CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP053225	Sphingobium sp. RSMS plasmid pRSMS2, complete sequence	0 crisprs	NA	2
NZ_CP053222	Sphingobium sp. RSMS chromosome 1, complete sequence	0 crisprs	csa3,WYL,DEDDh,cas3,DinG	6
NZ_CP053226	Sphingobium sp. RSMS plasmid pRSMS3, complete sequence	0 crisprs	RT	0
NZ_CP053224	Sphingobium sp. RSMS plasmid pRSMS1, complete sequence	0 crisprs	WYL	0
NZ_CP053227	Sphingobium sp. RSMS plasmid pRSMS4	0 crisprs	NA	0
NZ_CP053223	Sphingobium sp. RSMS chromosome 2, complete sequence	0 crisprs	NA	2

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

940727 : 949247

Burkholderia_phage(16.67%)

transposase,integrase

attL 939147:939161|attR 945115:945129

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
939147:939161	attL	NA	NA	NA	NA
WP_137708768.1\|940727_940925_+	AlpA family phage regulatory protein	E5E3Y1	Burkholderia_phage	8.6e-07	48.2
WP_137708767.1\|940909_942196_-\|integrase	integrase arm-type DNA-binding domain-containing protein	C6ZR22	Salmonella_phage	5.1e-63	36.9
WP_081856576.1\|942689_943517_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	9.2e-42	39.4
WP_137708766.1\|943513_945013_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	4.1e-16	30.0
WP_025548049.1\|945591_946665_+	aromatic ring-hydroxylating dioxygenase subunit alpha	A0A076FFT9	Aureococcus_anophage	1.2e-12	31.9
945115:945129	attR	NA	NA	NA	NA
WP_137708765.1\|946746_947763_-	fatty acid desaturase family protein	NA	NA	NA	NA
WP_044661072.1\|947984_949247_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.8e-25	26.0

DBSCAN-SWA_2

1037325 : 1058898

Pseudomonas_phage(25.0%)

head,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_137708744.1\|1037325_1038486_-	recombinase RecT	C5IHJ8	Burkholderia_virus	1.9e-37	38.8
WP_025772726.1\|1038504_1038747_-	hypothetical protein	A0A1P8VVL0	Erythrobacter_phage	4.9e-12	51.9
WP_137708743.1\|1038759_1039518_-	hypothetical protein	NA	NA	NA	NA
WP_137708742.1\|1039528_1039912_-	hypothetical protein	NA	NA	NA	NA
WP_171009929.1\|1039908_1040268_-	hypothetical protein	NA	NA	NA	NA
WP_137708740.1\|1040267_1040483_-	hypothetical protein	NA	NA	NA	NA
WP_137708739.1\|1040577_1040985_-	hypothetical protein	NA	NA	NA	NA
WP_137708738.1\|1040988_1041252_-	hypothetical protein	NA	NA	NA	NA
WP_171009928.1\|1041253_1041943_-	hypothetical protein	X4YTE2	Pseudomonas_phage	7.7e-10	30.2
WP_137708736.1\|1042017_1042236_+	hypothetical protein	NA	NA	NA	NA
WP_137708735.1\|1042483_1042936_+	hypothetical protein	NA	NA	NA	NA
WP_137708734.1\|1043068_1043662_+	DUF2312 domain-containing protein	A0A0F6R615	Sinorhizobium_phage	1.6e-16	58.0
WP_137709090.1\|1043679_1044609_+	ATP-binding protein	A0A2K9L1J2	Tupanvirus	2.2e-15	32.9
WP_137708733.1\|1044765_1045002_+	hypothetical protein	A0A0P0IKM2	Acinetobacter_phage	5.3e-11	63.6
WP_137708732.1\|1045057_1045411_+	hypothetical protein	NA	NA	NA	NA
WP_137708731.1\|1045403_1046363_+	DUF1376 domain-containing protein	H2BD69	Pseudomonas_phage	7.9e-29	49.3
WP_025772737.1\|1046367_1046796_+	hypothetical protein	NA	NA	NA	NA
WP_137708729.1\|1047006_1047435_+	hypothetical protein	NA	NA	NA	NA
WP_137708728.1\|1047427_1048138_+\|terminase	terminase small subunit	A0A248SKT2	Klebsiella_phage	4.6e-50	50.2
WP_137708727.1\|1048124_1049621_+\|terminase	terminase	K4NWT7	Pseudomonas_phage	8.9e-120	50.9
WP_171009922.1\|1049736_1049883_+	hypothetical protein	NA	NA	NA	NA
WP_137709089.1\|1049924_1051529_+\|head,tail	head-tail connector protein	W6MYA0	Pseudomonas_phage	6.5e-76	33.9
WP_137708726.1\|1051525_1051840_+	hypothetical protein	NA	NA	NA	NA
WP_171009927.1\|1051865_1052621_+	hypothetical protein	A0A2I7QLA2	Vibrio_phage	3.8e-18	37.2
WP_137708723.1\|1052624_1053662_+	hypothetical protein	A0A2I7QL96	Vibrio_phage	9.0e-103	56.0
WP_137708722.1\|1053689_1054118_+	hypothetical protein	T1SA71	Salmonella_phage	2.1e-21	44.1
WP_137708721.1\|1054132_1054465_+	hypothetical protein	NA	NA	NA	NA
WP_137708720.1\|1054507_1055737_+	hypothetical protein	S4S2L2	Puniceispirillum_phage	9.3e-06	27.2
WP_137708719.1\|1055791_1056439_+	hypothetical protein	NA	NA	NA	NA
WP_137708718.1\|1056428_1057055_+	hypothetical protein	A0A193GZ54	Enterobacter_phage	1.2e-22	55.3
WP_137708717.1\|1057074_1058898_+	hypothetical protein	Q775D1	Bordetella_phage	1.9e-92	34.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP053225

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 13483

Vibrio_virus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017501683.1\|1052_1337_-	hypothetical protein	NA	NA	NA	NA
WP_017501684.1\|1336_1972_-	AAA family ATPase	A2I303	Vibrio_virus	1.1e-10	35.9
WP_017501687.1\|3140_3422_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_026109291.1\|3390_3711_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_017501689.1\|3713_4334_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_038292857.1\|4367_4913_-	recombinase family protein	K7PJT4	Enterobacteria_phage	7.4e-24	40.3
WP_171010093.1\|5620_6346_-	phospholipase A	NA	NA	NA	NA
WP_012112698.1\|6972_8328_+\|transposase	IS1380-like element ISPme1 family transposase	A0A1X9I6F6	Streptococcus_phage	3.8e-45	29.0
WP_137710492.1\|8566_10087_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_066278433.1\|10166_11201_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	1.5e-33	29.9
WP_137710496.1\|11233_13483_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.6e-80	36.2

DBSCAN-SWA_2

20738 : 29261

Streptococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012112698.1\|20738_22094_-\|transposase	IS1380-like element ISPme1 family transposase	A0A1X9I6F6	Streptococcus_phage	3.8e-45	29.0
WP_017501672.1\|23040_23325_-	WGR domain-containing protein	NA	NA	NA	NA
WP_156367391.1\|23821_23998_+	hypothetical protein	NA	NA	NA	NA
WP_017501674.1\|24004_25174_-	serpin family protein	U5TMV6	Cowpox_virus	9.7e-21	26.3
WP_010339208.1\|25308_25578_-	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_017501675.1\|25577_26315_-	hypothetical protein	NA	NA	NA	NA
WP_017501676.1\|26324_29261_-	Ti-type conjugative transfer relaxase TraA	V5UQN3	Mycobacterium_phage	1.3e-10	24.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP053222

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1234879 : 1297350

Klosneuvirus(16.67%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044662309.1\|1234879_1235338_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_044662310.1\|1235334_1236321_+	phosphotransferase	NA	NA	NA	NA
WP_025548951.1\|1236317_1237028_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_044662311.1\|1237020_1239996_+	double-strand break repair protein AddB	NA	NA	NA	NA
WP_044662312.1\|1239976_1243420_+	double-strand break repair helicase AddA	G3MA40	Bacillus_virus	6.2e-07	31.3
WP_044662313.1\|1243449_1243770_+	thioredoxin TrxA	A0A1J0GW78	Streptomyces_phage	3.1e-22	50.0
WP_044662314.1\|1243815_1244427_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_044662315.1\|1244444_1245242_-	inositol monophosphatase	NA	NA	NA	NA
WP_044662316.1\|1245258_1246485_-	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA
WP_044662317.1\|1246515_1248027_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_044662318.1\|1248265_1250995_+	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_044662319.1\|1251217_1251643_-	DUF983 domain-containing protein	NA	NA	NA	NA
WP_044662320.1\|1251981_1252182_-	hypothetical protein	NA	NA	NA	NA
WP_044662321.1\|1252586_1253624_+	lytic murein transglycosylase	NA	NA	NA	NA
WP_044662322.1\|1253704_1254868_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.5e-45	34.8
WP_044662323.1\|1254864_1255506_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.1e-29	42.9
WP_044662324.1\|1255502_1256465_+	AAA family ATPase	NA	NA	NA	NA
WP_044662325.1\|1256508_1258077_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	2.2e-92	36.5
WP_044662326.1\|1258080_1258854_+	TatD family hydrolase	NA	NA	NA	NA
WP_044662327.1\|1258850_1259630_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_044662328.1\|1259644_1260280_+\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA
WP_044662329.1\|1260276_1261572_+	MFS transporter	Q6JIH2	Burkholderia_virus	4.6e-48	32.8
WP_061934467.1\|1261712_1263131_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_061934287.1\|1263403_1264405_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_103001502.1\|1264573_1265992_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_044662330.1\|1266251_1267040_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_044662331.1\|1267097_1268429_-	GTPase HflX	NA	NA	NA	NA
WP_025548924.1\|1268494_1268977_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_044662332.1\|1269132_1270506_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_044662333.1\|1270495_1272760_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.3e-08	24.3
WP_044663153.1\|1272911_1274357_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA
WP_025548920.1\|1274370_1275480_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_044663154.1\|1275476_1276496_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_044662334.1\|1276602_1277784_+	bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_025548915.1\|1277789_1278308_+	CinA family protein	B5TK85	Pseudomonas_phage	4.0e-19	42.0
WP_025548914.1\|1278253_1278730_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_044662335.1\|1278734_1279718_-	lipoyl synthase	NA	NA	NA	NA
WP_044662336.1\|1279738_1280389_+	carbonic anhydrase	NA	NA	NA	NA
WP_044662337.1\|1280388_1281123_+	NYN domain-containing protein	NA	NA	NA	NA
WP_044662338.1\|1281122_1281404_+	acylphosphatase	NA	NA	NA	NA
WP_044662339.1\|1281579_1284234_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.2e-71	37.6
WP_044662340.1\|1284573_1285983_-	adenosylhomocysteinase	S4W1G4	Pandoravirus	4.0e-45	30.8
WP_044662341.1\|1286104_1286656_-	hypothetical protein	NA	NA	NA	NA
WP_025550882.1\|1286819_1287380_-	YqgE/AlgH family protein	NA	NA	NA	NA
WP_025550880.1\|1287526_1288009_+	peroxiredoxin	A0A1D8KSL1	Synechococcus_phage	1.9e-23	41.0
WP_044662342.1\|1288082_1289537_+	AMP nucleosidase	NA	NA	NA	NA
WP_044662343.1\|1289578_1290352_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_025550875.1\|1290359_1291040_-	DUF2238 domain-containing protein	NA	NA	NA	NA
WP_025550873.1\|1291050_1292076_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_044662344.1\|1292311_1294531_-	S9 family peptidase	NA	NA	NA	NA
WP_007685859.1\|1294858_1294987_+	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_025550870.1\|1295004_1295193_-	hypothetical protein	NA	NA	NA	NA
WP_099185983.1\|1295388_1295931_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_044662345.1\|1296048_1297350_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	1.1e-41	29.7

DBSCAN-SWA_2

1808570 : 1855117

uncultured_Mediterranean_phage(10.53%)

head,capsid,transposase,portal,tRNA,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044662575.1\|1808570_1809848_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.7e-96	46.5
WP_044662576.1\|1809882_1810656_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.7e-37	38.4
WP_044662577.1\|1810824_1811883_+	NAD-binding protein	NA	NA	NA	NA
WP_171010080.1\|1811919_1813302_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_044662578.1\|1813397_1814252_-	DUF4163 domain-containing protein	NA	NA	NA	NA
WP_007684028.1\|1814251_1814455_-	hypothetical protein	NA	NA	NA	NA
WP_044662579.1\|1814594_1815992_+	leucyl aminopeptidase family protein	Q6GYZ8	Mycoplasma_phage	1.7e-27	34.1
WP_025548865.1\|1816053_1816461_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_044662580.1\|1816420_1817329_+	C40 family peptidase	A0A1J0GW44	Streptomyces_phage	1.2e-07	41.1
WP_025548862.1\|1817325_1818270_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_037482318.1\|1818364_1818568_-	hypothetical protein	NA	NA	NA	NA
WP_165363299.1\|1818795_1818969_+	hypothetical protein	NA	NA	NA	NA
WP_044662581.1\|1819029_1820358_+	sorbosone dehydrogenase family protein	NA	NA	NA	NA
WP_025548859.1\|1820586_1821405_-	ATP-binding protein	NA	NA	NA	NA
WP_044663182.1\|1821516_1822473_+	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	6.0e-37	37.2
WP_025548857.1\|1822570_1822837_-	hypothetical protein	NA	NA	NA	NA
WP_025548856.1\|1822911_1823448_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_044662582.1\|1823491_1825198_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	4.0e-23	22.9
WP_025548854.1\|1825335_1826019_-	DUF1013 domain-containing protein	NA	NA	NA	NA
WP_044662583.1\|1826145_1827174_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_025548852.1\|1827188_1828052_-	UDP-2,3-diacylglucosamine diphosphatase	A0A218MKA7	uncultured_virus	2.3e-64	47.7
WP_044663183.1\|1828385_1829402_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_044662584.1\|1829499_1829697_+	DUF1192 domain-containing protein	NA	NA	NA	NA
WP_044662585.1\|1829854_1832173_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.1e-176	43.8
WP_044662586.1\|1832389_1833019_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_025548846.1\|1833089_1833827_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_044662587.1\|1833947_1834496_+	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA
WP_044662588.1\|1834527_1835076_-	superoxide dismutase family protein	Q80LJ0	Adoxophyes_honmai_nucleopolyhedrovirus	1.3e-07	34.5
WP_044662589.1\|1835439_1836516_-	OmpA family protein	NA	NA	NA	NA
WP_044662590.1\|1836706_1837210_-	DUF2793 domain-containing protein	NA	NA	NA	NA
WP_137710349.1\|1837243_1839439_-	hypothetical protein	A0A1W6DWX7	Sphingobium_phage	7.4e-30	42.2
WP_013039658.1\|1839447_1839807_-	hypothetical protein	NA	NA	NA	NA
WP_044662592.1\|1839815_1840634_-	DUF2163 domain-containing protein	Q5DN21	Alphaproteobacteria_virus	5.4e-10	40.2
WP_044662593.1\|1840630_1842958_-	DUF2460 domain-containing protein	A0A1V0DYB0	Dinoroseobacter_phage	1.1e-26	40.9
WP_044662594.1\|1842954_1843497_-	hypothetical protein	D6PEW0	uncultured_phage	9.7e-08	33.3
WP_044662595.1\|1843579_1843777_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_076605723.1\|1843773_1844049_-	gene transfer agent family protein	NA	NA	NA	NA
WP_025552304.1\|1844096_1844504_-\|tail	phage tail protein	NA	NA	NA	NA
WP_025552306.1\|1844562_1844892_+	hypothetical protein	NA	NA	NA	NA
WP_044662596.1\|1844888_1845284_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_044662597.1\|1845280_1845484_-	hypothetical protein	NA	NA	NA	NA
WP_044662598.1\|1845503_1845989_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_044662599.1\|1846113_1847226_-\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	9.7e-79	43.9
WP_044662600.1\|1847354_1847747_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.6e-15	42.1
WP_025552246.1\|1847739_1848060_-	hypothetical protein	K4I011	Acidithiobacillus_phage	9.7e-08	41.4
WP_044662601.1\|1848083_1849214_-\|portal	phage portal protein	W8ECU7	Geobacillus_phage	3.1e-48	33.6
WP_044662602.1\|1849328_1849667_-	hypothetical protein	NA	NA	NA	NA
WP_025552161.1\|1849828_1851154_-	DNA-packaging protein	A0A1V0DY66	Dinoroseobacter_phage	2.8e-72	42.2
WP_170825668.1\|1851228_1851666_+	acetyltransferase	NA	NA	NA	NA
WP_083199221.1\|1851755_1852865_-	diguanylate cyclase	NA	NA	NA	NA
WP_139111520.1\|1852902_1853790_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_044660505.1\|1853893_1855117_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.4e-41	44.0

DBSCAN-SWA_3

2258299 : 2263975

uncultured_Mediterranean_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044662761.1\|2258299_2259295_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	6.9e-52	41.0
WP_044662762.1\|2259469_2260438_+	cell wall hydrolase	A0A1B0UXM4	Roseobacter_phage	3.2e-17	39.7
WP_025546951.1\|2260826_2260955_+	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_025546953.1\|2260991_2261777_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	2.0e-46	42.6
WP_044660142.1\|2261773_2262211_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_007685564.1\|2262241_2262472_-	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	5.0e-06	75.0
WP_025546958.1\|2262602_2263196_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.4e-39	44.1
WP_044660143.1\|2263192_2263975_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.3e-29	32.0

DBSCAN-SWA_4

2415161 : 2421641

uncultured_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025548310.1\|2415161_2415476_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	5.8e-21	58.7
WP_025548312.1\|2415531_2417151_+	chaperonin GroEL	A0A240F779	uncultured_virus	1.2e-175	59.3
WP_137710316.1\|2417285_2418134_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.6e-35	33.8
WP_037484504.1\|2418082_2418430_-\|transposase	transposase	NA	NA	NA	NA
WP_099185604.1\|2418651_2419380_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	8.1e-34	38.6
WP_099185852.1\|2419521_2420382_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	2.6e-55	47.0
WP_099185853.1\|2420378_2421641_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.0e-40	36.5

DBSCAN-SWA_5

2822421 : 2882416

Burkholderia_phage(16.13%)

integrase,head,capsid,transposase,portal,terminase,tRNA,tail,plate

attL 2842357:2842376|attR 2883919:2883938

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048577224.1\|2822421_2823336_-\|tRNA	methionyl-tRNA formyltransferase	NA	NA	NA	NA
WP_137710149.1\|2823298_2823895_-	sugar transferase	NA	NA	NA	NA
WP_137710148.1\|2823891_2825076_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_025550782.1\|2825478_2827617_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.8e-17	27.1
WP_137710147.1\|2827632_2828889_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L0G1	Tupanvirus	5.8e-72	38.6
WP_137710146.1\|2828885_2829728_+	sulfotransferase	NA	NA	NA	NA
WP_025550778.1\|2829900_2830476_+	polysaccharide export protein	NA	NA	NA	NA
WP_137710145.1\|2830475_2831714_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_048577220.1\|2831848_2832985_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_137710144.1\|2832981_2833845_+	sulfotransferase domain-containing protein	NA	NA	NA	NA
WP_137710143.1\|2833846_2834983_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_137710142.1\|2834973_2835690_+	metallophosphoesterase	NA	NA	NA	NA
WP_137710141.1\|2835686_2836670_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_137710140.1\|2836666_2837545_+	NAD(P)-dependent oxidoreductase	A0A0P0YMS6	Yellowstone_lake_phycodnavirus	6.6e-06	23.3
WP_037481813.1\|2837735_2838305_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_044662835.1\|2838393_2838909_+	ubiquinol-cytochrome c chaperone	NA	NA	NA	NA
WP_137710139.1\|2838905_2839430_+	DUF177 domain-containing protein	NA	NA	NA	NA
WP_048578234.1\|2839426_2839966_+	hypothetical protein	NA	NA	NA	NA
WP_025547895.1\|2840018_2841098_+	DNA polymerase IV	NA	NA	NA	NA
WP_137710138.1\|2841235_2842048_-	DUF1134 domain-containing protein	NA	NA	NA	NA
2842357:2842376	attL	NA	NA	NA	NA
WP_137710137.1\|2842523_2843870_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q8W6M6	Sinorhizobium_phage	2.8e-96	46.4
WP_137710136.1\|2843872_2844205_-	AlpA family phage regulatory protein	Q7M299	Enterobacteria_phage	1.1e-06	45.8
WP_137710135.1\|2844158_2844401_-	DUF2312 domain-containing protein	A0A076YL00	Rhizobium_phage	2.3e-17	62.0
WP_137710134.1\|2844412_2844592_-	hypothetical protein	NA	NA	NA	NA
WP_137710133.1\|2844591_2845035_-	hypothetical protein	NA	NA	NA	NA
WP_171010061.1\|2845052_2847773_-	toprim domain-containing protein	A0A077K8T2	Ralstonia_phage	6.7e-198	41.6
WP_171010060.1\|2847877_2848219_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_137710130.1\|2848218_2848707_-	hypothetical protein	NA	NA	NA	NA
WP_137710129.1\|2848703_2849222_-	hypothetical protein	NA	NA	NA	NA
WP_137710128.1\|2849218_2849671_-	hypothetical protein	NA	NA	NA	NA
WP_137710127.1\|2849667_2849868_-	hypothetical protein	NA	NA	NA	NA
WP_137710126.1\|2849864_2850149_-	hypothetical protein	NA	NA	NA	NA
WP_137710125.1\|2850148_2850442_-	hypothetical protein	NA	NA	NA	NA
WP_171010059.1\|2850486_2851071_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_171010058.1\|2851489_2852467_+	hypothetical protein	NA	NA	NA	NA
WP_137710121.1\|2852486_2853092_+	hypothetical protein	NA	NA	NA	NA
WP_137710120.1\|2853088_2854099_-	phage late control D family protein	R4JDM6	Burkholderia_phage	8.0e-72	45.5
WP_137710455.1\|2854095_2854491_-\|tail	phage tail protein	A0A2H4JG54	uncultured_Caudovirales_phage	2.8e-28	48.8
WP_137710119.1\|2854510_2857030_-\|tail	phage tail tape measure protein	V9IQL1	Stenotrophomonas_phage	1.2e-71	46.8
WP_137710118.1\|2857029_2857167_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.5e-05	61.8
WP_137710117.1\|2857175_2857484_-\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	9.7e-21	61.8
WP_137710116.1\|2857546_2858062_-\|tail	phage major tail tube protein	A0A2H4J916	uncultured_Caudovirales_phage	1.6e-44	54.4
WP_137710115.1\|2858101_2859277_-\|tail	phage tail sheath subtilisin-like domain-containing protein	F1BUU3	Erwinia_phage	1.4e-112	54.9
WP_137710114.1\|2859291_2859642_-	GPW/gp25 family protein	V9IQW0	Stenotrophomonas_phage	1.6e-24	53.5
WP_137710113.1\|2859641_2860196_-\|plate	phage baseplate assembly protein V	F1BUP5	Erwinia_phage	7.3e-19	33.7
WP_137710454.1\|2860354_2861083_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_137710112.1\|2861470_2861728_-	hypothetical protein	NA	NA	NA	NA
WP_137710111.1\|2861739_2862123_-\|tail	phage tail protein	M4QQ48	Micromonas_pusilla_virus	4.2e-05	43.1
WP_137710110.1\|2862133_2864527_-	hypothetical protein	V9IQX0	Stenotrophomonas_phage	2.3e-45	38.6
WP_137710109.1\|2864538_2865090_-\|tail	phage tail protein I	V9IQK7	Stenotrophomonas_phage	1.1e-46	51.4
WP_137710108.1\|2865086_2865980_-\|plate	baseplate J/gp47 family protein	V5YTH6	Pseudomonas_phage	4.7e-76	55.2
WP_137710107.1\|2866085_2866904_+	FRG domain-containing protein	NA	NA	NA	NA
WP_137710106.1\|2866938_2867610_-	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	6.2e-12	41.8
WP_137710105.1\|2867606_2868122_-\|tail	phage tail protein	E5E3R4	Burkholderia_phage	2.9e-25	49.6
WP_137710104.1\|2868121_2868379_-	hypothetical protein	NA	NA	NA	NA
WP_137710103.1\|2868350_2868830_-	hypothetical protein	NA	NA	NA	NA
WP_137710102.1\|2868834_2869317_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0Z0F0	Vibrio_phage	2.3e-29	45.2
WP_137710101.1\|2869322_2869655_-	hypothetical protein	NA	NA	NA	NA
WP_171010087.1\|2869658_2869889_-\|tail	tail protein X	K4PAW7	Burkholderia_phage	5.9e-07	43.1
WP_137710100.1\|2869888_2870371_-\|head	head completion/stabilization protein	E5E3S2	Burkholderia_phage	9.2e-34	52.5
WP_137710099.1\|2870367_2870595_-	hypothetical protein	NA	NA	NA	NA
WP_137710098.1\|2870715_2871573_-\|terminase	terminase	A0A077K804	Ralstonia_phage	7.3e-26	34.6
WP_137710097.1\|2871615_2872668_-\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	2.2e-80	45.1
WP_137710096.1\|2872722_2873568_-\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	1.1e-42	43.6
WP_137710095.1\|2873732_2875601_+	oxidoreductase	A4JWU9	Burkholderia_virus	2.1e-174	53.1
WP_137710094.1\|2875597_2876641_+\|portal	phage portal protein	E5E3X1	Burkholderia_phage	5.5e-100	53.9
WP_137710093.1\|2876731_2876890_+	SpoIIIAH-like family protein	NA	NA	NA	NA
WP_048578749.1\|2876992_2877382_+	hypothetical protein	NA	NA	NA	NA
WP_137710092.1\|2877505_2877964_-	DUF2059 domain-containing protein	NA	NA	NA	NA
WP_137710091.1\|2878460_2879524_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_137710090.1\|2879903_2880410_+\|transposase	transposase	NA	NA	NA	NA
WP_011950834.1\|2880528_2881740_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	3.0e-97	48.0
WP_171407198.1\|2881849_2882416_+\|transposase	IS110 family transposase	NA	NA	NA	NA
2883919:2883938	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2995477 : 3044901

Wolbachia_phage(33.33%)

integrase,transposase,tRNA,protease

attL 3010813:3010829|attR 3029250:3029266

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_137709083.1\|2995477_2996419_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	1.1e-22	35.2
WP_137710044.1\|2996793_2997135_+\|transposase	transposase	NA	NA	NA	NA
WP_137710043.1\|2997146_2997530_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	5.2e-08	30.1
WP_137710042.1\|2997725_2999795_+	recombinase family protein	NA	NA	NA	NA
WP_137710041.1\|3000269_3001781_-	Fic family protein	NA	NA	NA	NA
WP_137710040.1\|3002483_3002747_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_137710039.1\|3002746_3003175_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_137710038.1\|3004035_3004158_+	copper-binding protein	NA	NA	NA	NA
WP_137710037.1\|3004252_3006346_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_137710446.1\|3006534_3006939_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_137710036.1\|3008006_3010082_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_171010054.1\|3010318_3010792_+	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA
3010813:3010829	attL	NA	NA	NA	NA
WP_137710034.1\|3011486_3012686_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_137710033.1\|3012682_3014467_+	siderophore biosynthesis protein	NA	NA	NA	NA
WP_137710032.1\|3014463_3015627_+	MFS transporter	NA	NA	NA	NA
WP_137710031.1\|3015640_3017449_+	iron transporter	NA	NA	NA	NA
WP_137710030.1\|3017445_3018678_+	type III PLP-dependent enzyme	NA	NA	NA	NA
WP_137710029.1\|3018661_3019459_+	siderophore biosynthesis protein SbnG	NA	NA	NA	NA
WP_137710028.1\|3019727_3020207_+	bacterioferritin	NA	NA	NA	NA
WP_137710027.1\|3020326_3020986_+	cation transporter	NA	NA	NA	NA
WP_137710026.1\|3021462_3022083_+	hypothetical protein	NA	NA	NA	NA
WP_137710025.1\|3022075_3023269_-	hypothetical protein	NA	NA	NA	NA
WP_137710024.1\|3023564_3024200_+	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA
WP_137710023.1\|3024301_3026629_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_137710022.1\|3026625_3027744_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_137710021.1\|3027747_3029541_+	TniQ family protein	NA	NA	NA	NA
3029250:3029266	attR	NA	NA	NA	NA
WP_137710020.1\|3029527_3031393_+	TniQ family protein	NA	NA	NA	NA
WP_044660594.1\|3031549_3032113_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_137710445.1\|3032121_3032628_+	membrane-like protein	NA	NA	NA	NA
WP_025551889.1\|3032956_3033688_-	hypothetical protein	NA	NA	NA	NA
WP_025160613.1\|3033917_3034367_+	DUF3576 domain-containing protein	NA	NA	NA	NA
WP_137710019.1\|3034481_3037052_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	7.0e-173	40.1
WP_103001246.1\|3037151_3037646_+	hypothetical protein	NA	NA	NA	NA
WP_137710018.1\|3037642_3038668_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_044662858.1\|3038765_3039170_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_048577326.1\|3039326_3041402_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_137709147.1\|3041954_3043097_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_137710016.1\|3043944_3044901_-\|protease	retroviral-like aspartic protease family protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP053223

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP053225

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP053222

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection