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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043559 Bacillus altitudinis strain CHB19 chromosome, complete genome 5 crisprs csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,WYL,DinG,cas3 0 12 12 0

Results visualization

1. NZ_CP043559
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043559_1 799439-799801 TypeIII I-C
5 spacers
PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043559_2 800145-800309 TypeIII I-C
2 spacers
PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043559_3 808022-808187 TypeIII I-C
2 spacers
cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,PD-DExK

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043559_4 808475-808837 TypeIII I-C
5 spacers
cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,PD-DExK

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043559_5 809129-809744 TypeIII I-C
9 spacers
cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,PD-DExK

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP043559_3 3.1|808054|35|NZ_CP043559|CRISPRCasFinder 808054-808088 35 NZ_CP011023 Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence 51542-51576 0 1.0
NZ_CP043559_3 3.2|808121|34|NZ_CP043559|CRISPRCasFinder 808121-808154 34 LR026976 Bacillus pumilus isolate 1 genome assembly, plasmid: p576 41362-41395 0 1.0
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 LR026976 Bacillus pumilus isolate 1 genome assembly, plasmid: p576 22502-22533 0 1.0
NZ_CP043559_5 5.3|809292|35|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809292-809326 35 NZ_CP011023 Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence 42600-42634 0 1.0
NZ_CP043559_2 2.2|800244|34|NZ_CP043559|CRISPRCasFinder 800244-800277 34 MF417903 Uncultured Caudovirales phage clone 10F_3, partial genome 15061-15094 2 0.941
NZ_CP043559_3 3.1|808054|35|NZ_CP043559|CRISPRCasFinder 808054-808088 35 NZ_CP011023 Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence 54468-54502 2 0.943
NZ_CP043559_3 3.1|808054|35|NZ_CP043559|CRISPRCasFinder 808054-808088 35 NZ_CP011023 Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence 66868-66902 2 0.943
NZ_CP043559_3 3.1|808054|35|NZ_CP043559|CRISPRCasFinder 808054-808088 35 NZ_CP011023 Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence 48861-48895 3 0.914
NZ_CP043559_3 3.1|808054|35|NZ_CP043559|CRISPRCasFinder 808054-808088 35 NZ_CP011023 Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence 56776-56810 4 0.886
NZ_CP043559_3 3.1|808054|35|NZ_CP043559|CRISPRCasFinder 808054-808088 35 NZ_CP011023 Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence 59729-59763 5 0.857
NZ_CP043559_3 3.1|808054|35|NZ_CP043559|CRISPRCasFinder 808054-808088 35 NZ_CP011023 Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence 64490-64524 5 0.857
NZ_CP043559_5 5.3|809292|35|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809292-809326 35 NC_017968 Staphylococcus phage TEM123, complete genome 43359-43393 6 0.829
NZ_CP043559_5 5.3|809292|35|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809292-809326 35 NC_048657 Staphylococcus phage IME1361_01, complete genome 11530-11564 6 0.829
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_013657 Lactococcus lactis subsp. lactis KF147 plasmid pKF147A, complete genome 15012-15043 7 0.781
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP009055 Lactococcus lactis subsp. lactis NCDO 2118 plasmid pNCDO2118, complete sequence 15032-15063 7 0.781
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 KX957968 Vibrio alginolyticus plasmid pVAS19, complete sequence 172928-172959 7 0.781
NZ_CP043559_4 4.2|808572|34|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 808572-808605 34 NZ_CP024244 Escherichia coli O128:H27 strain 90-9281 plasmid unnamed, complete sequence 89022-89055 7 0.794
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_019430 Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence 49591-49622 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_010901 Lactococcus lactis plasmid pNP40, complete sequence 64808-64839 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP043522 Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_10, complete sequence 509-540 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP043526 Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_02, complete sequence 55030-55061 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016715 Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063A, complete sequence 69376-69407 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_AP018727 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence 12822-12853 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_AP018727 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence 19954-19985 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_AP018728 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence 1811-1842 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_AP018728 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence 8931-8962 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_AP018730 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence 266-297 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_AP018730 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence 7398-7429 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 CP016714 Lactococcus lactis subsp. lactis strain UC77 plasmid pUC77B, complete sequence 7439-7470 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_025249 Lactococcus lactis subsp. cremoris MG1363 plasmid pFI430, complete sequence 38317-38348 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP031543 Lactococcus lactis subsp. cremoris strain 3107 plasmid p3107E, complete sequence 9942-9973 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016739 Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3C, complete sequence 8928-8959 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_LT599052 Lactococcus lactis subsp. lactis strain A12 plasmid pA12-3, complete sequence 33562-33593 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_017498 Lactococcus lactis plasmid pSK11A, complete sequence 4252-4283 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016694 Lactococcus lactis subsp. lactis strain 229 plasmid p229A, complete sequence 7439-7470 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016698 Lactococcus lactis subsp. lactis strain 229 plasmid p229E, complete sequence 22720-22751 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016707 Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109A, complete sequence 30550-30581 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_015862 Lactococcus lactis subsp. lactis plasmid pIL4, complete sequence 2460-2491 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 CP029293 Lactococcus lactis subsp. lactis KLDS 4.0325 plasmid unnamed6 96274-96305 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_008504 Lactococcus lactis subsp. cremoris SK11 plasmid 2, complete sequence 1354-1385 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016699 Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence 12740-12771 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016699 Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence 16273-16304 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016700 Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence 26660-26691 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016700 Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence 29916-29947 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016700 Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence 2514-2545 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016701 Lactococcus lactis subsp. lactis strain 275 plasmid p275C, complete sequence 52398-52429 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_015902 Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF50, complete sequence 23701-23732 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_009435 Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence 22508-22539 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_009435 Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence 23523-23554 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_019350 Lactococcus lactis subsp. cremoris plasmid pAF14, complete sequence 11892-11923 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_019377 Lactococcus lactis subsp. cremoris plasmid pLP712, complete sequence 28411-28442 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_MF150536 Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence 28191-28222 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016736 Lactococcus lactis subsp. lactis strain UC06 plasmid pUC06C, complete sequence 1320-1351 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 HC308455 Sequence 6 from Patent WO2010000269 67-98 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_017500 Lactococcus lactis plasmid pSK11P, complete sequence 49478-49509 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NZ_CP016737 Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3A, complete sequence 48916-48947 8 0.75
NZ_CP043559_1 1.3|799605|32|NZ_CP043559|PILER-CR 799605-799636 32 NC_008505 Lactococcus lactis subsp. cremoris SK11 plasmid 3, complete sequence 68055-68086 8 0.75
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_013657 Lactococcus lactis subsp. lactis KF147 plasmid pKF147A, complete genome 15012-15044 8 0.758
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP009055 Lactococcus lactis subsp. lactis NCDO 2118 plasmid pNCDO2118, complete sequence 15032-15064 8 0.758
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 NZ_CP039231 Piscirickettsia salmonis strain SR1 plasmid unnamed4, complete sequence 34570-34601 8 0.75
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 NZ_CP039237 Piscirickettsia salmonis strain BI1 plasmid unnamed3, complete sequence 36857-36888 8 0.75
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 NZ_CP039244 Piscirickettsia salmonis strain MR5 plasmid unnamed4, complete sequence 28488-28519 8 0.75
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_019430 Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence 49591-49623 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016739 Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3C, complete sequence 8928-8960 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_LT599052 Lactococcus lactis subsp. lactis strain A12 plasmid pA12-3, complete sequence 33562-33594 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016698 Lactococcus lactis subsp. lactis strain 229 plasmid p229E, complete sequence 22720-22752 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016707 Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109A, complete sequence 30550-30582 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_015862 Lactococcus lactis subsp. lactis plasmid pIL4, complete sequence 2460-2492 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 CP029293 Lactococcus lactis subsp. lactis KLDS 4.0325 plasmid unnamed6 96274-96306 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016699 Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence 12740-12772 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016699 Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence 16273-16305 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016700 Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence 26660-26692 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016700 Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence 29916-29948 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016700 Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence 2513-2545 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_009435 Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence 22508-22540 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_009435 Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence 23523-23555 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_MF150536 Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence 28191-28223 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016736 Lactococcus lactis subsp. lactis strain UC06 plasmid pUC06C, complete sequence 1320-1352 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_010901 Lactococcus lactis plasmid pNP40, complete sequence 64807-64839 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP043522 Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_10, complete sequence 508-540 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP043526 Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_02, complete sequence 55029-55061 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016715 Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063A, complete sequence 69375-69407 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_AP018727 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence 12821-12853 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_AP018727 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence 19953-19985 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_AP018728 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence 1810-1842 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_AP018728 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence 8930-8962 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_AP018730 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence 265-297 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_AP018730 Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence 7397-7429 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 CP016714 Lactococcus lactis subsp. lactis strain UC77 plasmid pUC77B, complete sequence 7438-7470 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_025249 Lactococcus lactis subsp. cremoris MG1363 plasmid pFI430, complete sequence 38316-38348 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP031543 Lactococcus lactis subsp. cremoris strain 3107 plasmid p3107E, complete sequence 9941-9973 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_017498 Lactococcus lactis plasmid pSK11A, complete sequence 4251-4283 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016694 Lactococcus lactis subsp. lactis strain 229 plasmid p229A, complete sequence 7438-7470 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_008504 Lactococcus lactis subsp. cremoris SK11 plasmid 2, complete sequence 1353-1385 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016701 Lactococcus lactis subsp. lactis strain 275 plasmid p275C, complete sequence 52397-52429 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_015902 Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF50, complete sequence 23700-23732 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_019350 Lactococcus lactis subsp. cremoris plasmid pAF14, complete sequence 11891-11923 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_019377 Lactococcus lactis subsp. cremoris plasmid pLP712, complete sequence 28410-28442 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 HC308455 Sequence 6 from Patent WO2010000269 66-98 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_017500 Lactococcus lactis plasmid pSK11P, complete sequence 49477-49509 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NZ_CP016737 Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3A, complete sequence 48915-48947 9 0.727
NZ_CP043559_1 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT 799604-799636 33 NC_008505 Lactococcus lactis subsp. cremoris SK11 plasmid 3, complete sequence 68054-68086 9 0.727
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 NZ_CP033938 Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-1, complete sequence 16699-16730 9 0.719
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 NZ_CP022275 Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence 36727-36758 9 0.719
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 NZ_CP022349 Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence 67486-67517 9 0.719
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 NZ_CP036439 Klebsiella pneumoniae strain ABFQB plasmid unnamed1, complete sequence 72965-72996 9 0.719
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 NZ_CP023186 Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence 124919-124950 9 0.719
NZ_CP043559_5 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809161-809192 32 MN661402 Klebsiella quasipneumoniae strain KP18-31 plasmid pKP18-31-IMP,KPC, complete sequence 99159-99190 9 0.719
NZ_CP043559_1 1.4|799670|34|NZ_CP043559|PILER-CR 799670-799703 34 NC_023141 Phaeobacter gallaeciensis DSM 26640 plasmid pGal_E78, complete sequence 21963-21996 10 0.706
NZ_CP043559_1 1.4|799670|34|NZ_CP043559|PILER-CR 799670-799703 34 NZ_CP010730 Phaeobacter inhibens strain P88 plasmid pP88_e, complete sequence 57486-57519 10 0.706
NZ_CP043559_1 1.4|799670|34|NZ_CP043559|PILER-CR 799670-799703 34 NZ_CP010640 Phaeobacter gallaeciensis strain P73 plasmid pP73_d, complete sequence 57486-57519 10 0.706
NZ_CP043559_1 1.8|799669|35|NZ_CP043559|CRISPRCasFinder,CRT 799669-799703 35 NC_023141 Phaeobacter gallaeciensis DSM 26640 plasmid pGal_E78, complete sequence 21963-21997 10 0.714
NZ_CP043559_1 1.8|799669|35|NZ_CP043559|CRISPRCasFinder,CRT 799669-799703 35 NZ_CP010730 Phaeobacter inhibens strain P88 plasmid pP88_e, complete sequence 57485-57519 10 0.714
NZ_CP043559_1 1.8|799669|35|NZ_CP043559|CRISPRCasFinder,CRT 799669-799703 35 NZ_CP010640 Phaeobacter gallaeciensis strain P73 plasmid pP73_d, complete sequence 57485-57519 10 0.714
NZ_CP043559_4 4.2|808572|34|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 808572-808605 34 MT843275 Serratia phage vB_SspM_BZS1, complete genome 19553-19586 10 0.706
NZ_CP043559_5 5.2|809225|35|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809225-809259 35 NZ_CP043499 Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence 1211146-1211180 10 0.714
NZ_CP043559_5 5.4|809359|34|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT 809359-809392 34 NZ_CP024444 Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence 95403-95436 11 0.676

1. spacer 3.1|808054|35|NZ_CP043559|CRISPRCasFinder matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 0, identity: 1.0

cgtaagcaggctttagcctgcacgcagtcggccgc	CRISPR spacer
cgtaagcaggctttagcctgcacgcagtcggccgc	Protospacer
***********************************

2. spacer 3.2|808121|34|NZ_CP043559|CRISPRCasFinder matches to LR026976 (Bacillus pumilus isolate 1 genome assembly, plasmid: p576) position: , mismatch: 0, identity: 1.0

aaaaaagatgtaccacggatgccatgaatatcgg	CRISPR spacer
aaaaaagatgtaccacggatgccatgaatatcgg	Protospacer
**********************************

3. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to LR026976 (Bacillus pumilus isolate 1 genome assembly, plasmid: p576) position: , mismatch: 0, identity: 1.0

tataagatcatgattgatcttatcaacatcaa	CRISPR spacer
tataagatcatgattgatcttatcaacatcaa	Protospacer
********************************

4. spacer 5.3|809292|35|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 0, identity: 1.0

ctactaaaacaactctattcagcatcttgttcacc	CRISPR spacer
ctactaaaacaactctattcagcatcttgttcacc	Protospacer
***********************************

5. spacer 2.2|800244|34|NZ_CP043559|CRISPRCasFinder matches to MF417903 (Uncultured Caudovirales phage clone 10F_3, partial genome) position: , mismatch: 2, identity: 0.941

cgctctccaatcgaccgtttttgcacctgcatag	CRISPR spacer
cgctctccaatcgaccgtgtttgctcctgcatag	Protospacer
****************** ***** *********

6. spacer 3.1|808054|35|NZ_CP043559|CRISPRCasFinder matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 2, identity: 0.943

cgtaagcaggctttagcctgcacgcagtcggccgc	CRISPR spacer
cgtaatcaggctctagcctgcacgcagtcggccgc	Protospacer
***** ******.**********************

7. spacer 3.1|808054|35|NZ_CP043559|CRISPRCasFinder matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 2, identity: 0.943

cgtaagcaggctttagcctgcacgcagtcggccgc	CRISPR spacer
cgtaagcaggctctagcctgcatgcagtcggccgc	Protospacer
************.*********.************

8. spacer 3.1|808054|35|NZ_CP043559|CRISPRCasFinder matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 3, identity: 0.914

cgtaagcaggctttagcctgcacgcagtcggccgc	CRISPR spacer
tttaagcaggcttcagcctgcacgcagtcggccgc	Protospacer
. ***********.*********************

9. spacer 3.1|808054|35|NZ_CP043559|CRISPRCasFinder matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 4, identity: 0.886

cgtaagcaggctttagcctgcacgcagtcggccgc	CRISPR spacer
gtcaagcaggctctagcctgcacgcagtcggccgc	Protospacer
  .*********.**********************

10. spacer 3.1|808054|35|NZ_CP043559|CRISPRCasFinder matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 5, identity: 0.857

cgtaagcaggctttagcctgcacgcagtcggccgc	CRISPR spacer
gtcaagcaggctctagcctgtacgcagtcggccgc	Protospacer
  .*********.*******.**************

11. spacer 3.1|808054|35|NZ_CP043559|CRISPRCasFinder matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 5, identity: 0.857

cgtaagcaggctttagcctgcacgcagtcggccgc	CRISPR spacer
gtcaagcaggcactagcctgcacgcagtcggccgc	Protospacer
  .******** .**********************

12. spacer 5.3|809292|35|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NC_017968 (Staphylococcus phage TEM123, complete genome) position: , mismatch: 6, identity: 0.829

ctactaaaacaactctattcagcatcttgttcacc-	CRISPR spacer
ctactaatacaactctatttagcat-ttataaacct	Protospacer
******* ***********.***** **.*  *** 

13. spacer 5.3|809292|35|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NC_048657 (Staphylococcus phage IME1361_01, complete genome) position: , mismatch: 6, identity: 0.829

ctactaaaacaactctattcagcatcttgttcacc-	CRISPR spacer
ctactaatacaactctatttagcat-ttataaacct	Protospacer
******* ***********.***** **.*  *** 

14. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_013657 (Lactococcus lactis subsp. lactis KF147 plasmid pKF147A, complete genome) position: , mismatch: 7, identity: 0.781

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacaaa	Protospacer
 .  .************* ************ 

15. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP009055 (Lactococcus lactis subsp. lactis NCDO 2118 plasmid pNCDO2118, complete sequence) position: , mismatch: 7, identity: 0.781

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacaaa	Protospacer
 .  .************* ************ 

16. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to KX957968 (Vibrio alginolyticus plasmid pVAS19, complete sequence) position: , mismatch: 7, identity: 0.781

tccagtcga-agccttttaaaattcaaaacaac	CRISPR spacer
-gcaataaatagccttttaaaatgcataacaac	Protospacer
  **.* .* ************* ** ******

17. spacer 4.2|808572|34|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024244 (Escherichia coli O128:H27 strain 90-9281 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

tataagatcaattagcataaacaa-aaaactaacc	CRISPR spacer
cttaagatcaatcagcataaacaacaatagcaac-	Protospacer
. **********.*********** ** * .*** 

18. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_019430 (Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

19. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_010901 (Lactococcus lactis plasmid pNP40, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

20. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP043522 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_10, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

21. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP043526 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_02, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

22. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016715 (Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063A, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

23. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_AP018727 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

24. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_AP018727 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

25. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_AP018728 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

26. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_AP018728 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

27. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_AP018730 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

28. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_AP018730 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

29. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to CP016714 (Lactococcus lactis subsp. lactis strain UC77 plasmid pUC77B, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

30. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_025249 (Lactococcus lactis subsp. cremoris MG1363 plasmid pFI430, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

31. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP031543 (Lactococcus lactis subsp. cremoris strain 3107 plasmid p3107E, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

32. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016739 (Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3C, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

33. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_LT599052 (Lactococcus lactis subsp. lactis strain A12 plasmid pA12-3, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

34. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_017498 (Lactococcus lactis plasmid pSK11A, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

35. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016694 (Lactococcus lactis subsp. lactis strain 229 plasmid p229A, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

36. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016698 (Lactococcus lactis subsp. lactis strain 229 plasmid p229E, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtgcatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

37. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016707 (Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109A, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

38. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_015862 (Lactococcus lactis subsp. lactis plasmid pIL4, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

39. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to CP029293 (Lactococcus lactis subsp. lactis KLDS 4.0325 plasmid unnamed6) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

40. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_008504 (Lactococcus lactis subsp. cremoris SK11 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

41. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

42. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

43. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

44. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

45. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtatattgaagccttttataattcaaaacgac	Protospacer
 .  .*.*********** **********.**

46. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016701 (Lactococcus lactis subsp. lactis strain 275 plasmid p275C, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

47. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_015902 (Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF50, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

48. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_009435 (Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

49. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_009435 (Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

50. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_019350 (Lactococcus lactis subsp. cremoris plasmid pAF14, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

51. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_019377 (Lactococcus lactis subsp. cremoris plasmid pLP712, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

52. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_MF150536 (Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

53. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016736 (Lactococcus lactis subsp. lactis strain UC06 plasmid pUC06C, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

54. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to HC308455 (Sequence 6 from Patent WO2010000269) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtacatcgaagccttttataattcaaaacgaa	Protospacer
 .  .************* **********.* 

55. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_017500 (Lactococcus lactis plasmid pSK11P, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtttattgaagccttttataattcaaaacgac	Protospacer
 .. .*.*********** **********.**

56. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NZ_CP016737 (Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3A, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtatattgaagccttttataattcaaaacgac	Protospacer
 .  .*.*********** **********.**

57. spacer 1.3|799605|32|NZ_CP043559|PILER-CR matches to NC_008505 (Lactococcus lactis subsp. cremoris SK11 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75

tccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
gtatattgaagccttttataattcaaaacgac	Protospacer
 .  .*.*********** **********.**

58. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_013657 (Lactococcus lactis subsp. lactis KF147 plasmid pKF147A, complete genome) position: , mismatch: 8, identity: 0.758

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacaaa	Protospacer
. .  .************* ************ 

59. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP009055 (Lactococcus lactis subsp. lactis NCDO 2118 plasmid pNCDO2118, complete sequence) position: , mismatch: 8, identity: 0.758

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacaaa	Protospacer
. .  .************* ************ 

60. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039231 (Piscirickettsia salmonis strain SR1 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

tataagatcatgattgatcttatcaacatcaa--	CRISPR spacer
tataaaatcatgattgattttat--gctttattc	Protospacer
*****.************.****  .* *.*   

61. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039237 (Piscirickettsia salmonis strain BI1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tataagatcatgattgatcttatcaacatcaa--	CRISPR spacer
tataaaatcatgattgattttat--gctttattc	Protospacer
*****.************.****  .* *.*   

62. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039244 (Piscirickettsia salmonis strain MR5 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

tataagatcatgattgatcttatcaacatcaa--	CRISPR spacer
tataaaatcatgattgattttat--gctttattc	Protospacer
*****.************.****  .* *.*   

63. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_019430 (Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

64. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016739 (Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3C, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

65. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_LT599052 (Lactococcus lactis subsp. lactis strain A12 plasmid pA12-3, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

66. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016698 (Lactococcus lactis subsp. lactis strain 229 plasmid p229E, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtgcatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

67. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016707 (Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109A, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

68. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_015862 (Lactococcus lactis subsp. lactis plasmid pIL4, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

69. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to CP029293 (Lactococcus lactis subsp. lactis KLDS 4.0325 plasmid unnamed6) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

70. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

71. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

72. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

73. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

74. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtatattgaagccttttataattcaaaacgac	Protospacer
. .  .*.*********** **********.**

75. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_009435 (Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

76. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_009435 (Lactococcus lactis NCDO 1867 plasmid pGdh442, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

77. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_MF150536 (Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

78. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016736 (Lactococcus lactis subsp. lactis strain UC06 plasmid pUC06C, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

79. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_010901 (Lactococcus lactis plasmid pNP40, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

80. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP043522 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_10, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

81. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP043526 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_02, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

82. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016715 (Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063A, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

83. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_AP018727 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

84. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_AP018727 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD1, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

85. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_AP018728 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

86. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_AP018728 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD2, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

87. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_AP018730 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

88. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_AP018730 (Streptococcus dysgalactiae strain Kdys0611 plasmid pFGCSD4, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

89. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to CP016714 (Lactococcus lactis subsp. lactis strain UC77 plasmid pUC77B, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

90. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_025249 (Lactococcus lactis subsp. cremoris MG1363 plasmid pFI430, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

91. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP031543 (Lactococcus lactis subsp. cremoris strain 3107 plasmid p3107E, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

92. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_017498 (Lactococcus lactis plasmid pSK11A, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

93. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016694 (Lactococcus lactis subsp. lactis strain 229 plasmid p229A, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

94. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_008504 (Lactococcus lactis subsp. cremoris SK11 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

95. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016701 (Lactococcus lactis subsp. lactis strain 275 plasmid p275C, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

96. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_015902 (Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF50, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

97. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_019350 (Lactococcus lactis subsp. cremoris plasmid pAF14, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

98. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_019377 (Lactococcus lactis subsp. cremoris plasmid pLP712, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

99. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to HC308455 (Sequence 6 from Patent WO2010000269) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtacatcgaagccttttataattcaaaacgaa	Protospacer
. .  .************* **********.* 

100. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_017500 (Lactococcus lactis plasmid pSK11P, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtttattgaagccttttataattcaaaacgac	Protospacer
. .. .*.*********** **********.**

101. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP016737 (Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3A, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtatattgaagccttttataattcaaaacgac	Protospacer
. .  .*.*********** **********.**

102. spacer 1.7|799604|33|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_008505 (Lactococcus lactis subsp. cremoris SK11 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.727

atccagtcgaagccttttaaaattcaaaacaac	CRISPR spacer
ggtatattgaagccttttataattcaaaacgac	Protospacer
. .  .*.*********** **********.**

103. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033938 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-1, complete sequence) position: , mismatch: 9, identity: 0.719

tataagatcatgattgatcttatcaacatcaa	CRISPR spacer
ttcaagatcttgattgatcttatcaatgaggt	Protospacer
* .****** ****************..  . 

104. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022275 (Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence) position: , mismatch: 9, identity: 0.719

---tataagatcatgattgatcttatcaacatcaa	CRISPR spacer
gcatgcag---catgattgctgttatcaacatcat	Protospacer
   *..*.   ******** * ************ 

105. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022349 (Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence) position: , mismatch: 9, identity: 0.719

---tataagatcatgattgatcttatcaacatcaa	CRISPR spacer
gcatgcag---catgattgctgttatcaacatcat	Protospacer
   *..*.   ******** * ************ 

106. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036439 (Klebsiella pneumoniae strain ABFQB plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

---tataagatcatgattgatcttatcaacatcaa	CRISPR spacer
gcatgcag---catgattgctgttatcaacatcat	Protospacer
   *..*.   ******** * ************ 

107. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023186 (Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence) position: , mismatch: 9, identity: 0.719

---tataagatcatgattgatcttatcaacatcaa	CRISPR spacer
gcatgcag---catgattgctgttatcaacatcat	Protospacer
   *..*.   ******** * ************ 

108. spacer 5.1|809161|32|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to MN661402 (Klebsiella quasipneumoniae strain KP18-31 plasmid pKP18-31-IMP,KPC, complete sequence) position: , mismatch: 9, identity: 0.719

---tataagatcatgattgatcttatcaacatcaa	CRISPR spacer
gcatgcag---catgattgctgttatcaacatcat	Protospacer
   *..*.   ******** * ************ 

109. spacer 1.4|799670|34|NZ_CP043559|PILER-CR matches to NC_023141 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_E78, complete sequence) position: , mismatch: 10, identity: 0.706

acgctgaggatgcaccagaaggaaagaaagacgc--------	CRISPR spacer
acgctcaggacgcaccagaaggaa--------gccttgcgtg	Protospacer
***** ****.*************        **        

110. spacer 1.4|799670|34|NZ_CP043559|PILER-CR matches to NZ_CP010730 (Phaeobacter inhibens strain P88 plasmid pP88_e, complete sequence) position: , mismatch: 10, identity: 0.706

acgctgaggatgcaccagaaggaaagaaagacgc--------	CRISPR spacer
acgctcaggacgcaccagaaggaa--------gccttgcgtg	Protospacer
***** ****.*************        **        

111. spacer 1.4|799670|34|NZ_CP043559|PILER-CR matches to NZ_CP010640 (Phaeobacter gallaeciensis strain P73 plasmid pP73_d, complete sequence) position: , mismatch: 10, identity: 0.706

acgctgaggatgcaccagaaggaaagaaagacgc--------	CRISPR spacer
acgctcaggacgcaccagaaggaa--------gccttgcgtg	Protospacer
***** ****.*************        **        

112. spacer 1.8|799669|35|NZ_CP043559|CRISPRCasFinder,CRT matches to NC_023141 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_E78, complete sequence) position: , mismatch: 10, identity: 0.714

aacgctgaggatgcaccagaaggaaagaaagacgc--------	CRISPR spacer
aacgctcaggacgcaccagaaggaa--------gccttgcgtg	Protospacer
****** ****.*************        **        

113. spacer 1.8|799669|35|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP010730 (Phaeobacter inhibens strain P88 plasmid pP88_e, complete sequence) position: , mismatch: 10, identity: 0.714

aacgctgaggatgcaccagaaggaaagaaagacgc--------	CRISPR spacer
aacgctcaggacgcaccagaaggaa--------gccttgcgtg	Protospacer
****** ****.*************        **        

114. spacer 1.8|799669|35|NZ_CP043559|CRISPRCasFinder,CRT matches to NZ_CP010640 (Phaeobacter gallaeciensis strain P73 plasmid pP73_d, complete sequence) position: , mismatch: 10, identity: 0.714

aacgctgaggatgcaccagaaggaaagaaagacgc--------	CRISPR spacer
aacgctcaggacgcaccagaaggaa--------gccttgcgtg	Protospacer
****** ****.*************        **        

115. spacer 4.2|808572|34|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 10, identity: 0.706

tataagatcaattagcataaacaaaaaactaacc	CRISPR spacer
tccaagttcaattagcataaacaataatacagat	Protospacer
* .*** ***************** **  .*. .

116. spacer 5.2|809225|35|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

tacactgccgcgcacgcaggaaaatgccgcagagt	CRISPR spacer
agttttgccgcgcacgcaggaaaatctcgccaaga	Protospacer
 .. .******************** .*** .** 

117. spacer 5.4|809359|34|NZ_CP043559|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024444 (Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence) position: , mismatch: 11, identity: 0.676

ctttatggctcattcattgctttttgctctttat	CRISPR spacer
gcggtcagttcattgattgttttttgctctttaa	Protospacer
 .   ..*.***** ****.************* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 513909 : 557267 61 uncultured_Caudovirales_phage(41.46%) portal,coat,tail,head,integrase,terminase,protease,tRNA attL 500880:500894|attR 534112:534126
DBSCAN-SWA_2 598729 : 608625 9 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 979999 : 1021428 60 uncultured_Caudovirales_phage(84.0%) holin,portal,plate,integrase,terminase,capsid attL 981664:981683|attR 1023385:1023404
DBSCAN-SWA_4 1687197 : 1693445 6 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_5 2047076 : 2054784 10 Ostreococcus_lucimarinus_virus(16.67%) NA NA
DBSCAN-SWA_6 2092639 : 2099082 10 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_7 2291727 : 2383474 115 Bacillus_phage(27.91%) holin,portal,plate,tail,terminase,capsid,tRNA,bacteriocin NA
DBSCAN-SWA_8 2813481 : 2838906 34 Clostridium_phage(27.27%) holin,portal,plate,tail,terminase,capsid NA
DBSCAN-SWA_9 3059729 : 3069605 11 Thermus_phage(33.33%) NA NA
DBSCAN-SWA_10 3134416 : 3143420 10 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_11 3406585 : 3455402 56 Escherichia_phage(25.0%) coat,protease,transposase NA
DBSCAN-SWA_12 3791083 : 3799797 8 uncultured_Mediterranean_phage(16.67%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage