CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP041714	Legionella geestiana strain HL-0438-4026 plasmid unnamed1, complete sequence	0 crisprs	NA	1
NZ_CP041715	Legionella geestiana strain HL-0438-4026 plasmid unnamed2, complete sequence	0 crisprs	NA	0
NZ_CP041713	Legionella geestiana strain HL-0438-4026 chromosome, complete genome	1 crisprs	cas3,RT,PrimPol,DinG,DEDDh,PD-DExK,WYL	4

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

14982 : 21757

Vibrio_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_135842008.1\|14982_15228_-	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	3.5e-13	65.5
WP_135842009.1\|15227_15410_-	carbon storage regulator	NA	NA	NA	NA
WP_135842010.1\|15578_16385_+	DNA/RNA non-specific endonuclease	X2KR27	Campylobacter_phage	7.9e-06	30.8
WP_135842011.1\|16406_16700_-	XRE family transcriptional regulator	A0A2D1GR59	Pseudomonas_phage	2.5e-10	44.1
WP_135842012.1\|16714_17026_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2I6TCA4	Escherichia_phage	1.2e-05	27.8
WP_135842013.1\|17089_17746_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_135842014.1\|17809_18901_-	replication protein	Q24LE6	Clostridium_phage	1.1e-21	44.0
WP_135842015.1\|18878_19115_-	TraY domain-containing protein	NA	NA	NA	NA
WP_135842016.1\|19326_19995_+	hypothetical protein	NA	NA	NA	NA
WP_135842017.1\|20019_20313_+	hypothetical protein	NA	NA	NA	NA
WP_135842018.1\|20312_21038_+	queuosine precursor transporter	NA	NA	NA	NA
WP_135842019.1\|21064_21757_+	7-cyano-7-deazaguanine synthase QueC	M1PKZ7	Cellulophaga_phage	2.0e-29	35.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP041713

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041713_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041713_1

801968-802056

Orphan

Consensus_repeat	Method
AATAGATCCCCGCCTGCGCGGGGAAGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041713_1

>merge|NZ_CP041713|1|801968-802056|CRISPRCasFinder
AATAGATCCCCGCCTGCGCGGGGAAGACGCGCAAGCGCTATTGCCGAAGGCCTTGTACAGAAATAGATCCCCGCCTGCGCGGGGAAGAC

>NZ_CP041713|1|1|801968-802056|CRISPRCasFinder
AATAGATCCCCGCCTGCGCGGGGAAGAC	GCGCAAGCGCTATTGCCGAAGGCCTTGTACAGA
AATAGATCCCCGCCTGCGCGGGGAAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041713.1\|WP_051551082.1\|803413_804601_+\|YihY-family-inner-membrane-protein	unknown	unknown	gnl\|CDD\|179313
NZ_CP041713.1\|WP_035904206.1\|797052_797640_-\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|184535
NZ_CP041713.1\|WP_115152884.1\|806192_806468_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041713.1\|WP_035904216.1\|791901_792453_+\|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase	unknown	unknown	gnl\|CDD\|236354
NZ_CP041713.1\|WP_081776838.1\|811038_811845_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP041713.1\|WP_028387497.1\|794839_796774_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP041713.1\|WP_028387495.1\|792418_793549_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP041713.1\|WP_135842358.1\|790975_791767_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_CP041713.1\|WP_115152790.1\|797964_799050_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP041713.1\|WP_028387502.1\|802127_803372_+\|MdfA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|185300
NZ_CP041713.1\|WP_028387511.1\|810689_811055_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP041713.1\|WP_028387507.1\|806809_807781_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041713.1\|WP_028387504.1\|804656_805310_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366387
NZ_CP041713.1\|WP_135842361.1\|799813_801151_+\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|366662
NZ_CP041713.1\|WP_028387501.1\|801178_801784_-\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP041713.1\|WP_028387508.1\|807824_809237_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041713.1\|WP_028387496.1\|793634_794762_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|236757
NZ_CP041713.1\|WP_081776837.1\|805258_806233_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP041713.1\|WP_115152885.1\|810221_810602_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|376440
NZ_CP041713.1\|WP_135842360.1\|798990_799653_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041713.1\|WP_051551082.1\|803413_804601_+\|YihY-family-inner-membrane-protein	gnl\|CDD\|179313	PRK01637, PRK01637, virulence factor BrkB family protein.	3.40131e-86
NZ_CP041713.1\|WP_035904206.1\|797052_797640_-\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|184535	PRK14144, PRK14144, heat shock protein GrpE; Provisional.	7.66144e-62
NZ_CP041713.1\|WP_035904216.1\|791901_792453_+\|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase	gnl\|CDD\|236354	PRK08942, PRK08942, D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase.	4.7268e-72
NZ_CP041713.1\|WP_028387497.1\|794839_796774_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP041713.1\|WP_028387495.1\|792418_793549_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP041713.1\|WP_135842358.1\|790975_791767_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.33729e-38
NZ_CP041713.1\|WP_115152790.1\|797964_799050_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.86287e-11
NZ_CP041713.1\|WP_028387502.1\|802127_803372_+\|MdfA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|185300	PRK15402, PRK15402, MdfA family multidrug efflux MFS transporter.	7.87031e-160
NZ_CP041713.1\|WP_081776838.1\|811038_811845_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	2.40401e-128
NZ_CP041713.1\|WP_028387504.1\|804656_805310_+\|hypothetical-protein	gnl\|CDD\|366387	pfam00957, Synaptobrevin, Synaptobrevin.	4.03229e-12
NZ_CP041713.1\|WP_135842361.1\|799813_801151_+\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP041713.1\|WP_028387501.1\|801178_801784_-\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	1.50777e-59
NZ_CP041713.1\|WP_028387511.1\|810689_811055_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.28748e-66
NZ_CP041713.1\|WP_028387496.1\|793634_794762_-\|molecular-chaperone-DnaJ	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0
NZ_CP041713.1\|WP_081776837.1\|805258_806233_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.68646e-14
NZ_CP041713.1\|WP_115152885.1\|810221_810602_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|376440	pfam01035, DNA_binding_1, 6-O-methylguanine DNA methyltransferase, DNA binding domain. This domain is a 3 helical bundle.	2.28834e-30

>NZ_CP041713.1|WP_028387501.1|801178_801784_-|NAD(P)H:quinone-oxidoreductase
MSNPYVLVLYYSRNGATADLARHIARGVGAVEGMEARIRTVPAVSTVCEASEPKVPDAGAPYVELDDLAHCAGLALGSPTRFGNMAAPLKYFLDGTSALWLSGALAGKPACVFSSTSSLHGGQEATLLSMMLPLFHHGMLLMGLPYTLPELSTTETGGTPYGVTHLAGIEGNRPLSNEEQVMARHMGERLARTAKALHHKE
>NZ_CP041713.1|WP_135842361.1|799813_801151_+|3-deoxy-7-phosphoheptulonate-synthase
MNQWSPASWQNYNCLQAATYPSPEALAEVVNQLSQLPPLVTSGEVKKLRNLVAMAGRGEAFLLQGGDCAESFQDCRSDIISNKLKILLQMSLVLLHGLHKPVVRIGRIAGQYAKPRSSDFETRDGVTLPSYRGDIVNAPEFTEAARTPNPALLLQGYSHAAMTLNFIRALLDGGFADLHHPQRWDLRFVEHSPQAEEYHAIVHAIANAMDFLEAIDGLRTSNLGKVDFYTSHEALHLPYEQALTRQLHDGNWYNLSTHLPWIGVRTAQPDSAHLEFLRGVENPVGVKVGPDTAPEALIEVINRLNPQRAEGRLLLITRFGTKRIAAHLPPLIEAVKKSAIPVTWSCDPMHGNTETTVDGIKTRHFDNILAELSEALAIHRRMESHLGGVHFELTGDNVTECIGGARGLEASDLKRAYQSLVDPRLNYEQSLEMAIQLSRQFHAGQ
>NZ_CP041713.1|WP_135842360.1|798990_799653_-|hypothetical-protein
MKTCKVVVLDLGVKGFHHILSWYLHNRANALPEPTHSVAIYQNRDIRQGLNLEFWLVPSHRRLECMREVLLQDASAVILVSGSVRASEVNLLLDRVCRSLPPGLSPWRACVEGVAPRGAARIRAVNLDNGAGIEQLMQEVVSNVPHESLQKRDIKERLRAWIRYAEGDGQTPDYTLGFSFLGRWQAVGRRRNCLTSVRDKNSYQRLGRCLDAQEGHHLTN
>NZ_CP041713.1|WP_115152790.1|797964_799050_+|IS4-family-transposase
MEINELSGILNGYFSWNKARMTCFACMLVSLFKVRTVNLSELACGFESEATIESRYKRIKRFFREFTICFTALAGWVMTFFDFDQTPLYLSIDRTNWQWGKQDINILMLSIAYKGIAIPLMWDLLPKRGNSNTTERIALLKRFIEQFGKERVACLLADREFVGNEWFSWLRSEGISFCIRIKSNTQTSNSLGLDVNVDALFYDLKPGEQRKLRGERRLWKQKVWLSALRLTDGELLIVATDKEVDSPIELYGRRWEIETLFSCLKSRGFNFEDTHITKPERISKLIALLSIGFCWAYKVGEWRNEQKAIKMKKHGRKEVSIFRYGLDFLRDAALNAKQNILSLIGQVMAFLSIEAPTEALI
>NZ_CP041713.1|WP_035904206.1|797052_797640_-|nucleotide-exchange-factor-GrpE
MHKESPKDWKAVREAAELEEAAAEAPEVEDAPHGALEHPDYAALEAKLTEAEQQAFEYREKCVRALAELENVRRRAQRDVEEAHRYALNKFVDSLLPVFDSIEQALDIASKEGNAAMQEGLELTQKLLQDTLSRFDITQLNPVGEAFNPQEHEAMTVQDVPGAAPNSVVAVFQKGYRIADRVVRPARVVVAPQKN
>NZ_CP041713.1|WP_028387497.1|794839_796774_-|molecular-chaperone-DnaK
MAKIIGIDLGTTNSCVAVLEGDTRKVIENSEGARTTPSIVAYTDDGEVLVGQAAKRQAVTNPKNTLFAIKRLIGRKFKDPIVQKDIKMVPYEIVSADNGDAWVRVKGDDKAPPQISAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKKRGDSVIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLALIEYLSAEFKKDTGIDLHNDPLALQRLKEAAEKAKIELSSAQQTDVNLPYITADASGPKHMNIKLTRAKLESLVEGLVQRSIAPCKTALKDAGKSVSEIDEVILVGGQTRMPLVQKTVQDLFGKEPRKDVNPDEAVAVGAAIQAGVLSGDVKDILLLDVTPLSLGIETLGGVMTKLIEKNTTIPTKANQVFSTADDNQTAVTVHVLQGEREQASANKSLGRFDLSDIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKAQSIVIKASSGLSDEEIDAMVKDAKAHADEDRKFREMADLRNQADGLIHSSEKSLKDLEAEMDADEKSAIENAIAALKEAVKGTDKAELEAKIKTLSDASGKMAERVYAKKAGSGSEAAGGEAAGAQTASSDDGVVDAEFEEVRDDEKK
>NZ_CP041713.1|WP_028387496.1|793634_794762_-|molecular-chaperone-DnaJ
MEKQDFYTLLGVGRDASEADIKKAYRKLAMKYHPDRNPDDKAAEEKFKEVQCAYDVLSDPEKRARYDRFGHAGIDPSMGGGHGGFGGFGDVFEDIFSNIFNAGRGGSQSHGQHGADLQYTISLTLEEAALGKQVEITVPRHGQCKTCEGSGAKKGSKPKTCETCDGMGQVRIQQGFFSIQQPCPSCRGQGQIITDPCTDCRGQGRVRESKKLTVKIPAGVDNGDRVRLSGEGEAGIHGGQTGDLYVQVSVKKHAIFERHDNELHCEVPISFATAALGGTIEVPTLEGRVSLKIPPETQTGKVFRLRGKGVKSVRGHGPGDLMCRVLVETPVNLTREQQDALAEWQASLDGSQKTHAPRLSTWFEGVKKFFEDMKF
>NZ_CP041713.1|WP_028387495.1|792418_793549_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MTHTPAILALADGTVFEGISVGAPGERVGELVFNTAMTGYQEILTDPSYAGQVVMLTGAHVGNTGCNLEDMESNRAFAAGLVMRECTFTPSNYRATQSLPEWLIAQGVPGISGIDTRALVLRLRNEGAMAVCLSTSGDKARAVALAQGFAGLSGSDLARAVTCETPRIWQGGRGEWASSSEPATLKVVAYDFGVKHTILRILSDLGCEITLVPAQTPAKEVLAMNPHGVFLSNGPGDPAACTYAIEATRTFLDAGVPVFGICLGFQILALACGAQTLKMKFGHHGANHPVAAIHGETARVLVTSQNHGFAVDAKTLPDCLEATHHSLFDGSLQGIRHRSKPAFGFQGHPESSPGPHDAEVLFGEFITHCRARAAHP
>NZ_CP041713.1|WP_035904216.1|791901_792453_+|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase
MEQKVILLDRDGIINHDSRAYIKSIDEFLFLPGSLRALARLKQAGFRIGIATNQSGIARGYYDAARLAAIHAHMLAAIRAEGGDIEAILHCPHLPDTGCTCRKPEPGMLQSLAKTMGFTLEGVPFAGDKITDIMAAEAAECSPIFITSAPHETAHFKAGHFAHVPAFSSLSDFTDALLLHDNA
>NZ_CP041713.1|WP_135842358.1|790975_791767_-|glycosyltransferase-family-2-protein
MVHDRHGGRVPVLQHLSIAAPAYNEAEGLAEVLLAWVEYLRNYSGLLSFEIVVCNDGSSDGTGELLDALAAENPEIRPIHLPHNEGAGAALAQAILHTQKDWVLLMDTDGQFPVENLERLAKTLQTARVQAVIGVRCKKDNALARFGSAASSRICNRLHGTRLRDFNSACKLVQGNLLRALRLEARGMNYSTEITARLIECGAPLAEVDIEHRAREYGRSHLRFMRDSVHRALFTAYLALRLLLINRNILRVSYEKTARVAKE
>NZ_CP041713.1|WP_028387502.1|802127_803372_+|MdfA-family-multidrug-efflux-MFS-transporter
MPEPLIYVSRQKALLFAGFLVLYEFLTYIANDMMMPGMLQVVEAFNAPESAVATSLTAYVLGGASLQIFLGPLSDRYGRRPVMLSGAVIFFVFTLLIAGSQTINQFLLARFFEGMGLCFIGVIGYATLQEIFDEMDAIRLVAIISNVALLAPLLGPLVGAALIHLMGWRAIFALIALLALIALVGLWRFMPEPVGAKTRAGGKIARIPLSPRTVFGNYKALLTDRSFMTGSLASGIISVPCIAWIGLSPLIIMRYGHASMMTYALWQLPVFGAIIVGNFVLHYLSRRFTIRTLILVGSATTIGGLVLGVALPVFISADYRWLMPGIILYSLGLGIANAPLYRHILFATPVSKGTAAALISLFSMTAQGLGVEAASLVYVGHDNRVFALFCALSGLVYAVCLLGVRMKTKGVPPA
>NZ_CP041713.1|WP_051551082.1|803413_804601_+|YihY-family-inner-membrane-protein
MSAFVRFVVRRFIEDDCAYRASALAFTTLLAIVPLMSVGVSILSSLPVFRQLATPLQDFIFENFVPASGKVVQGYLEQFASQVAELSVTGVCTLLVSALLVMYTIETSMNRIWRVSSPRKGPAAFLLYWAILSLSPLLLGLSLAASSWMISLPFIQHSTPTLLIGSLPLFLSFAGFSFLYIVVPNCPVHLRHGLIAGAIAAILFESAKHVFAGYLARYNSYELLYGAFAAIPVFFVWVYWVWVITLVGAEISYALSVHHLRRTGQPLDGFSHALLWLWMLWKAQCEGQTLSREALINGHRQPFEVDADGMLNALIELHLVEVTQDGQYVFNRDPSQITLYHLTQLLPWRLPNAGRLGASTSPWNALLREMDTTLHQALNVSLETLFVRERTHTKA
>NZ_CP041713.1|WP_028387504.1|804656_805310_+|hypothetical-protein
MQNKDEQPISIATSSSSMASSSSTPARPPLICTGIARRFAVNPTESWIEHAGYGLFASPLGRAWVEQLEKKALELIDNYPYVISMNNYLVHFYRVGANWCAAALNRELSDGELRSLVHFLLYEKIPLATVAHTPKNYVTRIKATRDALDDTTEIMRDNLEKFLERREALERLLEDTEELKIETNRFYLSTTELNSCWPDKPWWLPSLSTISSMCQIL
>NZ_CP041713.1|WP_081776837.1|805258_806233_+|DMT-family-transporter
MVAAIAVNDFQHVSDFIRVLSMGNITPRQKGILYATLSGVFFGLLGFYGVRVMQTGMSVFTMLFWRYLVASMCMMLVCMLSRDTSRAPPMELAKVFLWGVLFYSGSSIFYFLASQTLGTGLSMALLYTYPAMVMLAGLLFQGRIPGLYSLLALLVMMPGLWALTLGGSFHITALGMVWGLLSALTYSLYVLISKDSPVNPMLSTLMVSLGCLVTCLGGALVEGSFSMPQTAACWEYILILAIVCTSLPIVLLLKGLELLSPLEVSILSVLEPVFILFFGITLLHETLSLAQALGALLLIGGSLLSLREPMDVNAERTDCQYTPR
>NZ_CP041713.1|WP_115152884.1|806192_806468_-|hypothetical-protein
MMKLRLMLYGIGLSLAMSAFADCDLKRFRWECALPMQMKPSAYSRAPVWCGHVLGYLTRERYDRLLHYRRVNVNMVLDVNGEYIDSPCVPH
>NZ_CP041713.1|WP_028387507.1|806809_807781_+|hypothetical-protein
MHFPCKVVKIDIYPSDATIQSNSRVFSQQPSSLGELMLSSTTEYLEALRQGDFLRAVEWVEFVRQRYPGIVQNSDALLPLCTFELLNKGFTPDDIVHFEVLYALLFEEERVFQHLDFDATTLFNAGLQAWVWINAHVASQYYHRSEIPLDARACLELMQEKPEGWGDAQNNHAIEQTLLVIKARGHGRGIEVASKIRRVLEVRETLQTYEKHLRDHLAHTPDFAADSRLQALQRTLAAVMEDARVETVNARVEALAAELRRLSPRECERVWLDTLSPLPEINIGATVERARLQVVGFFERLPTLITTQLNASSSSSAAPSGSS
>NZ_CP041713.1|WP_028387508.1|807824_809237_-|hypothetical-protein
MLSELRGTYARYQYNEALEGLQKLSTFAQHNSNERLSPEFMQHFARFKEAATAIDKGNPMTPPAFKMLPHDTAFHANNKAVFVELRKMQAFYERFCKPVEPLTAPTAEQVYWSRLVRISKRPAVETDFSQIIRRIKHILEPGAHARLSDTMIHSFIDHFNRSASVLNEMLGYKAEPSHTPLQTRRKPQTFVDVNEYLRAQEQVRAASRTRSFLPWLKKAWYDAMLPLASEQTRERPDFKHYLFGYTGYQAERGGFFSDLRMLAKGALVFPAVLIKRVPRFIFSNLPAELFNYFKGAQTPDTESRGFSLMSIPETLFRGLGLLIDAAISPYVFFNRVMKFMHDKEVPFLGRRDMQWMFALNMAVLYIAASGALLLLTSLPIVALGMIASLLTDVPLVRFVDEYDSFEPAHQEINRFMAGCFTEDAEVEPETNPGLRLTTEPDHYPSPQNQGGSTVSESQAPEYPAVQPTLE
>NZ_CP041713.1|WP_115152885.1|810221_810602_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MPDGEIQTADDLFSCHIRDTLAAWCLSPQSPLNVPLEPAATPFQRVFREALLQIPAGQTVSYGELARTLRTSPRAVGQACRLNPLVLFVPCHRVVANSGLGGYMGSSAPSSVKRALLHHENFYAQQ
>NZ_CP041713.1|WP_028387511.1|810689_811055_-|50S-ribosomal-protein-L19
MTNIIDVINAEQMQGKSIPEFGPGDTVLVQVKVKEGARERLQAFEGVVIAKRNRGLNSAFTVRKISHGVGVERVFQTYSPVVDSIAVIRRGDVRRAKLYYLRNLAGRAARIREKLATKKAD
>NZ_CP041713.1|WP_081776838.1|811038_811845_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MLYLGAVSVLPEVFEGLHHGVTGRAIQRGLVQFNCWNPREWAPRPWRQVDDKPYGGGPGMVLSYEPLAAAIRHARAQMPAACRTIYLSPQGRVIRQQDLNTVAERKQPLLFIAGRYEGIDERIITRFVDEEWSLGDFVLSGGELAAMVFMDAIVRLLPGSLGHQGSAQQDSFMEGILDCPHYTRPECVEGMVVPPVLMGGNHRDIERWRRKMALGNTWLKRPDLLANMPAEGRDAQLLEEFIRERAPSSGDSAPGASFNEEQPNDKHY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

51652 : 57687

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028386561.1\|51652_52450_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	5.1e-21	33.8
WP_028386562.1\|52586_53549_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	9.4e-38	33.7
WP_135842067.1\|53558_54089_+	HAD-IIIA family hydrolase	A0A140XBD6	Dickeya_phage	2.7e-26	45.5
WP_028386564.1\|54085_54664_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_135842068.1\|54638_55163_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_028386566.1\|55159_55885_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.4e-22	31.6
WP_135842069.1\|55885_56911_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	2.5e-57	40.4
WP_135842070.1\|56910_57687_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.4e-52	45.9

DBSCAN-SWA_2

556716 : 618282

Escherichia_phage(14.29%)

tRNA,integrase,transposase

attL 603339:603398|attR 618307:619495

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_135842289.1\|556716_557928_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_135842290.1\|558145_559474_+	peptidoglycan DD-metalloendopeptidase family protein	I2E8W3	Clostridium_phage	5.3e-15	32.0
WP_135842291.1\|559474_560008_-	spore maturation protein	NA	NA	NA	NA
WP_135842292.1\|560000_560609_-	nucleoside recognition protein	NA	NA	NA	NA
WP_135842293.1\|560690_561656_+	DUF1460 domain-containing protein	NA	NA	NA	NA
WP_135842294.1\|561828_563703_-	KUP/HAK/KT family potassium transporter	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	5.1e-72	32.4
WP_028386794.1\|563784_565191_-	amino acid permease	NA	NA	NA	NA
WP_135842295.1\|565495_566707_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.1e-51	33.1
WP_135842296.1\|566719_568000_-	C4-dicarboxylate transporter DctA	NA	NA	NA	NA
WP_028386792.1\|568213_568807_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	E9KZD2	Cassava_brown_streak_virus	9.0e-07	40.5
WP_135842297.1\|568814_569258_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_135842298.1\|569254_570952_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_035902822.1\|570952_572350_-	phosphomannomutase/phosphoglucomutase	NA	NA	NA	NA
WP_028386788.1\|572353_572812_-	dUTP diphosphatase	Q2NP83	Xanthomonas_phage	3.3e-49	62.3
WP_135842299.1\|572780_574034_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	3.7e-42	33.8
WP_135842300.1\|574407_575958_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_051550956.1\|575954_577058_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_115152879.1\|577129_578455_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	2.4e-23	27.2
WP_135842301.1\|578543_579485_+	response regulator	NA	NA	NA	NA
WP_135842302.1\|579548_579884_-\|tRNA	tRNA-binding protein	NA	NA	NA	NA
WP_135842303.1\|579979_580795_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_135842304.1\|580794_581418_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_135842305.1\|581500_582685_+	hypothetical protein	NA	NA	NA	NA
WP_135842306.1\|582738_583563_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_135842917.1\|583542_584457_-	TIGR01777 family protein	NA	NA	NA	NA
WP_028386761.1\|584597_585956_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_028386762.1\|585985_587524_-	cryptochrome/photolyase family protein	E3T4R9	Cafeteria_roenbergensis_virus	2.3e-54	29.1
WP_028386763.1\|587520_588000_-	tryptophan-rich sensory protein	NA	NA	NA	NA
WP_028386764.1\|588014_589604_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_028386765.1\|589760_590987_-	hypothetical protein	NA	NA	NA	NA
WP_035902760.1\|591324_591609_-	DUF3175 domain-containing protein	A0A0F6TH17	Sinorhizobium_phage	1.5e-15	55.6
WP_135842307.1\|592913_593237_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_135842308.1\|595187_597971_-	DEAD/DEAH box helicase family protein	A0A0P0YML3	Yellowstone_lake_phycodnavirus	1.1e-30	29.9
WP_135842309.1\|598579_601057_-	hypothetical protein	NA	NA	NA	NA
WP_135842310.1\|602237_603362_+\|integrase	site-specific integrase	A0A2D1GLL1	Escherichia_phage	6.9e-40	29.2
603339:603398	attL	NA	NA	NA	NA
WP_115152790.1\|603422_604508_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_058387052.1\|604711_606169_+	AAA family ATPase	NA	NA	NA	NA
WP_082635015.1\|606295_607009_-	RraA family protein	NA	NA	NA	NA
WP_058387053.1\|607218_608049_+	DUF4111 domain-containing protein	NA	NA	NA	NA
WP_058387002.1\|608176_609067_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_058387003.1\|609123_609630_-	antirestriction protein ArdA	A0A1B1IVX9	uncultured_Mediterranean_phage	6.5e-22	43.1
WP_058387004.1\|609697_610123_-	single-stranded DNA-binding protein	A0A088FRR2	Escherichia_phage	1.8e-17	42.5
WP_058387005.1\|610221_610422_-	hypothetical protein	NA	NA	NA	NA
WP_058387006.1\|611091_612033_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_058387007.1\|612102_612789_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_058387054.1\|612790_613264_+	GNAT family N-acetyltransferase	A0A1B2IDV4	Erwinia_phage	6.7e-05	32.0
WP_058387008.1\|613484_614384_-\|integrase	integrase	NA	NA	NA	NA
WP_058387009.1\|614376_615183_-\|integrase	integrase	NA	NA	NA	NA
WP_058387010.1\|615766_616741_-	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_143934459.1\|616794_617085_-	hypothetical protein	NA	NA	NA	NA
WP_115152790.1\|617196_618282_-\|transposase	IS4 family transposase	NA	NA	NA	NA
618307:619495	attR	NA	NA	NA	NA

DBSCAN-SWA_3

665058 : 705803

Acinetobacter_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_115152790.1\|665058_666144_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_115152847.1\|666198_666567_+	VOC family protein	NA	NA	NA	NA
WP_135100410.1\|668550_671451_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_058387085.1\|671518_671761_-	hypothetical protein	NA	NA	NA	NA
WP_058387084.1\|671778_673266_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	3.1e-24	24.4
WP_058387083.1\|673396_674698_+	hypothetical protein	NA	NA	NA	NA
WP_058387082.1\|674665_675466_-	methylase	NA	NA	NA	NA
WP_058387081.1\|675855_676068_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_058387080.1\|676097_676655_-	hypothetical protein	NA	NA	NA	NA
WP_135842314.1\|676654_677482_-	hypothetical protein	NA	NA	NA	NA
WP_028386438.1\|677903_678896_-	malate dehydrogenase	NA	NA	NA	NA
WP_028386437.1\|678892_679447_-	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_135842315.1\|679529_680660_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_035902197.1\|680703_681312_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_028386435.1\|681316_682336_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	9.8e-94	53.6
WP_028386434.1\|682490_682718_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_028386433.1\|682721_683168_+	GatB/YqeY domain-containing protein	NA	NA	NA	NA
WP_135842316.1\|683174_684899_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	6.3e-61	39.6
WP_115152851.1\|685012_686908_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	3.5e-36	33.1
WP_135842317.1\|687134_687416_-	hypothetical protein	NA	NA	NA	NA
WP_135842318.1\|687502_687874_+\|transposase	transposase	NA	NA	NA	NA
WP_135842319.1\|688584_688938_-	IS66 family insertion sequence element accessory protein TnpB	S5WJH4	Leptospira_phage	2.1e-11	38.7
WP_135842320.1\|688931_689261_-	hypothetical protein	NA	NA	NA	NA
WP_135842321.1\|689362_690226_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	7.1e-45	34.7
WP_135842322.1\|690622_690952_+	hypothetical protein	NA	NA	NA	NA
WP_058387102.1\|691058_691901_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-18	31.2
WP_115152800.1\|691887_692181_-	hypothetical protein	NA	NA	NA	NA
WP_135842323.1\|692283_693000_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_135842324.1\|693523_694222_-	hypothetical protein	NA	NA	NA	NA
WP_135842325.1\|694621_695098_-	DUF1398 domain-containing protein	NA	NA	NA	NA
WP_135842326.1\|695231_696299_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_135842327.1\|696636_697368_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_135842328.1\|697364_697904_-	AMP-binding protein	NA	NA	NA	NA
WP_115152790.1\|697902_698988_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_135842329.1\|698928_702015_-	MFS transporter	NA	NA	NA	NA
WP_135842330.1\|702087_702885_-	DUF2145 domain-containing protein	NA	NA	NA	NA
WP_135842331.1\|702899_703298_-	hypothetical protein	NA	NA	NA	NA
WP_081776729.1\|703780_704941_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_131793748.1\|705084_705417_-	hypothetical protein	NA	NA	NA	NA
WP_135842332.1\|705458_705803_+\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1540119 : 1588677

Acinetobacter_phage(33.33%)

integrase,transposase

attL 1566838:1566897|attR 1591655:1593028

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058387102.1\|1540119_1540962_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-18	31.2
WP_135842585.1\|1541133_1543140_-	EAL domain-containing protein	NA	NA	NA	NA
WP_028385866.1\|1543151_1543688_-	hypothetical protein	NA	NA	NA	NA
WP_051550815.1\|1543993_1544695_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_028385864.1\|1544725_1545223_-	AAA family ATPase	NA	NA	NA	NA
WP_051550814.1\|1545228_1546008_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_028385863.1\|1546059_1547136_-	hypothetical protein	NA	NA	NA	NA
WP_028385862.1\|1547161_1547626_-	hypothetical protein	NA	NA	NA	NA
WP_035901790.1\|1547703_1548372_-	HAD family phosphatase	NA	NA	NA	NA
WP_135842586.1\|1548531_1549224_+	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	8.0e-15	31.2
WP_028385859.1\|1549327_1550404_+	hypothetical protein	NA	NA	NA	NA
WP_135842587.1\|1550502_1551813_+	hypothetical protein	NA	NA	NA	NA
WP_135842588.1\|1552329_1553790_+	hypothetical protein	NA	NA	NA	NA
WP_131793742.1\|1553845_1554607_+	hypothetical protein	NA	NA	NA	NA
WP_143934465.1\|1555887_1556427_+	hypothetical protein	NA	NA	NA	NA
WP_028385854.1\|1556412_1556655_-	hypothetical protein	NA	NA	NA	NA
WP_028385853.1\|1556922_1557672_-	queuosine precursor transporter	NA	NA	NA	NA
WP_135842930.1\|1557692_1558292_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_115152799.1\|1558582_1559738_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-52	40.6
WP_135842590.1\|1559945_1561115_-	hypothetical protein	NA	NA	NA	NA
WP_028385848.1\|1561375_1562386_-	hypothetical protein	NA	NA	NA	NA
WP_028386907.1\|1563164_1563632_+	fasciclin domain-containing protein	NA	NA	NA	NA
WP_028386906.1\|1563703_1564144_-	DUF3429 domain-containing protein	NA	NA	NA	NA
WP_135842931.1\|1564453_1565317_-	virulence protein RhuM/Fic/DOC family protein	Q9JMN3	Wolbachia_phage	1.4e-21	54.3
WP_115152790.1\|1565458_1566544_+\|transposase	IS4 family transposase	NA	NA	NA	NA
1566838:1566897	attL	NA	NA	NA	NA
WP_115152800.1\|1566913_1567207_+	hypothetical protein	NA	NA	NA	NA
WP_058387102.1\|1567193_1568036_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-18	31.2
WP_135842591.1\|1568228_1568486_+	diguanylate cyclase	NA	NA	NA	NA
WP_061401123.1\|1568618_1568894_+	metal-sensitive transcriptional regulator	NA	NA	NA	NA
WP_135842932.1\|1568902_1571101_+	cadmium-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.7e-96	38.0
WP_135842592.1\|1571145_1572456_+	TolC family protein	NA	NA	NA	NA
WP_135842593.1\|1572452_1573424_+	efflux RND transporter periplasmic adaptor subunit	S5VL44	Leptospira_phage	2.0e-11	26.7
WP_135842594.1\|1573423_1576639_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_135842595.1\|1576635_1577085_+	transporter	NA	NA	NA	NA
WP_135842596.1\|1577096_1578548_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_135842597.1\|1578581_1578911_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_135842933.1\|1578912_1579191_-	DUF305 domain-containing protein	NA	NA	NA	NA
WP_135842598.1\|1579311_1579770_-	response regulator	NA	NA	NA	NA
WP_135842599.1\|1581059_1581449_-	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_135842600.1\|1581695_1581965_-	hypothetical protein	NA	NA	NA	NA
WP_135842601.1\|1582606_1583566_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_135842602.1\|1583570_1583939_-	group 1 truncated hemoglobin	NA	NA	NA	NA
WP_135842603.1\|1584021_1584456_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_135842604.1\|1584505_1585090_-\|integrase	site-specific integrase	K4K5C2	Caulobacter_virus	2.4e-12	31.1
WP_135842605.1\|1585430_1586093_+	DNA-binding protein	NA	NA	NA	NA
WP_135842606.1\|1586145_1587657_-	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_135842607.1\|1587753_1588677_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.5e-29	34.6
1591655:1593028	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041714

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP041713

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection