CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP037927	Klebsiella pneumoniae strain CRKP I chromosome, complete genome	3 crisprs	cas3,DEDDh,WYL,DinG,RT,csa3	0	1	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP037927_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP037927_1

794118-794203

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP037927_1

>merge|NZ_CP037927|1|794118-794203|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP037927|1|1|794118-794203|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP037927.1\|WP_002888347.1\|795844_796384_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP037927.1\|WP_002888332.1\|790802_791630_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP037927.1\|WP_002888345.1\|794300_795665_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP037927.1\|WP_002888324.1\|785056_785878_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP037927.1\|WP_004151368.1\|797130_800037_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP037927.1\|WP_002888348.1\|796458_797118_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP037927.1\|WP_002888373.1\|808124_808892_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP037927.1\|WP_002888327.1\|785874_786864_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP037927.1\|WP_002888370.1\|807150_807996_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP037927.1\|WP_002888349.1\|800224_802582_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP037927.1\|WP_002888353.1\|802757_803453_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP037927.1\|WP_002888337.1\|791662_792361_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP037927.1\|WP_002888368.1\|805103_806813_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP037927.1\|WP_002888357.1\|803590_805093_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP037927.1\|WP_004147026.1\|788210_790559_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP037927.1\|WP_002888323.1\|784676_785054_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP037927.1\|WP_002888340.1\|792350_793976_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP037927.1\|WP_002888329.1\|786869_788156_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP037927.1\|WP_002888321.1\|783823_784672_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP037927.1\|WP_002888320.1\|783088_783568_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714

Protein	Function_ID	Function_description	E-value
NZ_CP037927.1\|WP_002888347.1\|795844_796384_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP037927.1\|WP_002888332.1\|790802_791630_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP037927.1\|WP_002888345.1\|794300_795665_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP037927.1\|WP_002888324.1\|785056_785878_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP037927.1\|WP_004151368.1\|797130_800037_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP037927.1\|WP_002888348.1\|796458_797118_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP037927.1\|WP_002888373.1\|808124_808892_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP037927.1\|WP_002888327.1\|785874_786864_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP037927.1\|WP_002888370.1\|807150_807996_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP037927.1\|WP_002888349.1\|800224_802582_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP037927.1\|WP_002888353.1\|802757_803453_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP037927.1\|WP_002888337.1\|791662_792361_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP037927.1\|WP_002888368.1\|805103_806813_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP037927.1\|WP_002888357.1\|803590_805093_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP037927.1\|WP_004147026.1\|788210_790559_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP037927.1\|WP_002888323.1\|784676_785054_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP037927.1\|WP_002888340.1\|792350_793976_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP037927.1\|WP_002888329.1\|786869_788156_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP037927.1\|WP_002888321.1\|783823_784672_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP037927.1\|WP_002888320.1\|783088_783568_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127

>NZ_CP037927.1|WP_002888340.1|792350_793976_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP037927.1|WP_002888337.1|791662_792361_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP037927.1|WP_002888332.1|790802_791630_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP037927.1|WP_004147026.1|788210_790559_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP037927.1|WP_002888329.1|786869_788156_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP037927.1|WP_002888327.1|785874_786864_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP037927.1|WP_002888324.1|785056_785878_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP037927.1|WP_002888323.1|784676_785054_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP037927.1|WP_002888321.1|783823_784672_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP037927.1|WP_002888320.1|783088_783568_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP037927.1|WP_002888345.1|794300_795665_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP037927.1|WP_002888347.1|795844_796384_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP037927.1|WP_002888348.1|796458_797118_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP037927.1|WP_004151368.1|797130_800037_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP037927.1|WP_002888349.1|800224_802582_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP037927.1|WP_002888353.1|802757_803453_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP037927.1|WP_002888357.1|803590_805093_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP037927.1|WP_002888368.1|805103_806813_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP037927.1|WP_002888370.1|807150_807996_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP037927.1|WP_002888373.1|808124_808892_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP037927_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP037927_2

1280591-1280686

Orphan

Consensus_repeat	Method
TTGTGCCAACAGAATGCCAACAAAGTGCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP037927_2

>merge|NZ_CP037927|2|1280591-1280686|CRISPRCasFinder
TTGTGCCAACAGAATGCCAACAAAGTGCCAACGCAAACCCAGTAACCACGCTGCGTACCGGCGAGGTTGTGCCAACAGAATGCCAACAAAGTGCCA

>NZ_CP037927|2|2|1280591-1280686|CRISPRCasFinder
TTGTGCCAACAGAATGCCAACAAAGTGCCA	ACGCAAACCCAGTAACCACGCTGCGTACCGGCGAGG
TTGTGCCAACAGAATGCCAACAAAGTGCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP037927.1\|WP_014342893.1\|1276895_1277180_-\|host-nuclease-inhibitor-GamL	unknown	unknown	unknown
NZ_CP037927.1\|WP_004151288.1\|1286192_1286648_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182057
NZ_CP037927.1\|WP_004151294.1\|1282805_1283312_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_039108792.1\|1278144_1278492_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_041937862.1\|1284223_1284742_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_014342898.1\|1283549_1284224_+\|ead/Ea22-like-family-protein	unknown	unknown	gnl\|CDD\|379401
NZ_CP037927.1\|WP_014342889.1\|1275082_1275610_-\|phage-N-6-adenine-methyltransferase	unknown	unknown	gnl\|CDD\|368643
NZ_CP037927.1\|WP_014342890.1\|1275761_1276385_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378216
NZ_CP037927.1\|WP_041937861.1\|1287445_1287625_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_004151296.1\|1281085_1282516_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP037927.1\|WP_014342900.1\|1286810_1287449_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368603
NZ_CP037927.1\|WP_014342888.1\|1274315_1275086_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_071646962.1\|1277260_1277467_-\|cell-division-inhibitor-protein	unknown	unknown	gnl\|CDD\|236900
NZ_CP037927.1\|WP_041937863.1\|1278692_1279415_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP037927.1\|WP_023342724.1\|1286647_1286818_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182029
NZ_CP037927.1\|WP_004194000.1\|1279483_1279711_+\|Cro/Cl-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP037927.1\|WP_032419573.1\|1283308_1283557_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_004151295.1\|1282515_1282809_+\|protein-ren	unknown	unknown	gnl\|CDD\|238042
NZ_CP037927.1\|WP_001548453.1\|1279750_1279972_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP037927.1\|WP_071570658.1\|1275606_1275765_-\|DUF1317-family-protein	unknown	unknown	gnl\|CDD\|284449

Protein	Function_ID	Function_description	E-value
NZ_CP037927.1\|WP_014342898.1\|1283549_1284224_+\|ead/Ea22-like-family-protein	gnl\|CDD\|379401	pfam13935, Ead_Ea22, Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	1.85184e-05
NZ_CP037927.1\|WP_014342889.1\|1275082_1275610_-\|phage-N-6-adenine-methyltransferase	gnl\|CDD\|368643	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam). This family consists of several bacterial and phage DNA N-6-adenine-methyltransferase (Dam) like sequences.	1.45494e-82
NZ_CP037927.1\|WP_014342890.1\|1275761_1276385_-\|hypothetical-protein	gnl\|CDD\|378216	pfam09588, YqaJ, YqaJ-like viral recombinase domain. This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA in a Mg(2+)-dependent reaction, It has a preference for 5'-phosphorylated DNA ends. It thus forms part of the two-component SynExo viral recombinase functional unit.	4.51441e-15
NZ_CP037927.1\|WP_004151296.1\|1281085_1282516_+\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	7.87266e-159
NZ_CP037927.1\|WP_014342900.1\|1286810_1287449_+\|hypothetical-protein	gnl\|CDD\|368603	pfam05766, NinG, Bacteriophage Lambda NinG protein. NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.	1.46189e-56
NZ_CP037927.1\|WP_071646962.1\|1277260_1277467_-\|cell-division-inhibitor-protein	gnl\|CDD\|236900	PRK11354, kil, FtsZ inhibitor protein; Reviewed.	4.6337e-15
NZ_CP037927.1\|WP_041937863.1\|1278692_1279415_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	2.1038e-19
NZ_CP037927.1\|WP_023342724.1\|1286647_1286818_+\|hypothetical-protein	gnl\|CDD\|182029	PRK09689, PRK09689, prophage protein NinE; Provisional.	2.38423e-20
NZ_CP037927.1\|WP_004151288.1\|1286192_1286648_+\|hypothetical-protein	gnl\|CDD\|182057	PRK09741, PRK09741, hypothetical protein; Provisional.	1.50704e-78
NZ_CP037927.1\|WP_004151295.1\|1282515_1282809_+\|protein-ren	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	0.000668668
NZ_CP037927.1\|WP_001548453.1\|1279750_1279972_+\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	1.55058e-09
NZ_CP037927.1\|WP_071570658.1\|1275606_1275765_-\|DUF1317-family-protein	gnl\|CDD\|284449	pfam07026, DUF1317, Protein of unknown function (DUF1317). This family consists of several hypothetical bacterial and phage proteins of around 60 residues in length. The function of this family is unknown.	2.75612e-20

>NZ_CP037927.1|WP_001548453.1|1279750_1279972_+|hypothetical-protein
MESSTTRNKVEARRIESWLHSQIAELGTTNIAKVAGVNKSTVSRWRESLLPNMSLLLAILISNRPGEKGDFEA
>NZ_CP037927.1|WP_004194000.1|1279483_1279711_+|Cro/Cl-family-transcriptional-regulator
MAPNSLGEIIKKIRVPVVAEACGCSPRAIYKWIANGSLPRTDYTDETNYAEKIALASGGQFTAAQIREVSKPKAA
>NZ_CP037927.1|WP_041937863.1|1278692_1279415_-|helix-turn-helix-transcriptional-regulator
MIEHMVHEERARKEFSQRLALACDKAGLIPHGRQAEIAKRMKLTPKAVSKWFNGESIPRRGTLKALASHIGTSASYLLGDVDEDGIDTETTTTLKDVFRIDLLDITVSAGPGVINQEFVEILHSVEYAPAEARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDISVKSFDGDGIYAFLYDDTAHVKRLQKMKDKLLVISDNKSYAAWDPIEKDEMNRVFVFGKVIGSMPQTYRKHG
>NZ_CP037927.1|WP_039108792.1|1278144_1278492_-|hypothetical-protein
MSHEFRDAVKVDGAEASIEEKQLYQVQIAVKSLIDFVVTSFEQLGIEKLHELVDPSLDELHEIILKLDNKAKELGALDLQQVLLTAQILIRDIKDKNPDMCAIGSRTLKRATIFK
>NZ_CP037927.1|WP_071646962.1|1277260_1277467_-|cell-division-inhibitor-protein
MVSHHYGTQTVNRGAVLPGMLVKHREITWTASANKRGRLYLHRGIERTYTTDLLVEVYLNGLGQGLSR
>NZ_CP037927.1|WP_014342893.1|1276895_1277180_-|host-nuclease-inhibitor-GamL
MNAYRAYDVIEERKWAEQTLDEEKEKWIEDRAKEVFDSLPEDPYVALRQSASSKAFPYEGLRSDKAVEVYNDLRTAIAYAQAEYDWDHRTGCPF
>NZ_CP037927.1|WP_014342890.1|1275761_1276385_-|hypothetical-protein
MIWHDVEQNGEEWDALRLGKATASNFGLIMANDGKAFGEPAKRYALQLALEQIKGCKSEFGFTNDHMERGHEQEPIARMLYEEMNFVDVDNGGFFDHETYGDSPDGLVGRDGLVEIKSVIAATHYATLTRGAFDPAYRWQLIGHLDCSGRDWVDFISYCSDFPDGKQLIVYRLTAAECQSEIARLRARRNEFLSLVAETKRMILEIE
>NZ_CP037927.1|WP_071570658.1|1275606_1275765_-|DUF1317-family-protein
MKHYRDAITVGKVKCMYSVLHRGWLMPSGEVVRNPLKAQRLAEELDKKRGAQ
>NZ_CP037927.1|WP_014342889.1|1275082_1275610_-|phage-N-6-adenine-methyltransferase
MTDYGGSKTPKNERDYWQTPIEIFNALDREFGFWLDAAASESNALCAHYITELDDSLNSEWTSYGAIWCNPPYSDIGPWVEKAAEQSRAQSQAVVMLLPADISTGWFISAMQSADELRLITGGRVQFVPASVTGKRKSNPKGSLLFIWRPYITPRHIITTVSLTELKRIGNLEAA
>NZ_CP037927.1|WP_014342888.1|1274315_1275086_-|hypothetical-protein
MSKGTIICLCDITGVMAEPWVEAGYRAVLVDPQHPETSIDGPVERISATILEAMPRLSQIIRSENIVIVIGFPPCTDVAVSGSRWFESKRAKDPHFQGKAALVAEQCRMVGLAAGCPWAFENPVSVFSSIFGSADYTFHPYQFTGLCADDNYTKQTCLWTGNGFKAPAENMHPMVEAAIDAVKLACGRMMPKKKAIEAISGTSFAGLVTDWYPDNRIHECPPSDERANIRSATPLGFARAVFLSNAPHLNKKREAA
>NZ_CP037927.1|WP_004151296.1|1281085_1282516_+|AAA-family-ATPase
MTSDFMTPPHSIEAEQSVLGGLLLDDDNSERTQKVLSILKPESFYARPHQVIFAEMRQMYRDHKPVDLLTLFDALESKGLTETVGGFAYLAEMSKNTPSAANIVAYAMRVRETAMERYGIEKTTKAIELLYARNGMTAEQKFDAIQGLFTEITEHVKTGRRTGLRTFYDAVTDWSAEFDERLKPDGRSRGLSTGIRSLDELLGVKRIVRGSLFVIGARPKMGKTTLYTQMGINCATVENEPALMFSLEMPEGQMVEKITAQKGRISPNLFYPDMTKDDYGYRGDWNSDLQKATGVMGALIETNNLLIDDTPGISLAHVMAESRRIKRERGKVGMILVDYLTLMTADKAERNDLAYGLITKGLKILAKELDCVVVLLTQLNRDLEKRTNKRPLPSDSRDTGQIEQDCDYWLAIYREGAYDENANQSDTELLLRLNRHGETGVVYCEQRHGAIYDCDQEAASQRRREKEQKPTKRGGF
>NZ_CP037927.1|WP_004151295.1|1282515_1282809_+|protein-ren
MTGKDAILNYLKTHKTCSSPDVAAASGMTHTCINQAANILAKQGVLVAEARVWRTVYYRLATEEEIAGRKSTNQIFNECRQSPAMKRVLAVYGRTSA
>NZ_CP037927.1|WP_004151294.1|1282805_1283312_+|hypothetical-protein
MTITLQAVNKLIASMESAGELSIREQKFLKLAKEFRICSASLDAAIKTGNMLADQNAQLAAENVALKDINAWCKTDAFKNMYREFKTAEALGCSDADCMHDAMLVAIMHAPATPATDRIVAGIKADGVEEFAAKLRIPGDDQFFDALAKGIALAADDFAKQLREGADK
>NZ_CP037927.1|WP_032419573.1|1283308_1283557_+|hypothetical-protein
MSRNDFRRPIAEHISNIRSELAKIPAEKRLHVIAEALYDMNPTGDDEVLRASCGCYEWDISMDYRSADIRYADKNKQEVQHD
>NZ_CP037927.1|WP_014342898.1|1283549_1284224_+|ead/Ea22-like-family-protein
MTDITELAQSLKAAAEKASNGDWVKESGDGWEACCSANDQANGGFIIAHFVGPDAAENREFVQAANPANVLALVEALEYYKSREERVTSLVRDNSKSWDELYRQVEAKGKRNVELVEALESEKRICATWRKTAEANSEKLEKAQQQMTESENRVRKQNRHICELFDDNTALRQRIAGLEARTVKLPDLRQIVSGDRYVWSDGVYNYSQDVKVALAAAGIKVEAE
>NZ_CP037927.1|WP_041937862.1|1284223_1284742_+|hypothetical-protein
MALTHDELCQIAYQFLKRNGFKVCFHDRFVAVTSTGEQPDAMGFRNFASCLIEAKCSRADLLADRKKRFRIRPELGMGDWRFFISEPGIISVEDLPPGWGLLHVVNGKVRKVHGWPQGNCCWGNAEDKPFTGNKQVECDYMLSALRRMELRGHLNEIYDGVIVNRAAEGANQ
>NZ_CP037927.1|WP_004151288.1|1286192_1286648_+|hypothetical-protein
MNIPQCGIKLHNGNFSAIGKILQEQLSDGKCLRLQVKEWREKRSLSQNALSHMWYAEISEYLINSGRTDATPEWVKRNLKKTYLGCEEVTYTDFITGEKTTTWEPRHTSDLDTGEMHIFLTKVEAWCAQFGLALTIPHGCEYQQLQQKQEA
>NZ_CP037927.1|WP_023342724.1|1286647_1286818_+|hypothetical-protein
MSSLLAKVMERGIFRVPARRKRKVEVKPSDIPTLKDYTARLVDKKWLRLRARRPHA
>NZ_CP037927.1|WP_014342900.1|1286810_1287449_+|hypothetical-protein
MRKPARRKCAHCREWFHPAREGQVVCSFECASAIGKKQTAKAREAAKARAVKRQRESEKEGRQRRRAKRESFKTKAQWDKEAQSAFNRYIRIRDEGKPCVSCGNPLIGKSNYLTGSAIDASHYRSRGAASHLKFNVFNVHSACTRCNRQLSGNAVEYRIHLIERIGLDRVERLEADNEPRRFDIPYLQRIKSIFTRKARALEKRRARQQEAA
>NZ_CP037927.1|WP_041937861.1|1287445_1287625_+|hypothetical-protein
MSTHNTLALLNWYRSKHVAAVKTPAGIVFMGMRNVTADQRRTLPAIPQADLEAALRIQQ

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP037927_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP037927_3

1668953-1669030

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP037927_3

>merge|NZ_CP037927|3|1668953-1669030|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP037927|3|3|1668953-1669030|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP037927.1\|WP_002895420.1\|1665396_1666923_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP037927.1\|WP_004151696.1\|1659072_1660356_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP037927.1\|WP_002895655.1\|1676255_1678277_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP037927.1\|WP_004142100.1\|1673410_1674166_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP037927.1\|WP_002895280.1\|1655982_1656195_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|313818
NZ_CP037927.1\|WP_002895283.1\|1656930_1657437_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_002895358.1\|1662844_1663570_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP037927.1\|WP_004151700.1\|1672269_1673427_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP037927.1\|WP_002895284.1\|1657453_1658377_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225813
NZ_CP037927.1\|WP_002895578.1\|1669729_1671019_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP037927.1\|WP_002895575.1\|1669182_1669659_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP037927.1\|WP_002895580.1\|1671232_1672273_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP037927.1\|WP_004151697.1\|1660612_1661830_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP037927.1\|WP_002895648.1\|1674158_1674881_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP037927.1\|WP_004147672.1\|1667021_1668404_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP037927.1\|WP_004151698.1\|1661826_1662783_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP037927.1\|WP_004152853.1\|1674822_1675545_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP037927.1\|WP_004151701.1\|1678454_1678547_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_002895652.1\|1675631_1675844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP037927.1\|WP_004151695.1\|1655346_1655901_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715

Protein	Function_ID	Function_description	E-value
NZ_CP037927.1\|WP_002895420.1\|1665396_1666923_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP037927.1\|WP_004151696.1\|1659072_1660356_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP037927.1\|WP_002895655.1\|1676255_1678277_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP037927.1\|WP_004142100.1\|1673410_1674166_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP037927.1\|WP_002895280.1\|1655982_1656195_-\|hypothetical-protein	gnl\|CDD\|313818	pfam10684, BDM, Putative biofilm-dependent modulation protein. This is a family of tightly conserved proteins from Enterobacteriaceae which are annotated as being biofilm-dependent modulation protein homologs.	0.00154989
NZ_CP037927.1\|WP_002895358.1\|1662844_1663570_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP037927.1\|WP_004151700.1\|1672269_1673427_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP037927.1\|WP_002895284.1\|1657453_1658377_-\|acyltransferase-family-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09
NZ_CP037927.1\|WP_002895578.1\|1669729_1671019_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP037927.1\|WP_002895575.1\|1669182_1669659_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP037927.1\|WP_002895580.1\|1671232_1672273_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP037927.1\|WP_004151697.1\|1660612_1661830_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP037927.1\|WP_002895648.1\|1674158_1674881_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP037927.1\|WP_004147672.1\|1667021_1668404_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP037927.1\|WP_004151698.1\|1661826_1662783_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
NZ_CP037927.1\|WP_004152853.1\|1674822_1675545_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
NZ_CP037927.1\|WP_004151695.1\|1655346_1655901_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.87295e-09

>NZ_CP037927.1|WP_004147672.1|1667021_1668404_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP037927.1|WP_002895420.1|1665396_1666923_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP037927.1|WP_002895358.1|1662844_1663570_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP037927.1|WP_004151698.1|1661826_1662783_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>NZ_CP037927.1|WP_004151697.1|1660612_1661830_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP037927.1|WP_004151696.1|1659072_1660356_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP037927.1|WP_002895284.1|1657453_1658377_-|acyltransferase-family-protein
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>NZ_CP037927.1|WP_002895283.1|1656930_1657437_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>NZ_CP037927.1|WP_002895280.1|1655982_1656195_-|hypothetical-protein
MHIKNTIPAEFVFNSALMKNIENTLIKQHRTVNNERMITEIQHRLQTESNEILSDLYLQALDMLYSKPHH
>NZ_CP037927.1|WP_004151695.1|1655346_1655901_-|helix-turn-helix-transcriptional-regulator
MSHHNTCYRSEHYDLWFDNGFLLYGMSLILNSLPASYFRKKHVFFTSDNYFAVLQHNYNRRDTLFILLTEGNDLNFLSELPMLRLPANSTPEELKIFLHQPTRYYKTHPAPGASVQFTEREKKVIQLISNGEAVASIGRSLNLHIKTIYQIRLNLIKKLGCSGRTDFFNISRSETFKSWSQIHL
>NZ_CP037927.1|WP_002895575.1|1669182_1669659_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP037927.1|WP_002895578.1|1669729_1671019_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP037927.1|WP_002895580.1|1671232_1672273_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP037927.1|WP_004151700.1|1672269_1673427_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP037927.1|WP_004142100.1|1673410_1674166_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP037927.1|WP_002895648.1|1674158_1674881_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP037927.1|WP_004152853.1|1674822_1675545_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP037927.1|WP_002895652.1|1675631_1675844_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP037927.1|WP_002895655.1|1676255_1678277_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP037927.1|WP_004151701.1|1678454_1678547_+|hypothetical-protein
MQKINFREYLAVATALVIIVAFFHQWVLTF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP037927_2	2.1\|1280621\|36\|NZ_CP037927\|CRISPRCasFinder	1280621-1280656	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	1.0
NZ_CP037927_2	2.1\|1280621\|36\|NZ_CP037927\|CRISPRCasFinder	1280621-1280656	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	1.0
NZ_CP037927_2	2.1\|1280621\|36\|NZ_CP037927\|CRISPRCasFinder	1280621-1280656	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	1.0

1. spacer 2.1|1280621|36|NZ_CP037927|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

2. spacer 2.1|1280621|36|NZ_CP037927|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

3. spacer 2.1|1280621|36|NZ_CP037927|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

570231 : 577613

Enterobacteria_phage(83.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012579081.1\|570231_571155_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
WP_004152202.1\|571788_572355_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
WP_004152203.1\|572372_572618_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152204.1\|572614_573352_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
WP_004153681.1\|574175_574724_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
WP_004152205.1\|574720_574948_+	hypothetical protein	NA	NA	NA	NA
WP_004152206.1\|574944_575265_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_014342869.1\|575279_577613_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9

DBSCAN-SWA_2

1048355 : 1060012

Enterobacteria_phage(70.0%)

integrase

attL 1036489:1036503|attR 1059549:1059563

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1036489:1036503	attL	NA	NA	NA	NA
WP_014342877.1\|1048355_1050689_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.4
WP_004152206.1\|1050703_1051024_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889911.1\|1051020_1051248_-	hypothetical protein	NA	NA	NA	NA
WP_024940872.1\|1051244_1051802_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889915.1\|1051798_1052065_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_002889917.1\|1052606_1053344_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
WP_002889919.1\|1053340_1053586_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_002889930.1\|1053603_1054170_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_004152979.1\|1054738_1055164_-	hypothetical protein	NA	NA	NA	NA
WP_004152029.1\|1055163_1056114_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_002889938.1\|1056101_1057292_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_002889940.1\|1057644_1058898_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_004144574.1\|1058908_1060012_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
1059549:1059563	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1259741 : 1317040

Escherichia_phage(18.87%)

protease,transposase,integrase,tRNA,capsid,terminase

attL 1272447:1272493|attR 1322850:1322896

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002892267.1\|1259741_1260368_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_004151324.1\|1260335_1261022_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-31	35.7
WP_004147400.1\|1261018_1263433_+	ABC transporter permease	NA	NA	NA	NA
WP_004142997.1\|1263614_1264760_+	porin	NA	NA	NA	NA
WP_004151323.1\|1264867_1265944_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_004143002.1\|1266055_1267123_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_004151322.1\|1267119_1267629_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_004151321.1\|1267725_1268064_-	hypothetical protein	NA	NA	NA	NA
WP_004151320.1\|1268171_1268894_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_004151319.1\|1268897_1269392_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_004143010.1\|1269567_1270953_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
WP_004143016.1\|1270995_1271208_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143017.1\|1271209_1272076_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
1272447:1272493	attL	NA	NA	NA	NA
WP_004151318.1\|1272506_1273670_-\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	3.3e-202	87.3
WP_004151317.1\|1273546_1273882_-	excisionase family DNA-binding protein	NA	NA	NA	NA
WP_004151316.1\|1273883_1274099_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	4.0e-13	52.9
WP_004151314.1\|1274100_1274319_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.2e-09	47.2
WP_014342888.1\|1274315_1275086_-	hypothetical protein	D5LH17	Escherichia_phage	8.5e-66	52.0
WP_014342889.1\|1275082_1275610_-	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	6.4e-57	61.0
WP_071570658.1\|1275606_1275765_-	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	5.1e-10	60.8
WP_014342890.1\|1275761_1276385_-	hypothetical protein	S0A2A9	Cellulophaga_phage	1.3e-45	48.1
WP_014342893.1\|1276895_1277180_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.5e-28	61.7
WP_071646962.1\|1277260_1277467_-	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	3.1e-31	94.1
WP_039108792.1\|1278144_1278492_-	hypothetical protein	NA	NA	NA	NA
WP_041937863.1\|1278692_1279415_-	helix-turn-helix transcriptional regulator	E7C9R0	Salmonella_phage	9.4e-75	63.2
WP_004194000.1\|1279483_1279711_+	Cro/Cl family transcriptional regulator	A0A2I6PIE5	Escherichia_phage	1.9e-18	61.2
WP_001548453.1\|1279750_1279972_+	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_004151297.1\|1280196_1281096_+	hypothetical protein	F1C5C3	Cronobacter_phage	5.4e-88	54.9
WP_004151296.1\|1281085_1282516_+	AAA family ATPase	Q9MCT4	Escherichia_phage	2.6e-185	66.7
WP_004151295.1\|1282515_1282809_+	protein ren	O48423	Enterobacteria_phage	3.3e-26	65.6
WP_004151294.1\|1282805_1283312_+	hypothetical protein	A0A0A6Z565	Enterobacter_phage	3.0e-27	59.6
WP_032419573.1\|1283308_1283557_+	hypothetical protein	NA	NA	NA	NA
WP_014342898.1\|1283549_1284224_+	ead/Ea22-like family protein	C6ZR30	Salmonella_phage	7.8e-07	63.0
WP_041937862.1\|1284223_1284742_+	hypothetical protein	G9L6B3	Escherichia_phage	2.3e-91	92.7
WP_004151288.1\|1286192_1286648_+	hypothetical protein	K7P7B8	Enterobacteria_phage	8.0e-56	69.5
WP_023342724.1\|1286647_1286818_+	hypothetical protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
WP_014342900.1\|1286810_1287449_+	hypothetical protein	H6WRY9	Salmonella_phage	1.4e-74	69.3
WP_041937861.1\|1287445_1287625_+	hypothetical protein	NA	NA	NA	NA
WP_014342901.1\|1287621_1287744_+	hypothetical protein	NA	NA	NA	NA
WP_041937860.1\|1287740_1288520_+	antitermination protein	Q76H66	Enterobacteria_phage	6.3e-101	76.7
WP_004151282.1\|1289464_1289713_+	hypothetical protein	NA	NA	NA	NA
WP_014342902.1\|1289715_1290246_+	lysozyme	A0A1I9LJR4	Stx_converting_phage	9.3e-80	79.7
WP_014342903.1\|1290242_1290632_+	DUF2570 domain-containing protein	U5P0U9	Shigella_phage	1.1e-21	47.9
WP_014342905.1\|1291090_1291726_+	hypothetical protein	I6S676	Salmonella_phage	9.4e-103	81.6
WP_060613562.1\|1291756_1292242_+	DUF2280 domain-containing protein	H9C190	Pectobacterium_phage	2.2e-67	79.5
WP_014342907.1\|1292243_1293920_+\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	2.3e-249	74.4
WP_014342908.1\|1293920_1295441_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.2e-105	44.8
WP_014342909.1\|1295493_1296183_+\|capsid	minor capsid protein	H9C0V1	Aeromonas_phage	6.7e-62	52.2
WP_137440870.1\|1296246_1296615_+	hypothetical protein	NA	NA	NA	NA
WP_014342911.1\|1296622_1297630_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	1.6e-56	51.2
WP_000608644.1\|1297809_1299072_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_012579081.1\|1299303_1300227_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
WP_014342913.1\|1300793_1301276_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	1.2e-33	51.0
WP_004196839.1\|1301275_1302313_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	1.1e-84	50.3
WP_014342914.1\|1302314_1302641_+	hypothetical protein	H9C0V9	Aeromonas_phage	2.1e-10	42.5
WP_065799716.1\|1302640_1303084_+	DUF4054 domain-containing protein	A0A1X9SF97	Acinetobacter_phage	2.5e-14	40.5
WP_014342915.1\|1303086_1303650_+	hypothetical protein	H9C0W2	Aeromonas_phage	2.4e-17	32.4
WP_060613554.1\|1303646_1304015_+	hypothetical protein	Q6UJ26	Burkholderia_virus	1.6e-06	29.8
WP_014342917.1\|1303996_1304548_+	hypothetical protein	NA	NA	NA	NA
WP_014342918.1\|1304551_1306033_+	DUF3383 domain-containing protein	Q2NPD0	Xanthomonas_phage	9.3e-61	35.0
WP_014342919.1\|1306032_1306476_+	hypothetical protein	NA	NA	NA	NA
WP_014342920.1\|1306656_1307214_+	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	1.2e-88	89.3
WP_001518122.1\|1307293_1307770_+	hypothetical protein	A0A068CGG2	Acinetobacter_phage	5.5e-07	29.8
WP_014342922.1\|1307971_1309897_+	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	1.7e-38	53.2
WP_014342923.1\|1309900_1310743_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	1.3e-27	32.1
WP_032425989.1\|1310744_1311050_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	2.4e-19	45.5
WP_032425987.1\|1311046_1311901_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	2.4e-29	29.8
WP_040155013.1\|1311902_1312490_+	hypothetical protein	A0A1I9SEV6	Klebsiella_phage	1.5e-06	25.9
WP_100222754.1\|1312492_1312843_+	hypothetical protein	NA	NA	NA	NA
WP_153255413.1\|1312842_1313118_+	hypothetical protein	NA	NA	NA	NA
WP_032425981.1\|1313096_1313459_-	Arc family DNA-binding protein	H6WRU6	Salmonella_phage	1.5e-12	53.5
WP_014342925.1\|1313574_1313751_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_101987940.1\|1313821_1314796_+	hypothetical protein	A5VW58	Enterobacteria_phage	2.8e-98	84.5
WP_001518114.1\|1314863_1315220_+	hypothetical protein	NA	NA	NA	NA
WP_014342927.1\|1315227_1316460_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	3.9e-105	50.7
WP_014342928.1\|1316452_1317040_+	DUF2612 domain-containing protein	A0A077K9U8	Edwardsiella_phage	1.0e-34	43.9
1322850:1322896	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1762522 : 1836538

Salmonella_phage(56.82%)

protease,plate,integrase,tail,tRNA,capsid,portal,terminase,lysis,head

attL 1762430:1762448|attR 1792730:1792748

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1762430:1762448	attL	NA	NA	NA	NA
WP_004151720.1\|1762522_1763575_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
WP_004152765.1\|1763993_1765478_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_001154434.1\|1765578_1765767_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|1765777_1766011_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000700647.1\|1766125_1766803_+	hypothetical protein	NA	NA	NA	NA
WP_004199124.1\|1767078_1768821_+	AIPR family protein	NA	NA	NA	NA
WP_002895959.1\|1768882_1769908_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004150858.1\|1769907_1771674_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895967.1\|1771816_1772650_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_002895972.1\|1772666_1773725_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_000059191.1\|1773728_1774379_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002896151.1\|1774474_1774939_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_002896155.1\|1774938_1775142_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896158.1\|1775145_1775361_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896161.1\|1775341_1775851_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896163.1\|1775855_1776239_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896168.1\|1776235_1776664_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896172.1\|1776759_1777191_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896175.1\|1777183_1777630_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_004150857.1\|1777626_1778319_-	hypothetical protein	NA	NA	NA	NA
WP_002896177.1\|1778413_1778986_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_002896179.1\|1778982_1779345_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
WP_002896182.1\|1779331_1780240_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_004150856.1\|1780232_1780832_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_004152882.1\|1780833_1783785_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
WP_002896186.1\|1783788_1784520_+	hypothetical protein	NA	NA	NA	NA
WP_002896188.1\|1784516_1784720_+	hypothetical protein	NA	NA	NA	NA
WP_002896191.1\|1784749_1785826_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896193.1\|1785964_1787137_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896201.1\|1787146_1787662_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896204.1\|1787714_1788014_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896220.1\|1788028_1788148_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_002896224.1\|1790765_1791251_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896225.1\|1791247_1792348_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_135406301.1\|1792439_1792658_+	transcriptional regulator	Q53ZE7	Salmonella_virus	5.8e-20	69.0
WP_002896351.1\|1794828_1795212_+	membrane protein	NA	NA	NA	NA
1792730:1792748	attR	NA	NA	NA	NA
WP_002896352.1\|1795218_1795482_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
WP_002896354.1\|1795684_1795972_+	YbjC family protein	NA	NA	NA	NA
WP_002896363.1\|1796793_1797696_+	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
WP_002896365.1\|1797784_1798264_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_002896368.1\|1798612_1799725_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_002896370.1\|1799888_1801022_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	2.2e-30	34.9
WP_002896371.1\|1801032_1801986_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_002896372.1\|1801982_1802828_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_002896376.1\|1802885_1803374_+	DUF2593 family protein	NA	NA	NA	NA
WP_002896378.1\|1803415_1804543_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
WP_002896380.1\|1804621_1805338_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-34	36.9
WP_002896382.1\|1805334_1806807_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
WP_002896384.1\|1806849_1807581_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004150852.1\|1807764_1808433_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_002896386.1\|1808432_1809149_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_002896390.1\|1809155_1809887_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896392.1\|1809907_1810636_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
WP_002896394.1\|1810862_1811378_-	lipoprotein	NA	NA	NA	NA
WP_004150851.1\|1812255_1813395_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_002896397.1\|1813426_1814257_+	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
WP_002896399.1\|1814253_1815267_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_002896401.1\|1815354_1816797_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_002896404.1\|1816807_1817809_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_002896406.1\|1817847_1819566_-	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_002896408.1\|1819717_1820152_+	DoxX family protein	NA	NA	NA	NA
WP_002896410.1\|1820363_1821332_-	NADH oxidoreductase	NA	NA	NA	NA
WP_002896412.1\|1821342_1822995_-	hydroxylamine reductase	NA	NA	NA	NA
WP_004147773.1\|1823138_1824038_-	lysine exporter LysO family protein	NA	NA	NA	NA
WP_002896434.1\|1824153_1824849_-	aquaporin Z	NA	NA	NA	NA
WP_002896440.1\|1827074_1828190_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|1828186_1830127_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|1830203_1830425_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|1830750_1831068_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|1831098_1833378_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|1833498_1833717_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|1834070_1834772_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004150847.1\|1834816_1836538_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_5

2261601 : 2302530

uncultured_Caudovirales_phage(32.0%)

terminase,transposase,integrase

attL 2259682:2259696|attR 2268622:2268636

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2259682:2259696	attL	NA	NA	NA	NA
WP_004152144.1\|2261601_2262363_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
WP_004152145.1\|2262579_2264112_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_016197745.1\|2264310_2264859_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_004152147.1\|2265055_2266237_+\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_004152148.1\|2266217_2266460_-	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004152149.1\|2266638_2267118_-	hypothetical protein	NA	NA	NA	NA
WP_004152150.1\|2267114_2267327_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
WP_004152151.1\|2267323_2267548_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004154298.1\|2267537_2268248_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152153.1\|2268253_2268772_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
2268622:2268636	attR	NA	NA	NA	NA
WP_004152154.1\|2268876_2269704_-	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152155.1\|2269700_2269895_-	hypothetical protein	NA	NA	NA	NA
WP_004152156.1\|2269891_2270317_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004177208.1\|2270313_2270532_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
WP_004152157.1\|2270503_2270758_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004152158.1\|2270750_2271116_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
WP_004152159.1\|2271285_2271474_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152160.1\|2271466_2271781_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152161.1\|2271951_2272620_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152162.1\|2272717_2272939_+	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004198228.1\|2273516_2275175_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004198233.1\|2275176_2276139_+	zinc-binding domain of primase-helicase family protein	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198239.1\|2276135_2276612_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004152167.1\|2276608_2277391_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_014343019.1\|2277796_2278000_+	hypothetical protein	NA	NA	NA	NA
WP_004201219.1\|2278010_2279549_-\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.1e-280	94.3
WP_000612626.1\|2279597_2279945_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_003031976.1\|2279941_2280346_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.3e-69	98.5
WP_004152169.1\|2280509_2281040_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004153952.1\|2281036_2281426_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152170.1\|2281660_2281981_+	hypothetical protein	NA	NA	NA	NA
WP_004152171.1\|2282082_2282835_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
WP_004152172.1\|2282785_2284186_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004152173.1\|2284423_2285875_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152174.1\|2285930_2286479_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004199270.1\|2286530_2287733_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_000528476.1\|2287736_2288231_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_014343020.1\|2288242_2289184_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	3.9e-137	77.1
WP_000725700.1\|2289223_2289505_+	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|2289473_2289893_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000834982.1\|2289889_2290396_+	hypothetical protein	NA	NA	NA	NA
WP_001116156.1\|2290395_2290782_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_004152176.1\|2290876_2291317_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_004152177.1\|2291320_2292466_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004199809.1\|2292476_2292917_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
WP_004152564.1\|2292920_2293346_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004152565.1\|2293381_2293534_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152566.1\|2293523_2295527_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004152567.1\|2295526_2296126_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004152568.1\|2296126_2296429_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
WP_004152569.1\|2296431_2297454_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004152570.1\|2297453_2297795_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004199301.1\|2297844_2298027_+	hypothetical protein	NA	NA	NA	NA
WP_004152571.1\|2298069_2298636_+	hypothetical protein	NA	NA	NA	NA
WP_004152572.1\|2298689_2299343_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152573.1\|2299344_2299698_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152574.1\|2299697_2300894_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152575.1\|2300890_2301664_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004152576.1\|2301663_2302530_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5

DBSCAN-SWA_6

2529700 : 2536130

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|2529700_2530321_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_004151609.1\|2530313_2531579_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_004151610.1\|2531590_2532493_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_002210513.1\|2532753_2533515_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|2533535_2534396_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_001620097.1\|2535041_2536130_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0

DBSCAN-SWA_7

3208121 : 3275724

Microcystis_phage(22.22%)

protease,tRNA,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002910404.1\|3208121_3209378_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_002910405.1\|3209648_3210260_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_004891134.1\|3210256_3211108_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_014343189.1\|3211291_3212239_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	6.6e-44	37.2
WP_004200291.1\|3212363_3214043_+	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	1.0e-23	23.4
WP_004175547.1\|3214043_3215090_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002910437.1\|3215311_3215587_-	stress-induced protein YchH	NA	NA	NA	NA
WP_004180389.1\|3215859_3216444_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_002910443.1\|3216561_3217653_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_004145442.1\|3217736_3218066_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_002910453.1\|3218149_3219064_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004200294.1\|3219195_3220611_-	membrane protein	NA	NA	NA	NA
WP_004152261.1\|3220630_3221074_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004189400.1\|3221076_3221619_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_032440110.1\|3221593_3222640_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_014343191.1\|3222639_3224403_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_014343192.1\|3224536_3227947_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_014343193.1\|3227930_3229088_-	hypothetical protein	NA	NA	NA	NA
WP_004175522.1\|3229091_3229358_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_014343194.1\|3229655_3229898_-	hypothetical protein	NA	NA	NA	NA
WP_012579081.1\|3232224_3233148_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
WP_137440875.1\|3233269_3233602_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_014343201.1\|3233777_3234671_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.7e-12	27.3
WP_014343203.1\|3234854_3235748_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	8.8e-14	28.8
WP_015958629.1\|3235769_3236075_-	hypothetical protein	NA	NA	NA	NA
WP_040216891.1\|3237303_3237495_-	hypothetical protein	NA	NA	NA	NA
WP_023158128.1\|3237491_3238001_-	hypothetical protein	NA	NA	NA	NA
WP_040200757.1\|3238084_3238591_-	hypothetical protein	NA	NA	NA	NA
WP_071557516.1\|3238685_3239042_-	hypothetical protein	NA	NA	NA	NA
WP_002910593.1\|3239278_3239788_-	hypothetical protein	NA	NA	NA	NA
WP_014343209.1\|3239788_3241144_-	hypothetical protein	NA	NA	NA	NA
WP_014343210.1\|3241167_3243654_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_014343211.1\|3244113_3245811_-	OmpA family protein	NA	NA	NA	NA
WP_004189358.1\|3245814_3246468_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_014343212.1\|3246464_3247805_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_077258549.1\|3248042_3248288_-	hypothetical protein	NA	NA	NA	NA
WP_002910650.1\|3248374_3248704_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_004899028.1\|3248773_3249358_+	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_014907357.1\|3249383_3250082_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_002910657.1\|3250272_3250755_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004152315.1\|3250864_3251764_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004175495.1\|3251738_3252545_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_002910715.1\|3254160_3255087_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910717.1\|3255185_3255662_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004148802.1\|3255711_3257355_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
WP_004145473.1\|3257638_3258532_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014343216.1\|3258537_3259257_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-11	26.0
WP_004148803.1\|3259253_3260129_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	9.5e-05	41.5
WP_014343219.1\|3261420_3262335_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_009484368.1\|3262444_3263560_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004175486.1\|3266311_3267520_-	propionate kinase	NA	NA	NA	NA
WP_004200322.1\|3267547_3268879_-	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_002910762.1\|3268904_3269894_-	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_002910764.1\|3269987_3270929_-	transcriptional regulator TdcA	NA	NA	NA	NA
WP_004145488.1\|3271545_3271668_+	nitrilotriacetate monooxygenase	NA	NA	NA	NA
WP_014343224.1\|3271705_3272506_-	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_023158138.1\|3272498_3273512_-	fatty acid desaturase	NA	NA	NA	NA
WP_014343226.1\|3273640_3274498_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_004175481.1\|3274977_3275724_-\|protease	proteasome-type protease	NA	NA	NA	NA

DBSCAN-SWA_8

3537272 : 3545649

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175262.1\|3537272_3538277_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.8e-31	29.5
WP_004144151.1\|3538677_3538800_+	small membrane protein	NA	NA	NA	NA
WP_004175261.1\|3539222_3540389_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_004175260.1\|3540568_3541123_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_004175259.1\|3541137_3542028_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
WP_004175258.1\|3542059_3542929_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_014343304.1\|3542955_3544020_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-105	55.0
WP_014343305.1\|3544242_3545649_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

DBSCAN-SWA_9

3588976 : 3595882

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004149058.1\|3588976_3590455_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3
WP_004175198.1\|3590451_3591174_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004144192.1\|3591492_3592854_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_002912636.1\|3593100_3593994_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004180550.1\|3594234_3595008_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004175147.1\|3595018_3595882_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_10

4001030 : 4075936

Escherichia_phage(31.91%)

plate,transposase,integrase,tail,tRNA,holin,capsid,portal,terminase,lysis,head

attL 4024386:4024401|attR 4043716:4043731

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002914079.1\|4001030_4001768_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_002914082.1\|4001899_4003231_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
WP_002914084.1\|4003276_4003660_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
WP_002914088.1\|4003973_4004663_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
WP_002914089.1\|4004720_4005806_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_002914091.1\|4006009_4006435_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
WP_002914092.1\|4006504_4007203_+	DTW domain-containing protein	NA	NA	NA	NA
WP_004188841.1\|4007237_4009889_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914094.1\|4010009_4011365_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_002914095.1\|4011406_4011730_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914097.1\|4011733_4013032_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_004150973.1\|4018995_4021569_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914109.1\|4021698_4022430_-	polyphenol oxidase	NA	NA	NA	NA
WP_002914110.1\|4022426_4023407_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_004145664.1\|4023538_4024276_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
4024386:4024401	attL	NA	NA	NA	NA
WP_002914111.1\|4024546_4024882_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100250063.1\|4024988_4025036_+	hypothetical protein	NA	NA	NA	NA
WP_004150975.1\|4025136_4026297_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_002914112.1\|4026293_4027166_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_002914113.1\|4027228_4028350_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914114.1\|4028359_4029430_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_004174804.1\|4029772_4030282_+	YfiR family protein	NA	NA	NA	NA
WP_002914116.1\|4030274_4031498_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_002914117.1\|4031511_4031994_+	OmpA family protein	NA	NA	NA	NA
WP_002914118.1\|4032002_4033373_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914119.1\|4033429_4033888_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_014343376.1\|4034119_4035151_-\|integrase	site-specific integrase	A0A0M4S6G4	Salmonella_phage	1.6e-173	83.7
WP_101987948.1\|4035153_4036026_-	phage repressor protein CI	Q6K1G0	Salmonella_virus	2.1e-68	44.8
WP_023317540.1\|4036151_4036379_+	hypothetical protein	NA	NA	NA	NA
WP_014343379.1\|4036410_4036920_+	phage regulatory CII family protein	Q6K1F8	Salmonella_virus	4.1e-85	94.1
WP_040165606.1\|4036927_4037128_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	9.3e-17	71.0
WP_014343381.1\|4037208_4037496_+	hypothetical protein	F1BUS4	Erwinia_phage	2.3e-24	55.9
WP_014343382.1\|4037561_4037786_+	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	4.4e-15	71.9
WP_014343383.1\|4037785_4038013_+	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	1.8e-24	76.4
WP_014343384.1\|4038009_4038591_+	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	2.6e-83	77.7
WP_014343385.1\|4038587_4038860_+	DUF5405 family protein	A0A218M4I8	Erwinia_phage	1.1e-31	73.3
WP_042945817.1\|4038856_4039138_+	DUF3850 domain-containing protein	A0A0P0I3U9	Klebsiella_phage	1.3e-11	50.0
WP_101987949.1\|4039128_4041345_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	90.6
WP_004152765.1\|4041490_4042975_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_014343387.1\|4043381_4043564_+	hypothetical protein	A0A0M5M1G5	Salmonella_phage	5.3e-19	78.3
WP_064172876.1\|4043567_4043798_+	DinI-like family protein	A0A218M4I0	Erwinia_phage	4.8e-25	69.7
4043716:4043731	attR	NA	NA	NA	NA
WP_014343389.1\|4043877_4044609_+	hypothetical protein	Q37850	Escherichia_phage	2.4e-118	85.6
WP_014343390.1\|4044722_4045520_+	hypothetical protein	NA	NA	NA	NA
WP_014343391.1\|4045890_4046934_-\|portal	phage portal protein	M1SV64	Escherichia_phage	2.6e-166	82.1
WP_014343392.1\|4046933_4048703_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	2.4e-305	87.8
WP_014343393.1\|4048868_4049723_+\|capsid	GPO family capsid scaffolding protein	Q94MB7	Escherichia_virus	4.8e-126	81.0
WP_101987951.1\|4050857_4051601_+\|terminase	terminase endonuclease subunit	Q94MJ2	Enterobacteria_phage	6.7e-100	80.3
WP_014343397.1\|4051697_4052204_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	5.4e-61	84.3
WP_014343398.1\|4052203_4052407_+\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.6e-24	79.1
WP_004195910.1\|4052411_4052702_+\|holin	holin	O80308	Escherichia_phage	5.3e-37	85.7
WP_014343399.1\|4052688_4053186_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.0e-80	87.7
WP_014343400.1\|4053182_4053614_+\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	3.7e-42	66.9
WP_014343402.1\|4053709_4054177_+\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	6.3e-64	74.8
WP_085841837.1\|4054169_4054619_+	phage virion morphogenesis protein	O80313	Escherichia_phage	1.9e-49	68.0
WP_085841838.1\|4054687_4055329_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	3.4e-92	77.5
WP_014343405.1\|4055325_4055673_+\|plate	baseplate assembly protein	Q7Y4D7	Escherichia_virus	4.9e-45	77.4
WP_014343406.1\|4055677_4056586_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	1.9e-112	70.5
WP_101987952.1\|4056578_4057178_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	4.9e-53	57.0
WP_137440876.1\|4057831_4061410_+	hypothetical protein	NA	NA	NA	NA
WP_014343410.1\|4061425_4062496_+\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	8.9e-29	40.8
WP_014343411.1\|4062606_4063788_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	2.1e-196	86.9
WP_014343412.1\|4063801_4064317_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	3.2e-69	75.6
WP_004195711.1\|4064377_4064653_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.4e-31	77.3
WP_014343413.1\|4064685_4064805_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.0e-14	92.3
WP_014343414.1\|4064797_4067239_+\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	1.1e-289	72.1
WP_101987954.1\|4067252_4067732_+\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	9.3e-71	82.2
WP_014343416.1\|4067731_4068892_+	phage late control D family protein	Q7Y4C6	Escherichia_virus	9.8e-175	81.2
WP_071839001.1\|4068972_4069191_+	DNA-binding transcriptional regulator	Q37973	Salmonella_virus	7.8e-33	84.7
WP_002914145.1\|4069350_4069698_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914147.1\|4069737_4070505_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_004150977.1\|4070536_4071085_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914149.1\|4071103_4071352_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002914152.1\|4071611_4072976_-	signal recognition particle protein	NA	NA	NA	NA
WP_002914153.1\|4073139_4073931_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_000608644.1\|4074673_4075936_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0

DBSCAN-SWA_11

4767524 : 4816367

uncultured_Caudovirales_phage(66.67%)

protease,tail,tRNA,capsid,portal,terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002918465.1\|4767524_4768019_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
WP_002918467.1\|4768022_4768661_-	stringent starvation protein A	NA	NA	NA	NA
WP_135801240.1\|4768630_4768915_-	hypothetical protein	NA	NA	NA	NA
WP_000829818.1\|4768972_4769365_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002918559.1\|4769380_4769809_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004144945.1\|4770074_4771202_-	cell division protein ZapE	NA	NA	NA	NA
WP_002918565.1\|4771392_4771791_+	DUF1043 family protein	NA	NA	NA	NA
WP_002918566.1\|4771964_4773332_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918568.1\|4773419_4774478_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_002918570.1\|4774614_4775553_-	malate dehydrogenase	NA	NA	NA	NA
WP_002918625.1\|4775967_4776438_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918626.1\|4776813_4777077_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918627.1\|4777175_4777442_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918629.1\|4777492_4777768_-	hypothetical protein	NA	NA	NA	NA
WP_002918632.1\|4777847_4779815_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918639.1\|4779820_4780753_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918640.1\|4780760_4780964_-	AaeX family protein	NA	NA	NA	NA
WP_002918641.1\|4781095_4782025_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_002918642.1\|4782060_4783506_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_004150952.1\|4783594_4787392_-	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_002918644.1\|4787429_4788899_-	ribonuclease G	NA	NA	NA	NA
WP_002918646.1\|4788901_4789483_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918648.1\|4789490_4789979_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004149974.1\|4789978_4790971_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918653.1\|4791041_4792085_-	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_002918686.1\|4792390_4794331_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002918687.1\|4794410_4794602_-	hypothetical protein	NA	NA	NA	NA
WP_002918688.1\|4794830_4795832_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_002918689.1\|4795831_4796440_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_002918732.1\|4796663_4797116_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918736.1\|4797138_4797606_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002918738.1\|4797616_4798966_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918740.1\|4799076_4799319_+	YhdT family protein	NA	NA	NA	NA
WP_002918742.1\|4799308_4800760_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_002918745.1\|4800771_4801653_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_004144972.1\|4802010_4802976_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|4803000_4803297_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_004150954.1\|4803450_4803642_-	hypothetical protein	NA	NA	NA	NA
WP_004150955.1\|4803644_4805306_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
WP_000113647.1\|4805289_4805646_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150959.1\|4805921_4806365_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_001547824.1\|4806364_4806664_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150961.1\|4806660_4806996_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_004150962.1\|4806992_4808234_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_001547826.1\|4808235_4808796_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_001549743.1\|4808847_4810014_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_004150963.1\|4810277_4810790_+	hypothetical protein	NA	NA	NA	NA
WP_004150964.1\|4810838_4811174_-	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|4811516_4813652_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_001549749.1\|4813651_4814017_-	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|4814013_4814382_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_004150967.1\|4814378_4814693_-	hypothetical protein	NA	NA	NA	NA
WP_001549752.1\|4814685_4814874_-	hypothetical protein	NA	NA	NA	NA
WP_106918304.1\|4814866_4815136_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_004150969.1\|4815587_4816367_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP037927

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection