
** ***********.***********..* **

15. spacer 2.33|959714|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 5, identity: 0.844

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
ccaggcgatcgcatctgggtgcgggaggcctt	Protospacer
** ***********.***********..* **

16. spacer 1.13|942042|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MK448383 (Streptococcus satellite phage Javan248, complete genome) position: , mismatch: 6, identity: 0.812

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
tgaaaatcttctttcatagaaacgtatgtatt	Protospacer
*.**************** ** **** * .**

17. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.806

agcacaatcattattagatgaactt--tcatca	CRISPR spacer
aacacaagaattattagatgaacttggtgat--	Protospacer
*.*****  ****************  * **  

18. spacer 1.19|942407|32|NZ_CP041208|CRISPRCasFinder matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****. 

19. spacer 1.21|942408|31|NZ_CP041208|CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 6, identity: 0.806

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
ggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
** **************** *** *.* **. 

20. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MH319741 (Marine virus AG-345-E15 Ga0172270_11 genomic sequence) position: , mismatch: 6, identity: 0.812

ggaataaaaatgaatttgagtcaact-ctataa	CRISPR spacer
ataataaaaaagtatttgagtcaactgatata-	Protospacer
. ******** * *************  **** 

21. spacer 2.10|959717|32|NZ_CP041208|PILER-CR matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 6, identity: 0.812

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
gtcggcgatcgcatctgggtgcgtgaaacatg	Protospacer
 ..***********.******** ******* 

22. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MH319741 (Marine virus AG-345-E15 Ga0172270_11 genomic sequence) position: , mismatch: 6, identity: 0.812

ggaataaaaatgaatttgagtcaact-ctataa	CRISPR spacer
ataataaaaaagtatttgagtcaactgatata-	Protospacer
. ******** * *************  **** 

23. spacer 2.33|959714|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 6, identity: 0.812

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
gtcggcgatcgcatctgggtgcgtgaaacatg	Protospacer
 ..***********.******** ******* 

24. spacer 1.2|941371|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP024891 (Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence) position: , mismatch: 7, identity: 0.781

cagtgcggcagcgcgcaatcgagacacgccat	CRISPR spacer
cggtgcgacagcgagcaatcgagacgggctct	Protospacer
*.*****.***** ***********. **. *

25. spacer 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016366 (Phaeobacter porticola strain P97 plasmid pP97_b, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccgaaagcagataaaa	Protospacer
  ******* ********* ****** * .**

26. spacer 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010602 (Phaeobacter inhibens strain P83 plasmid pP83_c, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccacaagcaggcagaa	Protospacer
  ******* ********.******* . ***

27. spacer 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010769 (Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccacaagcaggcagaa	Protospacer
  ******* ********.******* . ***

28. spacer 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010708 (Phaeobacter inhibens strain P66 plasmid pP66_c, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccacaagcaggcagaa	Protospacer
  ******* ********.******* . ***

29. spacer 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010737 (Phaeobacter inhibens strain P72 plasmid pP72_b, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccacaagcaggcagaa	Protospacer
  ******* ********.******* . ***

30. spacer 1.19|942407|32|NZ_CP041208|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  ** 

31. spacer 1.19|942407|32|NZ_CP041208|CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **. 

32. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

33. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

34. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

agcacaatcattattagatgaactt--tcatcaa	CRISPR spacer
aacacaagaattattagatgaacttggtgatg--	Protospacer
*.*****  ****************  * **   

35. spacer 1.21|942408|31|NZ_CP041208|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.774

ggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
ggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
** ******* ************ . ***  

36. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.781

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
tgtataaaaatgaatttgaggtaactccctac	Protospacer
 * ***************** .*****. ** 

37. spacer 2.21|960388|32|NZ_CP041208|PILER-CR matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gcgatgtatgccgcgacgattgaatccacgct	Protospacer
********************.**.  *. .**

38. spacer 2.21|960388|32|NZ_CP041208|PILER-CR matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
accattcatgccgcgacgaacaagagcgaaca	Protospacer
.* ** .************ *.********* 

39. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.781

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
tgtataaaaatgaatttgaggtaactccctac	Protospacer
 * ***************** .*****. ** 

40. spacer 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gcgatgtatgccgcgacgattgaatccacgct	Protospacer
********************.**.  *. .**

41. spacer 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
accattcatgccgcgacgaacaagagcgaaca	Protospacer
.* ** .************ *.********* 

42. spacer 1.8|941737|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 8, identity: 0.75

caataggacagccattcgagcgcccagagttt	CRISPR spacer
tcacaggacagctattcgagcgcccagtccgt	Protospacer
. *.********.**************  . *

43. spacer 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
ttgcaacagtttctttccgcatgcagctgctt	Protospacer
 ************** ***** ****.*    

44. spacer 1.15|942164|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to AY639599 (Bacteriophage TP Ogr (ogr) and putative protease genes, complete cds) position: , mismatch: 8, identity: 0.75

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
gttattcagtttctgaccgccagcagtttgtt	Protospacer
**    ******** ***** *********  

45. spacer 1.16|942225|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NC_019364 (Sulfitobacter guttiformis plasmid pSD118, complete sequence) position: , mismatch: 8, identity: 0.75

atcatcgggattcattttgttgt--ccgggtggc	CRISPR spacer
gtcatcgtgatgcattttgttgtcccctaatg--	Protospacer
.****** *** ***********  ** ..**  

46. spacer 1.19|942407|32|NZ_CP041208|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***  

47. spacer 2.21|960388|32|NZ_CP041208|PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.***** 

48. spacer 2.21|960388|32|NZ_CP041208|PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.***** 

49. spacer 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.***** 

50. spacer 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.***** 

51. spacer 1.10|941859|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MN693011 (Marine virus AFVG_117M58, complete genome) position: , mismatch: 9, identity: 0.719

aactaacgtctatagctaaatgtagagaaaac	CRISPR spacer
taaaaggttctatagctaaaagtggagaaaat	Protospacer
 *  *.  ************ **.*******.

52. spacer 1.13|942042|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

53. spacer 1.13|942042|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

54. spacer 1.13|942042|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

55. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *. 

56. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *. 

57. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *. 

58. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *. 

59. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *. 

60. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *. 

61. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *. 

62. spacer 2.1|959165|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047227 (Moraxella osloensis strain YV1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ctggaacggcagtatttaaaaggggttattga	CRISPR spacer
cgtaaacggcagtaattaaaagcggtttgcaa	Protospacer
*  .********** ******* ****  ..*

63. spacer 2.2|959226|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
ccattggtcggattgtttgcgtgcggggccgg	Protospacer
. . .* .****************** * ***

64. spacer 2.2|959226|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT matches to NC_024369 (Vibrio phage X29, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

65. spacer 2.2|959226|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT matches to MK575466 (Vibrio phage Rostov 7, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

66. spacer 2.2|959226|32|NZ_CP041208|PILER-CR,CRISPRCasFinder,CRT matches to KJ545483 (Vibrio phage phi 2, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

67. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693555 (Marine virus AFVG_25M96, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

68. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

69. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693245 (Marine virus AFVG_25M69, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

70. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693208 (Marine virus AFVG_25M383, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

71. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693436 (Marine virus AFVG_25M57, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

72. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693515 (Marine virus AFVG_25M70, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

73. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693320 (Marine virus AFVG_25M58, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

74. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

75. spacer 2.6|959473|32|NZ_CP041208|PILER-CR matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

76. spacer 2.12|959839|32|NZ_CP041208|PILER-CR matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

gactcggcctgttttttgattttgacaatcag	CRISPR spacer
ccgtcggcctgttctttcattttgacttacac	Protospacer
   **********.*** ********   ** 

77. spacer 2.26|960693|32|NZ_CP041208|PILER-CR matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taagttac---gccagtgcgggcgtgttgctcatc	CRISPR spacer
---actgcgcggcgagtgcgggcgcgttgctcatg	Protospacer
   ..*.*   ** **********.********* 

78. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693555 (Marine virus AFVG_25M96, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

79. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

80. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693245 (Marine virus AFVG_25M69, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

81. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693208 (Marine virus AFVG_25M383, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

82. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693436 (Marine virus AFVG_25M57, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

83. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693515 (Marine virus AFVG_25M70, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

84. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693320 (Marine virus AFVG_25M58, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

85. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

86. spacer 2.29|959470|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

87. spacer 2.35|959836|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

gactcggcctgttttttgattttgacaatcag	CRISPR spacer
ccgtcggcctgttctttcattttgacttacac	Protospacer
   **********.*** ********   ** 

88. spacer 2.49|960690|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taagttac---gccagtgcgggcgtgttgctcatc	CRISPR spacer
---actgcgcggcgagtgcgggcgcgttgctcatg	Protospacer
   ..*.*   ** **********.********* 

89. spacer 1.6|941615|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MG945729 (UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome) position: , mismatch: 10, identity: 0.688

aaaataacaacattatcagtgtgaaaagtctc	CRISPR spacer
gcaataacaaccttatcagtgtcaactttaat	Protospacer
. ********* ********** **   *  .

90. spacer 1.9|941798|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MK449008 (Streptococcus phage Javan84, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtatgcactgcttgataaagtcaggcca	CRISPR spacer
cacagtatggacagcttgataaagttacctgg	Protospacer
  ******* ** ************.*  . .

91. spacer 1.9|941798|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MK448832 (Streptococcus phage Javan85, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtatgcactgcttgataaagtcaggcca	CRISPR spacer
cacagtatggacagcttgataaagttacctgg	Protospacer
  ******* ** ************.*  . .

92. spacer 1.16|942225|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to AP022645 (Bacillus wiedmannii PL1 plasmid pBwiPL1-2 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

atcatcgggattcattttgttgtccgggtggc	CRISPR spacer
attatcaggattcattttgttgtattcatcaa	Protospacer
**.***.**************** .  .* . 

93. spacer 1.17|942286|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024657 (Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tgcatttctatgtcgaaaaataaaaacggcag	Protospacer
.*   .******** **********.***.  

94. spacer 1.17|942286|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015354 (Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tgcatttctatgtcgaaaaataaaaacggcag	Protospacer
.*   .******** **********.***.  

95. spacer 1.17|942286|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tagatacctatgtctaaaaatgaaaggggtat	Protospacer
..*   .**************.**** *** .

96. spacer 1.17|942286|32|NZ_CP041208|CRISPRCasFinder,CRT,PILER-CR matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tagatacctatgtctaaaaatgaaaggggtat	Protospacer
..*   .**************.**** *** .

97. spacer 1.18|942347|31|NZ_CP041208|CRISPRCasFinder matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.677

agcacaatcattattagatgaactttcatca	CRISPR spacer
tcttatggcattattagatgaattttcaaca	Protospacer
  .   . **************.***** **

98. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
tcttatggcattattagatgaattttcaacaa	Protospacer
  .   . **************.***** ***

99. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.  

100. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.  

101. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.  

102. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.  

103. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.  

104. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.  

105. spacer 1.20|942347|32|NZ_CP041208|CRT,PILER-CR matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.  

106. spacer 2.5|959412|32|NZ_CP041208|PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  . 

107. spacer 2.5|959412|32|NZ_CP041208|PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  . 

108. spacer 2.11|959778|32|NZ_CP041208|PILER-CR matches to MK047641 (Phage NV21, complete genome) position: , mismatch: 10, identity: 0.688

ccgaatatggtgataatgttgcaccttcgctc	CRISPR spacer
ctacttatggtgataatgtttcaccgtcttgg	Protospacer
*..  *************** **** ** .  

109. spacer 2.13|959900|32|NZ_CP041208|PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********  

110. spacer 2.13|959900|32|NZ_CP041208|PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********  

111. spacer 2.21|960388|32|NZ_CP041208|PILER-CR matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 10, identity: 0.688

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
tttgtccatgccgcgacgatcgataccgaaaa	Protospacer
 . .* .**************** * ****  

112. spacer 2.28|959409|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  . 

113. spacer 2.28|959409|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  . 

114. spacer 2.34|959775|32|NZ_CP041208|CRISPRCasFinder,CRT matches to MK047641 (Phage NV21, complete genome) position: , mismatch: 10, identity: 0.688

ccgaatatggtgataatgttgcaccttcgctc	CRISPR spacer
ctacttatggtgataatgtttcaccgtcttgg	Protospacer
*..  *************** **** ** .  

115. spacer 2.36|959897|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********  

116. spacer 2.36|959897|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********  

117. spacer 2.44|960385|32|NZ_CP041208|CRISPRCasFinder,CRT matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 10, identity: 0.688

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
tttgtccatgccgcgacgatcgataccgaaaa	Protospacer
 . .* .**************** * ****  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1193151 : 1269885 93 Salmonella_phage(37.93%) protease,terminase,head,holin,integrase,tail,capsid,transposase,tRNA,portal,lysis attL 1185232:1185248|attR 1275732:1275748
DBSCAN-SWA_2 1713793 : 1722964 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_3 1791055 : 1801562 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_4 1894694 : 1905344 12 Morganella_phage(25.0%) NA NA
DBSCAN-SWA_5 2803727 : 2931963 159 Salmonella_phage(51.89%) protease,terminase,head,holin,integrase,tail,tRNA,portal,lysis attL 2871320:2871339|attR 2943115:2943134
DBSCAN-SWA_6 2996393 : 3003707 7 Ralstonia_phage(16.67%) protease NA
DBSCAN-SWA_7 4355422 : 4400198 48 Burkholderia_phage(40.91%) plate,tail,tRNA NA
DBSCAN-SWA_8 4518967 : 4584748 79 Salmonella_phage(42.22%) protease,terminase,head,holin,plate,integrase,tail,capsid,portal,lysis attL 4548823:4548869|attR 4579802:4579848
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage