CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027869	Curtobacterium sp. SGAir0471 chromosome, complete genome	13 crisprs	DEDDh,cas3,RT,WYL,csa3	1	4	0	0

Cas Category Instructions

Results visualization

1. NZ_CP027869

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027869_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_1

11606-11748

Orphan

Consensus_repeat	Method
TTCGGCGCGCCGCTCCGCGATGGTCGCCCCCGCCACGGGCGTCCCCTTTCCTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_1

>merge|NZ_CP027869|1|11606-11748|CRISPRCasFinder
TTCGGCGCGCCGCTCCGCGATGGTCGCCCCCGCCACGGGCGTCCCCTTTCCTCGCTCCGCCCGGTTGGGTCGTCGTGCTCGTCTGCGCTTTCGGCGCGCCGCTCCGCGATGGTCGCCCCCGCCGCGGGCGTCCCCTTTCCTCG

>NZ_CP027869|1|1|11606-11748|CRISPRCasFinder
TTCGGCGCGCCGCTCCGCGATGGTCGCCCCCGCCACGGGCGTCCCCTTTCCTCG	CTCCGCCCGGTTGGGTCGTCGTGCTCGTCTGCGCT
TTCGGCGCGCCGCTCCGCGATGGTCGCCCCCGCCGCGGGCGTCCCCTTTCCTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137766076.1\|22461_23826_-\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP027869.1\|WP_137768588.1\|8239_10876_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP027869.1\|WP_137766074.1\|19562_21017_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
NZ_CP027869.1\|WP_022907010.1\|14539_14794_-\|cell-division-protein-CrgA	unknown	unknown	gnl\|CDD\|377706
NZ_CP027869.1\|WP_058748787.1\|5422_5923_+\|DUF721-domain-containing-protein	unknown	unknown	gnl\|CDD\|179552
NZ_CP027869.1\|WP_137766075.1\|21013_22462_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NZ_CP027869.1\|WP_137768587.1\|6086_8066_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP027869.1\|WP_137768589.1\|15902_17708_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP027869.1\|WP_058728337.1\|0_1467_+\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
NZ_CP027869.1\|WP_137766072.1\|14876_15521_+\|C26-family-cysteine-hydrolase-domain-containing-family	unknown	unknown	gnl\|CDD\|181107
NZ_CP027869.1\|WP_137766069.1\|12077_12653_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_058728335.1\|3230_4118_+\|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236582
NZ_CP027869.1\|WP_058728332.1\|10868_11276_+\|DUF3566-domain-containing-protein	unknown	unknown	gnl\|CDD\|378809
NZ_CP027869.1\|WP_137766070.1\|12769_13309_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223725
NZ_CP027869.1\|WP_137766073.1\|17850_19566_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP027869.1\|WP_058728336.1\|2015_3161_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|236089
NZ_CP027869.1\|WP_137766071.1\|13314_14181_+\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137766076.1\|22461_23826_-\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	4.60905e-77
NZ_CP027869.1\|WP_137768588.1\|8239_10876_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP027869.1\|WP_137766074.1\|19562_21017_-\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	4.9273e-91
NZ_CP027869.1\|WP_022907010.1\|14539_14794_-\|cell-division-protein-CrgA	gnl\|CDD\|377706	pfam06781, CrgA, Cell division protein CrgA. CrgA is a trans-membrane (TM) protein, first described in Streptomyces as being required for sporulation through the coordination of several aspects of reproductive growth. In Mtb (Mycobacterium tuberculosis ) CrgA is a central component of the divisome, and consists of 93 residues with two predicted TM helices (TM1: residues 29-51; and TM2: residues 66-88). CrgA facilitates the recruitment of the proteins essential for peptidoglycan synthesis to the divisome and also stabilizes the divisome. Reduced production of CrgA results in elongated cells and reduced growth rate, and loss of CrgA impairs peptidoglycan synthesis. CrgA has homologs in other actinomycetes.	3.50729e-30
NZ_CP027869.1\|WP_058748787.1\|5422_5923_+\|DUF721-domain-containing-protein	gnl\|CDD\|179552	PRK03195, PRK03195, DUF721 family protein.	5.33128e-32
NZ_CP027869.1\|WP_137766075.1\|21013_22462_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	2.08342e-73
NZ_CP027869.1\|WP_137768587.1\|6086_8066_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
NZ_CP027869.1\|WP_137768589.1\|15902_17708_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.76974e-119
NZ_CP027869.1\|WP_058728337.1\|0_1467_+\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP027869.1\|WP_137766072.1\|14876_15521_+\|C26-family-cysteine-hydrolase-domain-containing-family	gnl\|CDD\|181107	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II.	4.37251e-105
NZ_CP027869.1\|WP_137766073.1\|17850_19566_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.87217e-120
NZ_CP027869.1\|WP_058728335.1\|3230_4118_+\|decarboxylating-6-phosphogluconate-dehydrogenase	gnl\|CDD\|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	2.93773e-170
NZ_CP027869.1\|WP_058728332.1\|10868_11276_+\|DUF3566-domain-containing-protein	gnl\|CDD\|378809	pfam12089, DUF3566, Transmembrane domain of unknown function (DUF3566). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 136 to 304 amino acids in length. This region represents a transmembrane region found at the C-terminus of the proteins.	1.48285e-31
NZ_CP027869.1\|WP_137766070.1\|12769_13309_+\|peptidylprolyl-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	3.03187e-58
NZ_CP027869.1\|WP_058728336.1\|2015_3161_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|236089	PRK07761, PRK07761, DNA polymerase III subunit beta; Validated.	0
NZ_CP027869.1\|WP_137766071.1\|13314_14181_+\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	8.96757e-37

>NZ_CP027869.1|WP_058728332.1|10868_11276_+|DUF3566-domain-containing-protein
MSSVAEKLQKKAKRPTGTRQVRLRLVYLDFWSMVKLSFLIALAGSIVIIVATALVWIILNQTGVFTQIDALLKDVTGQNSYSIMDQFSLGQVLGFSVVVGILNVVVGTVLGAIVSVLYNLSVRITGGLLVGFTNN
>NZ_CP027869.1|WP_137768588.1|8239_10876_+|DNA-gyrase-subunit-A
MVHGEVGDIVVSGDRISQVDLQLEMQRSYLDYAMSVIVGRALPEVRDGLKPVHRRVIYAMFDGGYRPDRAFSKCSRVVGDVMGQFHPHGDTAIYDTLVRLVQPWSLRYPLALGQGNFGSPGNDGAAAPRYTETKMAPLALEMVRDIDEDTVDFQDNYDGRTQEPSILPARFPNLLVNGSVGIAVGMATNIPPHNLREVAEGAKWALEHPDATREELLAALMQRIKGPDFPTGAQILGTKGIQDAYRTGRGSITMRAVVNVEEIQGRTCLVVTELPYQVNPDNLAIRIAEGVKDGKLAGIADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQENFGANMLAIVDGVPRTLALDGFISAWVDHQVDVIVRRTRFRLREAEKRAHILRGYLAALDALDEVIALIRRSPDVEEARTGLMDLLSVDEIQARAILELQLRRLAALERQKIHDEAEELERKIADFQDILASETRQRTIIGDELTEIVERFGDDRRTEVMLGYDGDMSIEDLIPEEEMVVTITRGGYVKRTRSDNYRSQHRGGRGVKGAQLRADDIVEHFFVTTTHHWLLFLTDQGRVYRAKAYELQEASRDAKGQHVANLLAMQPDEQIQQVLDIRDYEAAQYLVLATEQGLVKKTALTEYDTNRTGGIIAINLREGDKLVQALLVDETDDLLLVSKHGMSLRFTATNDTLRPMGRSTSGVKGMSFRDDDALLAARVVSDDGYVWVMTEGGYAKRTSVDQYRVQGRGGLGIKVAKLAADRGDLVGALIVGEDDEVLVVLQSGKVVRSAVSEVPAKGRDTMGVVFARFAENDRIIAVARNSERNLDDQDDADPEIEPAGPVETVSPAEAAPEPADPADNAPTNPEPVEDEAGEDQSNNE
>NZ_CP027869.1|WP_137768587.1|6086_8066_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MPQGETEQAPQAEPSYGADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVQEIVDNSVDEALAGYCDHIDVTIREDGGVRVVDNGRGIPVDTHAAEGVSTLQVVLTVLHAGGKFGGGGYAVSGGLHGVGSSVVNALSSELDVEVRRQGHVWRQSYTDGVPVAPVSQDEATDTTGTTITFWPNADIFETVEFDYETLRTRFQQMAFLNKGLRITLTDERTPDEGEESRKDSFRYERGLPDYVEYLNAQKKADLVHPDVIAIEAEDTERKIALEIAMQWNTSYQESVHTFANTINTHEGGTHEEGFRAALTSLVNRYARETKIIKEKDDNLLGDDIREGLTAVISVKLGEPQFEGQTKTKLGNTEAKSFVQRVVGTELTHWFESNPAQARDVVRKAIQASQARLAARKARETTRRKGLLESGGMPGKLKDCQSKDPTLSEIFMVEGDSAGGSAVQGRNPMTQAILPLRGKILNVEKARLDRALANQEIQSMITAFGAGIGEDFDPDKARYHKIVLMADADVDGQHITTLLLTLLFRYMRPLIERGYVYLAQPPLYRLKWSNAADEYVFSDRERDALLQAGLAAGKRIPKDNGIQRYKGLGEMDYKELWDTTMNPDTRTLLQVTLEDAAAVDSVFATLMGEDVESRRQFIQQNAKDVRFLDI
>NZ_CP027869.1|WP_058748787.1|5422_5923_+|DUF721-domain-containing-protein
MPKPWKPSEPARVYRHLRAVFGDPSLRTVDARRRRSRELDADTVPYGKGREPRGLGDVVGALAQELGWSEPLARSELFVDWPAVVGDELAKHSRPMTIDDGTLVIRCDSTAWATQLRLMRATVTTTIAERHPGAGVQSIRVSGPDAPTWKRGPRTVQGRGPRDTYG
>NZ_CP027869.1|WP_058728335.1|3230_4118_+|decarboxylating-6-phosphogluconate-dehydrogenase
MHIGLVGLGRMGNNMRARLRNAGIEVTGYDANPAVSDVADLGALAAALPEGKKLVWVMVPHGKITDDVITDLAGVLSEGDLVIDGGNSKWLDDTVHAEQLGAKGIRYMDAGVSGGVWGKDNGYGLMVGGAPEDVEFAMPVFDALRPEGPREEGFSHAGPVGAGHYAKMVHNGIEYAIMQAYGEGYELLEAKDIIKDVPAVFAGWQRGTVVRSWLLDLMVLALNEDPKLDAIEGYVEDSGEGRWTVEEAIEHAVPMPTISASIFARFVSRQGSASPTMKAVAALRNQFGGHAVKKA
>NZ_CP027869.1|WP_058728336.1|2015_3161_+|DNA-polymerase-III-subunit-beta
MKFEVNRDVFSEAVSFAVKLLPQRTTLPILSGVLIHAEGDRLTLSSFDYEVSAQTSITAQIDEPGTVLVSGRLLNDISSRLPNAPVTFTTEDTKISVTCGSAHFTLLSMPVEEYPTLPEIGEQTGVVPGDAFSEAVSQVAVAASRDDVTPVITGVQLEVGDNDLSLIATDRYRVAVRTIAWDSGRVGSDPLHALVPARTLQEVGRTFGSASTVSVSISGSSDRELIAFHADDKTVTSLLIKGNYPPVRRLFPETVDDHAVINTAELVEAVRRVSLVLEREAALRFSFSVDGLTLEAIGSEQAQASESISALLTGEETVVSLKPAFLLDGLNAVHSEFVRISFTKTENPNKPGPVLITGQTSQEAPATDGYRYLLQPNLLLR
>NZ_CP027869.1|WP_058728337.1|0_1467_+|chromosomal-replication-initiator-protein-DnaA
MTMPADPVEDLWSSVLGLLSEDDRITPQLHGFLNLVEPKGVLAGTLYLEVPNDLTRGMLEQRIRVPITEAVSRVGDDSVANFAITVNPDMASEPRVDPVVASHVPEYAEPVQAPVEQSAAPRQYIEAPFVPSQIDSPGTGGRPESRLNPKYNFDNFVIGSSNRFAHAAAVAVAEAPAKAYNPLFIYGDSGLGKTHLLHAIGHYAESLYPGIRVRYVSSEEFTNDFINSIANNRSNQFQQRYRDIDILLIDDIQFLQGKDSTQEAFFHTFNTLHDHNKQVVITSDVAPKHLTGFEDRMRSRFEWGLITDVQAPDLETRIAILRKKAQSDHLQVPDDILEFMASKVSSNIRELEGTLIRVTAFASLNRTAVDMALVQTVLKDLITLDDDNVIAPTDIINHTAEYFKLSVDDLYGSSRSQAIATARQIAMYLCREMTSLSLPKIGQLFGNRDHTTVMYANKKITELMKERRSIYNQVTELTSRIKQDRRYR
>NZ_CP027869.1|WP_137766069.1|12077_12653_-|hypothetical-protein
MTTIEIPRKRRKQIKKLKGKTASLLGEQRKVLEHANAILAEARSHAADAARKDIAPRVQNAIDNGIRPAVATGVHAATSAAHSASHRFQTEVVPGLVATAGSVMSVKDLAKDPRVKKIVKDARKKGKKAKKAAAKYTPGHQKKGLGFGGVALIVVGVVAVAGAAYAAYQTLRADDDLWVADDADTASKPAA
>NZ_CP027869.1|WP_137766070.1|12769_13309_+|peptidylprolyl-isomerase
MSLHTAVATIHTNKGDIRVNLFGNHAPKTVKNFVDLATGKQEWTHPGTGKVSTDKLYDGVVFHRIIKDFMIQGGDPLGQGIGGPGYRFDDEIHPELTFQKPYIFAMANAGIQGGRGTNGSQFFITTVATPWLQGKHTIFGEVADDESRAVVDAIEGVPTDGRDKPLEDVVIESIDVEDV
>NZ_CP027869.1|WP_137766071.1|13314_14181_+|rhomboid-family-intramembrane-serine-protease
MTDQAPGRDNYCYRHPDRQSFILCQRCGRTICTECQTPAAVGVHCPECVREQRAQFQANRRASGAPGGLTVARRRFAMMDQKATTVIIAVSVVVWLLNLLSGGVVNQWLSYWTPLVGTQPWRLVTGLFVHSSIFHIGFNMLAVFIFGRILENLLGTWRFLALYFLAGLGGDLAVSLLTPGTPVVGASGAIFGLFAAFFVIQRSLGYNAVQLLVIMGLNLVVGFLPGTNISWQAHVGGIVLGFVTGFVFSKTRNVRQRGLQIGLLVAEAVLLVAGIGAAYISIGGYAIG
>NZ_CP027869.1|WP_022907010.1|14539_14794_-|cell-division-protein-CrgA
MAKDKDRTKPARRTRADSVDTAGDQPNPVWFKPVMFGFMLIGLAWVIVFYISNTTLPVPSLGSWNILIGFGIMFIGFLMTTRWR
>NZ_CP027869.1|WP_137766072.1|14876_15521_+|C26-family-cysteine-hydrolase-domain-containing-family
MTKILVVDNYDSFVYTLNGYLQQLGADTDVVRNDAFPEAEIADRIADYDGVLLSPGPGTPADAGVSIPTVRAAIDAETPLLGVCLGHQAIAEALGATVTHAEELMHGKTSQVDHDDSVLFTGVPHPFTATRYHSLAIVDGTVPDELTVTARTGGGVIMGVEHRDHPVYGVQFHPESVLTEGGYRMVGNWLETTGLAGAAERAAALNPLIAEHRS
>NZ_CP027869.1|WP_137768589.1|15902_17708_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase
MTAGITLLANRYEIGEAIGRGGMATVHVGTDTRLGRKVAVKLLKPSLATDPTFRIRFRQEAQAAARMAHPTIVRVYDAGEETVTEASGAQVQVPYIVMEHVDGRALSDVLDDGPLDPAEAVRITEGILTALEYSHRAGVVHRDIKPANVMVTHGGQVKVMDFGIARAITDTSATVAQTTSILGTASYFSPEQARGETVDARTDLYSTGVLLFELLTGRPPFVGDSPVAVAYQHVSEQPAAPSTLAPEVSPALDAVTLHALVKDRTRRFQTAAEFRTDLQQAAAGKVPVSTRRLQQDAAHDASTMLFGVNPRTTSNPAVAFRELDDDAADHRPQRTQNRPPVAWIWLGIILTAAVIAGVVFFVANLQPGKAPVSSSVSVPNVVGATWDSARTELEKRELSAVEVGENSDDVAKDTVIRTEPGSGTNVARKQSIRVVVSLGPEQVAVPDVANQTQDAAEQALKAAGFAVGAINSGYSNDVPEGTVISTDPGSATQLTKGSVVNLTVSNGKVQLPDVTQQPISAANETLANLGLNVVASPTYTCTGSIVVQQSAPKGDIAQGSTITLTYCAASAQRPSQAPSAPAAPAQGGGGTGSVGNGDGGQ
>NZ_CP027869.1|WP_137766073.1|17850_19566_-|serine/threonine-protein-kinase
MRPTSGLTFGGRYQLSSRVAIGGMGEVWQATDLVIGRTVALKILKDEYLGDPGFLERFRAEARHAALVNHEGIANVFDYGEEDGSAYLVMELVPGEALSTMIEREHTLPVDKVLDIVAQTANALQAAHAVGLVHRDIKPGNLLITPDGRVKITDFGIARIADQVPLTATGQVMGTVQYLSPEQASGHPASPSTDIYSLGIVAYECLAGRRPFTGESQVAIAMAHINEQPPALPGDVPEPVSALVLSCIAKKPADRPATAANLARAAQALRRGDVAAATVAVPAVGGAGTVAFNPPQRPGDDAATALIGTQAGAVAGPGTPRSPAAPEDDEPKKKRAWIWWLVGVLAVLLIGGVIAAFALGGSDEPTPAPTSSSPTPTRSTPTPTPTTTRVFLNKSDYVGRNADEVRGELEGRGFEVTVQDGSPAPTAQQAETVADITPTGSVVEGTLVTITQYTTPPTANKPNTPNAGTVSESGQVTFSWSAATCPDGYTVSKYSWTVSGGKDASGATSGDTSSTAVTIQADAVGAPVSFSYTVTCGSLAASESSDPATATWEQATPTPTETPSATPTRAP
>NZ_CP027869.1|WP_137766074.1|19562_21017_-|penicillin-binding-protein-2
MNRQLRGVSTVIVLMFVALFVSTTSIQFFAADSLRADSRNSRTILDSYSTKRGAILVDGSPIAESTPSDDQYQYQRKYTNGALYSAVTGYFTIGQGNTGIESAENAVLSGNSDASFFQNLNAILTGQDVQGDNVNLTIDPAVQQAAYDALGENSGAVVAIQPSTGKILAMVSKPAYDPNALTSHDTAQVKQQYDALLQQTPTPLQNRAIGGDLYTPGSVFKLVVASAALKDGKYTLDSEFPNPSRLQLPGTSTYINNAEGGSCGGGETVQLRTAIQYSCNIPFAELGQKLGYDTIKSVADEYGFGDAIEVPMRATASQYPEVDSTAQLMLSAFGQASVRVSPLQMAMVSAGIANGGKVMQPSLVDSITTSDLKTVESFSPKQYSDPLSGSEAADLTEAMQSVVNAGTGTNAKIDGVDVAGKTGTAEGGTGDPYTLWFTGFAPAKDPEVAVAVVVGNGGGLGQSGVGNTVAAPVAKKVMEAVLNK
>NZ_CP027869.1|WP_137766075.1|21013_22462_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MSTATAQSFTQAITIKLREPARARNLELVLLVIACGICAGAMVLVQLGTKGRIFDTGVLWVGAGILGLALVMHVVLRIVAKHADPFVLPIALVLNGIGIAEIYRIDVHNGLTGWDAIGVKQIVWTMLAMVLATITVVVVRNHRFLQRYRYIFMFATIALLLLPMLPGIGENIGGARVWIRIGPFSFQPGELAKITMALFFAGYLVTARDSLSIVGKKFAGMTFPRARDLGPILVMWASAMAVLVFQRDLGTALLYFGLFLVMIYVATARLGWVVIGLGLFIGGALVAQSVLVYVRGRFEQWLDPFNQAIFDRQTQGSYQLVQGLFGFANGGITGTGLGQGRPYITPVANADYIVASLGEELGLIGVFAILALFIVLASRGLRVAFMAQDDFGKLLGVGFGFIIALQVFVVVGGITRIIPVTGLTTPFMAAGGSSLIANWIIAAMLLRLTDSIPAEQRVQQGAVPAARGRSGRGATTRKERSR
>NZ_CP027869.1|WP_137766076.1|22461_23826_-|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MTARTLSAAVSHVGRIRANNQDSGYAGTHLFAVADGMGGHAGGDVASAIAIRRIREVDREFPSAHDAEFALQSALIAANQLITETVFEHQELTGMGTTVSALIRVGEQIAIAHIGDSRIYRMRDGELQQITSDHTFVQRLVDSGRITPEEAAVHPRRSVLMRVLGDVDAAPEVDTAVMDIQTGDRWLLCSDGLSSYLAEERIRHALASNMDANQVTQRLVKETLDHGAPDNVTVVVMDVTDTEPEDDDAAATTVGSAAAPLTFEASTGRKPIRLPTILLHPLKVSSVPEDSHFEPESDQYFAELIAEDRRRRIRRRVAWSIALVVAVAALVGAVFLGWRITQAHYYVGTDRGTVAIYQGVQQSIGPIALSDVYEDTDIAVSSLPDYTRENVRSTINATSLSDARDIVDRLRKAAETGQDQAGTGGHTGSSPSPTPSGSASPSDDASPSESPGAG

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Crispr_ID: NZ_CP027869_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_2

38035-38135

Orphan

Consensus_repeat	Method
CGGTGTCGGGATCGGCTGGGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_2

>merge|NZ_CP027869|2|38035-38135|CRISPRCasFinder
CGACGTCGGGAGCGCCGGTGTCGGGATCGGCTGGGTCGTGGCCGTGGCCGTGGCCGTGGCCGTGGCCGTGGCCGCGGTCGGTGTCGGGGTCGGCTGGGTCG

>NZ_CP027869|2|2|38035-38135|CRISPRCasFinder
CGACGTCGGGAGCGCCGGTGTCG	GGATCGGCTGGGTCGTGGCCGTGGCCGTGGCCGTGGCCGTGGCCGTGGCCGCGGT
CGGTGTCGGGGTCGGCTGGGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137766082.1\|30436_30907_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP027869.1\|WP_137766084.1\|31497_32289_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP027869.1\|WP_137766087.1\|35192_36896_-\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|119333
NZ_CP027869.1\|WP_137768591.1\|43232_44018_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP027869.1\|WP_058728313.1\|32379_33423_-\|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl\|CDD\|381376
NZ_CP027869.1\|WP_137766081.1\|28524_29406_+\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|252986
NZ_CP027869.1\|WP_111228184.1\|29866_30310_-\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_CP027869.1\|WP_137766091.1\|42120_43236_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP027869.1\|WP_137766096.1\|49286_49871_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP027869.1\|WP_137766090.1\|41289_41841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137766088.1\|39710_40529_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP027869.1\|WP_137766083.1\|30970_31498_+\|phenolic-acid-decarboxylase	unknown	unknown	gnl\|CDD\|368644
NZ_CP027869.1\|WP_137766095.1\|48486_49125_-\|AmiS/UreI-transporter	unknown	unknown	gnl\|CDD\|259833
NZ_CP027869.1\|WP_137766094.1\|47099_48344_-\|monooxygenase	unknown	unknown	gnl\|CDD\|173852
NZ_CP027869.1\|WP_137766086.1\|33794_34352_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP027869.1\|WP_137766089.1\|40551_41004_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137766093.1\|45701_47024_+\|carboxylesterase-family-protein	unknown	unknown	gnl\|CDD\|365897
NZ_CP027869.1\|WP_137766085.1\|33564_33747_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137766092.1\|44284_45580_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340871
NZ_CP027869.1\|WP_058728310.1\|34418_35036_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137766082.1\|30436_30907_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	9.7829e-09
NZ_CP027869.1\|WP_137766084.1\|31497_32289_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	5.87878e-12
NZ_CP027869.1\|WP_137766087.1\|35192_36896_-\|beta-N-acetylhexosaminidase	gnl\|CDD\|119333	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	6.08188e-180
NZ_CP027869.1\|WP_137768591.1\|43232_44018_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	7.4422e-16
NZ_CP027869.1\|WP_058728313.1\|32379_33423_-\|L-glyceraldehyde-3-phosphate-reductase	gnl\|CDD\|381376	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.	0
NZ_CP027869.1\|WP_137766081.1\|28524_29406_+\|manganese-catalase-family-protein	gnl\|CDD\|252986	pfam05067, Mn_catalase, Manganese containing catalase. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Two families of catalases are known, one having a heme cofactor, and this family that is a structurally distinct family containing non-heme manganese.	9.21799e-93
NZ_CP027869.1\|WP_111228184.1\|29866_30310_-\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	5.28431e-34
NZ_CP027869.1\|WP_137766091.1\|42120_43236_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.01423e-45
NZ_CP027869.1\|WP_137766096.1\|49286_49871_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.64564e-05
NZ_CP027869.1\|WP_137766088.1\|39710_40529_+\|SDR-family-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	1.63276e-87
NZ_CP027869.1\|WP_137766083.1\|30970_31498_+\|phenolic-acid-decarboxylase	gnl\|CDD\|368644	pfam05870, PA_decarbox, Phenolic acid decarboxylase (PAD). This family consists of several bacterial phenolic acid decarboxylase proteins. Phenolic acids, also called substituted cinnamic acids, are important lignin-related aromatic acids and natural constituents of plant cell walls. These acids (particularly ferulic, p-coumaric, and caffeic acids) bind the complex lignin polymer to the hemicellulose and cellulose in plants. The Phenolic acid decarboxylase (PAD) gene (pad) is transcriptionally regulated by p-coumaric, ferulic, or caffeic acid; these three acids are the three substrates of PAD.	1.05041e-96
NZ_CP027869.1\|WP_137766095.1\|48486_49125_-\|AmiS/UreI-transporter	gnl\|CDD\|259833	cd13429, UreI_AmiS_like_2, UreI/AmiS family, subgroup 2. Putative transporters related to proton-gated urea channel and putative amide transporters. This subfamily includes putative UreI proton-gated urea channels and putative amide transporters (AmiS of the amidase gene cluster). Helicobacter pylori UreI (HpUreI), a proton-gated inner membrane urea channel opens in acidic pH to allow urea influx to the cytoplasm. There urea is metabolized, producing NH3 and Co2, leading to buffering of the periplasm. This action is essential for the survival of H. pylori in the stomach, and has been identified as a mechanism that could be clinically targeted to prevent various illnesses associated with infection by H. pylori. UreI and the related amide channels (AmiS) appear to function as hexamers, and have 6 predicted transmembrane segments. UreI has also been shown have a lipid "plug" in the center of the hexamer. Urea enters at the periplasmic opening of UreI and must pass 2 constriction sites, one on each side of a conserved Glu (Glu 177, H. pylori numbering), to reach the cytoplasm. Urea/thiourea selectivity is diminished by mutation of a conserved Trp to Ala or Phe in constriction site 2 (cytoplasmic). Channel functionality is greatly diminished by mutation of a conserved Trp in constriction site 1 (periplasmic) and a conserved Tyr in constriction site 2, and to a lesser extent a conserved Phe in site 1. In the cytoplasm, urease hydrolyzes urea to form ammonia and carbamate, which decomposes to carbonic acid. UreI is fully open at pH 5.0 to facilitate urea influx, but closes at neutral pH, preventing over-alkalization. Glu 177 (H. pylori numbering) is present in urea channel proteins, but absent in the related amide channels, suggesting that it plays a role in urea specificity.	3.91126e-48
NZ_CP027869.1\|WP_137766086.1\|33794_34352_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.82135e-12
NZ_CP027869.1\|WP_137766094.1\|47099_48344_-\|monooxygenase	gnl\|CDD\|173852	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C. DszC is a flavin reductase dependent enzyme, which catalyzes the first two steps of DBT desulfurization in mesophilic bacteria. DszC converts DBT to DBT-sulfoxide, which is then converted to DBT-sulfone. Bacteria with this enzyme are candidates for the removal of organic sulfur compounds from fossil fuels, which pollute the environment. An equivalent enzyme tdsC, is found in thermophilic bacteria. This alignment also contains a closely related uncharacterized subgroup.	3.21342e-121
NZ_CP027869.1\|WP_137766093.1\|45701_47024_+\|carboxylesterase-family-protein	gnl\|CDD\|365897	pfam00135, COesterase, Carboxylesterase family.	1.1222e-74
NZ_CP027869.1\|WP_137766092.1\|44284_45580_+\|MFS-transporter	gnl\|CDD\|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.70431e-28
NZ_CP027869.1\|WP_058728310.1\|34418_35036_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.57074e-07

>NZ_CP027869.1|WP_137766087.1|35192_36896_-|beta-N-acetylhexosaminidase
MLIPRPRSRADGTGSFTLDERTRVTADPAAEPVAQYLQQVLRASTRLPLFGAAGATDVPVIALRIAADPDDLPAGPGGDRSEAFRLEVTTDGVVVTGGGPAGVFYGVQALLQLLPADVYRRGQVRNDAWTLPVTVVEDAPAFAWRGVMLDVARHFRTKAEVLRLVDQLAVHRINRLHFHLTEDQGWRIEITEYPRLTEVGSWRTESQVGAHVPDDDGTLRVAAKDGRPHGGSYTQDDVREIVAYAADRFVTVVPEIETPGHVRAALAAYPELGVHPDRQLDVWTEWGIAHDVLNAEERTVQFFRDVLDEVIALFPSEYVGIGGDECPKDQWEDDPRTQERIRELGLEDEEQLQAWIVGQLAAHVESHGRRAFGWDEILEGGALSPSATVVSWRGLQGAVTAARRGHDVISTPDDQVYLDYRQSDLPNEPIPVSIVLTVDDVYAFDPVPAELTEAERAHVVGGQANMWTEHVDSVRRLDYQLFPRVVALAEALWSADVAGPRDVGDFRQRLQHHLARLDALGVEYRHGSGPRPWEERPGVPGRPQTRAERAAYIDAVTANIADGGPTP
>NZ_CP027869.1|WP_058728310.1|34418_35036_+|TetR/AcrR-family-transcriptional-regulator
MTHEVDDDGATPPRRGGYRKGAERRAQILDEMIRMVAAQGVDASSLRSVADALGITHAALRHYFPSRDELLLAVYREHEVREQDAPDRMRSAIGDMRESASRNREVPGLVQLYTTLAADAVQEGHPATRDFMRERFSRLRADLAELIAADQAAGRIRADLDPVDLASLGIAASDGLQVQWLLDPDAVDGERVLRLLESIIPAADD
>NZ_CP027869.1|WP_137766086.1|33794_34352_+|MarR-family-transcriptional-regulator
MPLTVVRREHVHLYAREPRSKAAKVAVDALLKLQHAEEQQLEQARAESGLTKNEFLTVRYMLQAHRDGRAMGPKDLAVMLNVSNASVTKIVDGLVAKGDIVRVPHPTDRRAQVLEPTVQAAEKIDSSYARFHEAVVGVMDHLSSEDNEVLARCLSQITDALAGGAPAPVDEYTVDPDGAAEPNDS
>NZ_CP027869.1|WP_137766085.1|33564_33747_+|hypothetical-protein
MHSTYSGMPRSTRLSATHTRVGLTDPAVIDAYVTRRIQDPSLLSTRSEPSYADFFTAPTA
>NZ_CP027869.1|WP_058728313.1|32379_33423_-|L-glyceraldehyde-3-phosphate-reductase
MAYTAADDRYDSMPYRRTGRSGLDLPLLSLGYWHNFGDDKPFETQRAISRRAFDLGITHHDLANNYGPPYGAAEVNFGRLMREDFRPYRDEMVISTKAGWDMWPGPYGQGGGSRKYVLASLDQSLERMGLDYVDVFYSHRLDASTPLEETMGALHTAVQQGKALYVGISSYDAERSRQAVEILRDLGTPLLIHQPSYSMLNRWIEDEGLLDAAGELGFGVIGFTALAQGLLTGRYLDGVPEDSRAAAGKSLDAGTLTDEVVGHLRALDDIASERGQSLAQLALAWALRDERVTSLVIGASRVEQLEQNVAALGNLSFTDDELRRIDEHSVGVLDVDLWSGARSGQVS
>NZ_CP027869.1|WP_137766084.1|31497_32289_+|alpha/beta-fold-hydrolase
MATVPLRGVDPRTTPTTLDHEGRTVRGWQWEPQDGAADDAPVVLLVHGFSSTALGGQQLFVQTARHLVARGAVVRSHDRLGQGVSDGEFADITIRDEVDQVVAMIRAADRGQGVHVVAHSLGAVESALAAAREPSHVRTLTLWSPAGVVVDDITKHDEIQGQPLAPVRERGWFDFGGMPLGGAFIADVQDDLDVYGPVSGYTGPADVVHGTEDAIVPVSYGRRYAELLPGARLTVVDGADHGWSSVPFRERLLSLLDERLGLA
>NZ_CP027869.1|WP_137766083.1|30970_31498_+|phenolic-acid-decarboxylase
MSTQTTVEHPEPPQDLTGIVGHRFVYTYANGWQYEMYVKNATTIDYRIHTGHVGGRWVKDQTVDLVALAAGVYKVSWNEPTGTSVVVNVIPEQRVLHGTIFFPRWIELDGSKTVLFQNDHLDEMQRFRDEGPTYPIYVVPEFAHITLFEHVGEDDESVIDTAPGDLPAGWADLTN
>NZ_CP027869.1|WP_137766082.1|30436_30907_-|MarR-family-transcriptional-regulator
MQGTDGSEGTTQVARRLSDRVGPFRRALLRTSREVADLPDIPDAQVEVMRALAVGTTTPSTLASRLGLARSTVSNLVSAMETAGLLERRLAAGDGRRTELRLTALAEERLTAYDEASTSVLVAALDRLSPEDRAALAAALPALEHLHREVTRRDAR
>NZ_CP027869.1|WP_111228184.1|29866_30310_-|Hsp20/alpha-crystallin-family-protein
MTMQFDPFRELDRLAGSLLGAGAGAPRSMPMDLYRTGDHYVLDVDLPGIDPGSVDVDVDGSVLTIRAERTLGAPEGSQWLTRERQPGTFVRQLTLGDHLDTARISAAYDNGVLSVTIPVKESAKPRKIDVTTGGGAQQLAVGSGSAE
>NZ_CP027869.1|WP_137766081.1|28524_29406_+|manganese-catalase-family-protein
MYFHKQELQFTSTPDKPDAVYARKLQEVLGGQYGEISVAMQYQFQAWNMHMPGKYRDMVFGIGAEEMGHVEMLATMIAQLLEKSPLGITEDAVQDDPTVAAIVGGTDVQQGIVAGAGARPVDSDGNPWQGSYITASGNLLADFTANANAEMQGRVQVARLYHMTDDHGVRDLLSFLLARDTMHQNMWATAAAELREKGIEDFPVPNNFPQSKEHTEFSYQYLNFSDGAQAGDGPWASGPSFDGKGEYSYHDGPTSAVPMPPPTHPDVRFYGTTELPNVVEKTAGAVQDTLNKE
>NZ_CP027869.1|WP_137766088.1|39710_40529_+|SDR-family-oxidoreductase
MSRPRSPFRGLRALVTGASGGIGEELALGLAAAGADVVLVARSADRLDALAARIRRDHGVAAETVSADLATADGVDRVVTALSGTRVDVLVANAGVGDHGPFVEADPERIRTQIDLNCTAVVRLVHAFLPGMLERRLGGVMTVSSVAAFQPTPGMAVYGATKAFLLSFTEAIWQENRGSGVRFLALCPGATETGFFDEAARHPGAAGFLERGRQTPQQVAAVGLRAFARSGGPTVVSGFGNVVTANAHRFVPRGLMARLTEVATGGGGGRRR
>NZ_CP027869.1|WP_137766089.1|40551_41004_-|hypothetical-protein
MTAAVLVVGTGAAVGVHLEHAAEVARRLPPANATSEQVLRVYLHAAEAHDCAVTEALTAADASGTPGQSWCGQRQPTSWFDEHPDLLAHRNIGAVERIPADERGGVAEECIPVDVTETNMTGAEPGTLRGWQFCFHHTEDGWRLSDEGYG
>NZ_CP027869.1|WP_137766090.1|41289_41841_+|hypothetical-protein
MQNFRPRSAGIALAGALIAAGLVNAPAANAAARSSADATQSIDDTVPDSVTMETVHRAIDEARSAGAITAEHTAADGTTTVVIEGEDGTTLELNTGGPDARLGTGSDRYGMYVAFNAFDQNLIISGALTAIASGMCALGPAVCAVAQVAALLASNAIGGGGGIRCGTKSLRVYPVSHHAPRCA
>NZ_CP027869.1|WP_137766091.1|42120_43236_-|Gfo/Idh/MocA-family-oxidoreductase
MSRVGVGVIGAGNISDQYLTNLTQFADVEVLMVADLILERAAAQAEKYGVPSSGTVEELLARDDISIVVNITIPAEHAKVGQQIIAAGKHTWSEKPVATTAEDAQALLTAAEAAGVRYATAPDTVLGAGIQTAIRAIARGDIGTPLTATTMFHVPGPDQWHPDPEFLYAEGAGPLFDIGPYYVTTLLHAFGSASRVQAVSSKSRETRVIGSGPRAGTEFAVEVPTHHAALISFADGQSAQTTLSFQHALPRNGFVEINGSEGTIVLPDPNVFDGDSTLWTLGKDEPTTLQHKGSTWGRGTGVVEMARAIAEGRPERASGAVASHALDVMLGIRDAAESGQAVDIASRITKPEPLPEDFDPAAAVLSASVDA
>NZ_CP027869.1|WP_137768591.1|43232_44018_-|sugar-phosphate-isomerase/epimerase
MQLYSLRDAIAEDLDKAIARVREIGYENVEPYAFVERAADLEKAFAATGLQAPSGHVAVIDAEDTAPIWDAAERLGITTVIDPFIPTDRWQTADDVAKIAERVNELTAEASARGLQFGYHNHQWEFTNKVDGRTVYDLFVEQLSPETVLEVDTFWATVGGADAPAVLKALGDRVVAIHVKDGKVDGDILTALPSSESALVVPEALQRAFENQTPAGQGDVDVRGILAAAPQAIRVVEFDAYSGDVFQGITESLAWLKDNDK
>NZ_CP027869.1|WP_137766092.1|44284_45580_+|MFS-transporter
MSTPEPGSPALLNPEEGITQPVSTVKVGIGYQVALFLGQFGLFVALMAPVYVSMQIKAQALVGDDAANVIGSVLPIGAFGALIMNPLAGALSDRTRTRWGRRRPWLLGGVVVFAIALAWIAYAPDVLNLTLGWLLAQLAANATLATLLASFADNVPQLQRGRASSIIALAQNIAVLAGTYLSVFFVANLPVLFIAPGILAIVLVVVYALVARDELPTYKLKRFTWINLISSFWTNPIKNPDFAFAWWSRFLIILATFMFTTYRLLYMQEHLGIESLEEATSAVAFGVLLYTLALLVSAALSGWASDRIGRRKVFVGGSTALFAVGLVILAHADTVTGFYVAEVVMGFAYGIYSAIDTALVVDVLPNADRPGKDLGVINIANALPQSLAPAISLFFLKIGSDHPDNYALMCWAAGIVALLGALVVIPIKRVR
>NZ_CP027869.1|WP_137766093.1|45701_47024_+|carboxylesterase-family-protein
MRSTDTRSFDTSAGTIEAVVDGDVTRALGIPYAQADRFAPPVPQPPSTAPFRADTPAPVPPQPSATFVDQLLPSMDHLRVDEHCQRLSITAPSDVRHDERLPVMVWVHGGSYVLGGGDLPIHDAHDLVTEQRVVVVTVTYRLGVLGFLGDGETVPANLGLLDLVEAFRWVQRNIAAFGGDPDSVTAFGQSAGADAIAHLMISEGARGLFRRAIVQSAPLGLSRGRARMNRAMVRAVGAVAADTPLDEVLERQARATRAGGRYGLAGGMPFGTQYGFAPLPAERDTDRAWRSVAPDVDVLIGSGSDEAGMYVPLVPGLRTVARWRPLRSLLRWLLVRPLSEVIYGRDARRFAERHRDAGGRATVYRLLRHPSVAPVGAVHMSDLPLLLGGRSAWVGSRFVPERDWPVVERRGRALRAIWADFARTGRVRAADDETLVFDRG
>NZ_CP027869.1|WP_137766094.1|47099_48344_-|monooxygenase
MTDTTTAQPGTRLPDAPADYETLAGRFRPIFDRIAAGASEREQDHRLPFDEIRELAAAGFGAVRVPVAFGGAGATLPQLFRLLTELAAADSNIPQALRGHFALVEDRLVARSGERDAWLERFSRGEIAGNSWTEVGAVQIGDVITKVTPQDDGTFRISGQKYYSTGSIFADWIDTYAERTDTGERVIAIVDAHQPGVAHSDDWDGFGQRTTGSGTSTFTDAVVQADAVVLFDDRFKYQTAFYQAVLLTVLAGSVLAAEREIALQVRNRNRVFSHGNADTFAQDPQILQVVGEVSAAGFAATAIVDRAAEALQAAYEGAALDEAEDERRNDRAELATAQAQVALTSLATTATSHLFDALAASGVSTTKNLDRHWRNARTAGSHNPWVFKARIIGDHAVNGVEPPRVWAIGATRRG
>NZ_CP027869.1|WP_137766095.1|48486_49125_-|AmiS/UreI-transporter
MAYICLVLSGAALLINGLTLLGRVPGRDSGVFNVLIGGVQLVLCTAVAVTADGSLSVLLSIAGTFLFGLTYLYVGLDALAGLGSTGLGWFCGLVAAIAVVFAVTNVTADPVLAVLWATWAGLWTLFFLLLALGRDIGRYTAWALVLASQTTTTVPALLGLAGRWPAGPAWTAGAALVAVVVFVGAAVLSRRGGRRALPATAQPPVVAPTAAA
>NZ_CP027869.1|WP_137766096.1|49286_49871_+|TetR/AcrR-family-transcriptional-regulator
MPDADLRARIVAGAADAFRDGDFHAVGPDDVARAADVPVADVHRVFPSWELLVVAVVDRWAKVGRDALRGVAEQEGAVAYLRARLDRGQQHPATVRVRIALLSATSTPGHPASGWFRQQYTTLFEDVTLALARDVVAGREPRGAAPRHAAEQLVALFEGLQLQAMLRDDADLLPGWDRAVARMRAGWAAAAVTA

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Crispr_ID: NZ_CP027869_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_3

946025-946154

Orphan

Consensus_repeat	Method
GGCGGGTGCCGTGCGTGCGGTGGTGGGCGGGCGGAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_3

>merge|NZ_CP027869|3|946025-946154|CRISPRCasFinder
GGCGGGTGCCGTGCGTGCGGTGGTGGGCGGGCGGAACCCGCGCCTACGGGTCGGGTGGTGTTGCCGTTTCCGCCCGCTCGCGCGGTGTGGTCGGCGGGTGCCGGGCGTGCGGTGGTGGGCGGGCGGAACC

>NZ_CP027869|3|3|946025-946154|CRISPRCasFinder
GGCGGGTGCCGTGCGTGCGGTGGTGGGCGGGCGGAACC	CGCGCCTACGGGTCGGGTGGTGTTGCCGTTTCCGCCCGCTCGCGCGGTGTGGTC
GGCGGGTGCCGGGCGTGCGGTGGTGGGCGGGCGGAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137766765.1\|951345_952191_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|366444
NZ_CP027869.1\|WP_137766757.1\|939989_941495_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP027869.1\|WP_137768663.1\|949670_950213_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370723
NZ_CP027869.1\|WP_137766767.1\|954239_955226_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP027869.1\|WP_137766754.1\|934039_935419_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283837
NZ_CP027869.1\|WP_137766766.1\|952257_954243_+\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|372624
NZ_CP027869.1\|WP_137766756.1\|938442_939990_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP027869.1\|WP_137766768.1\|955212_956895_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|235531
NZ_CP027869.1\|WP_137766769.1\|956993_957923_+\|DUF2236-domain-containing-protein	unknown	unknown	gnl\|CDD\|378343
NZ_CP027869.1\|WP_137766755.1\|935551_937984_+\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223815
NZ_CP027869.1\|WP_137766763.1\|947623_949198_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|223559
NZ_CP027869.1\|WP_137766761.1\|946240_946894_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137766762.1\|946998_947400_+\|DUF3054-domain-containing-protein	unknown	unknown	gnl\|CDD\|378616
NZ_CP027869.1\|WP_137766758.1\|941611_942697_+\|type-III-polyketide-synthase	unknown	unknown	gnl\|CDD\|238427
NZ_CP027869.1\|WP_137766764.1\|950272_951349_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|130256
NZ_CP027869.1\|WP_058728900.1\|938146_938446_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP027869.1\|WP_137768661.1\|931527_933837_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP027869.1\|WP_137768662.1\|942756_943440_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|180466
NZ_CP027869.1\|WP_137766760.1\|944710_945757_+\|DUF3097-domain-containing-protein	unknown	unknown	gnl\|CDD\|378628
NZ_CP027869.1\|WP_137766759.1\|943674_944727_-\|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176247

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137766765.1\|951345_952191_+\|ABC-transporter-permease	gnl\|CDD\|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	1.17865e-16
NZ_CP027869.1\|WP_137766757.1\|939989_941495_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP027869.1\|WP_137768663.1\|949670_950213_+\|hypothetical-protein	gnl\|CDD\|370723	pfam09849, DUF2076, Uncharacterized protein conserved in bacteria (DUF2076). This domain, found in various hypothetical prokaryotic proteins, has no known function. The domain, however, is found in various periplasmic ligand-binding sensor proteins.	5.12913e-06
NZ_CP027869.1\|WP_137766767.1\|954239_955226_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.95027e-17
NZ_CP027869.1\|WP_137766754.1\|934039_935419_+\|hypothetical-protein	gnl\|CDD\|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	4.39819e-18
NZ_CP027869.1\|WP_137766756.1\|938442_939990_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP027869.1\|WP_137766768.1\|955212_956895_-\|AMP-binding-protein	gnl\|CDD\|235531	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP027869.1\|WP_137766769.1\|956993_957923_+\|DUF2236-domain-containing-protein	gnl\|CDD\|378343	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236). This domain, found in various hypothetical bacterial proteins, has no known function. This family contains a highly conserved arginine and histidine that may be active site residues for an as yet unknown catalytic activity.	7.85808e-42
NZ_CP027869.1\|WP_137766755.1\|935551_937984_+\|penicillin-binding-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	1.73564e-103
NZ_CP027869.1\|WP_137766763.1\|947623_949198_+\|inositol-monophosphatase	gnl\|CDD\|223559	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism].	7.38913e-51
NZ_CP027869.1\|WP_137766766.1\|952257_954243_+\|amino-acid-transporter	gnl\|CDD\|372624	pfam13520, AA_permease_2, Amino acid permease.	4.32105e-10
NZ_CP027869.1\|WP_137766762.1\|946998_947400_+\|DUF3054-domain-containing-protein	gnl\|CDD\|378616	pfam11255, DUF3054, Protein of unknown function (DUF3054). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.47125e-20
NZ_CP027869.1\|WP_137766758.1\|941611_942697_+\|type-III-polyketide-synthase	gnl\|CDD\|238427	cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.	1.77785e-100
NZ_CP027869.1\|WP_137766764.1\|950272_951349_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|130256	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	9.88112e-110
NZ_CP027869.1\|WP_058728900.1\|938146_938446_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	5.92351e-33
NZ_CP027869.1\|WP_137768661.1\|931527_933837_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP027869.1\|WP_137768662.1\|942756_943440_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|180466	PRK06202, PRK06202, hypothetical protein; Provisional.	6.99111e-84
NZ_CP027869.1\|WP_137766760.1\|944710_945757_+\|DUF3097-domain-containing-protein	gnl\|CDD\|378628	pfam11296, DUF3097, Protein of unknown function (DUF3097). This family of proteins with unknown function appears to be restricted to Actinobacteria.	1.12713e-138
NZ_CP027869.1\|WP_137766759.1\|943674_944727_-\|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176247	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0

>NZ_CP027869.1|WP_137766760.1|944710_945757_+|DUF3097-domain-containing-protein
MTVARTVWPSDRGGGRGAYRDAPGCRRRCGTRRHYASRVDEDRYGSDVLSGDWRSKGVKKVRQVPLERDMVLEDPDSGWAGAVVGLEAGNVSLEDWKGRTRAFPFTGQFLLEGELVTLGRPQAPVGRSAAAAPPARSVGTDGRPGAAPAVRHASDGGRLRTASGSFAVEQQRARVALPSRIMVEGKHDAELVEKVWGADLRVEGVVVEELSGVDNLADVLEEFRPTRDRRVGVLVDHLVPGSKESRFADAVMRGKWGAHVLVVGHPFVDVWQSVKPERLGLRAWPTIPRSIEWKKGILQHLGWPADDQADVARAWQRILGQVRTFADLEPQLLGRVEELIDFVTEPEA
>NZ_CP027869.1|WP_137766759.1|943674_944727_-|zinc-dependent-alcohol-dehydrogenase-family-protein
MRATVIHAPRDIRVEERDTPVLIDPTDAVVKVTASCVCGSDLWPYRGVRGTEQAHTIGHEFVGVVESVGAVVTDLAVGDFVIAPFTTNDGTCQACTHGMTSGCEHSSIFGGTTDAYGHPIGGAQSEYVRVPDAAATLVKVPGPVDDDLVPSLLTLSDVFSTGHHAAVSAEVGPGKTVVVVGDGAVGLSAVLAASRLGAERIIAMSRHADRQALAREFGATDIVETRGDEGIAAVRELLGGELADCALEAVGTAESMDQALRVVRPGGNVGYVGVPAGDPELPMPFLFAKNITVGGGMAPARAYIEELLPDVLSRTIEPGKVFDLELPLDQAAEAYAAMDERRAIKVLLRP
>NZ_CP027869.1|WP_137768662.1|942756_943440_+|methyltransferase-domain-containing-protein
MDLRARDTALQELMDDPGCDPRVLDRTFRRFAVVNALVSGWRAVWRTHVVPALPPSGRARVLDLGCGGGDLARSLVRWAGSDGFSLEVVGVDPDERAITAARRSTARGVTFRQASSADLVAAGERFDVVVSNHVLHHLNDDARAGFLADSERLATGRSLHSDIRRSRQAYRAYALASPLVSAGTFVRVDGLRSIRRSFTVPELQEVLPVGWTAERAAPHRVLAVRDA
>NZ_CP027869.1|WP_137766758.1|941611_942697_+|type-III-polyketide-synthase
MTATIRAIGTAVPDTTLDQGAVRDLFAGQPDLGRLGARIVPAAFDASAVEHRHTVIEELDASRPGGLFRQGTGALVSPSTGTRNDRYGELAPALFVAAARDAVERAGIAPDRVTHLVTVSCTGFTQPGPDIDVVDQLGLPAGVFRHHIGFMGCCAAFPALRIAAAFAEADPDAVVLVVCAELCTLHVRASDDPDQIVANSVFGDGAAAAVVTSGGSGLRIERFATATVPEGASEMAWNIGDEGFEMVLSTAVPKLVGVHVPAAVTALLGEGETFADLPVWAVHPGGRAILDRAQDALALPDGAVASSRAVLRDHGNMSSATVLFVLRDAVEQGLAPGSPVAAVAFGPGLTVESARLTAVEA
>NZ_CP027869.1|WP_137766757.1|939989_941495_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MAQKDALMDFDEALERFEPVLGFEVHVELATKTKMFSDAPNFFGGEPNTNVTPVDLGLPGSLPVVNEQAVRYSIQLGLALGCSIAESSRFARKNYYYPDNPKNYQISQYDEPIAFEGEVEVELADGTIFQVPIERAHMEEDAGKLTHVGGATGRIQGAEYSLVDYNRAGVPLVEIVTKPIFGAKDRAPELGAAYVQVIRDLVRALGVSEARMERGNLRCDANISLRPWGQEELGTRTETKNVNSFRAVERAIRYEIQRQAAILAAGGAITQETRHWHEDTGRTSAGRPKSDADDYRYFPEPDLLPVVPDPAVVEELRASLPEAPVARRRRLKGEWGFSDLEFQDVVNGGLLDEVEATVAAGASSQAARKWWTGEISRVANAQDTTPGDLVSPQHVAETIALVESGDLTDRLARQVLEGVIAGEGSPAQVVEARGLKVVSDDSALTAAVDQALAAQPDVLAKIRDGKVQAAGAVIGAVMKAMQGQADAARVRELVLERAQQS
>NZ_CP027869.1|WP_137766756.1|938442_939990_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTDDLTRLSAAALADALVARDVSSVEATQAHLDRIAAVDGDVHAFLHVNENALAAAKSIDSRRAAGDDLGALAGVPIAIKDVLCTQDMPTTSGSKILEGWRPPYDATPVAKLRAAGLVPLGKTNMDEFAMGSTTEFSAYGPTRNPWDLDRIPGGSGGGSAAAVAAHEAPFALGSDTGGSIRQPGAVTGTVGVKPTYGGVSRYGAIALASSLDQIGPVSRTVLDAALLHDVIGGHDPKDSTSIPDAWPSMAAAAREGLQADTLRGLKVGIVKELAGGEGFQAGVTQRFQETVAILEQAGAEVVEIDAPSFAYAISAYYLILPAEASSNLAKFDSVRFGLRVTPEGGATVEDVMAATREAGFGPEVKRRIILGTYALSAGYYDAYYGSAQKVRTLVQRDFAAAFDQVDLLISPSAPTTAFPLGERLDDPLSMYLNDLTTIPANLAGVPGMSIPNGLAPEDSLPTGVQLMAPQREDARLYRYGAALERLLEQQWGRPLIDSIPDLDQSQQSAAQEGVI
>NZ_CP027869.1|WP_058728900.1|938146_938446_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MPDITSEQVAHLANLARIALTPDEIEKLTGELSHIVESVAKVAEVATDDVPATSHPVPLGNVTRPDVVGQTLTQEQALSGAPDSDGERFRVTAILGEEQ
>NZ_CP027869.1|WP_137766755.1|935551_937984_+|penicillin-binding-protein
MRAMRWTGALTTFVAMSGLAGLLVAVAVTPAVAVAGEGASGAVSFFEDLPSYLDIQTPQQVSSVYATKDGQQVKIASFYAENRTDVASNAMADSLKRAAIDTEDPRFEDEGGIDVLGTVRGVAATVVGGDVQGGSSITQQYVKNVLVQQCEQLTGSDAAATKAKIAACYQDAAGVTPQRKLQEMRYAIAVDKKYTKDQVLTGYLNLVGLGGRVYGAEAGAEYYFGVHAKDLSLPQSATLVAILNNPANLRIDEPDDKDNGAANGYAATKARRDYVLQRMYVHHDISKAQLDQAKATPITPHVTDTANGCSAAASAYDAGYFCDYVRDQVLQDPAFGKTAAERIETLDTKGLEIHTSLDLDLQAQAQSALSSYVPTTMAGVDLGGTNVTVEPGTGRVLSMVQNTTYTQSDNAGPGATAIDYNADTAYGNSGGFQTGSTYKVFTLAEWLASGHTLSESVPTGEHLFQQSEFTNSCEALGGSPWPVSNAEAVPASMSVQAATSESINTAFGAMAKQLDLCKIKDLAQAMGIHQADGSAPASNPASVLGTNPLSPIDLAEAYAGFANGGVVCTPTVIDSVREADGTTITPSPSSCTRGVSAEVAGTVDYALQGVLTGSGTAASANPGDATPKFAKTGTTDADTQNWLVTSSTKYTNATWIGNVTGLVGLANVSFPHGTTGYSAKFGVGRSMMSWLDQRYGGGTLPEPDPAMIGSAPRSTGGTASGAATGGDPSAPGTSAQGQPAQGQPAQGQPAQGQAAQGSSGTGTTAGTPAQGGAAGSGSQPGTGTGGTSTGTGGAQGTSAGGTTQQPPAHG
>NZ_CP027869.1|WP_137766754.1|934039_935419_+|hypothetical-protein
MLLIAAALLLTASMHSMGVVEAPAVPGPEPQGARTVSQVVLREVPSAPVGAHAVDVDALAAARGTAFLDALGTAGPDDLVRADSDEQVLATAQDRPPTAVSVARWWGALGAAAQERLVAFAPAVVGNLDGVPYDVRDRANRSTLDDELADDAGRTTARTALLEQVRDALRQELGEGPRHLVVLDTRDTGRAAIAVGDLTSARDVTVVVPGMFFTVTGQMHDFTDTASDLYDEQTAVSALAATRTGRVAEDASTEGTAVLAWMGYRTPDMSNILSLGLARTGADRLERLVDGLDAVRGADRPRLNVVAHSYGSTTALMALASGRVQADSLTVFGSPGSDVRSAADLAVRTGQVYVGDAHSDPIAGSGYFGTDPGSAGFGSTLLDLSADTVATDAGVFRRPVGHNDYLKPGTASLHDVALIGIGRGDLVRHQARRGQGGGGSAQSMPDMYLLRPQDLHPRD
>NZ_CP027869.1|WP_137768661.1|931527_933837_+|NAD-dependent-DNA-ligase-LigA
MAPADLDAAQAQREVDRLRVRVNELRDQYYEGNGSTVSDGEYDAMVRRLDAIEQRFPDLLTPDSPTQTVGGQAQTVQFAPVEHAERMLSLDNVFSPEELTEWADKVQRDAGSERVRFLTELKIDGLAINLRYEHGRLVSAATRGDGVVGEDVTGNVRTMGTIPDRLSGEGHPAIVEVRGEIFFPVAQFDELNARQREAGERVFANPRNAAAGSLRQKEEGKSEAKRALMVDRLRRLRMLVHGIGAWPVRELERDTEVHSQSEVYELLQTWGLPTSSHYRVFDTVDEVLGFVRSTGERRASVEHQIDGVVVKVDDLALHEELGSTSRAPRWAIAYKYPPEEVHTKLLDIVVSVGRTGRATPFAVMQPAEVAGSVVRQATLHNQDVVKAKGVLICDTVVLRKAGDVIPEVLGPVVELRDGSEREFVMPAACPECGTPLAPAKEGDKDLRCPNARSCPAQVRGRVEHIASRGSLDIEGLGEVAAAALTQPLHPEQPPLVTEAGLFDLTMEDIVPIEVIVRDAETGMEKSDDDGTPKRVTPFSRARKKTDPPFDPDARGAEYTGEPSRYPSKNAFEMLANIEAAKTKPLWRIMVGLSIRHVGPVAARALANHFGSLDRIRNASREELAAVDGVGGIIADALLDWFAVDWHREIIDRWTAAGVQFTTPDHPGPGAAVEGGVLSGVTVVATGSLEGYTREGAQEAIIAAGGKAASSVSKKTDFVAAGPGAGSKLTKAEQLGLRIIDAEQFRLLVTEGPGALGTDQADEAEPSDAD
>NZ_CP027869.1|WP_137766761.1|946240_946894_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MDGIDGRVRSAVDVWLRWLPRWQIGTARPRTRICRKCTGSPIASAAGFGPDVPHAVQHALIGRISTIVEDAVDEYTAKNLPLLQRELERAAARKRHAGYQPTEGLSPEFQGLDVDPEPSPGEPFLFTLDEMTGTGAGEQTPREPLSDEAKAALRHEIALSDECARATGTAVCLALVEHRPRIAEAVERLVEPQIATLVSDMFRGFDGPEEAGRPGLF
>NZ_CP027869.1|WP_137766762.1|946998_947400_+|DUF3054-domain-containing-protein
MTRTWGWIAAVVDIVLIVVFALIGRSSHAEATSFAGTWTTAYPFLAGWLVGWLVVLGWRRPLRVWPTGVVVWVATVAIGMLLRVLTGQGDVAGDPLPLSFVIVATIVLAVFLLGWRLVAGLVLRAGRRGRGRA
>NZ_CP027869.1|WP_137766763.1|947623_949198_+|inositol-monophosphatase
MTTLDHATVGPDPDGRAARALPRLVARRGAPRVRREDTLPSIAVAEALGADVVEVDVRRTADGVAVLLHDETLGRLWGDPRRVAEVSWCEVARLGNGLDRIPRLDAVLERLDGCRASLLLHVVDPADALVAIRTVAASTWDTTVAWTGTPPVLAAVRAALPTADTWLPWESLDVPTAADTTGLRPSTLVLDDVFLTPDTVTAAHDLGIAVAVRTVDEPGPVRWAARTGADLVATEDVASARAVLAGGERDGWALSERAPTEEEVGVRAQALAHRIAHEAIAFTREHPIGQVTTKRGDGDPVTDVDRAVERLVRSRVRAAFPTHGFTGEEYGTAPGDRHHWWLDPVDGTTNLVNGVPWTAMSLCLTRGGQPLVGVVADPWRGEVLEARRGRGAALRDAPLRLDDAPRALAGSVVGAEFGGQGARDGLGRLVAALAERSCAVRVMGSSTLTLAQVAAGRGVGGCVPSFDPVDHGAAVLLVHEAGGVVLTLDGPVDGFPRAGEPLLVAHPGAADELFAIWSTALGAR
>NZ_CP027869.1|WP_137768663.1|949670_950213_+|hypothetical-protein
MLRTAPPERIEEVHAEAFATLSPEQRRMVYEEFTRSAPDGEAPRGDDPRSLAQAATRSEIRQPGFMERSLGGMNGGAGAMGQRGGPSFGRMIGASILGTVAGYVIGSAIMSAFLPDPGSFDGGTDAAGDGASEDTGADSGDGGASDAGAADGGGYENAGWDDGGGDFGGGFGDFGGDFDV
>NZ_CP027869.1|WP_137766764.1|950272_951349_+|ATP-binding-cassette-domain-containing-protein
MAIIEASGLTKTYRSRSGPVHALAGLDLSVPEGTVTALLGPNGAGKTTTVKVLTTLVTPDAGRATIDGIDVVADPQATRRSIGVSGQYAAVDENLTGAENLEMIGRLYHLGRRAARQRARELIEVFDLSEAGDRPVKGFSGGMRRRIDLAGALVTNPRVLFLDEPTTGLDPRSRLTLWGIIEGLVGDGATVLLTTQYLEEADQLADDIAVIDDGRVIAEGTADQLKAQVGGHRVVVTLVDGDDREAVVTALRRYGVGDVETSADGRTAGIAVEAGPQALQRVLADLGEAGIRLHDAGMRRPTLDDVFLRLTGHAATAGDEDAPDGGGGAGAGRASRPGRHDPVPAAGDASDTTPERVR
>NZ_CP027869.1|WP_137766765.1|951345_952191_+|ABC-transporter-permease
MTAVGAPRQQLPVVVTSPLAIWFEDGWTVTKRNLTKIKRSPDMLVFAVLQPIMFVLLFSQVYGGAIQVRGTDYTQFLMAGIFAQTVVFGATFSGSAMAQDLKEGLIDRFRTLPMSASAVLVGRTNSDLVLNAISMVIMMLTGLAVGWRVGSAPHEFLAGVGLLLLFSYAFSWVMALLGMSVRTPEVINNASFMVLFPLTFISNAFVPSETMPLVLRVFAEWNPVSSLVQAARELFGNAGSAPVPDVWTMQHPVATVLVGIAVMLVVFVPLAVRKYTRISAG
>NZ_CP027869.1|WP_137766766.1|952257_954243_+|amino-acid-transporter
MTATEAERAAQGGASGRPSDRSVRLRRWMLHGADQGASHQGPHQVEVEKTHSWWRVMCLTGVDYFSTLGYQPAIAALAAGLLSPIATIVLVLVTLFGALPVYRRVAQDSFKGAGSIMMLEKLLPWWAGKLFVLVLLGFAVTDFMITMTLSAADATAHIAENPFTPHWFTDIPVPLTLALLLLLGVVFLRGFREAIGIAVGLVAVYLTLNAVVVGVALWHVFERPVVVDDWWTGLTTQHSNPLVMIGIALVVFPKLALGLSGFETGVAVMPQVRGDAADGTSARPEGRIRGTRRLLTTAAIIMSSFLITSSIATTFLIPQREFQPGGQANGRALAFLAHEYLGNVFGSVYDFSTVAILWFAGASAMAGLLNLVPRFLPRYGMAPQWARATRPLVIIFTLIAFAITILFEANVDAQGGAYATGVLVLITSAAFAVTLSARRKQQRKRMVAFGVITVVFVYTTVANIIERPDGVRIAAVFIVAIVVVSLVSRVRRSFELRASSIELDAVARQFIEADADQFSSVCIIANEPGAGTAEAYRSKGREERRDSGIPARVPTMFLEVLPADSSDFEEDLVVEGHVVHGHRVLRVRSGNVPNTIASTLLAVRDIAGVVPSIYFEWNEGSPIQNALRFVFTGVGDVAPVTREVLREAEPDVHRRPTVHVS
>NZ_CP027869.1|WP_137766767.1|954239_955226_+|EamA-family-transporter
MTDAAAAGRARRPVGGPVAVLVAAAVWGTTGTATHFAPGVPAFVFGAVTFGLGGLVFAATTGRAALRAVAGPGPRRWVLLGAASLVVYAVAFYAALADAGVALGTTVAIGSSPVFAGLVEWVADGRRVTGRWVVATLVSVVGMIVVTLARSEAPGSGSLPLGLGAALLAGLTYATYSLAVARGMHVASRPVPAPLPLPDTVPGSATGASGRGVVGAVFGLAAVPLVVLAVVAGGDVLVVGTNWPVFVYLALVPTVLGHSLYAVGLRRVSASVATLLSLFEPVVAAVLAVLVVGEHLGAAGWVGIGLVVAGLALLALPVPRRGFLPTSP
>NZ_CP027869.1|WP_137766768.1|955212_956895_-|AMP-binding-protein
MSIDTPRPWLASYAPGVPHDIDEPTGSLSDIVEQSADRFPGKVALEFFGRTTSYADLQEQILRAANGLRKLGVGAGDRVAIVLPNCPQHVVAFYAVLRLGAIVVEHNPLYTARELRHQFEDHGAKVAIAWDKSVATLQDFPADLRLDAIVSVDLTRAMPRATRLALALPVAKARESRAKLTTSVRGTTKWDDLVSTRKLSKRHPRPATTDVALIQYTSGTTGVPKGAVLSHRNLLANAAQARAWVPTIRRGDNTVYAVLPMFHAYGLTLCLTFAMSMASRLVLFPAFDPALVLKAMKKHPPTFLPAVPPIYTRLQHAADSAKVSLRGIEIGISGAMPLSQDVVEPWEARTGGYLVEGYGLSECSPVLMANPVSTERRLGAIGLPLSSTEARVVDPDDPTKVLGTGEAGELQVKGPQVFRGYWGKAEATDDVFTPDGWFRTGDVVSIDADGFVSIVDRLKELIITGGFNVSPSEVEDALLKHPSVREVAVVGITQGGNEQVVAAVVPKDPGTFDAEALRAWSRDQLAAYKVPRRIVVVEDLPRSMIGKVLRRKVRDQITAK
>NZ_CP027869.1|WP_137766769.1|956993_957923_+|DUF2236-domain-containing-protein
MASVSDAFRSRLNDTFTNGATERPAWIDELEQGSDAGFFGPGSATWAVHGGNHTVLAGVRALLVQALHPGALAGVADHSRYREDPFGRLAGTIRWIYTVSHGDTQQATHASQWVRKLHERVVGEYVDGHGVTKPYAANDPDLARWVHLAFTDAFLRSAQVWGKPIPGGADAYVREWAVAGRLMGVEDAPESDAELRAQMNGYLDRGELKADARTHDVVRFIKDPPLARLLRPGYRALFDGAVASLDPRHRSMLGLRTPGVGPVQLPVRQVAGVVLDGIGAVLGTTPGTERAALVRIARLEQESRQDLTA

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Crispr_ID: NZ_CP027869_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_4

1016926-1017029

Orphan

Consensus_repeat	Method
CGGGCGATTGACGGCGCGGCCGCGCGGCACCGAACCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_4

>merge|NZ_CP027869|4|1016926-1017029|CRISPRCasFinder
CGGGCGATTGACGGCGCGGCCGCGCGGCACCGAACCCGTCGTGGTGTTCCGGGTGGCTGGGCGTGTCGGGCGATCGACGGCGCGGCCGCGCGGCACCGAACCCG

>NZ_CP027869|4|4|1016926-1017029|CRISPRCasFinder
CGGGCGATTGACGGCGCGGCCGCGCGGCACCGAACCCG	TCGTGGTGTTCCGGGTGGCTGGGCGTGT
CGGGCGATCGACGGCGCGGCCGCGCGGCACCGAACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137766807.1\|1012379_1013864_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238625
NZ_CP027869.1\|WP_137766806.1\|1011440_1012370_+\|Fpg/Nei-family-DNA-glycosylase	unknown	unknown	gnl\|CDD\|223344
NZ_CP027869.1\|WP_137766817.1\|1023141_1024437_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP027869.1\|WP_137766813.1\|1019727_1020390_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP027869.1\|WP_137766815.1\|1021606_1021930_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137766814.1\|1020416_1021304_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|227339
NZ_CP027869.1\|WP_137766816.1\|1021978_1023037_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP027869.1\|WP_137766810.1\|1016001_1016628_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137766818.1\|1024436_1025315_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP027869.1\|WP_137766820.1\|1026306_1027662_+\|cellulase-family-glycosylhydrolase	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768669.1\|1009027_1009657_+\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|376526
NZ_CP027869.1\|WP_137766819.1\|1025311_1026307_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP027869.1\|WP_137766803.1\|1009743_1010271_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP027869.1\|WP_137766804.1\|1010269_1010923_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP027869.1\|WP_137766811.1\|1017121_1017955_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP027869.1\|WP_137766812.1\|1018098_1019667_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP027869.1\|WP_137766809.1\|1014547_1015954_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP027869.1\|WP_137766805.1\|1010933_1011422_+\|ribose-5-phosphate-isomerase	unknown	unknown	gnl\|CDD\|235509
NZ_CP027869.1\|WP_137766808.1\|1013860_1014514_-\|FMN-binding-negative-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377290
NZ_CP027869.1\|WP_137766802.1\|1006311_1008891_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|274121

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137766807.1\|1012379_1013864_-\|amidohydrolase-family-protein	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	1.12846e-83
NZ_CP027869.1\|WP_137766806.1\|1011440_1012370_+\|Fpg/Nei-family-DNA-glycosylase	gnl\|CDD\|223344	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair].	2.73281e-52
NZ_CP027869.1\|WP_137766817.1\|1023141_1024437_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.51301e-60
NZ_CP027869.1\|WP_137766813.1\|1019727_1020390_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.55458e-42
NZ_CP027869.1\|WP_137766814.1\|1020416_1021304_+\|EamA-family-transporter	gnl\|CDD\|227339	COG5006, rhtA, Threonine/homoserine efflux transporter [Amino acid transport and metabolism].	1.4055e-65
NZ_CP027869.1\|WP_137766816.1\|1021978_1023037_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	9.11093e-76
NZ_CP027869.1\|WP_137766818.1\|1024436_1025315_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	8.03103e-72
NZ_CP027869.1\|WP_137768669.1\|1009027_1009657_+\|DsbA-family-protein	gnl\|CDD\|376526	pfam01323, DSBA, DSBA-like thioredoxin domain. This family contains a diverse set of proteins with a thioredoxin-like structure pfam00085. This family also includes 2-hydroxychromene-2-carboxylate (HCCA) isomerase enzymes catalyze one step in prokaryotic polyaromatic hydrocarbon (PAH) catabolic pathways. This family also contains members with functions other than HCCA isomerisation, such as Kappa family GSTs, whose similarity to HCCA isomerases was not previously recognized. Some members have been annotated as dioxygenases, dehydrogenases, or putative glycerol-3-phosphate transfer proteins, but are most likely HCCA isomerase enzymes.	1.7396e-06
NZ_CP027869.1\|WP_137766819.1\|1025311_1026307_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.79061e-80
NZ_CP027869.1\|WP_137766803.1\|1009743_1010271_-\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	1.96902e-55
NZ_CP027869.1\|WP_137766804.1\|1010269_1010923_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.31249e-15
NZ_CP027869.1\|WP_137766811.1\|1017121_1017955_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	1.76485e-05
NZ_CP027869.1\|WP_137766812.1\|1018098_1019667_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.95457e-42
NZ_CP027869.1\|WP_137766809.1\|1014547_1015954_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.43794e-49
NZ_CP027869.1\|WP_137766805.1\|1010933_1011422_+\|ribose-5-phosphate-isomerase	gnl\|CDD\|235509	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional.	2.39201e-72
NZ_CP027869.1\|WP_137766808.1\|1013860_1014514_-\|FMN-binding-negative-transcriptional-regulator	gnl\|CDD\|377290	pfam04299, FMN_bind_2, Putative FMN-binding domain. In Bacillus subtilis, family member PAI 2/ORF-2 was found to be essential for growth. The SUPERFAMILY database finds that this domain is related to FMN-binding domains, suggesting this protein is also FMN-binding.	1.84514e-52
NZ_CP027869.1\|WP_137766802.1\|1006311_1008891_-\|aminopeptidase-N	gnl\|CDD\|274121	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type. This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).	0

>NZ_CP027869.1|WP_137766810.1|1016001_1016628_-|hypothetical-protein
MQSRTQEGLAVGGAVLAALLPALAGASRALPVSPVDVSVRALVVGAAVSGVAALVVLGLGVRWRAPVRSAVALSALALAVSWFVPGVFVVVLVAVAQAALLAAGVLARRAHRPGQERPGQERSEQAPSAHRALGLVLAALAALWFVALLATSSVPLGTDSQAVLLTWFAAPNAFQAAAYLVAVVLVARPVWTGIGRGVRHLRETAEVR
>NZ_CP027869.1|WP_137766809.1|1014547_1015954_+|serine-hydrolase
MEKRAAYESVLPYVREWIDYKVWQLRLPGVQVAIGFEDEVLFSEAWGYADVEAGRRLTTTDLFRIASHSKTFTATALLQLADAGALRLDDTVGSFVPALVEAGSPIADATVRELMEMGAGVVRDGADGDHWALDHPFPDADQLVALVVEGGAKVPVGSAFNYSNLGYGLLGLVIEAVTGTTYAEHVRSAIVEPLGLTGTGPEFDPAREGEFVVGYTSLHAARTRQRVPHVTTGALAAATGFHGTASDLVRYFSAHVPGRGSLLSDHAKRLAQRKAWSALDTDPAARGYGAGFIVDRIGGREVRGHSGGFPGQITQTVFDPASSLVVSVLTSSATGPAGMLATGIVHLLDAAADEQAPGPELPEGVDTSRYTGRFTTFEGITDVARVGARLLAIDPTQPVPTESPVRLRVVDEDTLVMAAGNRFGSVDERITYTRDDSGRAVSFRGDSGMTHRPWSVPEETPEVAAALV
>NZ_CP027869.1|WP_137766808.1|1013860_1014514_-|FMN-binding-negative-transcriptional-regulator
MRHTPHFLMTDVDEVRRLIDGHPWATIVSHTAAGLVASHYPFLLEAPGPDDDPDQIVLVSHVGRPDEVAHELGQHEVLVVFQGPHGYVSPAWYPPEQFVPTWNHVTAHCWGTPEILSDDENFRVLGELVDHFERVMQEPVSLEVDEDTARRMAKGTVGIRIRVARFDARAKLSQNKAPEVVERIVAGLRGDGPYASPALADAVERAQVARTVGREAS
>NZ_CP027869.1|WP_137766807.1|1012379_1013864_-|amidohydrolase-family-protein
MTDLLLRTVRRVGTSGAPCDVRVVGGRIEAVAPAGTLDPAPGADADVDVVETDGAWLGPGLVDHHVHFDQWALVRRRVDVSACTSAEATADALAAVARTGVADLVLVGHGYRDGTWPRPARRELLDGAAPGLPVVVISADLHAVWCNALALAHCSALLGRPLDAGDDGVLREQDAFDVTAVLSRVPDDVLDGWVAEAVDAAAARGVTRVVDLEMVFGLDRWTRRVHAGTDGLRVDSGVYPGELDVAIARGLRTGDVVDGTRGLVRMGPFKVITDGSLGTRTAAMTSGEGVLAYPFADLVAMVRRAVDAGLVPAVHAIGDRANTLALDVFEAVGARGSIEHAQLLVDTDVDRFARLGVAASVQPEHAMDDRDIADRYWADVTDRAFPFGSLHRAGAELRLGSDAPVAPLDPWVSMAAAVGRDRDGRAPWQPAERLSALTAWRGSTEGGRVGVAVGDVADLVLLAADPLAVADSAALRHTEVLGTAIAGRFTHRDL
>NZ_CP027869.1|WP_137766806.1|1011440_1012370_+|Fpg/Nei-family-DNA-glycosylase
MPEGHSVHRIANQFSRHFVGKRCEVSSPQGRFAAGAARLDGKRMVAARAVAKQMFLEFEDDLFLRVHLGLYGAWDFAGVISSAEALSEDGDGEESLSSIGAPRLARYRMAEQEKAEDPIESFPPDPVGQVRVRILTEDTVADLRGPTACVVEDPAGVQRALDKLGPDPINDDGPEAEQTFVDNVRKRNVAIGQLLMDQAVVAGIGNIYRAELLFRQRIDPYKPGKKITVKQAKALWQDWSKLLHAGVRDGLMLTMDDLSEADHAKALRSRKDRHWVYHRQGEPCRVCGTEIRMADMAGRKLYWCPKDQK
>NZ_CP027869.1|WP_137766805.1|1010933_1011422_+|ribose-5-phosphate-isomerase
MRIHLGTDHAGLEFTKTLAQHLTEAGHEVVDHGPTEYDALDDYPSFCINAAHAVVQDQRAGVQALGVVFGGSGNGEQIAANKVEGIRAALVWNESTALLARQHNDANVISIGARQHTEDEAIHFVDLFIAEPFSGEERHARRIAQLAEYETTGHIAGRQIDE
>NZ_CP027869.1|WP_137766804.1|1010269_1010923_+|helix-turn-helix-transcriptional-regulator
MSQIVDDSAAAVEPGVEHPDDADQRRLGERLQRLRTERKWSLTELAEESGVSRAMINRVERGVSSPTATILGRLSGAFGLTISQLLDEALEHDVPRATDPDQARGVQRGATADSWTDPETGYRRRPVSSADFPADVTEVRLPAGEQVAYPASAYAFLRHCIWVVDGVLEVVVGGEPTRLGAGDRIELGEPADVVYRNPGTEPVRYVVVVVRAARGRE
>NZ_CP027869.1|WP_137766803.1|1009743_1010271_-|N-acetyltransferase
MATAYATDEASPVTVRDCEPRDLDVVHALHVDAVLHSTAIWQEEPHPREYFDAWLAERRAAGLPVLVAEVDGTVAGYVTYSAFRPHQGYRHTVEHSVYVVPAFRGRGIATVLMDALVAHARAAGVHVVMAGICSSNTGSIALHERLGFTTVGVLPEVGRKFDRWLDLTLMRLPLS
>NZ_CP027869.1|WP_137768669.1|1009027_1009657_+|DsbA-family-protein
MDNTETARTAVEFWFDPNCPWAWMTSRWVGEVERQRPIDVTWRVMSLFVLNEDQDIPDEYRERIHKGQVYPRIVTAALLRHGQEIVKPLYDALGEHVHHRQESDPDQVVPAVLRELDLDEDLLEYAWTDEVDQAVRASHQDGIDRVGQDVGTPVIAVEGTAFFGPVISPAPKGQEALDLWDGVVAVAKYPGFFELKRSRTVGPIFDTVA
>NZ_CP027869.1|WP_137766802.1|1006311_1008891_-|aminopeptidase-N
MPGENLTRTEAQERAAIVDVQTYDVELDLTRGAETFGSTTRVRFTATAGASTFIDAITKTVHSITLNGTALDVAAVNDGVRIQLDDLQEQNELVVVADAMYTNTGEGLHRFVDPVDDEVYLYSQFEVPDSRRMFAVFEQPDLKAEFTFTVTAPARWQVVSNSPTPEPHVDGEVATWSFTPTAKISSYITALVAGPYEVVRDELTSRDGRTIPLGVFARRSLAEYLDPEYVFETTKKGFAYYEEKFDVPYPFEKYDQLFVPEFNAGAMENAGCVTFTETYVFRSKVTDAIKERRVVTILHELAHMWFGDLVTMKWWNDLWLNESFAEWASTIATAEATEWTEAWTTFQAMEKSWAYRQDQLPSTHPIVATINDLEDVQVNFDGITYAKGGSVLKQLVAWVGIDAFFAGVSQYFKKHHHGNTELRDLLVELEATSGRDLSEWSGLWLETAGVNTLRPEIEVDESGVINSFAVLQEAPADHPTLRPHRLAIGVYGFATDESAPFGADTASAGGKLERTHRVEIDVDGARTEVPELVGVHRGDLVLLNDDDLAYAKIRLDEQSRRTAIEHLAAIANPLARSIVWGAMWDATRDAESPASDYVRLVLGNIATETESTTIRTTLSQLLLTARSYVAPAKVDATVRTVGDTLWQLASSAEAGSDAQFQFVKFFAQIASTPEHVATLQGLRDGSVTLQGLEIDTDLRWELLEGLVLAGAAGDAEVDAELAADKTASGEQAAARARATIPTAEGKLAAFSSLVDSSEAPNAIVRQTTVGFQHTNSPVVLEGLVSKYFDVLTRIWAERSYHMADTIVTGLYPAPLASVELRDAANAWLEAHPETPALRRIVTENLAGTERALRVQAADA
>NZ_CP027869.1|WP_137766811.1|1017121_1017955_-|helix-turn-helix-domain-containing-protein
MDALACLLDTVGLDVRDGRAIVSATPDWTLDLGPSDGYVWVASRATTVWVWSGPDHEVVRAGSALLVRAAAPIAIGTSPDRHEPPDGSPTDPFDATGVHLGTARFGTLAAEALDLPDVLRTRPRDALSDDVLRTLGHLDSLTAARRASAHRDALARTIVLTVLRDEQPPFLADGSIARCIDTLFAAEPSRTTGDVVSATMRCSRRTAERRFRESTGRTPDELRRWYRSLQVRQALLDGADEHEVAHRFAFAGVGSLRRALARARPPITADALDPLAS
>NZ_CP027869.1|WP_137766812.1|1018098_1019667_+|sensor-histidine-kinase
MTDTDRLDQAQTVPLDDHAADRAQTVPLDGAVPQGATKPMPEQPRTPASGPSGASSGWSATPTPGAPATGAPAAGAPTSGGTGSGMTAGRFYREAWRRLPRDFGYMALTAVLLCTLYAAFPAALFGRGLRDLFNPFVLLMFFIALFVARWLGQFEKLRIGWADPRPIRPVDWTPRWQQNWWTRTGSAVANPHYWLYLLHAAVVYPLASLVTVGAGVVLLAGFAWPFVVAVAWGFLGVGGMYLPSSDSGALLAIGLLGLLSMAASVALLPLWARGAVLAHYWIDLGLLGGFRAEQLEQRVAGLQASRAGAVTAEGQALRQIERDLHDGPQQRLVRLRMDLAAAERALDRDPEKAKQLIGEATEHAQDALDELRALSRGFAPPILLDRGLVAALEALVARTPIPVGLDVRLPEGLELATEIQRNVYFTVSELLTNTTKHAGASTAGVYLGLIVDASGLWYLTVSVTDDGRGGARPQEGHGIEGLMGRMRALDGELVVNSPEGGPTEATARIPLGALNGVPVARG
>NZ_CP027869.1|WP_137766813.1|1019727_1020390_+|response-regulator-transcription-factor
MSDGPGAARIRAVVVDDAVLLREGLARVLDEAGIDVVGQYADADSFLATLPHHAPDVVVMDVRMPPTFTDEGVRAAVETRRVAPCTGVLLLSQYVEATYAEDVLAAGATGIGYLLKDRVTRLEEIDDAVRRIAAGGTVLDPEVVTQLMGRRRDPLAALTPREREVLGLMAEGRTNAAIARALVIGTGAVEKHVSSIFGKLALEDTGEDHRRVLAVLAYLG
>NZ_CP027869.1|WP_137766814.1|1020416_1021304_+|EamA-family-transporter
MTRVPAPLLALTAMLSVQIGAALAKTRFDEVGSVGAAALRLVIGALVLVLVVRPRVRHWTRAQWTAAVLLGLALGGMNVFIYVAFASIPIGVAVTIEFLGPLALSLAHTRRWRDVTWAALALAGVVLLGVGPAAVTAVGGVVAAIAAAACWAGYIVMNRRVGAAIPGVDGLAVSMVVAMLVSLPTGLRPAVAGVAQDPSLLLVFAGVALLSTVLPYALEMLALRRMPTRVFGVLQSLGPAIAALAGLVVLHEGLATQEVVALACVSVASIGVTLSARRGRARPDAGRTGGAGQVP
>NZ_CP027869.1|WP_137766815.1|1021606_1021930_-|hypothetical-protein
MGRRRENRWQPPEHPEVERPRAYSLSEDARGPDVCHAVTPAPVWAWVQFPTFHIRVKGFAKSWTRDAVLVEWAQFGQQADAWVWRSAVKHRTLRADRADRHPGNAPH
>NZ_CP027869.1|WP_137766816.1|1021978_1023037_-|LacI-family-transcriptional-regulator
MQPHRRTTIADIAARAGVSISAVSFALNDRPGVSPETRRRIQEIARELDWQPHTAARALGGARAGSIGFVLNRPARTLGTESFFGDLISGIQLGLAGTHVGMTLLVARDAEEELQTYRDWWRGHRVDGVVVIDPRRHDDRLSLLAELGMPAVIVGSHPSPEGTAPSVWIDDSDATETVLRYLHALGHRRLAHVAGPPEFEHTAMRTARVRTFTEAEGLEQPITVPTDYSAEAGARATRTLLSGPDRPTAIVYDNDVLAVAGLGVASEMGVAVPGAVSLVSFDDSAMVRLVRPTITSLTRDTVELGQRAAVLLREQIDVGAVLPSRPGPALTLSVRDSTGRVSTRPPRGRRAH
>NZ_CP027869.1|WP_137766817.1|1023141_1024437_+|sugar-ABC-transporter-substrate-binding-protein
MRTTPRPTRGRAAALLATAAATALVLTGCSSGSSGATGGGNGKVEGTITLQTWALTPTYTDYLQGVIDGFEKEHPDAKVKLQDQPGDGYADKVLSQASSNSLPDVINLPPDIALPLAKRGFLQDVSKDDSGLAKTYVAGALDSYKYKGLDGTYGYPWYLNTDVDYWNSDMFAKCGLDANDPPKTTDELFTQAKTMHENCPDDYLMSRKPGLGDFTLAGVKVLNADGTEFTFADSSKAADLIDRYKTAYQDGYMPSNVLNSDYLGNSTLFTQGKVAWTTGGATSLADFEKNNPSLKGKVTVSPALDTPPLYVQGLSVSSKSKHLATAEAFAQYMTNAENQEAFAHQVNIFPSTVSSQSDPYFSKDDGTVNGKARVLANEALKEAKVLNPVEANSAMTDFLDQQIALAMKGQVSPEKALQTAQDKMNSLLANG
>NZ_CP027869.1|WP_137766818.1|1024436_1025315_+|sugar-ABC-transporter-permease
MRANRWFTPWLLVLPALVWLLAFSLWPSINTVRLSFTNASPLGGVSQWVGVRNFQTLLGDPQVWEALLNSVIYMAVCLPLLTIGPLLIAVLVQQKLPGIAFFRTAYYTPVIASAVVVGLIWTWILDDRGVVNEMAQALGIVQGAVPFLTDRWLLLFSAISLTVWKGLGYYMIIFLAALGNVGKDLHEAAALDGAGAVRRFWSVTMPGVRGTMTLVGILVCVSALRVFSELYILTNGTGGPGGQDNSLVMLIQQYARGFTGNLGYASALSLLLFVVTLVPMLALARMNSKADK
>NZ_CP027869.1|WP_137766819.1|1025311_1026307_+|carbohydrate-ABC-transporter-permease
MTNTTDTTEPVIGGAAGVAAPTPDVTGATDAGRASRPNGRDGRDGRDGRKRRRRVWGVMSTREKVVRYVLLVVVLFITIGPFLWQLSTSLKGAGEDIYTANPSFIPTEPTIENYLKVAAAIPVWRYIGNSLLVAAIDVFGNIVFATLAGFALARLQWRFRKVVLGLFLATLVLPGEATIISQFVTIKDLGLADNLVGVALPGMIAALNVLLMFNAFRQIPEEIDQAAVVDGANAVQRLRYISLPAVQGTIAVIAIFSFIGAWDDFLWPLIVLQSPENLTLTVGLQYLQGTFATDQRMIAAGTMIAFIPIAVIFAVLQRFFFKGVEEGGVKG
>NZ_CP027869.1|WP_137766820.1|1026306_1027662_+|cellulase-family-glycosylhydrolase
MRFGVNHTPSVGWFHSWLDFSPSDTARDMEQIASLGADHVRVFPLWPVVQPNRTLIRRAALDDVATVVDIAGSFGLDVNVDALQGHLSSFDFVPSWLDSWHRRNMFTDPEVVASTAAYVEALAAAVADKPNLLGISIGNEVNQFAHAPHPAPHDTTAAQGHAWAAAMVAAARRGLSAGREARSTSAQTVATGAGSRPTPLVTVAQYDAAWYDDAQPFGPEHAADHGDATVTHSWVFNGAAALHGALGAGSVRHGEYLLQLAAAWNRAPARPNWLQEVGAPTNVVDPADAAAFTERTIRHVAGAQDLLGVTWWCSHDVSRTLADFPELEYDLGLFTNDGRLKPAGEAFAALARSGLPAPAAPPSTAVVLDDVLPDGSPRYGVRADCAPGGRFAAAWLACAESSADGRGPQVVLRSRLSDTAHTVARGIRSTVEVPDDLAGTALSVAHPATMP

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Crispr_ID: NZ_CP027869_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_5

1225838-1225990

Orphan

Consensus_repeat	Method
GCGGACGGGAGGCGCGGGGCGGGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP027869_5

>merge|NZ_CP027869|5|1225838-1225990|CRISPRCasFinder
TCGGCAGGGTGGTGCGGTGCGGGCATCCGTTCGAGCGTAGGCGGAAGTGTCGGCCGGTGTTCCGGAGGCGACCGCGAGGCGGACGGGAGGCGCGGGGCGGGCCGGCAGCGTGCCTCCCGGCCGGCACGTGCGGACGGGAGGCACGGGGCGGGC

>NZ_CP027869|5|5|1225838-1225990|CRISPRCasFinder
TCGGCAGGGTGGTGCGGTGCGGGC	ATCCGTTCGAGCGTAGGCGGAAGTGTCGGCCGGTGTTCCGGAGGCGACCGCGAG
GCGGACGGGAGGCGCGGGGCGGGC	CGGCAGCGTGCCTCCCGGCCGGCACGT
GCGGACGGGAGGCACGGGGCGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137766960.1\|1230299_1230890_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137766950.1\|1219435_1220062_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP027869.1\|WP_137766957.1\|1227702_1228635_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
NZ_CP027869.1\|WP_137766949.1\|1212247_1213492_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|184689
NZ_CP027869.1\|WP_137766953.1\|1222122_1222968_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP027869.1\|WP_137766947.1\|1210204_1211077_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP027869.1\|WP_137768682.1\|1229774_1230185_-\|very-short-patch-repair-endonuclease	unknown	unknown	gnl\|CDD\|238136
NZ_CP027869.1\|WP_137766945.1\|1207763_1208477_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP027869.1\|WP_137766956.1\|1227204_1227627_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225060
NZ_CP027869.1\|WP_137766946.1\|1209044_1210094_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP027869.1\|WP_137766952.1\|1221310_1222126_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP027869.1\|WP_137766961.1\|1231202_1231589_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768683.1\|1230958_1231162_+\|DUF1653-domain-containing-protein	unknown	unknown	gnl\|CDD\|377930
NZ_CP027869.1\|WP_137766955.1\|1226883_1227189_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137766948.1\|1211204_1212206_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP027869.1\|WP_137766959.1\|1229210_1229648_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP027869.1\|WP_137766958.1\|1228734_1229214_-\|DUF4395-domain-containing-protein	unknown	unknown	gnl\|CDD\|379566
NZ_CP027869.1\|WP_137766951.1\|1220058_1221258_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP027869.1\|WP_137766944.1\|1206859_1207753_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379468
NZ_CP027869.1\|WP_137766954.1\|1226048_1226891_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137766950.1\|1219435_1220062_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.65271e-71
NZ_CP027869.1\|WP_137766957.1\|1227702_1228635_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	3.49636e-79
NZ_CP027869.1\|WP_137766949.1\|1212247_1213492_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|184689	PRK14459, PRK14459, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_CP027869.1\|WP_137766953.1\|1222122_1222968_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.94115e-81
NZ_CP027869.1\|WP_137766947.1\|1210204_1211077_+\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	4.18364e-22
NZ_CP027869.1\|WP_137768682.1\|1229774_1230185_-\|very-short-patch-repair-endonuclease	gnl\|CDD\|238136	cd00221, Vsr, Very Short Patch Repair (Vsr) Endonuclease. Endonucleases in DNA repair that recognize damaged DNA and cleave the phosphodiester backbone. Vsr endonucleases have a common endonuclease topology that has been tailored for recognition of TG mismatches.	9.61145e-27
NZ_CP027869.1\|WP_137766945.1\|1207763_1208477_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.23174e-16
NZ_CP027869.1\|WP_137766956.1\|1227204_1227627_+\|hypothetical-protein	gnl\|CDD\|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	0.00624769
NZ_CP027869.1\|WP_137766946.1\|1209044_1210094_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	4.94793e-17
NZ_CP027869.1\|WP_137766952.1\|1221310_1222126_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	4.98562e-20
NZ_CP027869.1\|WP_137768683.1\|1230958_1231162_+\|DUF1653-domain-containing-protein	gnl\|CDD\|377930	pfam07866, DUF1653, Protein of unknown function (DUF1653). This is a family of hypothetical bacterial proteins of unknown function.	1.09147e-24
NZ_CP027869.1\|WP_137766958.1\|1228734_1229214_-\|DUF4395-domain-containing-protein	gnl\|CDD\|379566	pfam14340, DUF4395, Domain of unknown function (DUF4395). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 142 and 168 amino acids in length. There are two completely conserved C residues that may be functionally important.	1.39624e-30
NZ_CP027869.1\|WP_137766948.1\|1211204_1212206_+\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	2.78466e-21
NZ_CP027869.1\|WP_137766959.1\|1229210_1229648_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	4.83519e-10
NZ_CP027869.1\|WP_137766951.1\|1220058_1221258_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	8.13677e-46
NZ_CP027869.1\|WP_137766944.1\|1206859_1207753_-\|hypothetical-protein	gnl\|CDD\|379468	pfam14100, PmoA, Methane oxygenase PmoA. This family is a putative methane oxygenase.	3.58232e-51

>NZ_CP027869.1|WP_137766953.1|1222122_1222968_-|ABC-transporter-ATP-binding-protein
MSTSPAVTVEHLTKQYPDGKRAVDDISFTIEQGETFALLGPNGAGKSTTVEILEGFRSRTGGEVRVLGHDPAHASRSHNARVGIVLQTSAESPNVTVAEQLQHFRHLYPRSRPVDELLAATGLEAQRNTRISRLSGGQRRRVDVALGIIGRPEVLFLDEPTTGFDPEARGQFWQLIRSVRDEGTSVLLTTHYLDEAAHLADRAAVLAGGRLLDVAPIDAIGGPDARTPIVRWQDDTGARHERRTPDPTTLVRSTTAPMHALEVVRPSLEDVYLTMISEHAA
>NZ_CP027869.1|WP_137766952.1|1221310_1222126_-|ABC-transporter-permease
MNPAPGIRLGAHRIAYELRSYFRAPDSVFFTFLFPIVMLALFSVAFSSAADIQAGPGVSVDYATYYLPGLVATGFLLSGTQSLGVDIAGERSDGTLKRLGGTPLPVVSYFVGKIGMVLVTSIVQTALLLLVAGVVFGVDLPTDGGAWARFAGLVLLGVATASVLGIAISALPREGRRATATIVPVVLVLQFISGVYLPFTQLPDWLQTVASVFPLRWMASGMRSVFLPGAFASAEPGGAWHLGLGTLVLAAWLVLGTVACLLTFRWNRRDG
>NZ_CP027869.1|WP_137766951.1|1220058_1221258_-|sensor-histidine-kinase
MDRITRHRNWGLHVAVAVAVALVSVIAATDWSPWPSRWPAFVALGLLALAYVTYGWRGYDEPRAAAAFVPLLVVVALVLPAVVPSTAFIQSVLFPVAWCQVERIRTAVWVSVAIGIASGVGLQIASGPDALGGTVLIEAISVLGACALGLWIFRIARLSDERRRLIEQLEATQHSLAEANRAAGVTSERARLARELHDTVAQDLAGIVMLTERARGDLTGDRLDRLHDRLAVLEESARTALEESRTLVAAGAAGVASDGLGAALHRLGERFGRETGTPVRVEASDCALDRDAQVVLLRVAQEALANVRAHAAASSVQVVLQVEDGRAALRVADDGAGFDPTLPTAGHGLRGLRERLALAGGTCTITSDAGGGTVVTVDLPTGAEPRLPAVTSAPTEVTR
>NZ_CP027869.1|WP_137766950.1|1219435_1220062_-|response-regulator-transcription-factor
MIRVVVADDHPIVRAGIVALLQDADDVQVVGQASDGEGAVATALAERPDVVLMDLRMPGCTGDEATARILAREPDIRVLILTTYESDDQILAAIEAGASGYLLKAAPESEILAGLRATARGETALAPSAAAALVRRTTAKVPLGPALSPRELEVLQLVAQGNSNPAIGRALFVSETTVKTHLGHVFEKLGVNDRTRAVTRAMELGILR
>NZ_CP027869.1|WP_137766949.1|1212247_1213492_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MATETRTPFEEQRSARPQVRPRTEGWTQAQDSEGRPLLQFASPKRGKPPVHLADMTVEERVEKVKELGLPGFRAKQLSTHYFTHYSSDPATMTDLPAAQREELVAGMLPPLLTETRRLATDKGDTIKFLWKLHDGALVESVLMRYPGRITLCVSSQAGCGMNCPFCATGQAGLTRNMSTAEIVEQIVRANAAIAAGELGGDPRKGGQDRVDAERVTNIVFMGMGEPLANYKRVIEAVRTMIAPQPHGLGMSARGITVSTVGLVPAIKKLADEDIPLTFALSLHAPDDELRDELIPVNSRWKADEAIDAAYEYYAKTGRRVSIEYALIKDMNDHAWRADLLAEKLNARGKGWVHVNPIPLNPTPGSVWTSSEPHVQDEFVRRLNAAGVPTTLRDTRGKEIDGACGQLAAADETDV
>NZ_CP027869.1|WP_137766948.1|1211204_1212206_+|C40-family-peptidase
MGRHALPAAPDGSTSTAHEAVAPAPTRTAATPTGPAVAAPAVADTAAPRRPRGRRAALGPAVARSSFVQPAKPARTVALATPRPVASTAVAGAAVLSRSAALRAERAADPRHVRRAANAKRAAILLAPAIAVTSSLTLAVPANAAPQATSHGTSSSSIAAYDAQSFTVARDVEVPVVQTDGMTTTTTIVSYPTIVTKYGVTTQQAEAAISKVLSAGGKRATIVSTALQYMGDPYVEGGASHSGIDCSGLTMVAYAAVGIPLVHYVPSQDAVATTIPQSEALPGDLVVFDNEDHVGIYLGDGVVLQAPHPGDPVDIVPVYPNAHHFARLLPAGE
>NZ_CP027869.1|WP_137766947.1|1210204_1211077_+|alpha/beta-hydrolase
MQRTSPSTGTGGIAVAVRGTGAPVLVLHGTPGGIAAAEAMARFLPSDRFRVVTLARPGYAGTTLEPDQPSLDDEADRYAALLDELGIDRVAVLAWSGGGPTAYRFAVRHPDRVSALVVVAGLSARWVPPAPSFAEWLVTYTRAGAALAAFAARLLPSVVVRTAEAGVSSLRGRALTAHVTDVLHDRPRRRVLLDLSSSGNAGGRNRPGWDNDVRVLGAVDDLELGAVRVPTLLVHGDADTEVPMEHSARAAAAVPDVELVTLPGGTHFGLWDHHEAAAVQARVRDHLARS
>NZ_CP027869.1|WP_137766946.1|1209044_1210094_+|AraC-family-transcriptional-regulator
MITATQDPPAEDRTIEQRRTSVRQVVHSGTEPGEARALHEGVYDGRDLWSRPDGDTPFSYRYRSTGDGRVSLRTSSVSAHHGGVLAPGRQYLLAWSVEGGIVLDPDREDGVTLRPGVPVMCPAGRPFTVAAPPGTVHLVHFDADFVEAVAVVGGTAAPVPLAFPIAVPTARLAPLQRTLRELAAPMLDVDVVDGPRAALDLRLAEAVLEAFRPDPDGGVPDVPVATLERAKAYMYAHFARPLSAAEIAAAAETSVRTLQETFQRQEESTPTTYLRDLRLEKARLALQFADARETTVAAVATSCGFRHMGRFAGAYAARFGEPPGETLRGQRRMIAVAGTPGRTRWSHAG
>NZ_CP027869.1|WP_137766945.1|1207763_1208477_-|class-I-SAM-dependent-methyltransferase
MHAHDEPDHSHSAASSNDSPEVGTAREWWEARYAERDGIWSGRVNAVLADVVAGLPVGGGRALDLGCGEGGDVVWLAEQGWTVTGVDLSRTAVERGERAAQAAGVAERTRFVAADLATWAPDAEERFDLVTASFLQSWPVEIPRAAILHRATAAVAPGGHLLVTAHAAPPHGDLPEEMRAYRFPTPEQDLAALQLDDGWDVVVAEGRLRSSTGPDGERHETVDSVVLVRRRPGQVGA
>NZ_CP027869.1|WP_137766944.1|1206859_1207753_-|hypothetical-protein
MGTDGPAGVGGTRRALGSLEVAGVQVGEVLDGMDLPRAWAPRPFVHPVRTLGGVVLTDRGPDDHAWHSGLGIALPDVDGVNCWGGPTYVPGAGYRWQDDHGVATVESGSWSVASGSGSVASASVASASVECGASDRSRLRVGIVWRSPGGDPLLQEDRTLAWGPALEGWQLEWTSSFRAAGGRRVVLGSPGSHGRTGAGYGGWFLRFARCTDVVVRTPDGSGEDQVHGSVAPSVSWTGSFDGGRARVLVEALDHRDPWFVRVAEYPAIGSALAWDAPTVVTPDEPLVRSFRVTVSDV
>NZ_CP027869.1|WP_137766954.1|1226048_1226891_+|hypothetical-protein
MVDDVAWSPPRRRNGIWWIVASGLLLPAGWVAWLLVALAGYNGAGMSTHSLAGQTIGSAVVTVVCVGVPLAGLVLLLVQRRRDRAVTLVGPVGCAVFVVLAAVSLGYPTVRIGQAWAEEEEQRAQPLTPRETSRTQAEAEQDLADVGERAVRAMGGDPESGDVVQFPRGCPLSNLEQGTEYTWRWSFPADADAADEPQTEAERKADLLPQDQAEGRLAPVREVFLDAGLRDADPLGWDIRVVGDDWLAEGNAGVTRTSGDVMVETTCLAGGPGDGYDEDE
>NZ_CP027869.1|WP_137766955.1|1226883_1227189_+|hypothetical-protein
MSEHVTVGPGARRASVGAWVALVVAAGCTVYEVLAGALVEWTGLGFVPLLFVPPLYIAAILLLIWVGQQGFRVLRTLAIVVGIVLAVSLPVAVVVAVRTWS
>NZ_CP027869.1|WP_137766956.1|1227204_1227627_+|hypothetical-protein
MTTDNSGTRGEGQPGDVGQSGSEAQPGEAQPGGEDLASTGWIAGSIVSLLIGWSLALASILSTSGPSSSQWPDGGRLLLGVIAVLMGVGVPALGLLRVRRQERLGRPTGDAVPAVCAVVMLLGVCTLLPMLVLQFAQVVS
>NZ_CP027869.1|WP_137766957.1|1227702_1228635_+|NADP-dependent-oxidoreductase
MKVVGVETFGGPEALAVHEVPEPHAGPGTVRIKVQAFAVNPTDTGVREGQRDSSEASPPYVPGMDAAGVIDEVGPDVHDWQVGDQVMAIALPLSEHGGAYVEHLVAPLGSFTRIPAGLSIEEAATIPMNGLTALQILARADLAEGDTLAVTGAAGLLGNYVVQLAEKRGITVIADAAPKDEDLVRSLGPYHMVRRGDGFAAAVRGIEHDGVDALADAAVQRDEVVDAVRDGGFFADVRGWEGNGARGIRFERIMVFSEYTSFDLLEELRQAVEDGVLTPRVAEVLPASRAAEAHERLAAGGTRGRFVLTW
>NZ_CP027869.1|WP_137766958.1|1228734_1229214_-|DUF4395-domain-containing-protein
MTTTNDTARGIDPRSPRFGAAITTVLLAATIVLTLVPATWPVGIVLLAVIVVLFGVGGIAGIRRHPYGAIFRRFVRPRLGPPAELEAPEPPTFAQRVGLVITALALVLAMVGVPYAAPVGAAIALVAAFLNAVFDVCIGCLMYVWLVRVGLFRSGRPAA
>NZ_CP027869.1|WP_137766959.1|1229210_1229648_-|thioredoxin-family-protein
MTVGAAIAVLVGVLALATVLGLVLRRQTGRARSTAALGADDLAAAEDYGTTATLVQFSTPTCARCPATRRQLDVLTDRHTGVRRIEVDLAERPDLAERFDVMQTPTVLLLDAQRTVRTRFGGPPRPAELTAALDSVLTADSPETR
>NZ_CP027869.1|WP_137768682.1|1229774_1230185_-|very-short-patch-repair-endonuclease
MARFGRRDTAPELAVRRELHRRGRRFFVDRQVSRRCRVRPDLVFPRARVAVFVDGCFWHLCEEHTHLPKANAELRRRKLLANRLRDARNQAILTAEGWRVVRSWEHDDPATVADQVEHELDRWSAIVTGHPGRRRS
>NZ_CP027869.1|WP_137766960.1|1230299_1230890_-|hypothetical-protein
MDPRLPGAVRRAARRATWVGVVGAVVGAAIGIWLSLGERPDEVLFLVVGGTSAVGGLEAAMTIVIAQFRMRSMTSAPTAALTVAEKRAVQGAILSRASIAPDLEPRAAAQARVLAATLPLAMAQFVLLYFGIIGSQVIGLASADPLNWFRIVLIAVLAVTGVIAFVVLRRNLARVRRFLGTLDTDATKDSVSSPAH
>NZ_CP027869.1|WP_137768683.1|1230958_1231162_+|DUF1653-domain-containing-protein
MAPGRYRHFKGGEYEVVLVAKDVETEEPVVVYQALYGERGHWVRALADFTAYVSRDGYEGPRFVHLV
>NZ_CP027869.1|WP_137766961.1|1231202_1231589_-|hypothetical-protein
MTPDQVRRESLAIVEKLRALDAAALPELRQPTATECGPRSDEGVKFSWSVEGAPPSNPQDYIDRAEVVLKENGYSTHQTTTSLNDGRPLHYLGADGEGRPKIGLGSSALNTVLQLSSDCAEGNASDFG

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Crispr_ID: NZ_CP027869_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_6

1350329-1350429

Orphan

Consensus_repeat	Method
CACGGCGGCACGTCGTGCGACCGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_6

>merge|NZ_CP027869|6|1350329-1350429|CRISPRCasFinder
CACGGCGGCACGTCGTGCGACCGGAACCGCCGCAGGCGGCACGTCGTGCGACCGGAACGGCCGCCGACACGGCGCGCACGGCGGCACGTCGTGCGACCGGA

>NZ_CP027869|6|6|1350329-1350429|CRISPRCasFinder
CACGGCGGCACGTCGTGCGACCGGA	ACCGCCGCAGGCGGCACGTCGTGCGACCGGAACGGCCGCCGACACGGCGCG
CACGGCGGCACGTCGTGCGACCGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137767041.1\|1355813_1356212_+\|DUF3040-domain-containing-protein	unknown	unknown	gnl\|CDD\|378610
NZ_CP027869.1\|WP_137768691.1\|1344908_1346822_-\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|223953
NZ_CP027869.1\|WP_137767039.1\|1354067_1354433_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375793
NZ_CP027869.1\|WP_058750355.1\|1360914_1362540_+\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	unknown	unknown	gnl\|CDD\|234660
NZ_CP027869.1\|WP_058729214.1\|1346928_1347882_+\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
NZ_CP027869.1\|WP_137767043.1\|1358316_1359081_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP027869.1\|WP_058729211.1\|1342962_1343775_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP027869.1\|WP_137768693.1\|1352617_1353847_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182727
NZ_CP027869.1\|WP_137767036.1\|1340762_1341467_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP027869.1\|WP_137767035.1\|1340283_1340763_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224630
NZ_CP027869.1\|WP_137767038.1\|1350468_1352517_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP027869.1\|WP_137767040.1\|1354568_1355687_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|173833
NZ_CP027869.1\|WP_137767042.1\|1357358_1358315_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	unknown	unknown	gnl\|CDD\|234597
NZ_CP027869.1\|WP_058729212.1\|1344013_1344517_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP027869.1\|WP_058729215.1\|1347924_1348647_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP027869.1\|WP_137767044.1\|1359130_1360900_+\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
NZ_CP027869.1\|WP_058729729.1\|1356818_1357250_+\|division/cell-wall-cluster-transcriptional-repressor-MraZ	unknown	unknown	gnl\|CDD\|234728
NZ_CP027869.1\|WP_137768692.1\|1348834_1350178_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_CP027869.1\|WP_114850857.1\|1341702_1342227_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133380
NZ_CP027869.1\|WP_137767037.1\|1343835_1344045_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137767041.1\|1355813_1356212_+\|DUF3040-domain-containing-protein	gnl\|CDD\|378610	pfam11239, DUF3040, Protein of unknown function (DUF3040). Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed.	9.38086e-23
NZ_CP027869.1\|WP_137768691.1\|1344908_1346822_-\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|223953	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism].	0
NZ_CP027869.1\|WP_137767039.1\|1354067_1354433_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375793	pfam18367, Rv2175c_C, Rv2175c C-terminal domain of unknown function. This is the C-terminal domain of unknown function found in actinomycetes such as M. tuberculosis Rv2175c. Rv2175c has a DNA binding activity and possesses a winged helix-turn-helix fold, furthermore it is identified as a substrate of the PknL kinase.	2.01131e-18
NZ_CP027869.1\|WP_058729214.1\|1346928_1347882_+\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	7.32991e-76
NZ_CP027869.1\|WP_137767043.1\|1358316_1359081_+\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	0.00283439
NZ_CP027869.1\|WP_058729211.1\|1342962_1343775_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.33472e-42
NZ_CP027869.1\|WP_137768693.1\|1352617_1353847_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	1.55739e-15
NZ_CP027869.1\|WP_137767036.1\|1340762_1341467_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.12688e-15
NZ_CP027869.1\|WP_137767035.1\|1340283_1340763_+\|FHA-domain-containing-protein	gnl\|CDD\|224630	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms].	3.48414e-20
NZ_CP027869.1\|WP_137767038.1\|1350468_1352517_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.9468e-117
NZ_CP027869.1\|WP_137767040.1\|1354568_1355687_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	4.14998e-64
NZ_CP027869.1\|WP_137767042.1\|1357358_1358315_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	gnl\|CDD\|234597	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH.	1.84468e-140
NZ_CP027869.1\|WP_058729212.1\|1344013_1344517_+\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	1.16178e-48
NZ_CP027869.1\|WP_058729215.1\|1347924_1348647_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.06721e-51
NZ_CP027869.1\|WP_137767044.1\|1359130_1360900_+\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	9.29811e-119
NZ_CP027869.1\|WP_058729729.1\|1356818_1357250_+\|division/cell-wall-cluster-transcriptional-repressor-MraZ	gnl\|CDD\|234728	PRK00326, PRK00326, transcriptional regulator MraZ.	4.6513e-58
NZ_CP027869.1\|WP_137768692.1\|1348834_1350178_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP027869.1\|WP_114850857.1\|1341702_1342227_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.14462e-15
NZ_CP027869.1\|WP_058750355.1\|1360914_1362540_+\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	gnl\|CDD\|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	2.09012e-135

>NZ_CP027869.1|WP_137768692.1|1348834_1350178_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MIEGLDHWRTLPIKQQPTWPDRAAAEAASAEIATLPPLVFAGEVDKLRERLAAAAQGRAFLLQGGDCAETFAGATADSIRDRVKTILQMAVVLTYGASMPVIKMGRMAGQFAKPRSSDFETRGDVTLPAYRGDIVNGYDFTPESRQADPRRLVQGYHTAASTLNLVRAFTQGGFADLRQVHSWNKGFASNPANARYEHLAKEIDRAIRFMDACGADFEALKHTEFYASHEGLLMDYERPMTRIDSRSGLAYDTSGHFIWIGERTRDIDGAHVDFLSRVRNPIGVKLGPTTSVDDMKALVDTLDPEREPGRLTFITRMGAGRIRDELPKLLEAIKGMDANPLWVTDPMHGNGLTTPTGYKTRRFDDVVDEVLGFFEAHRQVGTYPGGMHVELTGDDVTECLGGSEQIDEATLATRYESLCDPRLNHMQSLELAFLVAEELSAHPYQRP
>NZ_CP027869.1|WP_058729215.1|1347924_1348647_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MTYWLLKNFLLGPLILTLFRPWVVGREHVPAKGPVIFASNHISFIDSVILPAVLDRRISFLAKSDYFTGRGLKGWATKTFFNAIGQLPIDRSGGKASEASLHTGLQVLARGEQLGIYPEGTRSPDGKLYRGRTGIARMILEGRVTVVPVAMIGTREVQQIGQKFPKFKRVGVVFGKPLDFSRFEGFETDRFILRSVTDEVMHELAGVSRQEYVDVYATSVKERASSAREQVMKDRRTPTA
>NZ_CP027869.1|WP_058729214.1|1346928_1347882_+|ROK-family-glucokinase
MHAIGIDIGGTKIAGAVVSELGEILAEDRVATNAADPDAMLDDVVTMVTRLRAAHDVGAVGVAAPGFIDASQSIVYYTPNIRWRNEPLRQKLQERLGDLHITVDNDANAAGWAEFRFGAGRLVSDMTMLTIGTGVGGAIVTEDRLFRGGFGTGGEIGHLRIVPNGLPCGCGARGCIEQYGSGRALQRMANDVADAGGIGSALADAREQNGGQLDGKIVGDLILADDPGALAALRRLGRHLGEACASLSAVLDPQLFVFGGGVASAGDRLLEPIKQAYLNNLPARGYHPEPDFVIAELVNDAGVVGAADLARIHARTA
>NZ_CP027869.1|WP_137768691.1|1344908_1346822_-|long-chain-fatty-acid--CoA-ligase
MLAVTSHRRGVLVSNRPTRESTVNDQRQSAPTPAPDHGSAGRLLSERARRTPDRPILAQRHGDTWTTVSAADTLARVRGIAKGFVAAGLEPGAHVAILSRTRMEWTLVDFAVWTAGLVSVPVYETSSPDQVRWILSDSETVAIVVEQEEHARRVAAVAPDLPHLGQHWTIDGGGLDDLVRLGETVTDAELDARTADVHGHDDATIIYTSGTTGRPKGCVLRHDNFTGTVEGATEAMPEVVADGSSTLLFIPMAHVFARFIAVMSISTGVLVGHEPDTRDLMRAVSTFRPTFLLAVPRVFEKIYNSAEQKADLGGKGKVFRAAADVAVAHSEAVADGRVPLGLKLRFALFDKLVYAKLRDAIGGRVQYAISGSAPLSPRLSHFFRSIGVHILEGYGLTETTAPATVNRAHELRIGTVGRALPGVEVRIADDGEILIRGVDVFDRYWHNDEATTKAFADGWFRTGDLGRLDADGVLTVTGRAKELIVTASGKNVAPAPLEDGIREHPLVGQVVVVGEGKPFVAALVTLDREMLPGWCEARGISPALTPRAAAYDERVHAAVQEAVDTANQRVSRAESVRSFTIVDTELTEASGHLTPKLTIKRAVVLRDFAADVEHIYSGSKVQTTATPVVASRRRNRA
>NZ_CP027869.1|WP_058729212.1|1344013_1344517_+|peptide-deformylase
MTVRPIRLFGDPVLRSPADPIAPGALGSQGVRDLVQDLLDTVREPGRAGVAAPQIGVGLRAFSYNVDGEVGYVLNPEVVEVRGEVELMDEGCLSVPGLSYPTPRSPYAKVRGVDVDGAEVVLEGTGLMAEALQHEVDHLDGTVYVMTLDPEVRRGALRDIRAQAWFH
>NZ_CP027869.1|WP_137767037.1|1343835_1344045_+|hypothetical-protein
MSSKISVANRGRIALHASRVAPSSGAVVPEVAVGDAVGRPTLPASPQVDAADLLVVLHQHDRPSHPPVR
>NZ_CP027869.1|WP_058729211.1|1342962_1343775_-|ParA-family-protein
MHVLSVSSLKGGVGKTTVTLGLTSAAFAKGLRTLVVDLDPQSDVSTGLDIDISGHLNVADVLENPKEKIVRQAIAPSGWTKGSQGKVDVLVGSPSAINFDGPHPSIRDIWKLEEALANVEQDYELVLIDCAPSLNALTRTAWAASDRVTVVTEPGLFSVAAADRALRAIEEIRRGLSPRLQPLGIIVNRARVQSLEHQFRIKELRDMFGPLVLSPQLPERTSLQQAQGAAKPLHVWPGESAQEMAKNFDQLLERIMRTGKIGPYAEGGAA
>NZ_CP027869.1|WP_114850857.1|1341702_1342227_+|MerR-family-transcriptional-regulator
MTRYDLGLLFTDGLPEHDEQNGYRGTVAARAAGISYRQLDYWARTELVQPTIRGAAGSGSQRLYGFRDILVLKLVKRLLDTGISLQQIRTAVNQLRESGVSDLAQTTLMSDGASVYLCTSDDEVIDLVSRGQGVFGIAVGKVLREVESSLVELDATPAADPDDELAARRASRAS
>NZ_CP027869.1|WP_137767036.1|1340762_1341467_+|MerR-family-transcriptional-regulator
MAARSAAARAGAAVPDLLTIGQVIARLKPEFPDLSSSKLRFLEERELVTPIRTASGYRKFSAADVERLRIVLGLQRDHYLPLKVIKDYLADLDAGREPVLPGGGDAPKPSILGRERRYTRDETVRAAGASPMLLTDAVSASLLPAADTYGDDAVAVLKALVELQRTGIEPRHLRTMRGVVEREVGLIESALMPVSRRGDATSRAKATELAREIAGQLEVVRSNLVRAAIGRLDA
>NZ_CP027869.1|WP_137767035.1|1340283_1340763_+|FHA-domain-containing-protein
MPEPVAPQPGGQKTPEQRLVDTTLTFSMDMGAALTAESGVSTEEREAINALPSGSALLVVRRGPNVGARFLLDSDVTTAGRHPAADIFLDDVTVSRKHAQFLRHGTAFSVKDNGSLNGTYFDGVRIDEALLTDGAEVQVGKFRLTFYASRVDLARLATA
>NZ_CP027869.1|WP_137767038.1|1350468_1352517_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase
MPPMTTNAATDPMIGRMIDQRYRVRSRIARGGMATVYLATDVRLERRVAIKIMHGHLADDQAFRERFIQEARSAARLSHPNLVGVYDQGAEDDTAYIVMEYIPGITLRDLLQEHRALTPEQATDILRAVLAGLASAHKAGIVHRDLKPENVLLADDGRIKLGDFGLARATTANTATGAALLGTIAYLSPELVTRGAADSRSDIYALGIMLYEMLTGEQPYKGDQPMQIAYQHANDTVPVPSAAEPGVPPELDDLVAWATARDPEDRPRDAREMLDHISGNQQRATGQYRTAVLRPENATAILPAGSAAPSSADTGRRDGGAPDDATRVIASSTGGAPAAPGRRGAPGPRRTGSQPGALSPAGQRLADKSAKRRKRGWIVLAVVVVLAVLAGVIGWALGPGPWGNVRIPEVTGKSVAQARQLLQAQGLEPTARTDSRYDAVVAKGQVSTTKPAAAREVRKGTPVQIVVSDGPRMIALPAIVGQPLSTVTAALDDDFQLQDDQYEFSADAPKDTVIAAKGLGTDGQTVDLASVGEYAERGPVTLTVSLGAVPDVTGKTLDAATAALDEVGLVVGAQQERYSDDVPKGQVVSSSVEDSPAVRGSAVDLVLSKGPTPITLPDVAGKTIDEATSTLENLGLDVEVPECTNVLCRFYDWKSALPVTATDPVKGSTVHRGDTITLSYEQ
>NZ_CP027869.1|WP_137768693.1|1352617_1353847_-|LysM-peptidoglycan-binding-domain-containing-protein
MPIVLAGTIAVTAGLTGPVAHAEPRHDDDAAKKRHVDEDRNVGDRPVFGTAVARPSTTTVTTVASVSKAPTTYTVRQGDTVSGIAARFGLSAQEVLVRNGLGWNTIIHPGQTLHLASAPAAPAAAPASTGATGSYHVKSGDTVSSIAARNGVSTSSVLAANNLSQRALIYPGQTLTIPRAGTTASASAPAAAAPVASTPAAAPAPAAATSVKIATGDTIGAIAAKHGVSVKALLAANGLSYTSTIYAGKTLVLPAATSKPTTTPTGGAVTTAVGSVNGVELTGEQRRNAATIVSVGRTLGVPDRGIVIALAAALQESSLRNLSHGDRDSVGLFQQRPSQGWGTKAALQDPATAAELFYVGNPGKTRGLLGVRGWSSMALTDAAQAVQVSAYPNEYAKWEQTARALLASL
>NZ_CP027869.1|WP_137767039.1|1354067_1354433_+|helix-turn-helix-domain-containing-protein
MGRVSDGPTDDTTLSERWLTVPDLVDLLGVTPGRIHRLFEQKTLLPARVDGVLRVPSEFLDDAEPLPELRGTLIVLGDNGFSDDEAVRWMLSEEPALRTSPIAALRAGRKAEVRRVAQSLL
>NZ_CP027869.1|WP_137767040.1|1354568_1355687_-|polyprenyl-synthetase-family-protein
MAESTRLVDLVSARVGRALDEQRDRLLAISPDLAPFDRYARDLLSGGKRFRALFCYWGWQSVAGRSGSFDPLAEGSRQTTAEAIVTVAAALEIFHAAALVHDDIMDRSDTRRGRPAAHRRFESLHEESGWVGDRALYGTNSALLLGDVLLSLSDAVFDEGLALLDPARARIVRQEFHTMRLDVTAGQYLDVHEETAWPSIDESEHLVRAQRVIVFKSAKYSIEAPLVIGALVAGASEAQLEGLRSFGLPLGVAYQLRDDVLGVFGDPEVTGKPAGDDLREGKRTVLIASARKSLSAGPRQLLDELLGDPDLTEEQVQMLRATLTESGAVAAVERSIDRHVQRAKAALEATPLSPSARGQLLSLADTVSRRVA
>NZ_CP027869.1|WP_137767041.1|1355813_1356212_+|DUF3040-domain-containing-protein
MPLSEQEQRLLEEMERSLYQNDSDFVARVTRRQGRASYTSITLGVLGALVGIAIVVVALVIKQPWLGLPGFIVMLAGVLYALRPGMRMPKSGAKAPKAGKASTGRSQRSSSGGSFMDRMNERWDKRNDPGQQ
>NZ_CP027869.1|WP_058729729.1|1356818_1357250_+|division/cell-wall-cluster-transcriptional-repressor-MraZ
MLLGTHAPKLDEKGRVILPAKFRDELSGGLVMTRGQERCVVVFSADTFEQLHERIRTAPMTSKRTRDYMRLFLSGASAETPDKQNRVTIPQNLREYAGLERDLTVIGSGDRAEIWSTPAWEAYYAEVEEGFADNDEEVIPGIF
>NZ_CP027869.1|WP_137767042.1|1357358_1358315_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH
MAEDQPKFPHTPVMLQRIVDLFVPALDGPDKVVVDATLGMGGHSEALLERFPELTLIGLDRDTDALGIAGERLARFGDRVRLVHTVYDGIVKAVEGEGFDAVDGVLFDLGVSSLQLDRAERGFAYSQDAPLDMRMDRTEGQTAADVLATYDEGELRRIFQRYGEEKLAGRYARAIVDRRAERPFTMSGDLVQVLHDATPVAVQRQGHPAKRVFQALRIEVNAELAVLERAIPAALDVIAVGGRIVVESYQSLEDRLVKRALVERTTSSAPAGLPIELPEHAPTYSLVVKGAELADEAERAANPRAIPVRLRAAERIRK
>NZ_CP027869.1|WP_137767043.1|1358316_1359081_+|hypothetical-protein
MSTNLALVDPVGAPSRAPQPPRRARPELVEVAPSKAQRRARPKVAYAVVGVVALGVLLLAQLGISMVLSQGAYTLDSLGAEQTKLSRTQQSLSEELRVLDSPQNLARNAKALGMIANSTPVYLDPKTGHVYGTPTPAAPDEVTASGDNQVPNALLDPVPLAAGPDASAGKAGATDGGTSAGGAGSTAATGSTSTTDGSATADGTSGTAGSTSTAAGGSSATDAEKSAGASESGRTGSTTDVESDANPLQAPTTR
>NZ_CP027869.1|WP_137767044.1|1359130_1360900_+|penicillin-binding-protein-2
MTKTIRNPRLRYSVVIIAVIALVAVFVIRLVDIQVVQAASLNEASKAKRSIPVTIYGNRGAIVDRNGTELAESVNRYNIVTSPRLVAAFDGKLGGERTKKVSVDDALQALAKASGGDAQAMRKAIQADPKSDFAYLVKGLDVKHYEAVVALGIPWVYKEQQSARVYPMGATGGALTGFMGTDGAQAGLEYSYNQCLAGKNGSETYERGEDGVQLPGSTRTTEQAKDGGTLETTIDSDLQYMAQQTIASAAQSLEAESATATVVDVKTGELLAVADWPTVDPNDVDATTDKGAYGSRALTSTYEPGSTIKAAIAAALIDQGKSSPTDRAVVPYSRSFPWGGKIQDSEFHPTENLTLTGILQNSSNVGITELGERLSQQQRYDYMKKFGLFEPESAIQYPGQPAMQYGASPDWSSQTNINSMFGQGISTTAIQVASVFQTLANQGVRIPLHMVKGCKTADGKLIDAPDVQGTRVVSAAAADQTVKMLQSVVTGGTLVGMKPISGYNIAAKTGTAEVAEGSKGYGGQRITSVAGMAPAEDPQYVVTVTFTKPQTNKWSSGAAPAFRTLMSQVLEKYRVAPSTAEAQLYPSTW
>NZ_CP027869.1|WP_058750355.1|1360914_1362540_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase
MSARIPPVLRPEHPTPRSVAELANAFGMRVVGSVDAVETTGVTLSAAEVQPGDLFVGVHGANRHGAQFATEAAERGAVAVLTDADGVALAEPSGLPVLVVEDPRAALGDVSAWVYRTHPDEATDLPQLFATTGTNGKTSTSYILEGILKQLGLVTGLSSTAERHIGSLSVTSRLTTPEASEMHALLARMRESEVRAVAVEVSAQALSRHRVDGIVFDVAGFTNLSHDHLDDYADMEEYYQAKLPLFQPEHARRGVVSLDTDWGHRVVQDSRIPVTTITVHPEVEAEWHVDIVEAHAAYTEFRLTGPEGRELTTRVPLIGWHMAANAGLAIVMLVEGGFELGAIAHALGSNHRRYADETDEHPVSAIECYLPGRTERVSGDSGPSVYVDFGHSADAFENTLAAVRQFTPGKVLMLFGADGDRDKTKRGDMARVAAAGSDILVVTDHHPRFEDAASIRKTLVDAAREAYPDHETYEVSPPEAAIRKAVSLLGEGDSILWAGPGHQDYRDIEGVRTPYSARDEARQALREAGWEPNSGPAEEIR

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Crispr_ID: NZ_CP027869_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_7

1404997-1405088

Orphan

Consensus_repeat	Method
CGGCGTCGAGGCGTCCGGCGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_7

>merge|NZ_CP027869|7|1404997-1405088|CRISPRCasFinder
CGGCGTCGAGGCGTCCGGCGCCGTCCTCGACGTCCTCGACGACCGCGGCCGCACGGCGTCGACCGGCGTCGGCATCGAGGCGTCCGGCGCCG

>NZ_CP027869|7|7|1404997-1405088|CRISPRCasFinder
CGGCGTCGAGGCGTCCGGCGCCG	TCCTCGACGTCCTCGACGACCGCGGCCGCACGGCGTCGACCGGCGT
CGGCATCGAGGCGTCCGGCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_058748986.1\|1416847_1418695_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP027869.1\|WP_137767072.1\|1407540_1410114_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP027869.1\|WP_137767071.1\|1405761_1407471_+\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|274331
NZ_CP027869.1\|WP_137767068.1\|1401636_1403049_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP027869.1\|WP_058729759.1\|1398079_1398994_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224050
NZ_CP027869.1\|WP_058729758.1\|1397229_1397877_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380058
NZ_CP027869.1\|WP_058729757.1\|1396012_1397077_-\|DUF2183-domain-containing-protein	unknown	unknown	gnl\|CDD\|227187
NZ_CP027869.1\|WP_137767064.1\|1394037_1395924_-\|glycoside-hydrolase-family-15-protein	unknown	unknown	gnl\|CDD\|225922
NZ_CP027869.1\|WP_137767073.1\|1411213_1413865_+\|ComEC/Rec2-family-competence-protein	unknown	unknown	gnl\|CDD\|377126
NZ_CP027869.1\|WP_137768696.1\|1410392_1411142_+\|ComEA-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|224472
NZ_CP027869.1\|WP_137767077.1\|1419678_1420302_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_058729755.1\|1392449_1393823_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237233
NZ_CP027869.1\|WP_137767069.1\|1403050_1404055_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP027869.1\|WP_137767065.1\|1398990_1399707_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224095
NZ_CP027869.1\|WP_137767075.1\|1415524_1416691_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|235596
NZ_CP027869.1\|WP_137767076.1\|1419044_1419668_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137767074.1\|1413728_1414748_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|236130
NZ_CP027869.1\|WP_058729393.1\|1414970_1415231_-\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|376586
NZ_CP027869.1\|WP_137767066.1\|1399703_1400432_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224095
NZ_CP027869.1\|WP_137767067.1\|1400428_1401349_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270324

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_058748986.1\|1416847_1418695_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP027869.1\|WP_137767072.1\|1407540_1410114_+\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP027869.1\|WP_137767071.1\|1405761_1407471_+\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|274331	TIGR02868, ABC_transporter_ATP-binding_protein, thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.	2.42907e-128
NZ_CP027869.1\|WP_137767068.1\|1401636_1403049_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	0
NZ_CP027869.1\|WP_058729759.1\|1398079_1398994_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	1.60642e-130
NZ_CP027869.1\|WP_058729758.1\|1397229_1397877_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380058	pfam17928, TetR_C_22, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present the TetR Transcriptional Repressor present in sco1712 proteins from Streptomyces coelicolo which act as a regulator of antibiotic production.	1.25495e-20
NZ_CP027869.1\|WP_058729757.1\|1396012_1397077_-\|DUF2183-domain-containing-protein	gnl\|CDD\|227187	COG4850, COG4850, Uncharacterized conserved protein [Function unknown].	9.90901e-59
NZ_CP027869.1\|WP_137767064.1\|1394037_1395924_-\|glycoside-hydrolase-family-15-protein	gnl\|CDD\|225922	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism].	1.96552e-124
NZ_CP027869.1\|WP_137767073.1\|1411213_1413865_+\|ComEC/Rec2-family-competence-protein	gnl\|CDD\|377126	pfam03772, Competence, Competence protein. Members of this family are integral membrane proteins with 6 predicted transmembrane helices. Some members of this family have been shown to be essential for bacterial competence in uptake of extracellular DNA. These proteins may transport DNA across the cell membrane. These proteins contain a highly conserved motif in the amino terminal transmembrane region that has two histidines that may form a metal binding site.	3.35317e-43
NZ_CP027869.1\|WP_137768696.1\|1410392_1411142_+\|ComEA-family-DNA-binding-protein	gnl\|CDD\|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	8.73572e-25
NZ_CP027869.1\|WP_058729755.1\|1392449_1393823_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|237233	PRK12853, PRK12853, glucose-6-phosphate dehydrogenase.	0
NZ_CP027869.1\|WP_137767069.1\|1403050_1404055_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	8.17185e-108
NZ_CP027869.1\|WP_137767065.1\|1398990_1399707_+\|ABC-transporter-permease	gnl\|CDD\|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	6.09641e-36
NZ_CP027869.1\|WP_137767075.1\|1415524_1416691_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	5.00744e-120
NZ_CP027869.1\|WP_137767074.1\|1413728_1414748_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|236130	PRK07914, PRK07914, hypothetical protein; Reviewed.	5.43756e-58
NZ_CP027869.1\|WP_058729393.1\|1414970_1415231_-\|30S-ribosomal-protein-S20	gnl\|CDD\|376586	pfam01649, Ribosomal_S20p, Ribosomal protein S20. Bacterial ribosomal protein S20 interacts with 16S rRNA.	1.86416e-22
NZ_CP027869.1\|WP_137767066.1\|1399703_1400432_+\|ABC-transporter-permease	gnl\|CDD\|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	3.30858e-54
NZ_CP027869.1\|WP_137767067.1\|1400428_1401349_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270324	cd13606, PBP2_ProX_like, Bacterial substrate-binding protein ProX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold. This group includes periplasmic substrate-binding component of ABC transport systems from gram-negative and -positive bacteria that are involved in uptake of osmoprotectants (also termed compatible solutes) such as betaine, choline, proline betaine, carnitine, and L-proline. To counteract the efflux of water, many microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.63388e-128

>NZ_CP027869.1|WP_137767069.1|1403050_1404055_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MDLPVLWFAIVGLFFVGYFVLDGFDFGVGMSLPFLGKDDTDRRVLINTIGPVWDLNETWVIVAGACLFAAFPEWYATMFSGFYLALLLILVALIARGVSFEYRHQRKHPEWKRRFDLMIVVGSAVPAFLWGVAFGNVVRGIPMDAGHNFTGTFLDLLNPFALLTGLATLLVFFTHGVVFVALKTEGDIRERAKRLATRAGVLTIVVAAAFLVSMAFVRATPASLVLSVVAALALVLAVLCTVWGKEGRAFTLMAVTIAAVVLAMFTAIFPDVMPASNDPANSLNVTNASSGQYTLTVMSWVALVFVPLVLAYQAWTYWVFRKRVSRAHIDQAAH
>NZ_CP027869.1|WP_137767068.1|1401636_1403049_+|cytochrome-ubiquinol-oxidase-subunit-I
MNDILDPLILSRWQFGLTTIYHFLFVPLTIGMALVVAVFQSAWVRTGRAHYLQLTRFFGRIFLINFAMGVVTGIVQEFQFGMNWSNYSRFVGDVFGAPLALEGILAFFFEAAFIGIWIFGWDRLPRALHLASIWCVSVGTMMSAYFILAANAFMQHPVGFAINEAKGRAELTDIWAVLTNKVALAAFPHTLFGAFMVAASVIIAVAAWHLARNQNLETMMPALKFGMWTMLASGALTVLSGDQLGLTMVDTQPMKMAAAEALYNTSTGKDASFSIFTLGTPDGVHELFSIRIPYLLSFLSTHTFTGTVEGINDLQAQYSQVYGPGDYKPIIWVTYWSFRWMIALGVGAVLVSVVGLWLTRKGRFPTQRWVWRVATWSVPLPMAAMIMGWVFTEMGRQPWLVFGLLRTADGVSPNVTGVEVLISLVVFTLIYGALAVVEFKLIKKVAQEGPAAPAEVDEATGEVKHEVTVY
>NZ_CP027869.1|WP_137767067.1|1400428_1401349_+|ABC-transporter-substrate-binding-protein
MITARIRVALAAATALGVAAALTGCSSGDPLSSGSSASSDSKTIVIGSQQYYSNEIIAELYAQVLEKDGFTVQRNFNIGQREVYIPQLEKGAIDVMPEYSGNLLQYFDKESTAKSADQIDEALEKALPKGLRVLDEAEATDQDSYTVTKQFSEENDVTSLSDLKNVKEKLTVGANSEFQTRPYGPEGLKSVYGVDVDFTAIEDSGGALTVKALKDGTVQLADIYSADPSIKANDFVSLKDPENLILPQNVIPVVSDKVDEKAADAIDEVNEKLTTDKLIELNEKSVTDKEKASQIAKQFLQDEGLL
>NZ_CP027869.1|WP_137767066.1|1399703_1400432_+|ABC-transporter-permease
MIIGQAFGWVFDPANYTGFNAIPERLWEHVWITLLAVAIASLIAVPIGYAIGHTGRARGFSIALSGGIRALPTLGVLSLFGLLLGIGLEAPLLALVVLAIPSVLAGAYAGIESVDPVTIDAAKAQGMTGWQVLWKVEVPLGLPLLIGGIRSAVLQVVATATLAAYVGAGGLGGYFFLGLKTQDYAEMLGASVLVIALAIAFEIVFAALQRASVPKGTLDPSARQRQGSRERARNPIPEGNPS
>NZ_CP027869.1|WP_137767065.1|1398990_1399707_+|ABC-transporter-permease
MNWILSNLDTISDATIAHLAIAIPPIIISFLLSIPIGWVVVRLQRPGGSRFAAGLGSGIVTFAGLLYAIPSLALFVALPGIIGTSLQSPVNVIISLTIYGLALMVRSTVDGLTSVDAGTKAASTAMGYSTVQRFFRVELPLAGPVLLAGLRVVTVSTISLTTVGAVLGIQSLGSLFTDGLARGIYEEILSGIVMVLVLAFALDGLLVALGRLVMPWTRRAPRSRRTARRVLQRAEVVS
>NZ_CP027869.1|WP_058729759.1|1398079_1398994_+|ATP-binding-cassette-domain-containing-protein
MIEFRSVRKTYPDGTNAVDDFSLVIPSRTTTVFVGSSGCGKTTLLRMINRMVDPSSGTVEIDGEDVAGVDPVQLRRRIGYVMQNAGLLPHRKVADNIATVPLLTGVSKGEARARALELMDTVGLDRAFADRYPSQLSGGQQQRVGVARGLAVDPNVLLMDEPFGAVDPLVRNDLQDELIRLQRELGKTVVFVTHDIDEAFKLGDQVVILKKGGEIAQLGTPAEILAEPADDFVANFIGAGRGRRALRVEQTPTGPIVVDGDGRAAGVLTGPVQVVDAAAAVPQAAEAGARDTAPGAPAQGGGPR
>NZ_CP027869.1|WP_058729758.1|1397229_1397877_+|TetR/AcrR-family-transcriptional-regulator
MLVTEVSNALPGGSSLLRNEPVQARSSARLAGLLDAAAAVIDEIGFERLTTAMVAERAGASIGTVYRYFPDRIAVVEALAIRSTQRLAERFLTALDESDATTWQDAHDALIDATVEMYRSEPGFRAIRFGDPADTGTGDAEDRMAALGAAVAQILHDRFGYPLGERPERAWVVLAESAHAVIARALRDRSAPDTALIEEYRTMSRAHLEAVAAAA
>NZ_CP027869.1|WP_058729757.1|1396012_1397077_-|DUF2183-domain-containing-protein
MPDPTPHEPSLAEPILHRAARIEDAVQEFREHRARRRGLVPTVIPYTGYGAPGWIRVLCRVLLTRRGLASDASYYGVRGWRSFTSVAVDDAEVTVTAGGTTHVVQSDRGGVVDVKVPIDLEPGWQTVRLSAGGMRDVEADVFIVDPETRFGLLSDIDDTVMVTSLPRPMLAAWNSFVLTEHARRPVPGMSVLYERVLAQHPGAPTVYLSTGAWNVAPTLQRFLTRNMYPSGTLLLTDWGPTHDRFFRSGQLHKQQNLRRLASDFPDVQWLLVGDDGQHDETLYGEFAREHPENVAGVAIRQLSTSEAVLAGGRSRAQERTRAGSAPWVYAPDGAGMWAELSRVGLVDADPSAPL
>NZ_CP027869.1|WP_137767064.1|1394037_1395924_-|glycoside-hydrolase-family-15-protein
MSTATPLNRIEDHALIGDTYTAALVGRDGTIDWACLPRFDSPSTFASLLGTEDHGHWSLRPTDPEATSTRHHHPDTLVLSTVWTTSTGVVEVTDLMPIGAHRAAIIRRVRGLQGSVEVEQTLRIRFDYARALPWVRQIGGDEDPALLATAGPGSVVVRGVRFRADDHRHTHAVTVHDGDVVDTVLTWYPSHREPPEPLDVDAALQATEHWWRDWMATAHTEGPYAEASRRSLLLLRAMTHGQTGGVVAAATTSLPEDPGGERNWDYRYVWLRDASLALASLIAHGYRDEAMHWRGWLLRAIAGDPADVQIMYGIAGERELPERTLDELPGYLDSTPVRLGNGASTQYQGDVFGEVLAALHDARELGVEENADSWALQRALLGYVEEHWQQPDNGIWEMRGPRRHFTHSRAMIWAAFDRGVAAVEEFGLEGPVDRWRQLRDEVRAEIEQHGWNAERGSYRQHYDTDEVDASLLVLPQIGYVPADDPRMTGTVAAIEQDLRVGDHGLVLRYRTTSGFDGLSGSEHPFLACSFWLVEQYAASGRVEDAERLMDVLVGYANDVGMLSEEIDVATGHHIGNTPQVLSHLTLVSAADAIARARGTSSGHRTRLAVHDGGTRSWTGGGRRAGAPS
>NZ_CP027869.1|WP_058729755.1|1392449_1393823_+|glucose-6-phosphate-dehydrogenase
MTDKRTLIIFGATGDLASRLLLPGLGTFLQSGRAVPVQLIGTGRSARSAEQWKDVVTKSFASQDVKGPEVDATLESTTFIQGDPTDPEHLKALLDAADAEPILYFALPPQIASDICEALQGVELPEGTTLAFEKPFGTDVASAEALNKTVLELVPEERVHRTDHFLGRTTVLNIIGLRFANRLFEPIWNADNIEKVDVFYDETLGLENRAQYYDEAGALVDMIQSHLLQILGLVTMDAPAAIDAVEFRSSLARVLRSTRLKGDDPKIASRRAVYTAGTIDGKELPSYQDEDGVDKSRGTETLAEIEVEVDTARWKGVPFTLRSGKALGASRKEVLITFKPVTRLPSGLSGRPKADTLRIVLNPDEIELSVSANGGGNPFEMGQVTLSSSFDDGELTPYGEVLNGIFHDDPLLSIRGDVAERCWEIVEPVVDAWKSGDVPLEEYRAGSRGPADWESSS
>NZ_CP027869.1|WP_137767071.1|1405761_1407471_+|thiol-reductant-ABC-exporter-subunit-CydC
MSREARPTSVLRLALPHGAGWAKAVSAGTLSAVCAVALLAASGYLITRAAEQPPILYLTLVMVGVRAFALGRAALRYVDRLAGHDASFRQLAVVRTEMYRRLASVAPAGLGATGRGDLLTRLVTDTDRLQDLPIRVVGPLVSAAVVALLSVVAVAVVWWPAAVVLVVALALAALLGTVATLAVARRSDRETAAERGRVADLVLDTVRTLDVFTAYGTLPDRLAAVAALDARVTRAVRRRATVESLVGALVSLVGGGAVVGVLAVGAPAVVSGALGGPLWALAVFVPLALFEVVGGVPLAVLTLRRVRAAAERVEQVVPAVLPDGIVPEPDAPADPAELVVDGPVRVALRDVTVRWPGAATPAVDRVSLDLQPGEVVVLEGPSGAGKSTLVDALVRFVDHEGSYTLDGVEARTMHPDAVRARVGLVEQDPFVFDQSVRQNLLFARDTATDAELVDVLDRVGLGPWGERRGGLDAPVGERGGLLSGGQAHRLALARALLHAFPVLVLDEPTADVDPDLGDAVLRDLVGAARQAGRTVLVVSHVPVPADLVDRTLRMRDGRLVTDGAARSIR
>NZ_CP027869.1|WP_137767072.1|1407540_1410114_+|leucine--tRNA-ligase
MTTEHSTAHSTEHDAVDPDAYDFRRIQEKWQPRWEELGLFTTDLDDSRPRKYILEMFPYPSGDLHMGHAENWALGDFVARYWRQQGFNVLHPIGWDSFGLPAENAAIKRGVDPAEWTYANIEQQKASFKRYAPSFDWTTEIHTSDPEYYKWNQWLFLKMYEKGLAYRKDSWVNWDPVDQTVLANEQVLPDGTSDRSGAVVVKKKLTQWYFAITKYADRLLDDLNQLEGRWPAKVIAQQRNWIGRSVGADVDFVIEGRDEPVTVFTTRPDTIHGVTFLVVAPDSDLAAELVSSAEPAVREAFDEYLTATQKTSEIDRQNADRPKTGVPLGRSAIHPLTGERLPIWAADYVLADYGHGAVMAVPAHDQRDLDFARAFDLPVQVVVDTNQPVTGAIPVIPEGATLEDLPALDPVATGEALTGQGRMINSGPLDGMSKQHAITAAISLLEERGTGRAAKTYRLRDWLISRQRFWGTPIPIIHGADGTEHPVPMDQLPVRLPSTEGLDLKPKGTSPLGGATDWVNVPNPVDGTPATRDTDTMDTFVDSSWYFLRFLSAQDDTQAFDPEAARKWAPVDQYIGGIEHAILHLLYARFVTKVLFDLGYLDFTEPFSALLNQGMVLSGGSKMSKSKGGVSLGDELDANGVDAIRLVMGFAGPPEDDINWEDVSPSASARFLARAYRLALDVTSTPDAVWADGDRALRQVTHRFLADAPGMMEAFKFNVVIARLMDLVNVTRKAVDSGPGAGDPAVREAVETIALALAVFAPYTGEEMWEKLGYEATVATYGWRKADPTLLVQDTLTAVVQVNGKVRDSFEVSKSIEADELEQLARASANVQRYIGDREIVKVIVRAPKLVNIAIKG
>NZ_CP027869.1|WP_137768696.1|1410392_1411142_+|ComEA-family-DNA-binding-protein
MSRFALSPRTAVVLAAVVVVLALVVVALGTLGTHSSAGVTVTSGPSSAAVSGGPDGVPDAGASARSKAGSGEVSGTASGSPTPAVVSVYVVGAVARAGVVEVPAGTRVDEALQRAGGATGDADLARLNLARPVVDGERLYVPRIGEGPVPDALRPDAPGVGGSGGGGSGAGGAAGGSGAGGEDAAAAVVDLNTADQATLETLPGIGPALAARILAWREEHGGFTAVDDLLQVSGIGETRLAELRDRVRV
>NZ_CP027869.1|WP_137767073.1|1411213_1413865_+|ComEC/Rec2-family-competence-protein
MFAWVEAVLLVGTPCASWWCAASAGAVGLVVVLVLVVLARSGRHDRSGTDDEGAVVPDPSSGDRGAAVRGVLGVALITAGCCALVAVAVAVGAPERSPGALVDRSGRTVSVEVVLTRDLAATDRSTTGTMRALDSVGGLAVPVRVVPGERLLAAAGSTLRVRGTVQLDDDGSPTAAVVFLRGRPLVVPPTGLLAWTDRVRQAFVTVTDGLPEPGGALLRGLAIGDRSGLDPATEAAMETTALTHLTAVSGSNCAVLVALVVAGCRAFGLPRVVRVVVAVGFLVAFVVLVRPDPSIVRAAVMAVIVLAVRLSGRPLRGVPLLALTVLGMLVVDPWYARAPAFALSVLATGGIIVLAPPLTALLAERWGRAVAAAVAIPVAAQLACWPVTVVLAPSLPTYAVPANLLTEPLAPVVTLTGLLACLLAPVWPWGAGVVAHVAWAPAAAIGAIAHGVAALPAATLDWPAGPLGAATAGTASTALAAAVLADRRRRTSALVAAGAVVAIGLGVVAVPRLVVRSTVPGDWSVVACDVGQGDAVLVRDGAGPVALVDTGDDEGLLLRCLDLLGVDRIDLLVLTHFDRDHVGAVGAVADRVARALVGRIGRPEDDRVVEELDRAGVEVHTADNGTSGTLGALDWRLAWPPAGSPGSGNDASLVLETMRGAACTACVTGVFLGDLGERAQRRLRRIVEPHPDVVKVAHHGSADQDPALYRQLAAPIGLIGVGADNTYGHPTASALDALRAAGTTAFRTDEQGTIVVSRSADGALQVWTERTAPPPSAPALGANVPAAATVRMVAAPSATGRPVAVPSATVRTVAAASAAARRIGPGPDQLAPEPTEGTHARQEAHARRRQDRPGAVVRRPTGARRARHRARAVPGRACEQRPP
>NZ_CP027869.1|WP_137767074.1|1413728_1414748_+|DNA-polymerase-III-subunit-delta
MPAKKPTRAAAKIDQVPWSGVRPAPVVLVTGPEQFLAERASSVLRDLLVGEDPALEVHDLEADQYAPGLLATLASPSLFGEPRLVRVTNVEKCTDAFITETISYLQAPADDVTLVLRHGGGVRGKKLLDTIRSGVGGGVEVQCDELKRDTDKIDFVNAEFRAARRKIAPSAVRTLVAAFSDDLAELAAACRQLLADEAEEITDRTVDKYYGGRVETNAFKVADIALAGRSAPAIVELRHALATGEAPVPIVAAFASKVRTMAKVSAFRGPSGQAASALGMAPWQVQRAQRDVAGWSEAGLANAITSIAAADTAVKGGSRDAHYALEVMVRTIARRGEER
>NZ_CP027869.1|WP_058729393.1|1414970_1415231_-|30S-ribosomal-protein-S20
MANIKSQMKRIKTNLKAQERNKAYRSELKTVIRHTNEAVVAGDKDKAVAALALASKKLDKAVSKGVIHKNQAANRKSAIAKKVSAL
>NZ_CP027869.1|WP_137767075.1|1415524_1416691_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MPSLAPRIDSVPASGIRRVYEQAALLRADGTDVAMLVIGEPDVPVAPHIGEAARRAWTEDRTDYTPNGGVTPLREAIRDKLRRENRIDVDVEQVWMTIGATQALFQAMTLVLSPGDEVLVPDPGYTTFTMNAHIIGATPVPYRLEPQHDFEPDLEALEASITEHTRAIVVNSPSNPLGSVFGEETLRALLALAKRHDLWVVSDEVYEYFTHGTRHVSIAALDEDDRVFTAFSLSKTYAMTGVRVGYLVTPKGMGPTMRTTQEAMISCVAEPDQWAALAAIVGDHQAVQDAREHYRANLAVAKEVLDAAGIRYLDPRGAFYLWIDVSHASQGDVAEWALAFLHREHVAVAPGSAFGRSGEGWIRVCLAATVEDLRRGLGALPAPVSVTV
>NZ_CP027869.1|WP_058748986.1|1416847_1418695_+|elongation-factor-4
MSPQASAPLEPAATPAEAIRNFCIIAHIDHGKSTLADRMLQITGIVEERAMRAQYLDRMDIERERGITIKSQAVRMPWELDGQTFALNMIDTPGHVDFSYEVSRSLAACEGAILLVDAAQGIEAQTLANLYLALENDLEIIPVLNKIDLPAADPDKYAAELAQLIGGKPEDVLRVSGKTGAGVPELLDRVVGSVPAPVGTVDAEPRAMIFDSVYDSYRGVVTYVRMIDGTIKPREKIQMMSTRTTHEILEIGVSSPEPKPTKGLSVGEVGYLITGVKDVRQSKVGDTVTSAQRPATEALPGYTDPKPMVFSGLYPIDGSDYPDLREALDKLKLSDAALVYEPETSVALGFGFRCGFLGLLHLEIITERLSREFGLDLITTAPSVVYEVTNEDNSVTEVTNPSEFPGGRIVEVREPMVRAAILAPKDYVGAIMELCQSRRGSLLGMEYLGEDRVEIRYEMPLGEIVFDFFDQLKSKTQGYASLDYEPTGDQAADLVKVDILLQGEQVDAFSAIVHRDKAYAYGTLMTERLRKLIPRQQFEVPIQAAIGARIIARESIRAMRKDVLAKCYGGDITRKRKLLEKQKEGKKRMKMVGRVEVPQEAFIAALSGDVEEKKK
>NZ_CP027869.1|WP_137767076.1|1419044_1419668_+|hypothetical-protein
MSRHATTVTRARRRRSELVTIAAGVAAAVVLALSFSGTLSVFTQAFVHGTNTVSTSTIRIVETAADGSPGACTTTADGTASCTDPDLYGGGSLRPGDSSTTQTISFANTGTATPTGFRLTGGPCTTAPTSGSDLCSQLVVKMTWRGADVLPASTTPAFLAANAITLPNPPAAGERFPLTVQVSLPESATAPTSGVTLSQALTFTFSA
>NZ_CP027869.1|WP_137767077.1|1419678_1420302_+|hypothetical-protein
MSRHSTTVRRASVPTGWLLTAAGLVASVALALTTTGTTSAYTASIANTTNTANTVSIAMTQGPDASTVACRSTATGTTSCATDLYAGKDLRPGDTTRGTATVIRNTGGVTASAFSLAPGTCIGTVSTSNSICSWLRVTVTWTTTAGTTTVVSGESAGAISGRTFPIDPAPAAGQGGTATVTVALDPAAPNDSQAQSMSQSLVWTFTA

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Crispr_ID: NZ_CP027869_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_8

1836696-1836765

Orphan

Consensus_repeat	Method
CCGTCGCCGTCGCGTCGCCCGTCGCC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP027869_8

>merge|NZ_CP027869|8|1836696-1836765|CRISPRCasFinder
CCGTCGCCGTCGCGTCGCCCGTCGCCGCTGCCCGTCGCCGTCGCCCGTCGCCATCACGTCGCCGTCGCCG

>NZ_CP027869|8|8|1836696-1836765|CRISPRCasFinder
CCGTCGCCGTCGCGTCGCCCGTCGCC	GCTGCCCGTCGCCGTCGC
CCGTCGCCATCACGTCGCCGTCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137768741.1\|1835894_1836602_+\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|181176
NZ_CP027869.1\|WP_058727815.1\|1837760_1838543_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP027869.1\|WP_137767392.1\|1846364_1846964_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
NZ_CP027869.1\|WP_137767381.1\|1828248_1829076_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223640
NZ_CP027869.1\|WP_137767386.1\|1838552_1839752_-\|glycogen-synthase	unknown	unknown	gnl\|CDD\|273997
NZ_CP027869.1\|WP_137767388.1\|1841120_1841759_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP027869.1\|WP_137767379.1\|1825426_1826617_+\|acetamidase	unknown	unknown	gnl\|CDD\|225279
NZ_CP027869.1\|WP_058727809.1\|1844650_1846249_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP027869.1\|WP_137767380.1\|1826613_1828188_+\|DUF3225-domain-containing-protein	unknown	unknown	gnl\|CDD\|181375
NZ_CP027869.1\|WP_137767389.1\|1841874_1842588_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|273824
NZ_CP027869.1\|WP_137768740.1\|1831606_1832680_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340838
NZ_CP027869.1\|WP_137767387.1\|1839799_1841041_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|234846
NZ_CP027869.1\|WP_137767384.1\|1832685_1833672_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP027869.1\|WP_137767378.1\|1823935_1825378_-\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_CP027869.1\|WP_137767385.1\|1833943_1835656_+\|maltose-alpha-D-glucosyltransferase	unknown	unknown	gnl\|CDD\|274140
NZ_CP027869.1\|WP_137767383.1\|1830832_1831573_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137767382.1\|1830052_1830688_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP027869.1\|WP_137767391.1\|1843547_1844576_+\|SURF1-family-protein	unknown	unknown	gnl\|CDD\|119401
NZ_CP027869.1\|WP_137767390.1\|1842751_1843243_+\|DUF3099-domain-containing-protein	unknown	unknown	gnl\|CDD\|378630
NZ_CP027869.1\|WP_022905175.1\|1837375_1837624_-\|type-B-50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234969

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137768741.1\|1835894_1836602_+\|3'-5'-exonuclease	gnl\|CDD\|181176	PRK07942, PRK07942, DNA polymerase III subunit epsilon; Provisional.	2.91125e-107
NZ_CP027869.1\|WP_058727815.1\|1837760_1838543_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	2.28545e-84
NZ_CP027869.1\|WP_137767392.1\|1846364_1846964_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	2.72427e-31
NZ_CP027869.1\|WP_137767381.1\|1828248_1829076_-\|RNA-methyltransferase	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	1.04937e-53
NZ_CP027869.1\|WP_137767386.1\|1838552_1839752_-\|glycogen-synthase	gnl\|CDD\|273997	TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP027869.1\|WP_137767388.1\|1841120_1841759_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.03919e-77
NZ_CP027869.1\|WP_137767379.1\|1825426_1826617_+\|acetamidase	gnl\|CDD\|225279	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion].	1.36653e-52
NZ_CP027869.1\|WP_058727809.1\|1844650_1846249_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	7.19609e-171
NZ_CP027869.1\|WP_137767380.1\|1826613_1828188_+\|DUF3225-domain-containing-protein	gnl\|CDD\|181375	PRK08310, PRK08310, amidase; Provisional.	2.30504e-105
NZ_CP027869.1\|WP_137768740.1\|1831606_1832680_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	8.20297e-60
NZ_CP027869.1\|WP_137767387.1\|1839799_1841041_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|234846	PRK00844, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP027869.1\|WP_137767384.1\|1832685_1833672_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.18848e-21
NZ_CP027869.1\|WP_137767382.1\|1830052_1830688_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	4.28824e-56
NZ_CP027869.1\|WP_137767385.1\|1833943_1835656_+\|maltose-alpha-D-glucosyltransferase	gnl\|CDD\|274140	TIGR02456, Trehalose_synthase, trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP027869.1\|WP_137767389.1\|1841874_1842588_-\|SDR-family-oxidoreductase	gnl\|CDD\|273824	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.12948e-109
NZ_CP027869.1\|WP_137767378.1\|1823935_1825378_-\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	2.05432e-35
NZ_CP027869.1\|WP_137767391.1\|1843547_1844576_+\|SURF1-family-protein	gnl\|CDD\|119401	cd06662, SURF1, SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring complex of the respiratory chain, is an assemblage of nuclear and mitochondrially-encoded subunits. Its assembly is mediated by nuclear encoded assembly factors, one of which is Surf1/Shy1. Mutations in human Surf1 are a major cause of Leigh syndrome, a severe neurodegenerative disorder.	1.13761e-47
NZ_CP027869.1\|WP_137767390.1\|1842751_1843243_+\|DUF3099-domain-containing-protein	gnl\|CDD\|378630	pfam11298, DUF3099, Protein of unknown function (DUF3099). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	5.57891e-23
NZ_CP027869.1\|WP_022905175.1\|1837375_1837624_-\|type-B-50S-ribosomal-protein-L31	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	9.94216e-46

>NZ_CP027869.1|WP_137768741.1|1835894_1836602_+|3'-5'-exonuclease
MQDLSGRPWWHALGVFDLETTGVDVETARIVTAHVGLIDMTGRSIVEGAWVADPGIAIPEGAAAVHGYTTERAQAEGRPAGEVVAEIVAAVEAVFARGIPLVIYNAPYDLTVLDREARRHGIASPVIGNVVDPLVIDKALDTYRKGKRTLEAASELYGVTLSDAHDAGADAIAAGRVAQAIAAKYPEELGVSAEELHRKQVGWCAEQATSFQDYMRKKRDPSFTADGRWPHRNGS
>NZ_CP027869.1|WP_137767385.1|1833943_1835656_+|maltose-alpha-D-glucosyltransferase
MTFTAPIQLPGLTLDPQWYKRSVFYECMIRSFVDSNGDGIGDIQGVIGKLDYLQWLGVDAIWLPPFFQSPMRDGGYDISDYKAILPEFGTLDDFRELVTKSHERNMRIVIDMVINHTSDQHEWFQQSREDPDGPYGDFYVWRDTDEHYENIRIIFVDTEESNWTFDPVRRQFFFHRFFSHQPDLNFENPAVVEAVYDVVRHWLDLGVDGLRLDAIPYLFESEEGNGEGEPETHEFIKKLRAMVDDEYPGRVLLAEANQWPRETAAFFGTDEEPECHMAFDFPVMPRIFYSLRAQHAAELKAILSETLDVPEKAAWGVFLRNHDELTLEMVSEEYRQAMYGWYGYDPRMRSNIGIRRRLAPLLDNSRAELELIHALLFSLPGSPFLYYGDEIGMGDNIWLPDRDSSRTPMQWTPDRNAGFSTADPGKLYLPVVQSLVYNYAQVNVEAQLAQSRSLLHWVRNVIHVRKAHPVFGMGSLHVQDTSNESVLAFVRSWEGSGQQFGPSAEDVLCVFSFATNPTSVTISAPEFADRPLYDLFGGGSFPSFDEEGTVTLTMGTQSFYWLHVGAPVGV
>NZ_CP027869.1|WP_137767384.1|1832685_1833672_-|alpha/beta-hydrolase
MQPPVISPYQSLVAATPVVHRALTVDGRTTHYWEYGPADATETVLAVHGFRGDHHGLETIAAHLLGKRVVVPDLPGFGISDPLPVSDIDSYVTWLTGFHRALGLDPDTVVLGHSFGSIVTAAAVAAGLETRLLVLVNPIAAPALQGPRAIGTGIAIGYYRAAALLPRALGLGLLRNGAIVRAMSLAMLKARDRDLRRWVHDQHDRYFSAFADRTSVLEAFRTSVTHDVSEYADRIDVPVLLVAAEHDDITAVPEQRALAERLRDAELVVVPGVGHLVHYETPGAAADAVLRRMAEPAPRRRAGRGHARGSKRSSAQPAPGSASGESAS
>NZ_CP027869.1|WP_137768740.1|1831606_1832680_-|glycosyltransferase-family-4-protein
MRIGIDCRYVRIGRHDGISRFTAGIVAHLPDRHDHVLLVHDERQLASLPEGMPWERIPAPTDAGEPLVARAVNRLGLDAVFSPMQTMGSRGRQYALVLTLHDLIYYRNRTPPREFSWPIRIGWRLFHLSWAPQRLLLNGADGVVTVSETTAGLIEQHRLTKRPVTVAYNAADPAAPRDPAAGRSRTLVYMGSFMPYKNVATLAAALPLLGADWTLHCMSRVSDADRRRLEALAPTGSIVFHDGASDDEYLATLRSATALATASFDEGFGIPLVEAMGVGTPVVVSDVPIFREIGGDAAEYFDPSSPSAVAAAVRRLEARWDEAARASLERAARFRWQDSAEQVTRAVERAVADRQHR
>NZ_CP027869.1|WP_137767383.1|1830832_1831573_+|hypothetical-protein
MTNQGPATDGPAEDGARPEDDLDRAFGPETASVATPSIGQRVRRGTVITLAFVAVGVVIALVLSVIVGSVQTGVGGVFPRPQAALDRFRSAAGAVPGVSAVRDEQTTRDSLAAYRVSAVVDAAPGLSAGQQVDLVRALSAAAADADGNGVVVSAEVHLDTLTVGVTTDAEVTRQRLEVARTVAAIGGVVGVRCDWGSETPKDAADAQRVELVTGGTGEALAAIMDVAQRETQAVFPGADVSSRQST
>NZ_CP027869.1|WP_137767382.1|1830052_1830688_+|histidine-phosphatase-family-protein
MTTLLTLVRHGETDWNAQRRIQGSTDIPLNDTGRSQAAATALLLGRRRFDAVVASPLSRAFETGAIIARHLGLPEPTTYPGLAERSYGEAEGLTDTEVARRYPDDVIPGRESRSALLERATETLAEIAVRFDAGSVVVATHGAVIRAVVNAAAPGTADRWTTPIRNGSVHSFRWDPERFRAELVRFDDPLDDVSEQTGDESFAEQNPLERR
>NZ_CP027869.1|WP_137767381.1|1828248_1829076_-|RNA-methyltransferase
MHPVRIDSLDDPRLDDFARLTDVALRRVMEPEGGLYIAESNTVIERAVRAGHVPRSVIVQEKWLDSVLPLVAEHEGPVFVGPDALLEDLTGFRMHRGALAAMHRPQLPSVADVVRDAKVVVVLEDVVDHTNVGAVFRSVAGLGADAVLVSPRCADPLYRRSVRVSMGTVLQVPWTRIGEWPAAGEELRAQGFHLAAMALTDRSVDLDAFVADVPQRVALVMGTEGQGLTDAAIASADTTVRIPMAHGVDSLNVAAASAVGLWAVTHAQRAARPSA
>NZ_CP027869.1|WP_137767380.1|1826613_1828188_+|DUF3225-domain-containing-protein
MSAATRDTGGPAVPAGLLDALDAYERALADDDLAALDDAFVRSPDTLRGDDRGLLVGHDAISAFRGTRGGIAPRHLSRVEVRVLAEDLALVVSVSAFRDGGSGLQTQLWRRDPEAWRIEAAHVTGRQRPLDTTVWRVVGDPLLPPTGSGPLDRATVAVKDLYAVAGHRVGAGNPTYLRESEPAAASAAAVAALLDAGASVRGIARTDEFAYALTGRNEHHGTPPNAADPSRVPGGSSSGSASAVRSGAADVGLGTDTAGSLRIPASYQGLWGLRTTHGVVDRAGLLPLAPSFDTVGWLTRDADTLVRALDATVLHGSDRASDAGTPVVLAELLAAADPATQDAFRAVAGDLPVVTLDDLGIPPLDELRELLRLVQGAEATAAHGVWIVAHPGALGDVVGARFATAAANGPELVAAAHTRFPVVRAAIRAALADRVLVAPTAPGPAPSLTASAEELERVRTATTTMTALASVGGVPSLSAPALTVDGAPVGLCLTGGTGTDRSLATTADRWLRDGVGASLPAGTT
>NZ_CP027869.1|WP_137767379.1|1825426_1826617_+|acetamidase
MHHGTTPGATHGDRTTAPPSGDPTSTTRSPRRPSQPSTATVLQPGTGPVRSSRYLPAEADQVLWGRLPSGDDRPVVTLAPGDDLTIDTVSHEGLLPDQGSDPVAFFGRHGVPPEHVLADAVAIARTGRRHPEQDGPHVVTGPIAVEGAEPGDVLTMTVLETLPRVPYGVVSNRHGRGALHGEYPVDGTTVSVFADVVPGDDGPRGRIPITEGGDRYARFPLAPFLGIMGVATPGERLHSVPPGRHGGNIDVNLLQVGAQLHLPVLVPGALAYVGDPHFAQGDGEVALTAMEASLRATVRFDVTPAAEAAQQFGDLVWPLVETHEHLVPTGLDPDLDEAVRACVRHAIAILGARYGMEPHLAYAYVSAATDFDVSQVVDLVTGAHARIRKADFADVR
>NZ_CP027869.1|WP_137767378.1|1823935_1825378_-|D-alanyl-D-alanine-carboxypeptidase
MFYVFVTRRARPWPAGPCRRAARCRPASRDRPVPSVPVPRTARSPRSAVRRPVTIGVVAVLLLAVGYLVAVAVVPFAPASASTTKYSAPTSTLPDLRFPGYGATAVQATGFPESLRTSGDSKPRSIASITKVVTALVVLDAKPLGRGESGPTIRFDPQMQALYAEYLAQNGEVAPMPDGLQLSEYQTMQVMLMKSANNYAGSLALWAFGSMDAYQRAASAWLDEHGLDDTTIHEPTGLDPANQSTATDLVRLGQLALADPVVKEIVGTQQVTVPGAGQIENSNKLLGLDGIEGIKTGTLDQAGACLLFAATYQRGGRQVTVVGVMLGGKDHPSLDVDVRTLLRSVADNFQVVTLTHAGQTFGTYSTPWHDDADAVAAQASEVLVWGDTTVTARTRLDSLTLGERGERVGTVRFTIEHHDPVTVPLELERSIEDPGLWWRWTNPFRGVETTTAAGPGPAAGPTAAAGPASTASTERWGLAA
>NZ_CP027869.1|WP_022905175.1|1837375_1837624_-|type-B-50S-ribosomal-protein-L31
MKTDTHPEYNAIVFRDLASGETFLTRSTATSDKTIELDGATYPVIDVEISSASHPFYTGKQRILDSAGRVEKFNQRFKGFSK
>NZ_CP027869.1|WP_058727815.1|1837760_1838543_-|ABC-transporter-ATP-binding-protein
MPSVVRLSDVSVVRNGATILDGISWEVQDDERWVVLGANGAGKTTLLQVAGAQTFPTSGSVEVLGTELGGADLFELRPRIGFASTALARRIPVTEKVVDVVLTAAYSVTGRWNEEYEELDVRRAQRVLDEWGLGDFTDRTFGELSDGEQKRVQIARAVMTDPEVLFLDEPAASLDLGARESLVRTLGGYAQSSDSPAIVIVTHHVEEIPEGFTHALVLADGTVQAAGPIDEVLTAPTLSQAFGVELTVSKDAGRYTARAA
>NZ_CP027869.1|WP_137767386.1|1838552_1839752_-|glycogen-synthase
MRVDLLTREYPPEVYGGAGVHVAELTAALRSGTDTDVRVRAFGAYRDEEGVWAYRTPEGLEHANGALQALGTDVRIAADVEGADLVHSHTWYANAAGRIAQLTHGVPHVVTAHSLEPLRPWKAEQLGGGYRLSSWMEREAFEQADGVIAVSKAMRADILRSYPSIDPAKVHVVYNGIDIDEWKPTVDEDAVRALGIDPSRRSVVFVGRITRQKGLPYLLRAVASLPSDVQIVLCAGAPDTPEIMAEVTGLVESLREERDGVVWIDRMLSHQEVVNVLSSGTVFVCPSIYEPLGIVNLEAMACGIPVVGTRTGGIPEVVADGLTGRIVPIDQAQDGTGTPNDPDRFVADLAATLDEVLADEGLAKLMGRAGRLRVESEFTWDAIAHRTRQVYDEVLARKP
>NZ_CP027869.1|WP_137767387.1|1839799_1841041_+|glucose-1-phosphate-adenylyltransferase
MAPKKVFGIVLAGGEGKRLMPLTADRAKPAVPFGGNFRLIDFALSNLVNSGLQKIVVLTQYKSHSLDRHVAETWRMEGLLGSYVASVPAQQRLGKRWFAGSADAILQSLNLLRDERPDIVVVVGADHVYRMDFHQMIEAHIASGRSATVAAIRQPIALADQFGVIQVDQDDPTKIDAFLEKPKDAVGLADSPGEILASMGNYVFDADALVDAVLRDGQIETSNHDMGGDIVPDFVSRGDAGVYDLQRNDVPGSNERDRYYWRDVGTIDSFFDAHMDLIAPVPVFNLYNQDWPIFNQQTNLPPAKFVRDANGNTGSTVDSIVALGCLLSGAQVERSVIGPWCGIDSGAKVLDSIVFERASIGAGSIVNRAILDKDVVIAPGAQVGVDREADEARGFTVTDSGITVVGKGVRVEA
>NZ_CP027869.1|WP_137767388.1|1841120_1841759_+|phosphoserine-phosphatase-SerB
MPRFLVVLDADSTLLEDEVIELLADHAGTRPQVQAVTERAMRGEIDFAESLRERVATLAGLPADVCTRAQQAVRVTRGAEELVRGVHAAGGTVGVVSGGFHEVLDPFAARLGLDHCRANRLEVVDGVLTGRVLGDVVDAHAKAATLREWAEADGVDAAHTVAVGDGANDLEMMRVAALSVAFDAKPRVREQADVAVVDRDLSAVLATLGLRG
>NZ_CP027869.1|WP_137767389.1|1841874_1842588_-|SDR-family-oxidoreductase
MTTPRTVLVTGGNRGIGHALAARFVAEGHRVAVTSRSGHGGPEGALTVAADITDSASVDAAFTQVEAELGPIEVLVANAGITNDQLLLRMSEEDFTTVIDTNLTGTFRVVKRATKGMMKAKFGRIVLMSSVVGAYGQVGQVNYASSKAALVGMARSITRELGSRGITANVVAPGFIQTDMTAALPEELQAEFKKQIPAARYGTVDDVADATLFLASDGAGYVSGAVIPVDGGLGMGH
>NZ_CP027869.1|WP_137767390.1|1842751_1843243_+|DUF3099-domain-containing-protein
MEEHRMKSTQRRFHATHTHSGSTQSITSLPDSPELDRAHRLSKYVWQMAVRVVCFIGAVLIWTTWHTWLAVIPIVLAAVIPWVAVILANAGSNAESDIVTPAGALELYDAVDPRLREQQEDARAEAYRAEQERLREQAQHAQEEWQRNGDRSRVWSTKSRTRR
>NZ_CP027869.1|WP_137767391.1|1843547_1844576_+|SURF1-family-protein
MTDQFDPTARYGRKHAAKLQRETGHRPAQTTASTAGPDDDAASGSARAAADTTPAADGPTVGWAFVRSRRWLGYFAIAVVFAIICALFGMWQWDRRNEAVRQNEQIAQNYDHTPVPLDQALPRASSWDDDQQWLRVEVTGRYDVDDQLLVRNRVHNGQPGFEVLTPLVTADGRAFVVDRGWVPTGNRQDAPDSVPAPPSGVVTVTARLQQSEPRIPGRTDPSHTDQVQSVTLADVADKVDTPIWTGAYGQLASESPAPAESRPLGWDRPSADTGLHLSYFIQWFLFAAGGFGFLGYVMVQEYRNLNQDDPEERERALERQRRKDAKPRSDDEVEDELLSAHR
>NZ_CP027869.1|WP_058727809.1|1844650_1846249_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MLAVHDLEIRVGARLLMEHVSFRVEKGDKIGLVGRNGAGKTTMTKALAGESQPTDGKIERSGEIGYLPQDPRSGNPEDTARKRILDARGLGELVEGIRQATLDMASEDPDTAEKAMRRYSRLDDQFNALGGYAAEAEAASIASNLKLPDRILDQPLKTLSGGQRRRIELARILFSDAETMILDEPTNHLDADSIIWLREHLKTYAGGVIVISHDVELVDEVVNRVFYLDANRQTIDVYNMGWKLYQRQRAADEDRRRKERANAEKKAATLKDQAARFGAKATKAAAAHQMVARAEKLLAGLEDERAVDRVAKLRFPTPAACGRTPLMAEGLSKSYGSLEIFAGLDLAIDRGSRVVILGFNGAGKTTLLRILAGADQPDTGEILPGHGLRIGYYAQEHENIDVNRTVIENMVSASPNLTETEARRVLGSFLFTGDDGYKKAGVLSGGEKTRLSLAMIVVSGANVLLLDEPTNNLDPASREEILGALAGYEGAVVLVSHDAGAVEALNPERVLLLPDGTEDHWNKDYAELVELA
>NZ_CP027869.1|WP_137767392.1|1846364_1846964_+|biotin-transporter-BioY
MTNATGFARRAVLADRLRTSGLATDAALVAGGALFTAAMAQLQVPMWPVPITGQTLAVVLVGATLGARRGMLSLLVYAVAGLAGAPFFAEFSGGLAALTSPSFGYVIGFVPAAGLVGWLARRNWDRKVGRAAMAMLLASAIPFVTGLPWLAVVLGQLGAPNDLQSVLAAGLYPFIVGGVAKALIAAGVLPLAWKLTGRR

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Crispr_ID: NZ_CP027869_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_9

1853106-1853208

Orphan

Consensus_repeat	Method
CCGCTCGCGGTCCCGCGGCTGCCGCGACACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_9

>merge|NZ_CP027869|9|1853106-1853208|CRISPRCasFinder
CCGCTCGCGGTCCCGCGGCTGCCGCGACACCGTGGTCGTCGCACGACAGCGGATGCGTCACCTGAATCGGCGCCGCTCGCGGTCCTGCGGCTGCCGCGACACC

>NZ_CP027869|9|9|1853106-1853208|CRISPRCasFinder
CCGCTCGCGGTCCCGCGGCTGCCGCGACACC	GTGGTCGTCGCACGACAGCGGATGCGTCACCTGAATCGGCG
CCGCTCGCGGTCCTGCGGCTGCCGCGACACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137767397.1\|1856918_1858031_+\|transaldolase	unknown	unknown	gnl\|CDD\|235117
NZ_CP027869.1\|WP_058727797.1\|1862247_1862499_-\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|235881
NZ_CP027869.1\|WP_137767396.1\|1854670_1856764_+\|transketolase	unknown	unknown	gnl\|CDD\|223100
NZ_CP027869.1\|WP_137767398.1\|1858224_1859763_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_CP027869.1\|WP_058727807.1\|1847631_1848399_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP027869.1\|WP_058727805.1\|1850127_1851546_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
NZ_CP027869.1\|WP_058727809.1\|1844650_1846249_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP027869.1\|WP_137767390.1\|1842751_1843243_+\|DUF3099-domain-containing-protein	unknown	unknown	gnl\|CDD\|378630
NZ_CP027869.1\|WP_137767402.1\|1863395_1864613_-\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_CP027869.1\|WP_137767393.1\|1847302_1847632_-\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
NZ_CP027869.1\|WP_137767399.1\|1859759_1860704_+\|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA	unknown	unknown	gnl\|CDD\|378404
NZ_CP027869.1\|WP_058727798.1\|1861884_1862244_-\|RNA-polymerase-binding-protein-RbpA	unknown	unknown	gnl\|CDD\|379162
NZ_CP027869.1\|WP_137767395.1\|1853352_1854297_-\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|235293
NZ_CP027869.1\|WP_137767394.1\|1851796_1852783_+\|heme-A-synthase	unknown	unknown	gnl\|CDD\|224528
NZ_CP027869.1\|WP_126892073.1\|1848457_1848787_-\|non-heme-iron-oxygenase-ferredoxin-subunit	unknown	unknown	gnl\|CDD\|239604
NZ_CP027869.1\|WP_137767392.1\|1846364_1846964_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
NZ_CP027869.1\|WP_137767401.1\|1862619_1863399_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_CP027869.1\|WP_137767391.1\|1843547_1844576_+\|SURF1-family-protein	unknown	unknown	gnl\|CDD\|119401
NZ_CP027869.1\|WP_137768742.1\|1848783_1850070_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|376550
NZ_CP027869.1\|WP_137767400.1\|1860811_1861582_+\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|376480

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137767397.1\|1856918_1858031_+\|transaldolase	gnl\|CDD\|235117	PRK03343, PRK03343, transaldolase; Validated.	0
NZ_CP027869.1\|WP_058727797.1\|1862247_1862499_-\|preprotein-translocase-subunit-SecG	gnl\|CDD\|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	1.46044e-10
NZ_CP027869.1\|WP_137767396.1\|1854670_1856764_+\|transketolase	gnl\|CDD\|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NZ_CP027869.1\|WP_137767398.1\|1858224_1859763_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_CP027869.1\|WP_058727807.1\|1847631_1848399_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	4.05655e-139
NZ_CP027869.1\|WP_058727805.1\|1850127_1851546_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP027869.1\|WP_058727809.1\|1844650_1846249_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	7.19609e-171
NZ_CP027869.1\|WP_137767390.1\|1842751_1843243_+\|DUF3099-domain-containing-protein	gnl\|CDD\|378630	pfam11298, DUF3099, Protein of unknown function (DUF3099). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	5.57891e-23
NZ_CP027869.1\|WP_137767402.1\|1863395_1864613_-\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP027869.1\|WP_137767393.1\|1847302_1847632_-\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	2.4476e-30
NZ_CP027869.1\|WP_137767399.1\|1859759_1860704_+\|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA	gnl\|CDD\|378404	pfam10128, OpcA_G6PD_assem, Glucose-6-phosphate dehydrogenase subunit. Members of this family are found in various prokaryotic OpcA and glucose-6-phosphate dehydrogenase proteins. The exact function of the domain is, as yet, unknown.	3.62436e-90
NZ_CP027869.1\|WP_058727798.1\|1861884_1862244_-\|RNA-polymerase-binding-protein-RbpA	gnl\|CDD\|379162	pfam13397, RbpA, RNA polymerase-binding protein. RbpA is a family bacterial RNA polymerase-binding proteins. RbpA acts as a transcription factor by binding to the sigma subunit of RNA polymerase.	1.82587e-42
NZ_CP027869.1\|WP_137767395.1\|1853352_1854297_-\|protoheme-IX-farnesyltransferase	gnl\|CDD\|235293	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional.	4.09626e-144
NZ_CP027869.1\|WP_137767394.1\|1851796_1852783_+\|heme-A-synthase	gnl\|CDD\|224528	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones].	2.34781e-27
NZ_CP027869.1\|WP_126892073.1\|1848457_1848787_-\|non-heme-iron-oxygenase-ferredoxin-subunit	gnl\|CDD\|239604	cd03528, Rieske_RO_ferredoxin, Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO). The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms. These enzymes enable microorganisms to tolerate and even exclusively utilize aromatic compounds for growth. ROs consist of two or three components: reductase, oxygenase, and ferredoxin (in some cases) components. The ferredoxin component contains either a plant-type or Rieske-type [2Fe-2S] cluster. The Rieske ferredoxin component in this family carries an electron from the RO reductase component to the terminal RO oxygenase component. BPDO degrades biphenyls and polychlorinated biphenyls. BPDO ferredoxin (BphF) has structural features consistent with a minimal and perhaps archetypical Rieske protein in that the insertions that give other Rieske proteins unique structural features are missing. CARDO catalyzes dihydroxylation at the C1 and C9a positions of carbazole. Rieske ferredoxins are found as subunits of membrane oxidase complexes, cis-dihydrodiol-forming aromatic dioxygenases, bacterial assimilatory nitrite reductases, and arsenite oxidase. Rieske ferredoxins are also found as soluble electron carriers in bacterial dioxygenase and monooxygenase complexes.	9.52486e-39
NZ_CP027869.1\|WP_137767392.1\|1846364_1846964_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	2.72427e-31
NZ_CP027869.1\|WP_137767401.1\|1862619_1863399_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	5.23325e-122
NZ_CP027869.1\|WP_137767391.1\|1843547_1844576_+\|SURF1-family-protein	gnl\|CDD\|119401	cd06662, SURF1, SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring complex of the respiratory chain, is an assemblage of nuclear and mitochondrially-encoded subunits. Its assembly is mediated by nuclear encoded assembly factors, one of which is Surf1/Shy1. Mutations in human Surf1 are a major cause of Leigh syndrome, a severe neurodegenerative disorder.	1.13761e-47
NZ_CP027869.1\|WP_137768742.1\|1848783_1850070_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|376550	pfam01458, UPF0051, Uncharacterized protein family (UPF0051).	5.89456e-83
NZ_CP027869.1\|WP_137767400.1\|1860811_1861582_+\|6-phosphogluconolactonase	gnl\|CDD\|376480	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase.	1.9334e-81

>NZ_CP027869.1|WP_137767394.1|1851796_1852783_+|heme-A-synthase
MTRVGPTVEQGVRPGTRDPRWWSLPRAVDPRVIWLAWASFVVEVVLIGTGGLVRLTASGLGCPTWPKCTAESLVSTPEMGIHGVIEFGNRLLTFVLVIVAVAMFLLVVRMRRTRPELFWLAFAQGIAIPVQAVIGGLSVLTNLNPFVVGLHFVVSTTLVAVTATLVYRSMNGPRTAARLVPGWYTGLVRGTVAAVVVTVLVGILTTGSGPHAGASEAVDGGRLHRTGFDPQLMEHLHAIPAYVLFALTLALVVGAVVLRLSSRWALVLLVVEFVQIAVGLTQARTGLPVGLVGTHMVLAGLLVGAVTVVVLSTRGSAGRQAVRERIAA
>NZ_CP027869.1|WP_058727805.1|1850127_1851546_-|Fe-S-cluster-assembly-protein-SufB
MSDVLIDRPELEGLGQYEFGWSDSDTAGASARRGLSDEVVSDISARKDEPEWMRKLRLKALTLFDRKPMPSWGADLSDIDFDNIKYFVKSTEKQAQTWEELPEDIRNTYERLGIPEAERQRLVAGVAAQYESEVVYHQIREDLEQQGVIFMDTDTALREHPEFFEEYFGSVIPAGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYVHYIEGCTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNWSSNVYNLVTKRAIAHEGATMEWIDGNIGSKVTMKYPSIYLAGEHAKGETLSVAFAGPGQHQDAGAKMIHMAPYTTSSIVSKSIARGGGRAGYRGEVRVDPAAHHAANTVRCDALLVDTVSRSDTYPAIDIRVDDVQLGHEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALELNKLIEMSMEGSVG
>NZ_CP027869.1|WP_137768742.1|1848783_1850070_-|Fe-S-cluster-assembly-protein-SufD
MDQPVEPSAVAQGQQTPSAQGTERTAGSEQHGARAHSDGGWDTKVPVQTRSERPQSGDLDAFPPVTGREVNWKFAPLAKLQPLLDGGLDGSAYRFLARQTEGADVEWGRSDDPVVGSAGLPEDRAAAAAWTARDAVLKVTVKATDAHESISITRSDFGTSARAAHTVITAEQHAQGIVVIDNRGSALLSENVEIVVRDGARLTVVSLQDWDDDAVHVSTQFAEVGRDAFLKHVVVSLGGDVVRVNPSTHLGAQGADTEMYGVYFADAGQYIEQQVYVNHDAPNTRGRVNYKGALQGEGAHTVWIGDVLIGRAGDGTDSYEQNRNLVLTDGTRADSIPNLEIETGNIEGAGHASATGRFDDEQLFYLQARGIPEEEARRLVVLGFLVEVIQKIGAPELEERLIAAVEQELADGRTAVAAAEPEAEQADA
>NZ_CP027869.1|WP_126892073.1|1848457_1848787_-|non-heme-iron-oxygenase-ferredoxin-subunit
MMAEKVCAESEIAVDSPMRVVVDGTAVAIVKDSAGTVHAIGDTCTHGDISLAEGFVEGDTLECWAHGSRFSLATGKPQNFPAYEPVPVFRVEVRDGDVYVDVHDTVPVD
>NZ_CP027869.1|WP_058727807.1|1847631_1848399_-|Fe-S-cluster-assembly-ATPase-SufC
MSTLEIRDLQVSIDTDQGTKEILKGVDLTINEGEIHAIMGPNGSGKSTLAYTIAGHPRYNVTGGSITLDGEDVLSMSVDERARAGMFLAMQYPVEIPGVTVSNFLRTAKTAIDGEAPALRGWVKDLRQSMADLKMDSSFAERNVNEGFSGGEKKRHEIMQLELLKPKFAVLDETDSGLDVDALKIVSEGVNRAKAATGLGVLLITHYTRILRYIKPDFVHVFVAGKVAEQGGPELAERLENEGYDRYVQAAAAGN
>NZ_CP027869.1|WP_137767393.1|1847302_1847632_-|metal-sulfur-cluster-assembly-factor
MITALSPEKFDEVVEGLKEVQDPELGVNIVDLGLIYDLAMDDEAKALVISMTLTSAGCPLTDVIEGDTANALDGIVDAFRINWVWMPPWGPERITDDGREMMRALGFSI
>NZ_CP027869.1|WP_137767392.1|1846364_1846964_+|biotin-transporter-BioY
MTNATGFARRAVLADRLRTSGLATDAALVAGGALFTAAMAQLQVPMWPVPITGQTLAVVLVGATLGARRGMLSLLVYAVAGLAGAPFFAEFSGGLAALTSPSFGYVIGFVPAAGLVGWLARRNWDRKVGRAAMAMLLASAIPFVTGLPWLAVVLGQLGAPNDLQSVLAAGLYPFIVGGVAKALIAAGVLPLAWKLTGRR
>NZ_CP027869.1|WP_058727809.1|1844650_1846249_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MLAVHDLEIRVGARLLMEHVSFRVEKGDKIGLVGRNGAGKTTMTKALAGESQPTDGKIERSGEIGYLPQDPRSGNPEDTARKRILDARGLGELVEGIRQATLDMASEDPDTAEKAMRRYSRLDDQFNALGGYAAEAEAASIASNLKLPDRILDQPLKTLSGGQRRRIELARILFSDAETMILDEPTNHLDADSIIWLREHLKTYAGGVIVISHDVELVDEVVNRVFYLDANRQTIDVYNMGWKLYQRQRAADEDRRRKERANAEKKAATLKDQAARFGAKATKAAAAHQMVARAEKLLAGLEDERAVDRVAKLRFPTPAACGRTPLMAEGLSKSYGSLEIFAGLDLAIDRGSRVVILGFNGAGKTTLLRILAGADQPDTGEILPGHGLRIGYYAQEHENIDVNRTVIENMVSASPNLTETEARRVLGSFLFTGDDGYKKAGVLSGGEKTRLSLAMIVVSGANVLLLDEPTNNLDPASREEILGALAGYEGAVVLVSHDAGAVEALNPERVLLLPDGTEDHWNKDYAELVELA
>NZ_CP027869.1|WP_137767391.1|1843547_1844576_+|SURF1-family-protein
MTDQFDPTARYGRKHAAKLQRETGHRPAQTTASTAGPDDDAASGSARAAADTTPAADGPTVGWAFVRSRRWLGYFAIAVVFAIICALFGMWQWDRRNEAVRQNEQIAQNYDHTPVPLDQALPRASSWDDDQQWLRVEVTGRYDVDDQLLVRNRVHNGQPGFEVLTPLVTADGRAFVVDRGWVPTGNRQDAPDSVPAPPSGVVTVTARLQQSEPRIPGRTDPSHTDQVQSVTLADVADKVDTPIWTGAYGQLASESPAPAESRPLGWDRPSADTGLHLSYFIQWFLFAAGGFGFLGYVMVQEYRNLNQDDPEERERALERQRRKDAKPRSDDEVEDELLSAHR
>NZ_CP027869.1|WP_137767390.1|1842751_1843243_+|DUF3099-domain-containing-protein
MEEHRMKSTQRRFHATHTHSGSTQSITSLPDSPELDRAHRLSKYVWQMAVRVVCFIGAVLIWTTWHTWLAVIPIVLAAVIPWVAVILANAGSNAESDIVTPAGALELYDAVDPRLREQQEDARAEAYRAEQERLREQAQHAQEEWQRNGDRSRVWSTKSRTRR
>NZ_CP027869.1|WP_137767395.1|1853352_1854297_-|protoheme-IX-farnesyltransferase
MTATATRPDTDRPRSTLSRKVRAYVSLTKPRVMELLLVTTAPTMFLAERGVPDLWLVFWTMLGGAMSAGSASAFNCYIDRDIDRLMKRTSQRPLVTGELSDREALVFSWTLAVLSTAVLGFLVNWLAAALSVVAILIYVCVYTLWLKRRTPQNIVWGGSAGCMPVLIGWAGVTGSLSWAPIILFMVIFLWTPPHYWPLSMKYRDDYDAADVPMLAVVRGRTVVGLQVVLYAWATLVCSLLLIPVAHMGPLYTVVALAGGIWFVVESHRLYSRAIQHVEQVQPMRVFHSSITYLTLLFIAVGIDPLLPQVFTFTI
>NZ_CP027869.1|WP_137767396.1|1854670_1856764_+|transketolase
MAEFTWDAIDRKAVDTARVLAADSVEAAGNGHPGTAMSLAPVAHLLFQKVMRRDPSDSTWIGRDRFILSAGHASILQYVQFYLHGYGLELEDLQHLRKWGSKTPGHPEYGHTDGVEITTGPLGQGLASAVGFGYAQRFERGLFDPETADGESPFDHFTYVIAGDGDMQEGVTNEAASLAGRQQLGRLVVFYDSNQISIEDDTDIAFSEDVAARYEALGWHVQHVDWKKTGEYSEDVEELYRAVEAAKAETTKPSLIVLKTIIGWPSPTKQNSGKIHGSALGADELKGLKEVLGFDADKTFHVDPEVLEYTRGAITKGQEQHAEWNKTFDAWAAANPEKKAMLDRINAGELPEGLEEALPVFSTEKAVSTRAASGKVINAIAPLMPEFWGGSADLAESNLTTIEGAKSFGPAEASTKTWSTDPYGRVLHFGIREHAMGSILSGIVLHGNTRPFGGTFLIFSDYMRPAVRLAALMKAPAIYVWTHDSIALGEDGPTHQPIEQLTALRAIPGLDVVRPADANEVSYAWLEMLKHKDRPAGIALSRQNLPVFERGEGDASGDTLASAKNVGKGAYVLAEAPNGTPDVILIATGSEVQIAVDAREQLKGEGINARVVSAPSLEWFFEQSESYREQVLPKAVTARVSVEAGIAMSWRDIVGDKGRSVSIEHFGASADYQRLFAEFGFTTEHVVAAAKESIAAS
>NZ_CP027869.1|WP_137767397.1|1856918_1858031_+|transaldolase
MAENTPTAALSEVGVSIWLDDLSRELLETGKLTELIEQKNVVGVTTNPTIFASALAKGERYDAQVKELAAKGTDVTEAIFEITTQDVANASDVFKPIYDETKGFDGRVSIEVEPGLAHDTQKTIEQAKFLFEKVGRENVLIKIPATLEGLEAITEVIGAGISVNVTLIFSLERYRAVIDAYLGGLEKAKAAGHDLSKIHSVASFFVSRVDSEIDKRLDAVGTDEATALKSKAGIANAQLAYQVWTEAFATERALGLLESGANTQRPLWASTGVKDPSLPDTLYVTELAAPNTVNTMPGKTLDATFDHGEIHGDAIAGSYEAAQQVMDQIAAAGVDYDDVVALLEKEGVDKFNVSWGELVDTVKTALENSK
>NZ_CP027869.1|WP_137767398.1|1858224_1859763_+|glucose-6-phosphate-dehydrogenase
MSPVAITPEHNPLRLPTDRRLNRIAGPSTLIIFGVTGDLSRKKLMPAVYDLANRGLLPPGFALVGFARRDWEDQDFSQLVHDAVRDHSRTPFDEAVWKQLEQGIRFVQGSFDDPEAFLELKRTVDELDAERGTLGNHAFYLSIPPKMFPVVTEQLKVSGLTEKREGSWSRVVVEKPFGSDLRTARELNAIVESVFAPDDVFRIDHYLGKETVQNLLTLRFANQMYEPIWNSNHVDHVQITMAEDIGVAGRAAYYDGIGAARDVIQNHLLQLLALTAMEEPVSFKAADLRAEKEKVLSAVRLPEDLATATARGQYDGGWQGGEKVLGFLEEAGMNPESTTETYAAIKLDIATRRWQGVPFYLRAGKRLGRRVTEIAIVFKRVPEDVYGNTEAPLGQNALVIRVQPDEGVTLRFGSKVPGVGTQVRDVTMDFGYGHAFTEASPEAYERLILDVLLGDPPLFPRHQEVELSWKILDPIEEFWATQGQPEQYRPGTWGPASADALLARDGRTWRRP
>NZ_CP027869.1|WP_137767399.1|1859759_1860704_+|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA
MKIDMPNTTVSKIQKKLVHIREEGGAVALGRVLTLIISTALGHEEEAISAANQASREHPMRVIIVSKNDGDTKSPGRLDAQIRVGSDAGASEVIVLRAYGETATDEESLVTGLLLSDAPVVAWWPQAAPEQPAASALGRIAQRRITDAAAQKDPNRAIEALGKSYVPGDTDFAWTRLTLWRNQLAAALDQPPYEPVTGVEVSGASDSPSTVLLAAWLQLRLEVPVSVVTSPRATGSSGIHGVKLHRASGTIDLERSLVDVATLSMPGQPTHDLSLPRRNLRDCLAEELRRLDPDVLFGDVVKHGVPQLRETIAG
>NZ_CP027869.1|WP_137767400.1|1860811_1861582_+|6-phosphogluconolactonase
MTNERRVLVHPDKQSLGASVAARFITKIIDVLDEQERADIAISGGSVSTLVLAAIGQSPARESVDWSKVHVWWVDERWVAEGDADRNVTGTQSDFFAHVDIPETNIHPMAPSDAGLTIEEAAAQYEREMQDAAPEGAVAPRFDITLLGVGPDGHTASLFPEFPQLAVTDRAVLTVDDSPKPPAQRLTLSFPVINASQRVWVILSGAEKASVLGLALAGAAVDEVPVGGVQGRKRTVFFVDQDAARDVPENLIASTY
>NZ_CP027869.1|WP_058727798.1|1861884_1862244_-|RNA-polymerase-binding-protein-RbpA
MATGGSAIRGSRVGAGPMGEQDRGVQAERVAVSYWDALGNEVVRYFSATLPEDEIPETVDSPSTGLPAGRDKENPPVVAKTEPYKTHLAYVKERRTEEEAAQLLEDALQQLRQRRGTAK
>NZ_CP027869.1|WP_058727797.1|1862247_1862499_-|preprotein-translocase-subunit-SecG
MAILSVVLQVLLAITSLLLTLLILLHKGRGGGLSDMFGGGVTSNLGASGVAERNLNRITVILGLVWIVSIIVLGLINKFTAGS
>NZ_CP027869.1|WP_137767401.1|1862619_1863399_-|triose-phosphate-isomerase
MTRTPFIAGNWKMNLDHLQAIATVQKLAWTLKDARHDHDDVEVAVFPPFTDLRSVQTLISADKLAIEFGAQDLSQYDSGAYTGDVSGAFLAALDAKYVIVGHSERRTVHGETDEVVAAKTAAAVKHGLVPVVCVGETGEEREQRGAGVVPVEQLKVVLDAVKPSEIVVAYEPVWAIGSGQAATPEQAQEDCAALRRGIAEAWGDDLAASTRVLYGGSVKSGNIAGFLREPDIDGALVGGASLDVQEFAAIARFRQHVGL
>NZ_CP027869.1|WP_137767402.1|1863395_1864613_-|phosphoglycerate-kinase
MSLRTLEDLGDLAGKRVVVRCDLNVPLKDGTITDDGRVRASLGTLNTLVNAGARVIVISHLGRPDGTPAQEYSLAPVAQRLSELLGKEVTFVGETVGDEATAAAEALGDGDVLLLENLRFNPEETSKDASERQAFAERIAALGDAFVSDGFGVVHRKQASVYELAAALPSAAGSLIESELTVLERLTKDPQRPYTVVLGGSKVSDKLGVIEHLLPQVDTLCIGGGMLFTFLAAQGHGVAKSLLEQDQLDTVRAYLAKADELGVTIDLPTDVVVASGFAADADHETVAADAIESSSFGADGIGLDIGPETAARFASAVSGSKTVFWNGPMGVFEFPAFAAGTKAVAQALTEVDGLGVVGGGDSAAAVRSLGFSDDRFGHISTGGGASLEFLEGKSLPGLEALGWSR

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Crispr_ID: NZ_CP027869_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_10

1889147-1889250

Orphan

Consensus_repeat	Method
CCGAAGCCGAAGGACGGCGACGCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_10

>merge|NZ_CP027869|10|1889147-1889250|CRISPRCasFinder
CCGAAGCCGAAGGACGGCGACGCCCCGAAGCCGCCGACGGGGTCCGACGCGCCGAAGTCGCCGACGGACGAGAAGGCTCCGAAGCCGAAGGACGGCGACGCCCC

>NZ_CP027869|10|10|1889147-1889250|CRISPRCasFinder
CCGAAGCCGAAGGACGGCGACGCCCC	GAAGCCGCCGACGGGGTCCGACGCGCCGAAGTCGCCGACGGACGAGAAGGCT
CCGAAGCCGAAGGACGGCGACGCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137768746.1\|1886402_1887974_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP027869.1\|WP_137767410.1\|1885848_1886406_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP027869.1\|WP_137767415.1\|1899564_1900560_-\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|234599
NZ_CP027869.1\|WP_022903868.1\|1884805_1885411_-\|response-regulator	unknown	unknown	gnl\|CDD\|226230
NZ_CP027869.1\|WP_058729696.1\|1891640_1893086_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|180487
NZ_CP027869.1\|WP_137767407.1\|1878745_1880425_-\|DUF885-domain-containing-protein	unknown	unknown	gnl\|CDD\|377577
NZ_CP027869.1\|WP_137767413.1\|1890162_1891239_-\|rubrerythrin-family-protein	unknown	unknown	gnl\|CDD\|153124
NZ_CP027869.1\|WP_137767406.1\|1876327_1876930_-\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP027869.1\|WP_137767409.1\|1884041_1884512_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP027869.1\|WP_137767411.1\|1887973_1888636_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP027869.1\|WP_058727787.1\|1877019_1878489_-\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|236126
NZ_CP027869.1\|WP_137768745.1\|1883657_1884026_+\|hotdog-fold-thioesterase	unknown	unknown	gnl\|CDD\|182337
NZ_CP027869.1\|WP_137767408.1\|1880883_1883556_-\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_CP027869.1\|WP_137767417.1\|1901561_1902776_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_CP027869.1\|WP_137768748.1\|1902838_1903639_-\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NZ_CP027869.1\|WP_137767416.1\|1900761_1901565_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP027869.1\|WP_137767414.1\|1893225_1894683_-\|glutamate-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|237213
NZ_CP027869.1\|WP_137768747.1\|1894742_1899308_-\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968
NZ_CP027869.1\|WP_137767419.1\|1903889_1904690_-\|Trp-biosynthesis-associated-membrane-protein	unknown	unknown	gnl\|CDD\|378200
NZ_CP027869.1\|WP_137767418.1\|1903653_1903893_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137768746.1\|1886402_1887974_-\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.58421e-48
NZ_CP027869.1\|WP_137767410.1\|1885848_1886406_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	1.4033e-18
NZ_CP027869.1\|WP_137767415.1\|1899564_1900560_-\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	1.18491e-79
NZ_CP027869.1\|WP_022903868.1\|1884805_1885411_-\|response-regulator	gnl\|CDD\|226230	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms].	4.25138e-58
NZ_CP027869.1\|WP_058729696.1\|1891640_1893086_-\|pyruvate-kinase	gnl\|CDD\|180487	PRK06247, PRK06247, pyruvate kinase; Provisional.	0
NZ_CP027869.1\|WP_137767407.1\|1878745_1880425_-\|DUF885-domain-containing-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	1.91204e-174
NZ_CP027869.1\|WP_137767413.1\|1890162_1891239_-\|rubrerythrin-family-protein	gnl\|CDD\|153124	cd02433, Nodulin-21_like_2, Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. .	1.56754e-80
NZ_CP027869.1\|WP_137767406.1\|1876327_1876930_-\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	6.05299e-77
NZ_CP027869.1\|WP_137767409.1\|1884041_1884512_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.25751e-11
NZ_CP027869.1\|WP_137767411.1\|1887973_1888636_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.09885e-69
NZ_CP027869.1\|WP_058727787.1\|1877019_1878489_-\|30S-ribosomal-protein-S1	gnl\|CDD\|236126	PRK07899, rpsA, 30S ribosomal protein S1; Reviewed.	0
NZ_CP027869.1\|WP_137768745.1\|1883657_1884026_+\|hotdog-fold-thioesterase	gnl\|CDD\|182337	PRK10254, PRK10254, proofreading thioesterase EntH.	5.87369e-24
NZ_CP027869.1\|WP_137767408.1\|1880883_1883556_-\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP027869.1\|WP_137767417.1\|1901561_1902776_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_CP027869.1\|WP_137768748.1\|1902838_1903639_-\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	1.68165e-102
NZ_CP027869.1\|WP_137767416.1\|1900761_1901565_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	6.13809e-108
NZ_CP027869.1\|WP_137767414.1\|1893225_1894683_-\|glutamate-synthase-subunit-beta	gnl\|CDD\|237213	PRK12810, gltD, glutamate synthase subunit beta; Reviewed.	0
NZ_CP027869.1\|WP_137768747.1\|1894742_1899308_-\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NZ_CP027869.1\|WP_137767419.1\|1903889_1904690_-\|Trp-biosynthesis-associated-membrane-protein	gnl\|CDD\|378200	pfam09534, Trp_oprn_chp, Tryptophan-associated transmembrane protein (Trp_oprn_chp). Members of this family are predicted transmembrane proteins with four membrane-spanning helices. Members are found in the Actinobacteria (Mycobacterium, Corynebacterium, Streptomyces), always associated with genes for tryptophan biosynthesis.	5.13841e-14

>NZ_CP027869.1|WP_137767411.1|1887973_1888636_-|response-regulator-transcription-factor
MVVEDDDSLRTAVAATLRAEGFVVTEASDGRSIADDLDRAAPDLVLLDWMLPGPSGILLAARVRTRSDAAVVMMTARDELDDRLRGFAEGADDYVVKPFAMAELVARVTAVLRRRGRVPSVIEVGDLVLDPDGATVRRGGVLLDLTATEFRLLRFLAESRGRTVSKGQITTQVWGYEDIAPNLVEVHLSALRRKMEAHGPRLVHTVRGLGYRLAVDRGAA
>NZ_CP027869.1|WP_137768746.1|1886402_1887974_-|HAMP-domain-containing-protein
MPAGGRLRTTSLRLRTVVAVLVLLAVLLAGLVVAVEAVLGARLRAQVEDRLRDRAAAAAALVGVLDADDLADRLSAQGLSVRIVQPDGAAVEAGPTPDQLRSGPPDPGGLPGPAARERSSGSTGPGSSSAGSSSAGSSGSASGAATSGASVVSSSVRYDDGVLTLRSVLDDGTRITLTAGTRDVQETLAQLAWVMGGASAAFLGVAVVGVVLVVRRALRPLDEVTATARSIADGDRGRRLRPARTDTEIGRVAVAFDEMLDAVEGAEAQAVAAEERVRGFLSDAAHELRTPVAGVRAAADTLVRSGGDDPATTEVLAVHVVRQADRAARLVDDMLTMARLDRGIALDRRTTDLVPWLRAEVDRLELRLPGIALHTELPSDAVVAEVDPDRLAQVLGNLVDNAARATGGTGTVRVTLDEDDGEAVLVVEDDGPGIPLVDRQRVFDRLVRLEGSRDVRSGGAGLGLPIARGIATAHDGTLVHGDDGTLGGARFVLRLPVAGRSVDPVPGADRTVGRAPASATMGT
>NZ_CP027869.1|WP_137767410.1|1885848_1886406_-|MOSC-domain-containing-protein
MSAIQEPGRIVAVARDTEHRFSKPVVEEITLVAGWGVEGDAHAGTTVQHRSRVARDPSQPNLRQVHLLHAEVFDEVAAAGHVVVPGDMGENVTTRGVDLLGLPTGTLLHLGDEACVRVTGLRNPCQQINDFDPGLLRAVLGRAEDGTVERKGGVMGVVVTGGVVRAGDAVRVELPAGEPQPLEPV
>NZ_CP027869.1|WP_022903868.1|1884805_1885411_-|response-regulator
MSDTEATPAAPRRVVVAEDESLIRLDIVEILRDNGFDVVGEAGDGETAVQLATDLRPDLVVMDVKMPQLDGISAAEKLSKNHIAPVVLLTAFSQKDLVERATEAGALAYVVKPFTPNDLLPAIEIALSRHQQIITLEAEVADLVERFETRKLVDRAKGLLNEKMGLTEPEAFRWIQKASMDRRLTMHDVAKAIIEQLSAKK
>NZ_CP027869.1|WP_137767409.1|1884041_1884512_-|GNAT-family-N-acetyltransferase
MDDVVIRASRSADMSAVADLRWRWSVDEDGRAPTVTPEEYREAMTAFADEHADSHRCVVAERGGVVLGMAWLALNARPPVPHRPRGRVAAELQSVYVHPDLRGGGVANDLVAALLDVADEAGAERVVVHSSVVGERLYRRLGFGDARLLLQRPPED
>NZ_CP027869.1|WP_137768745.1|1883657_1884026_+|hotdog-fold-thioesterase
MGELATKMGMEITELTAERAVGSIPVEGNRQPVGLLHGGAYVVLAESLGSMAANVHAGPGHYAVGIELSASHSRSATSGRVTGTCTAIHLGGTLTTHEIVLTDDEGRRCSTVRITNMIRERR
>NZ_CP027869.1|WP_137767408.1|1880883_1883556_-|DNA-polymerase-I
MSDSAKPTLMVIDGHSLAFRAFYALPVDSFVNREGQHTNAIHGFISMLLMLLQREKPTHLAVAFDISRFSFRTREYEDYKGTRSETPPEFKGQIPLLQQALEAMGITTVTKEDYEADDILATLARQGSEQGYQVYVVSGDRDSIQLVNDDVTLLYPSVRGVSELTRYDRDKVYERYGIEPHQYPDIAALVGETSDNLIGIDKVGEKTAVKWITAYGSLDGVLEHADEIKGVVGNNLREQKDRAIRNRRLNRLVNDVELPVGPGDVALRPLDEQAVRDLFAKLQFRTLLDRVFKVAGTGEPSEAADAPGSVDNGAPTPPKVTTVIDEELGYWLERKGANDAENGFGVAVEVIDGRLSAIGIATHDDAVLVPGGSGAKDYEQLAAWFASDAPKHFHDAKAAIKALGTVGITVNGIAGDARITGWIAQPGKQGQPLADLVYQELGEELPTADPNQLVPETEPVNVGVHAWYVLRVDTALRSRVDESSLRVLDTIELPLVPVLAGMETIGVGIDRPVLTGLSHDLGERAAELAQQAFAEIGHEVNLGSPKQLQEVLFTELAMPKTRKTKTGFSTDAASLADLQEQHPHPFLGLLLQHRDATKLRQIVDTLDAAVVDGRIHTRYEQTGTSTGRVSSTDPNLQNIPVKTAVGRRIRSAFAVAEPYTTLVTADYSQIEMRIMAHLSGDPGLIQAFNEGEDLHRFVGARVFSVEPADVTPEMRTKVKAMSYGLAYGLSPFGLSKQLRIEQSEARTLMNEYFARFGAVRDYLRGVVEQAREDGYTETIFGRRRPFPDLKSPNRVLRENAERAALNAPIQGSAADIMKIAMLGVDEDLREGSLESHLLLQVHDELILEVAPGEQERVEEILRTRMGAAAELSVPLDVSVGVGPNWEAAAH
>NZ_CP027869.1|WP_137767407.1|1878745_1880425_-|DUF885-domain-containing-protein
MSEDRPVRQPSAVDRVAEDWVSTLVDLDPTVATYIGVPGRTDGYGDTSPAGADAMADAARSARRALDAAEATDDVDRVTKTDLGAELDLVVESHERKLHLRDLNVIASPAQEFRDVLDLMPTATTDDWQDVAGRLHALPDALEGYRETLLQGTREQVTPAKRQIELIAEQAARNGAADGFFRQLVDGAALEGGAPIPDALRAELVRGAEVAAAAYRSFGGFLEHELLPLATPVDAVGREDYELHSRRFLGAVVDLDETYEWGIEELARMRDEQERIADRIESGASVARAIEVLDADPARVLHGTDALQRWMQETSDASIRAMDGRYFDIADPIKRLECRIAPTQEGGIYYTGPSDDFSRAGRMWWSVPQGVTEFGTWREKTTVYHEGVPGHHLQISQAVYNRGELNTWRRQLAGPSGHVEGWALYAERLMEQLGFLDDDGDRLGMLDGQRMRAARVVLDIGVHLQKTNPDGGGWTWEYALDFMGQNVNMAPEFVQFEVARYFGWPGQAPSYKVGQRVWESIRDELAAREGAAFDLKAFHHRALALGGVGLDTLRSALLG
>NZ_CP027869.1|WP_058727787.1|1877019_1878489_-|30S-ribosomal-protein-S1
MTTTTTKAPKQVAINDIGSADDFLAEVEKTLKFFNDGDLISGTVVKIDRDEVLLDVGYKTEGVIPSRELSIKHDVDPNEVVEVGDEVEALVLQKEDKEGRLILSKKRAQYERAWGDVEKIKESDGVVTGTVIEVVKGGLIVDIGLRGFLPASLIELRRVRDLTPYLGQELEAKILELDKNRNNVVLSRRALLEQTQSESRTTFLNNLHKGQVRKGIVSSIVNFGAFVDLGGVDGLVHVSELSWKHIEHASEVVEVGQEVTVEILEVDLDRERVSLSLKATQEDPWQVFARTHAIGQIAPGKVTKLVPFGAFVRVADGIEGLVHISELSNKHVELAEQVVSVGDEVFVKIIDIDLDRRRISLSLKQANEGVDPEGTEFDPALYGMPTEYDDQGNYKYPEGFDPETNEWLEGYDTQRTEWEAQYAAAQSRWEAHKAQVAKTIADEEKGGFDLPASASSSSSSSFSSESNGQGTLADDASLAALREKLSSNN
>NZ_CP027869.1|WP_137767406.1|1876327_1876930_-|dephospho-CoA-kinase
MRIIGLTGGIAAGKSTVSRRWAEHGAVVVDADQLARQAVSPGSPGLARVADRFGPGVLAPDGSLDRPALGSIVFADAAARKDLEAITHPEVWRLAQQAFDQAEAADPDAVVVYDVPLLAEARGSRPIRFDAVVVVDAPAALRVERLVTHRDLPRAEAERRVAAQASDAERLALADHVVDATGSLADTLRSADEVWERIAG
>NZ_CP027869.1|WP_137767413.1|1890162_1891239_-|rubrerythrin-family-protein
MSLQDDRPTAPTAADVRRWRRYLADERAEAAVYRNLSTRRSGEEREILAALADAEGRHEQHWLDLLGDDVGRPLRGSLRTRVLAALAKRFGSVFVLALMQRAEDRSPYADDDDATARMAADERIHGEVVRGLANRGRMRLSGTFRAAVFGANDGLVSNLALIIGISASGADRHFVLLSGIAGLLAGALSMGAGEYVSVRSQRELLDASAPHPEAGRAVADLDVDANELALVYRARGMDEAAAQAHAAEVLGGRTVTAAAATDEHEAVGSGTSAAVSSFCFFASGAIIPVLPYLFGLEGWPAIVLAAVLVGIALLGTGAVVGVLSGASPLKRALRQLAIGFGAAVVTYGLGLLFGTGSA
>NZ_CP027869.1|WP_058729696.1|1891640_1893086_-|pyruvate-kinase
MRRAKIVSTLGPATSDYETVKEIIEAGVDVARLNLSHGDYSVHEANYENVRRAAADLGKPVAILVDLQGPKIRLAKFADGPHELAVGDVFTITTEDVPGSKEICGTTFKGLPQDVKPGDPLLIDDGRVRLRVLDTDGVRVRTEVVVAGTVSNNKGINLPGVAVNVPALSEKDEADLRWAIRQGADLIALSFVRNAADVDRAHEIMDEEGKRLPIIAKVEKPQAVDALEEIIDAFDSIMVARGDLGVELPLEAVPIVQKRAVELSRRMAKPVIVATQMLESMISSPIPTRAETSDVANAVLDGADAVMLSGETSVGEYPVQTVRTMARIVESTEDHGLERIAPLGTKPRTLGGAITLAAVEIAEFTEASYLCVFTESGDSARRMSRLRHGLPIIAFTPNEATRRRMALTWGVRSFLVERKTHTDELFSQVDDVLLANGLAAPGDRVIVTAGSPPGLEGSTNDLRVHRVGDAHAEAAPAYVRD
>NZ_CP027869.1|WP_137767414.1|1893225_1894683_-|glutamate-synthase-subunit-beta
MADPKGFLKVQERELPPRRPVPVRLMDWKEVYEQQESGALKRQAGRCMDCGVPFCHQGCPLGNLIPEWNDLTWRGEGRQAIERLHATNNFPEFTGKLCPAPCEASCVLGINQPPVTIKQVEVSIIDEAYKNGWVTPHPPERLTGKTVAVVGSGPAGLAAAQQLTRAGHTVAVYERDDRIGGLLRYGIPDFKMEKRQIDARLAQMQAEGTRFRAGVEIGVDITWDDLKSRYDAVVVATGATVPRDLPIPGRDLAGVHYAMEYLVQQNKANAGTTVDNQVTAEGKHVVVIGGGDTGADCIGTAHRQGALSVTNLAIGKQPPLERPSEQPWPMFPTVFEVTSAHEEGGERHFLASTVEFLGNAAGEVRALRVAETEYLDGRRVPKAGTEREIPADLVLIAMGFTGPETDTIEPQLGLPTTVSGAVARQADYSTNEPGVFVAGDAGRGQSLIVWAIAEGRAAASKVDAYLEGSTILPAPVKATDRALTV
>NZ_CP027869.1|WP_137768747.1|1894742_1899308_-|glutamate-synthase-large-subunit
MQQAHRRFSAVPEATGAYDPANEKDACGLAMVATLRGTAGHDIVDAALGALRNLEHRGAVGSDAGTGDGAGILCQVPDAFLRDEVDFDLPAAGEYAVGTAYLPVDEDERHAVKGAVERIAREEGLKVLGWREVPVRPDVLGTLARAAMPAFEQLFVASTRHDVHGAAWSGIALDRQAFRLRKRAEHGVEVYFMSLSSRTMVYKGMVTTLQLEPFYPDLSDERFASKLAIVHSRYSTNTFPSWPLAQPFRTLAHNGEINTVRGNRNWMRARQSQLESELLGDLAPLLPIVSPGASDSASFDETLELLTLTGRSLPHAVSMMVPEAWENQVGMDPDLRAFYEYHSMLMEPWDGPAAITFTDGAVVGATLDRNGLRPGRFLVTDDGLIVMGSETGVIDVPPAKVVRKGRLRPGRMFVVDTEAGRIIEDDEVKRELATSGPWAQWLDEGRINLSDLPEREHIVHTPASVTRRQRAFGYTEEEVRILLRPMAQTGAEPLGAMGSDTPIAVLSERPRLLFDYFTQQFAQVTNPPLDSIREQVITSMGMGLGPERNLLSAGPEHAKQIVLDFPVIDNDELAKIQHFETESGRHLTVTIKGLYRVDAGKKAMQKRIAAVCDEVDQAIESGKQFIVLSDRDGNAEQAPVPSLLLLAAVHHHLIRTEQRMKVGLIVEAGDVREVHHVATLIGYGASAINPYLAMETCENLVRSGMITGITPEQAVKNVIKALGKGVLKIMSKMGISTVSSYAGAQAFEAVGLSQEFVDRYFTGTSSILGGVGIEVIAKENAERHAQAYPQDGAVLSHERLQTGGEYQWRREGPPHLFNPDTVFRLQHATRARRYDIFREYSQAVDDQSEELMTLRGLFRFRHGVRKPIALDEVEPIESIVKRFNTGAMSYGSISQEAHETLAIAMNRLGARSNTGEGGEDVERLLDPERRSAIKQVASGRFGVTSMYLTHATDIQLKMAQGAKPGEGGQLPPTKVYPWVARTRHATAGVGLISPPPHHDIYSIEDLKQLIFDVKRANPSARVHVKLVSQSGIGAVAAGVTKALADVVLVSGHDGGTGASPLNSLKHAGTPWEIGLAETQQTLMLNGMRDRVVVQVDGQMKTGRDVVVAALLGAEEYGFATAPLVVEGCILMRVCHLDTCPVGVATQNPELRKRFTGKPEFVVNFFEFIAQEVRELLAELGFRSLDEAIGQVDALDTDRAIEHWKASGLDLAPVLHGPEFARDEPRRHVREQDHELDEHFDVQLIAQTADVLEHGGSVALDLPIRNTERAVGTMLGHEVTLRHGEHGLPAGSIDVTLRGSAGQSLGAFLPAGITLRLVGDSNDYVGKGLSGGAIVVRPDTESGFDPSENVIAGNVIGYGATQGSMFIRGIVGERFLVRNSGATAVVEGVGDHALEYMTGGLALILGETGRNLGAGMSGGTAYVRGLRREHVNADALATGELRLEELDSADVEIVTDLLRQHLAETGSTVAGDLLESGDLGDFVKVLPRDYAAVLATRQQAVDEGLDPDGTVVWNRILEVTGG
>NZ_CP027869.1|WP_137767415.1|1899564_1900560_-|prolipoprotein-diacylglyceryl-transferase
MPLLSIPSPSTAWQYFDLTAWVRDVFGLSLPLDFRIHAYAICILLGIVAAVVLANRRLNARGVERWIIIDIAIWAVPAGIIGGRLFHVFTHVSDYFGPGRDPLSFLYVWEGGLAIFGALILGSLGAYIGCRQVGLRFSTLIDAIAPGVLLAQAFGRLGNYFNHELFGMPTSLPWGLEIESTNAAFPKGLPEGTLFHPTFLYEIIWNVVGVVVILLLDKRFRLQWGKVMALYLIWYGTGRSVLESIRVDTSETFFGIRTNVWMSFAAILLGIVIFLVQTRRHTGAEPSPYLPGREPRRTSDVDSDDTWSEHDDDAPATDVDADPVPAAGRAR
>NZ_CP027869.1|WP_137767416.1|1900761_1901565_-|tryptophan-synthase-subunit-alpha
MTNTETNRSVATTIDTANAERAGAVVGYLPAGFPDLQTSVDAAVALAENGVDVIELGLPYSDPVMDGPVIQRAAEESLANGFRVAQVFDAVDQITNRVDVPVLVMTYWNPVLRYGVDRFADDLVSAGASGLITPDLIPDEGRAWIDASERTGLDRVFLAAPSSTDARMEQAVHSSRGFVYAVSTMGVTGARVGVDTAARTVVSRLRDAGVERTCVGLGISTADQVREVLEYADGAIIGSAFVRALADLGVQGVADRAADLTSGAVRG
>NZ_CP027869.1|WP_137767417.1|1901561_1902776_-|tryptophan-synthase-subunit-beta
MTSLRDLQGPYFGDFGGRFVPESLVLALDELETAFREAWADPAFRAELDTLQREYTGRPSIITEAPRFAQHAGGARIILKREDLNHTGSHKINNVLGQALVAKRLGKTRLIAETGAGQHGVATATAAALFGMDCVVYMGAVDTERQALNVARMRLLGAEVIPVETGSRTLKDAINDALRDWVANVDSTHYLLGTVAGPHPFPEMVREFHKVIGEEARQQVLDRVGRLPDAVAACVGGGSNAMGIFEAFLDDESVRLHGFEAGGDGIETGRHAASISLGRTGVLQGTMSYLMQDEDGQTIESHSISAGLDYPSVGPEHAYLASIGRAQYSPVTDTEAMEAFRLLARTEGILPAIESAHALAGAITLGKELGPDGVVLVSLSGRGDKDVASASRYFGILDENAVQL
>NZ_CP027869.1|WP_137768748.1|1902838_1903639_-|indole-3-glycerol-phosphate-synthase-TrpC
MLETLVAGALEDAAARRADRPTAEVERDLDRVASPLDALAFLAPGDRVKILAEVKRASPSRGSMAPIEDPAALAADYERGGASTISVLTEGRKFLGSLADLEAVKARVSLPVLRKDFIAEPYQVLEARAAGADLVLLIVAALEQRQLVELHELAEQLGMRVLVEAHSGDEVARGLDAGARILGVNARDLTDFSLDRDLFGSLADRIPDGVVRVAESAVAGPADVAHYRAAGADVVLVGEALVTGADPATTLASFIAAADGSGRPRA
>NZ_CP027869.1|WP_137767418.1|1903653_1903893_-|hypothetical-protein
MSNTEPAELGEGHSPAAWTAVVIMLIGFAAGTLFFWFDVAWGVWASAAVVVIGLVVGAVMAKAGYGVNGPKFVPKHHSE
>NZ_CP027869.1|WP_137767419.1|1903889_1904690_-|Trp-biosynthesis-associated-membrane-protein
MKRSRPLVVVAGLAVAGIVMLAWTQTWFTVHLHAGTAVVPRVVADGAAVVPQYTALAIASLALFLALTIAGRVLRVVLAAVEVLLGLAVVATGIGALADPVAASKGAVGEVAGVSDTAAVRQVVDRVDVTAWPAVGIAGGVLAVVLGIVVFVVQRNWPGPTRKYAAATAGAAADARAAAPTQRDAITDWDDLSAGDDPTAGPVAGPAEPSVGTAGAPAAAPAAGHGGDATAATPGVGAVGESPTTDTVGSERRRSDDGAGAERGAP

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Crispr_ID: NZ_CP027869_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_11

1952033-1952109

Orphan

Consensus_repeat	Method
CCCATGCCCTGGTTCGACGCGTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_11

>merge|NZ_CP027869|11|1952033-1952109|CRISPRCasFinder
CCCATGCCCTGGTTCGACGCGTACGGGTTGTTGCCGGGACGCGGCGGGCGCGAGCCCATGCCCTGGCTCGACGCGTA

>NZ_CP027869|11|11|1952033-1952109|CRISPRCasFinder
CCCATGCCCTGGTTCGACGCGTA	CGGGTTGTTGCCGGGACGCGGCGGGCGCGAG
CCCATGCCCTGGCTCGACGCGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137767456.1\|1958040_1959525_-\|allantoin-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP027869.1\|WP_137767449.1\|1947730_1948177_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137767457.1\|1962246_1963218_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|365980
NZ_CP027869.1\|WP_137767451.1\|1949285_1949732_-\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP027869.1\|WP_137767450.1\|1948247_1949147_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP027869.1\|WP_137767454.1\|1954430_1956185_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_CP027869.1\|WP_137767447.1\|1946357_1946723_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768756.1\|1943597_1944779_+\|DUF349-domain-containing-protein	unknown	unknown	gnl\|CDD\|377186
NZ_CP027869.1\|WP_137768759.1\|1961052_1962177_-\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|235472
NZ_CP027869.1\|WP_137767444.1\|1942591_1943398_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238194
NZ_CP027869.1\|WP_137768755.1\|1941073_1942462_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP027869.1\|WP_137767446.1\|1945840_1946281_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137767455.1\|1957468_1958044_-\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|376404
NZ_CP027869.1\|WP_137767453.1\|1953174_1954170_-\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
NZ_CP027869.1\|WP_137768757.1\|1956284_1957418_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|234737
NZ_CP027869.1\|WP_137767458.1\|1963224_1963701_-\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|224678
NZ_CP027869.1\|WP_137768758.1\|1959572_1960892_-\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100084
NZ_CP027869.1\|WP_137767445.1\|1944869_1945832_-\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP027869.1\|WP_137767448.1\|1946719_1947682_-\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235113
NZ_CP027869.1\|WP_082687788.1\|1952757_1953075_-\|YlxR-family-protein	unknown	unknown	gnl\|CDD\|377288

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137767456.1\|1958040_1959525_-\|allantoin-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	2.3088e-40
NZ_CP027869.1\|WP_137767457.1\|1962246_1963218_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|365980	pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase.	3.08232e-26
NZ_CP027869.1\|WP_137767453.1\|1953174_1954170_-\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	2.26254e-168
NZ_CP027869.1\|WP_137767450.1\|1948247_1949147_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	2.51599e-87
NZ_CP027869.1\|WP_137767454.1\|1954430_1956185_-\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP027869.1\|WP_137768756.1\|1943597_1944779_+\|DUF349-domain-containing-protein	gnl\|CDD\|377186	pfam03993, DUF349, Domain of Unknown Function (DUF349). This domain is found singly or as up to five tandem repeats in a small set of bacterial proteins. There are two or three alpha-helices, and possibly a beta-strand.	3.10915e-12
NZ_CP027869.1\|WP_137767445.1\|1944869_1945832_-\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	8.59381e-125
NZ_CP027869.1\|WP_137768759.1\|1961052_1962177_-\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NZ_CP027869.1\|WP_137767444.1\|1942591_1943398_+\|peptidylprolyl-isomerase	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	1.58781e-25
NZ_CP027869.1\|WP_137768755.1\|1941073_1942462_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP027869.1\|WP_137767455.1\|1957468_1958044_-\|isochorismatase-family-protein	gnl\|CDD\|376404	pfam00857, Isochorismatase, Isochorismatase family. This family are hydrolase enzymes.	4.4193e-25
NZ_CP027869.1\|WP_137768757.1\|1956284_1957418_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0
NZ_CP027869.1\|WP_137767458.1\|1963224_1963701_-\|OsmC-family-peroxiredoxin	gnl\|CDD\|224678	COG1764, osmC, Organic hydroperoxide reductase [Secondary metabolites biosynthesis, transport and catabolism].	1.42013e-20
NZ_CP027869.1\|WP_137768758.1\|1959572_1960892_-\|site-2-protease-family-protein	gnl\|CDD\|100084	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog RseP is involved in the sigmaE pathway of extracytoplasmic stress responses. Also included in this group are such homologs as Bacillus subtilis YluC, Mycobacterium tuberculosis Rv2869c S2P, and Bordetella bronchiseptica HurP. Rv2869c S2P appears to have a role in the regulation of prokaryotic lipid biosynthesis and membrane composition and YluC of Bacillus has a role in transducing membrane stress. This group includes bacterial and eukaryotic S2P/M50s homologs with either one or two PDZ domains present. PDZ domains are believed to have a regulatory role. The RseP PDZ domain is required for the inhibitory reaction that prevents cleavage of its substrate, RseA.	1.83509e-43
NZ_CP027869.1\|WP_137767451.1\|1949285_1949732_-\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	6.51984e-45
NZ_CP027869.1\|WP_137767448.1\|1946719_1947682_-\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	1.66307e-105
NZ_CP027869.1\|WP_082687788.1\|1952757_1953075_-\|YlxR-family-protein	gnl\|CDD\|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	9.29063e-21

>NZ_CP027869.1|WP_137767451.1|1949285_1949732_-|30S-ribosome-binding-factor-RbfA
MADPQRARKMADRIKEVVARRLDKGLRDPRLGFVTITDVRVTGDLQHASVFYTVYGSDEERADSAAALKAATGMLRSEVGKNITARLTPSLEFIADALPETSAHMEDLLVQAQQRDAQVRAASAGAQYAGDADPYKHDDQDEERGERA
>NZ_CP027869.1|WP_137767450.1|1948247_1949147_+|A/G-specific-adenine-glycosylase
MEDPTDPSRPDIASPLVAWFRTEARDLPWRRPGFPAWGTLVSEIMLQQTQVARVVPRLEAWLTRWPTPADLAASPPGEAVRAWDRLGYPRRALALHAAATAIAEQHDNVVPRDVDALLALPGIGDYTARAVAVFAYGDRHPVVDVNVRRVLARAVLGEGEPGPAKARRDLPLMESVLPEDREAAAATNAAVMELGALVCVARSPACDVCPIADRCAWRAAGYPEHDGPRAPKQARFAGSDRQVRGLVMAELRASDVPVTRDEVDLVWPDAEQRARALASLLHDGLVVGDDASGYRLPDA
>NZ_CP027869.1|WP_137767449.1|1947730_1948177_-|hypothetical-protein
MARWAPQETDTMAAIAGEVIAQVGTNRTVVGIDGQDGTDLERVAAALVAAFQQHGVSAMAAAAPSADLDVLRADVVTPFRTTGAGDGVLVVHGQGLLASGTRNLWRWSLWVEQEDGRLERRADVKIAASAVLDVTDPDHPRREWNDAC
>NZ_CP027869.1|WP_137767448.1|1946719_1947682_-|tRNA-pseudouridine(55)-synthase-TruB
MVAPQPDGILLVDKPQGISSHRVVSIARRRLGLKKIGHAGTLDPMATGLLLLGAGPSTRLLTHLVGLGKTYTATIRLGVGTDSDDADGTPTSAAGVAAADVSDDAIERAVAAQRGVIDQVPSTVSAIKVDGRRAYDLARKGEEVVLRSRTVTVSRFVVTGRDDHTVTVDGVDVPVVDLDVVVDCSSGTYVRALARDVGAALGTGAHLTALRRTAVGPFDVADAVDLEDDSVDVAAALARPADVARRLFDVVALDAAAAKDLTDGKRVAVEHPDHDGPVAAVAKDDDRLVGLVSVRRGRLRVITNFPAPAPVGTTTDGAHA
>NZ_CP027869.1|WP_137767447.1|1946357_1946723_-|hypothetical-protein
MIEWFMWVQLAVSVVAGLFAVVVGFLGWKPNDYTVGSLALIELLLLAQGVVSLVLPAVGSPPQGNALEFGVYAVSVLLVPPAAILWALIDRTKWSTVVLGAGAFTVAVMVYRMYQIWFALN
>NZ_CP027869.1|WP_137767446.1|1945840_1946281_-|hypothetical-protein
MANRSSLATGVGRVLIAVYGILALAATGRSVVQIIEKFSFAPFAYTLSAVAAVVYIVAMIALIAPGRAWYRVACVTIGFEMAGVLIVGTLSLIDRQLFPDDTVWSYYGLGYVFAPLVLPIAGLWWLRKHHRAAAVEPAAASVTVGE
>NZ_CP027869.1|WP_137767445.1|1944869_1945832_-|bifunctional-riboflavin-kinase/FAD-synthetase
MQYYDDVADVAQGFGPSAVTIGKFDGVHVGHRAVIAHLERAARERGLVSTVVTFDRHPLSVIDPDRVPPALTSTAQRRELLEEIGVDAMLLLRFDQDLQSQAPEAFVSEVLVRTLHAELVFVGSDFRFGARGAGDVNLLRRLGEQHGFRVELIDDVDLRDDVRPSDERRVSSTWIRELLGDGRVAEAARLLGREHAVRSTVVHGNQRGRAMGYPTANLDPACEGFVPADGVYAARVLHEGTVYPAAVSVGNNPTFQGVPAKQIEAHLLDVDIDLYGDTISVLFVSYVRGMVAFSSMDELAAQMRQDDLDIRLLLGLPAPV
>NZ_CP027869.1|WP_137768756.1|1943597_1944779_+|DUF349-domain-containing-protein
MYVRYDDGEKAVGEYPDATPDEALAYFARKYADLEGQVKIAEQRVQRGASANDVARTVEHLRTQVAEARVVGDLKSLENRVAALSEQVGSLTKEQQAQAQQALTDALAYRTSLVEEAESLAAVDPARAQWKQITAQLDDVFARWQQHQHDGPRLPKNEANELWKRFRAARSTVDQHRRAFYSELDAQHRDARNRKQELVQQAEALASRGSDGIPAYRELLDDWKRAGRAGKRHDDALWARFKAAGDVLFEQRHAEAAVENEEFSANLVAKQALLTEAEPLLQQKDRVAARRTLTDIQRRWDEIGKVPRGDVRRIEDRLRAVEDHVRSLEDEHWKASDPERKARQTGLASQLEDAIGKLQAELEAAQASGDSRKIKEAQEALDARKIWLDALGS
>NZ_CP027869.1|WP_137767444.1|1942591_1943398_+|peptidylprolyl-isomerase
MAPKNQARDNREARERLRLYQARQGLHDRQRRRRVRDDVVGVGVLVLVAALATGSQLAFAGSRAGDAPSASATSTPTPSASATAGNTGTVPSKDIADGATWTGTLTLNKDVRLGIELDGKAAPQASSVEIDLIRKQFYEGTTCHRLADSADFRFLQCGSANGDGTGDAGFQYGPLENVPSDGRYAAGTLAIARGASPYSQSTQFFIVYGDTTLDGSTGGYTVVGKVTSGLDDLEREITSKGIASAGSDGTGEPKVATTITGATIREQD
>NZ_CP027869.1|WP_137768755.1|1941073_1942462_-|replication-associated-recombination-protein-A
MRAPTTGGRAGLAQGSVPLAVRMRPTSLDEVAGQQHLLGRGSPLVQLATGTRENPGGVSVILWGPPGTGKTTLAQAIARQSGREFVELSAVTAGVKDVREVMEKALTHRDLYGSTTVLFLDEIHRFSKAQQDALLPGVENGWVILIAATTENPSFSVISPLLSRSLLLTLKPLTDEDLGMLVDRAVEDPRGLGGSVVLGDDARAAIVRLSSGDARRALTALEAAASSAIAAAASDTDDDDDELSPDDVATVPLVDADTVAAAVDRALLRYDRQGDEHYDVISAFIKSVRGSDVDAALHYLARMIEAGEDPRFIARRIIISASEDIGMADPQALPIAVAAAQAVQLIGMPEGRIPLAEAVVYLATAPKSNASYNGVNAAVADVKAGRMGVVPVHLRDAHYPGAKRLGHGKGYVYSHDAEHGVARQQYLPDALEGTEYYTPTGNGYEREVGPRLERLRRITRGE
>NZ_CP027869.1|WP_082687788.1|1952757_1953075_-|YlxR-family-protein
MVVPVRTCIGSRRRAPRSSLLRVVALSDGRVVADPKAVMPGRGAWLTPTVEAHDQAVKRRAYRRALRLDREPDTSAVRDYLEALSAEEQARHRDTTEQAERLMDN
>NZ_CP027869.1|WP_137767453.1|1953174_1954170_-|transcription-termination/antitermination-protein-NusA
MKIDLAVLRLMEREREIPFDELVRIIESAILTAYQKHRAENDEPVDAQSRVELDRKSGEVSVYVPERDEDGTVVGEAVDQPSDFGRIAAFAAKQVINQRLRDIGDDKILGQFRGKEGDIVAGVIQQGPNPKMVHVDLGTVEAILPPEEQVPGEEYKHGNRIRVYVTSVGRGAKGPQITVSRTHPGLVRKLFALEVPEIASGVVEITSIAREAGHRTKLAVKANEPGVNAKGACIGELGARVRAVTTELGAEKIDIVDYSSDLASFVASALSPAKVTSAFVLDASTKAVRALVPDYQLSLAIGKEGQNARLAAKLTGARIDIQPDSILDGDE
>NZ_CP027869.1|WP_137767454.1|1954430_1956185_-|proline--tRNA-ligase
MVTRLSHLFLRTLRDDPSDAEVTSAKLLVRAGYIRRQAPGIFAWLPLGLRVRARIEGIIRDEMVAAGAQEVLLPALAPREPYEATNRWTEYGDGIFRLQDRKGADYLLAPTHEELFALLVKDLYSSYKDLPVTLFQIQDKYRDEARPRAGLLRGREFTMKDAYSFDIDDAGLDRSYQTMRDAYERIFARLGLEYAIVKADAGAMGGSKSEEFLHPIAVGEDTFVRSAGGYAANVEAYVTPVPESLPIDGQPEPVLLPAADTPTIDTLVAHANAVAPRDRAPWTAADTLKNVVLALTHLDGTREVVVVGLPGDREVDLKRAEVAFAPAEVEAAGDDDFRKHPGVFVKGYIGPQVLGADSPSGIRYFVDPRVVDGTAWITGANERGVHVSGLVMGRDFTADGVAEVSDVRAGDPAPDGSGPLETARGMEIGHVFQLGRKYAEALGLKVQDENGKLATVTMGSYGIGVTRILAILAEAHNDEKGLVWPKNVAPFDVHVVATGKDDVAYDLASSIVETLEGDRFEVVYDDRPKVSPGVKLRDAELLGMPVVVVAGRNAADGVVELWDRASGERRDVPVADLLEAVRAI
>NZ_CP027869.1|WP_137768757.1|1956284_1957418_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MPKVPETLSPRRKSRQIRVGKVLVGGDAPVSVQSMTTTPTTNINATLQQIAELTASGCDIVRVAVPSQDDADALPIIAKKSQIPVIADIHFQPKYVFQAIDAGCAAVRVNPGNIRKFDDQVGAIAKAAKDAGVSLRIGVNAGSLEPSLLQKYGKATPEALVESAVWEASLFEEHDFHDFKISVKHNDPIVMVKAYRQLAAAGDWPLHLGVTEAGPEFQGTIKSATAFGILLAEGIGDTIRVSLSAPPAQEVKVGLQILQSLNLRERKLEIVSCPSCGRAQVDVYQLANDVTKGLEGMTVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIKTVPEREIVATLIEEANRIADEMGPAAATGSVQVITAP
>NZ_CP027869.1|WP_137767455.1|1957468_1958044_-|isochorismatase-family-protein
MSVVVPADAWLVAIDLQRVFTGDSPWSTPRYDEAAAGTARLLPHFAGRTVFTRFVAPERPQGAWVPYYREWSFALVPDTDPLYDLTAPFAAAVTDHGTPVVTEPTFGKWGTSLRAVVGDRPHLVLTGVSTDCCVVSTALAAADAGARVTVVADACAGASDEDHERALALMRLYAPLITVVERGTDLVTDQV
>NZ_CP027869.1|WP_137767456.1|1958040_1959525_-|allantoin-permease
MSTAPEVRAVERQGIDVIAESDRKGRPRGLFWPWFAANVSVLGLSYGSFVLGFGISLAQATIVSVVGVAFSFLLCGIVAIAGKRGSAPTMVLSRAAFGVRGNRLPSFLSWVLTVGWETALASLAVLATSTVFRELGWDDGVVTKLVALVVVAALVVGAGIAGFDVIMRLQTVITVVTAVLTVVYVVLAAPSIDLGTLGALPAGSAQNVIGALVLVMTGFGLGWVNAAADYSRYLPRTSSTGGVVWWTTFGGALAPAVLVVVGVLLAGSSKDLDDAIGADPIGALTTILPVWFLVPFAIVAILGLVGGAVLDIYSSGLALLSAGVRIPRPVAAGVDGVFMVAGAVYVVFFAKDFISPFQAFLVTLGVPIAAWAGVFVADVVLRRRAYADAELDDVRGRYGDVRWAAIGLVVLGTVLGWGLVTNTYGVPAWLNWQGYLLGPFGLGGREGAWAYANLGVLVALVVGFAGTLLTARGSVRRQEAQPAQRTVPVRQDQP
>NZ_CP027869.1|WP_137768758.1|1959572_1960892_-|site-2-protease-family-protein
MLLFVLGVVVFIVGLLVSIGLHELGHLTFAKLFGVKVTQYSLGFGKAIWSFRRGETEYGIRPILLGGYISMVGMLKPRASGKPNAITNTGMYGAFVQDARQASAEQIADSGGDDSRAFYRLTPWKRIIVMVAGPAMNLVIGIVLFGVLLCGFGAPTTTFTSSVDCVLPTSSATRCTPGDAESPAKQAGIRDGDVVLAVDGQQDPTIAEVSRVFQRSAGESVTVVVERDGQRRTLEVTPQLATRDVVTEQGTVAKNADGTTKTQRVGVVGVSIGQSLVRQSPAAVLPATGAQIAASAHLIIDLPQRLVAVWNAAFGAQERSQDSPVSVVGVGRAIGEVSSMSGVPVVDKAYTILGLLASLNIGLFVLNMVPLLPLDGGHIAGALWEAVKRRAYVLVGKPDPGAIDLAKTMPLTMVVVVLLAGMSALLIYADIVRPVNLFG
>NZ_CP027869.1|WP_137768759.1|1961052_1962177_-|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MPTTAGRGTDVTAAPTRRRIVVLGSTGSIGTQALDVVARNPDRFEVVGLTAGTNRDLVAEQAARFGVRDTAFGAVDAERLVRTVAADVVLNGITGSVGLGPTLAALETGSTLALANKESLIVGGPLVQAAARPGQIVPVDSEHSAIAQALRSGAGSEVRRLVLTASGGPFRGRSRESLRDVTPAQALAHPTWDMGLVVTTNSATLVNKGLEVIEAHLLFDVPYDRIDVTVHAQSIVHSMVEFVDGSTIAQASPPDMRLPIALGLAWPDRVPGVGVPLDWTTASTWTFEPLDTEAFGAVDLAKHVGGLGGTFPAVFNAANEQAVAAFHAGAIGFLDIVDTVRRVVDVHIAGEPSLDGVLAAERWARTEADRLLAR
>NZ_CP027869.1|WP_137767457.1|1962246_1963218_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MKRLRLLPIAIVPAVVLGLAACSGNGSGDASASPSASSSATATPISSCPESGSASKSIEVTGAVAGTEAPKVTFDKGLSAKTPQATTVVEGSGRALKDGEFAQVSYAVYKASDASKLGAVGFDQGNPQVLSVGGTGFGALLACTKVGDRVAVVGQSSALGFNTGGEIVVVADVVAQTPTKATGTPQTQDPSLPTVEDKADGEPEITIPSGATAPSKTEVEVLKQGDGATIENGDTALVQYKGVTLADGKEFDSSWSKGAPTTFTVSEGSLIKGFVTGLVGQKVGSQVLIVTTPEDAYGSNPPEGSGIPKDASLVFVVDILAKG
>NZ_CP027869.1|WP_137767458.1|1963224_1963701_-|OsmC-family-peroxiredoxin
MTDHTYEVSVRWTGDRGTGTSGYRDYGRDHDVTAAGKHPIAGSADPAFRGDRDRWNPEEMLLGALAQCHMMSYLYVAVRRGFTVVDYEDTATASLDVHRDGTGEVTEVTLRPVVTVLEADRVADAETAHAEANRLCFIARSVAFPVHHTPVTKVRAAG

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Crispr_ID: NZ_CP027869_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_12

2347581-2347674

Orphan

Consensus_repeat	Method
GTCGATCGACGCGTGCCGTGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_12

>merge|NZ_CP027869|12|2347581-2347674|CRISPRCasFinder
GTCGATCGACGCGTGCCGTGTCGCACGGTGCGCACGCATCGTCTGCAGGCGCATCGTCCGACGTCGCACCGGTCGATCGACGCGTGCGGTGTCG

>NZ_CP027869|12|12|2347581-2347674|CRISPRCasFinder
GTCGATCGACGCGTGCCGTGTCG	CACGGTGCGCACGCATCGTCTGCAGGCGCATCGTCCGACGTCGCACCG
GTCGATCGACGCGTGCGGTGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137767729.1\|2360824_2361166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768793.1\|2357516_2360321_-\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236048
NZ_CP027869.1\|WP_137767724.1\|2352024_2353518_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|200042
NZ_CP027869.1\|WP_137767715.1\|2336613_2338167_-\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
NZ_CP027869.1\|WP_066655121.1\|2341032_2341305_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NZ_CP027869.1\|WP_137767728.1\|2356872_2357520_-\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_CP027869.1\|WP_137767721.1\|2346036_2347458_+\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP027869.1\|WP_137767719.1\|2343336_2343942_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP027869.1\|WP_137767718.1\|2342323_2343334_+\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|234866
NZ_CP027869.1\|WP_137768792.1\|2347837_2349709_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP027869.1\|WP_137767717.1\|2341445_2342288_+\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197336
NZ_CP027869.1\|WP_137767726.1\|2354918_2355554_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|188483
NZ_CP027869.1\|WP_137767727.1\|2355704_2356847_-\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236134
NZ_CP027869.1\|WP_137767720.1\|2345096_2345753_+\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|238348
NZ_CP027869.1\|WP_058728882.1\|2340186_2340957_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP027869.1\|WP_137767722.1\|2349820_2351359_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NZ_CP027869.1\|WP_137767725.1\|2353644_2354652_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP027869.1\|WP_137767723.1\|2351355_2351976_-\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238493
NZ_CP027869.1\|WP_137767716.1\|2338269_2339925_-\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP027869.1\|WP_137768791.1\|2343999_2345100_+\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl\|CDD\|273015

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137768793.1\|2357516_2360321_-\|type-I-DNA-topoisomerase	gnl\|CDD\|236048	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated.	0
NZ_CP027869.1\|WP_137767724.1\|2352024_2353518_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|200042	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family. In E. coli, this protein is known as penicillin binding protein 4 (dacB). A signal sequence is cleaved from a precursor form. The protein is described as periplasmic in E. coli (Gram-negative) and extracellular in Actinomadura R39 (Gram-positive). Unlike some other proteins with similar activity, it does not form transpeptidation. It is not essential for viability. This family is related to class A beta-lactamases. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	3.68051e-36
NZ_CP027869.1\|WP_137767715.1\|2336613_2338167_-\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
NZ_CP027869.1\|WP_066655121.1\|2341032_2341305_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	2.99206e-26
NZ_CP027869.1\|WP_137767728.1\|2356872_2357520_-\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	3.35652e-92
NZ_CP027869.1\|WP_137767721.1\|2346036_2347458_+\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.20279e-170
NZ_CP027869.1\|WP_137767719.1\|2343336_2343942_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.47759e-20
NZ_CP027869.1\|WP_137767718.1\|2342323_2343334_+\|tryptophan--tRNA-ligase	gnl\|CDD\|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	0
NZ_CP027869.1\|WP_137768792.1\|2347837_2349709_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	5.12251e-150
NZ_CP027869.1\|WP_137767717.1\|2341445_2342288_+\|exodeoxyribonuclease-III	gnl\|CDD\|197336	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Neisseria meningitides Nape and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Neisseria meningitides Nape and NExo. Nape, found in this subfamily, is the dominant AP endonuclease. It exhibits strong AP endonuclease activity, and also exhibits 3'-5'exonuclease and 3'-deoxyribose phosphodiesterase activities.	1.46551e-113
NZ_CP027869.1\|WP_137767726.1\|2354918_2355554_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|188483	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator. Members of this family are TetR family putative transcriptional regulators that occur in genome contexts near proteins of the mycofactocin system. These include the precursor peptide (TIGR03969), a radical SAM peptide maturase (TIGR03962), and a putative carrier protein (TIGR03967). [Regulatory functions, DNA interactions].	1.94899e-08
NZ_CP027869.1\|WP_137767727.1\|2355704_2356847_-\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236134	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated.	1.42577e-150
NZ_CP027869.1\|WP_137767720.1\|2345096_2345753_+\|GTP-cyclohydrolase-II	gnl\|CDD\|238348	cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the precursor molecule for the synthesis of the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) which are essential to cell metabolism. The enzyme is present in plants and numerous pathogenic bacteria, especially gram negative organisms, who are dependent on endogenous synthesis of the vitamin because they lack an appropriate uptake system. For animals and humans, which lack this biosynthetic pathway, riboflavin is the essential vitamin B2. GTP cyclohydrolase II requires magnesium ions for activity and has a bound catalytic zinc. The functionally active form is thought to be a homodimer. A paralogous protein is encoded in the genome of Streptomyces coelicolor, which converts GTP to 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (FAPy), an activity that has otherwise been reported for unrelated GTP cyclohydrolases III.	1.70341e-100
NZ_CP027869.1\|WP_058728882.1\|2340186_2340957_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	2.3399e-88
NZ_CP027869.1\|WP_137767722.1\|2349820_2351359_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_CP027869.1\|WP_137767725.1\|2353644_2354652_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.36358e-60
NZ_CP027869.1\|WP_137767723.1\|2351355_2351976_-\|isochorismatase-family-protein	gnl\|CDD\|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	1.29971e-65
NZ_CP027869.1\|WP_137767716.1\|2338269_2339925_-\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	5.025e-158
NZ_CP027869.1\|WP_137768791.1\|2343999_2345100_+\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl\|CDD\|273015	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD].	1.51534e-89

>NZ_CP027869.1|WP_137767721.1|2346036_2347458_+|MHS-family-MFS-transporter
MTAAPAPAATTDTKPAGNPRSRVIIASLVGTSIEFYDFYVYATAAVLVFPTLFFPNEDPTASQLSSFVTFALAFFARPVGSIVFGHFGDRVGRKATLVASLLVMGTATFLIGCLPTFASIGIWAPVLLAVMRFAQGVGLGGEWSGAALLATENAPKGKRGVFGSMPQLGAPIGFLLANGLFIAINAAMPAGADGTPNADFQAWGWRIPFLLSAVLVIVGLYVRFKLVESTVFRGVQESGSVAKVPLGRVFRTSWKALIIGTFGMVATYVLFYFMTTFTLSYGTTAAEAGPLVPKVGLGYSRGEFLTLLMIGVVFFGIFTPVAGWLADKYGRRRTLIPTTIGIALFGLTFQFWFAASTGPITVVTFLIVGLSLMGLTFGPMGALLPELFPTNVRYTGSAIAYNVASILGASLAPTIALALWQPDGTIVWVGLYLTLAAVVTVVALFFVRETKGAGLDEADAAGSPDAAPADVRA
>NZ_CP027869.1|WP_137767720.1|2345096_2345753_+|GTP-cyclohydrolase-II
MTDALTSPTPGSPVQFEVATTVPTTHGTFEMRAYRDLVTSAEHVAIIATLPDGSMPGDDALVRVHSECLTGEAFGSLKCECGPQLDAALDTIATEGGVVVYLRGQEGRGIGLINKLKAYRLQEDGLDTLDANLALGLPADSREYGGAAGILADLGISRVRLLSNNPEKRRQLEEHGITVSSLVPLVVGVVAQNAGYLDTKRDRMGHQLPAHLEAGAAS
>NZ_CP027869.1|WP_137768791.1|2343999_2345100_+|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MRRALELAALGPAVGDHARVGAVLLSPAGDVLAEGWHKGAGTPHAEVDAMAKVPVEQLRGATAVVTLEPCNHVGRTGPCALALIEAGVGRVVYAIDDPGEQASGGGERLRAAGVDVVSGVLADEAEAFLERWLLSVRAGRPWVTVKWASSLDGRAAAADGTSKWITGAAARQHVHEQRAAHDAILVGTGTVLADDPSLTARGDAGELLADQPLPVVVGDRPVPDDAAVRRHPRGLLTLPGHDLAASLHTLRDHGVHSVLVEGGPTVASALVAAGLVDEVLVYLAPVLLGGPRTAIGDVGVGSIGDRRQLDITSTTRLGPDLLVRARPHRVRTGSVRPDDAATTTATTPTVTAACTADQAQNDRSTP
>NZ_CP027869.1|WP_137767719.1|2343336_2343942_+|GNAT-family-N-acetyltransferase
MLPVTLSSDRVHLSVPTRSDTAAITQGCQDPAVVRWTTVPTPYTDRDAQTFVDALVGPGWASDREYTWGIRRPGSTWLDGVVSFRTEHRDLGFWLAPTARGQGLMHAAVELVVDWAFSQGAADVYWECYEGNTGSASVARASGFSFTGTGTARIPDRDGGPTPAWTGLRRADGLPASDLAWPAASFAVRGHEGDASPTPRR
>NZ_CP027869.1|WP_137767718.1|2342323_2343334_+|tryptophan--tRNA-ligase
MTKTRIFSGIQPSAGSLHLGNYVGALMQWRDLQDDHDAIYCVVDMHAITSPQDPTELRASTRATAAQYIASGIDPTKSTLFVQSHVPAHAELAWVLNTLTGFGEASRMTQFKDKSARQGTEAASVGLFTYPILMAADILLYDTAVVPVGDDQRQHVELTRDLATRFNSRFGDTFVVPKAQIGTETARIYDLQDPTSKMSKSAASDNGLIRLLDDPKRTAKKIRSAVTDTEREIRADRQEKPGVTNLLAILSAFTRTPVASLEEQFVGKGYGDLKGAVADAVVAELEPVRARTLELLDDPAELDRLLAVGAERAESIAQATLARVYDRIGFVPRSRG
>NZ_CP027869.1|WP_137767717.1|2341445_2342288_+|exodeoxyribonuclease-III
MTRLRLASVNVNGVRAAFRKGMGDWLATRDVDVLALQEVRASSDDLAGLLGDEWDIVHDPATAKGRAGVAIASRHRAHVHRVEIGPSDFDSAGRWIEADYELDGTTVTVVSCYVHSGEVDTPKQDEKWRFLDAMSERLPALRAHNPLAVVVGDLNVGHDQRDIKNWKGNVKRAGFLPRERAYFSRFFGAEGEQVEGADGSTGPGLGWVDVGREQAGDVDGPYTWWSWRGQAFDNDSGWRIDYQVATPDLAAKVSSYTVDRAAAYDQRWSDHAPVVVDYEL
>NZ_CP027869.1|WP_066655121.1|2341032_2341305_+|HPr-family-phosphocarrier-protein
MSEATRTVTVASASGLHARPASLFVQTVTASGHQVTIAKGDKSGNAGSILALLGLGIENGDEVTLTVTGDDAETTADSLVEFLQTDHDAA
>NZ_CP027869.1|WP_058728882.1|2340186_2340957_+|DeoR/GlpR-transcriptional-regulator
MYAPERHQRIVERARSQGRVDVKDLAELLEVTPETIRRDLTSLERRGLVRRAHGGAIPVERITLHPGVGDRGGINQAEKMVIAEAALAELPENGSVMIDAGTSTICLAEMLPTDRGLTVVTHSLPVAMAVANRSGIDLHLLGGNIRSDSLAGVGTWTHQLIGMVSVDVAFISINGITPERGLTTHNMAEAAVKSAMIKSARRSILLADHTKFGREEFGRVAPLAAIDTIITDPGVNADLVREVEAAGTEVLWPGRD
>NZ_CP027869.1|WP_137767716.1|2338269_2339925_-|phosphoenolpyruvate--protein-phosphotransferase
MSELLGTGVGRGVAHGPVLRMADPLGEPSKDALTGTPDDAKHAVAEALAAVAEDLTKRGQLAGGDAQAVLEAQALMAQDPTLLDDVHARIDGGTNAERAVFEAFGQFRDLLVGMGGYMGERAADLDDVAQRIIAKLRGVPAPGVPESDTPFVLVARDLAPADTALLDLDKVLALVTRDGGPTSHTAILARAKGITAIVGVTGADGLADGTHVVVDAAAGTVVTDPSAELVADVDQRIADRLAAAAAPLTAGALADGHTVPLLANLGSPADAAGAVALGAEGVGLFRTEFLFLDSPKAPTVEQQTESYRQLLEAFPGKKVVVRALDAGADKPLPFLTDKDEENPALGRRGLRALRNHEEVLRDQLTALAQADAATEADLWVMAPMVADAEETEYFVGLARELGIRTAGVMAEVPSLALMAEQVFANADFVSVGTNDLTQYTMAADRMLGTVASYQDPWHPAVLRLVAQLGAAGADAGKAVGICGEAAADPLLAVVLVGLGATTLSMTPAALADVRAELGKHTLEQAREMAKAALAASTAAAAKSAAAAAHAV
>NZ_CP027869.1|WP_137767715.1|2336613_2338167_-|PTS-mannitol-transporter-subunit-IICB
MTTSSVAAPDAPAKSRGGARVAVQKFGTFLSGMVMPNIAIFIAWGLITAFFIETGWTPVGVLGGFGETNGVANIGLVSPILTYLIPLAIAFQGGRMIYETRGAVVGSIMAMGVIIGANGTIMILGAMICGPLGAWLIKQIDKIWDGKIKPGFEMLVNNYAAGILGFVLALIGFFWLAPLFKLIAEGLGAAVKFLVDSSLLPLASVIIEPAKVFFLNNAINHGVLDQLGAQQVQESGKSILFLLEANPGPGLGILLAFTFFGVGIARSTAPGAILIQFFGGIHEIYFPYVLQKPVLFIAVILGGATGVATNVAFHSGLVAPASPGSIIAVLTATAKDSYVGVILSVVLSAAVSFAVASFFLLASRKRDLANGGGDMSAAMAKLQANKGRDVNAATSGLLGNNAPRSEEETEAAFGGVGSGTATATRVESVVFACDAGMGSSAMGASVLRNKVKKAGIEGVTVVNKAIANLDGTEDLIITQEELTDRAKQKNPNAQHVSVGNFMNAPQYDQVVDQLKNQ
>NZ_CP027869.1|WP_137768792.1|2347837_2349709_+|ABC-transporter-ATP-binding-protein
MSLFSARRKPSEGPRASFGRLLTYLFENKPAMAVIIVLSVLGAGASLAQPLLVNQVVTAVQRGQTLSLLVWALVALVIVSGLLNGIQHFLLQRAGEGVVLSTRRKLIARILNLPISEFDTRRTGDLVSRVGSDTTLLRAVLTQGLIESIGGALTFVGAIIAMAVIDPLLLGITVVIVLVAIVVVGGLSRRIRIASKRAQEKVGDLTAAVERGIGAVRTIRAAGATDREVAEVDGHATEAYRRGLDIAKMSAFVVPVASIVMQVAFIAVLGVGGAQVAAGQITIATLITFILLLFMMVMPLGQALGAAVAVAQALGALGRIEEILHLPTEDQDDGAVRVAAATETDDAIAFEHVTFRYARSADASGPDGAAPSADAAASGGGARSGGSGAADDTGPADDVVLDDVSFRVPRGSRVALVGPSGAGKSTTLALIERFYDPTSGVIRLGGVDVRGLDRAELRAQIGYVEQDAPVLAGTIRANLLLGSPDASEAECVRVLEAVNLGDVLHRDPRGLDAQVGEDGVMLSGGERQRLAIARALLAAPPILLLDESTSSLDGVNEQKMRLAIDAVAADRTLLVIAHRLSTVVDSDVIVVLEHGRVVGTGTHSELVQSTPLYRDLAKHQLLV
>NZ_CP027869.1|WP_137767722.1|2349820_2351359_-|NAD-dependent-succinate-semialdehyde-dehydrogenase
MTTTPTTTGSTTTGTSSTGPTTTVADEHVSVADVPTGLFIAGAWRPASGGATFPVRDPSTGEVLAEVADATPEDGIAALDAAVAAQEGWASTAPRTRSDILRRAFDLAHEHEDDLAALMTLEMGKPLAESRGEVAYGSEFLRWFSEEAVRISGDYRTNPEGTGRGIVLRRPVGPVYAITPWNFPLAMATRKIGPALAAGCTVVLKPADLTPLTTLFLVELFRRAGLPDGVLNVVPSRDAKALSEPIIADRRLRKLTFTGSTPVGSALLKQAADNVLKTSMELGGNAPLLVFDDADLDEAVAAAMQAKFRNVGEACTAANRFFVQEGIADDFTAALSAKVEELRIGRGTEDGTTIGPLIDDRAVDKAAGLVDDAVQRGARLVTGGERVDRPGTFYAPTVLDQVQPGSDILTTEIFGPVVSITRFTTEEEGIRLANDTEYGLVAYAFTTDFRRGQRLAERLETGMLGLNTGVVSNAAFPFGGVKSSGLGREGSHEGLEEYLESVYVLTPDPFAA
>NZ_CP027869.1|WP_137767723.1|2351355_2351976_-|isochorismatase-family-protein
MARALLVVDVQNDFTEGGALGVTGGAALAERISAFTGRRGEEYDLIVGSRDWHHGDDDNGGHFAGPEGPDFVDTWPVHCVGGTPGAEYHPDLDTSVIDVHVFKGRGRPDYSAFQASTDDGTALPDLLAERRVTTVDVVGIATDHCVRATALDARAAGYDVAVYEDLVAGVDPDRSARALDEIRAVGGHVDRSDMDEGLANPGGAVL
>NZ_CP027869.1|WP_137767724.1|2352024_2353518_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MSDQQPPSKSVPARIRGAVASLRRSVARRPVPWIAGGLVGVLLLGSGASVAVAAATLPARQSAAPPSSASAAPSGTPRASATPSATPTDDTRTVPDAPAGPSALRTCTIEAAASAAGLGSFEGFVMNAATGETLFSRSGDTAAQTGSVMKTLTSATALAVLGGDHRIPTTVTKEADGTIALVGHGDATLSAGNGTVYPGAPTLAQLAQQVKAALGDAPVTTIVADDSYWSDADAWDPTWPESERTIGYQPRVTALMVDGDRANPAAATSPRSTDPVGRAGAAFRTALANAGVVGAGSAQVVQRATTSTDQIASVSSQPVSTLIGQMIPNSDNTLAEMLARVSSKESGAGGSAASLTGVYQKALAGYGLDPAGITIKDGSGESASNAVSPSFVAHLMVAVAAGEKGLGVLSESLPVAGVSGTLSSRFTGANAVARGKVHAKTGWIDSANTLGGYIDAEDGTRLTFAFYAIGSSRAAALPALDAVTAATYRCGGSLTSS
>NZ_CP027869.1|WP_137767725.1|2353644_2354652_-|Gfo/Idh/MocA-family-oxidoreductase
MTVRWGVIGTGGIAHSFVADCTAAGIDFVAVGSRSRESAEAFATEHGIARAHGSYAELVADPDVDAVYVATPHSRHAEDALLAIAAGKHVLVEKAFTITAAEARRVVDAARRADVAVSEAMWTRFLPQMRMVRELVAEGRIGRPRLVEATHHQALPTDPHHRLNDPALGGGAILDLGVYPISFAVDVLGVPTAVTAAGTLSDQGVDTQMGVVLTHDGGAQSMLHFGLDLRSPNTASIIGEDGRVDLDDTWYTPTTWRLRDRDGTVVEEYDSREELTGYAHEARAFEAMVTSGTHEGGVMDPEETVAVMAVMDEARRQVGVRYAADTAETDSPAAD
>NZ_CP027869.1|WP_137767726.1|2354918_2355554_-|TetR-family-transcriptional-regulator
MPEAAPGLRERKRRATRLAIQQAALRIALDSGWSAVTVDEVARRADVSPRTFFNYFPSKEQALLGDDPTLPSGRALDTFRAGGPSGELLADLGTLLVHTTSELVEERGLLAERQQVLRAAPELFTRRMASMKEFQAEIEEAVTVRLTTTEPDLAADPDALRRQARLASVVALAALRHAWWEWSDSASETELSEELQRSFDELGALVSRSLV
>NZ_CP027869.1|WP_137767727.1|2355704_2356847_-|DNA-polymerase-III-subunit-delta'
MSVWDGLTGQDDAVAALRSAAEAPNGTGGMTHSWLITGPPGSGRSNVAAAFAAALVGAGADDDHALQQITARTHPDVSVLTTQRVIITIDEIRQLVTSSYYAPSVGRYRIVIIEDADRMTERTSNLLLKALEEPPERTVWILCAPSEADLLPTIRSRVRSVRLRVPDVASVAELIVARTGVDRDLATDAARQAQSHIGMAQRLATSEDARARRRRTLETVLGVRSVGDAVLAAADLLSVADEDAKAITEQRDGEERDAALRSLGVEPGGTVPPALRSQLRALEEDQKRRATRSLRDGLDRILVDVSSLYRDLLLLGLGAPAEPVNLAMRDQLDRALEVVPPASALEVLDAIALARERIAANVAALLALEALLVTIARATR
>NZ_CP027869.1|WP_137767728.1|2356872_2357520_-|dTMP-kinase
MTGRFITLEGGDGAGKTTQAELLTAWLEEHGRTVVRTREPGGTELGQRIREMVLHERGHIAPRAEALLYAADRAHHVETVVRPALARGAVVLQDRYIDSSVAYQGAARGLGADRIRSVSDWAADGLVPDLTVLLDLDVTVGRSRVAAARGDVFDRLESEASTFHETVRRAFLDAAAAEPERFLVVDAEQPAAAVQRAVRSAVGALVGIVDEGGPA
>NZ_CP027869.1|WP_137768793.1|2357516_2360321_-|type-I-DNA-topoisomerase
MPGTKKLVIVESPAKAKTIAQYLGDGYEVQASVGHIRDLVEPKNLPAELKKGSLGKFSVDVDNGFEPYYVVSDAKKKTVTELKRALKDADELYLATDEDREGEAIAWHLLQVLKPKVPVKRMVFHEITKEAIQRAQEATRELDTALVDAQETRRILDRLYGYEVSPVLWRKVGPGLSAGRVQSAATRLVVDRERERLAFVSANYWDLAARFEKVGDTAFTARLARLQGTRVASGRDFDDRGALKGEAVRLDEASAAALTTVLEGAGDAVVRSVESKPYTRRPAAPFTTSTLQQEAARKLRFSARQTMSVAQGLYENGHITYMRTDSSSLSQQAVTAARKQAAALYGPETIPDKPRSYAGKSKNAQEAHEAIRPAGDTFRTPSEMDGVLRGNDWKLYDLIWKRTVASQMADAKGSTASVVLGVTSSDSVAGVASTANGTDAEFTASGTVITFRGFLNAYEEGRDEERHGGENGDAKLPQMTEGDHLGVSEVEAKGHDTSAPPRYTEASLVKTLEELGIGRPSTYAAIISTIMDRGYVTQRGSALVPNWIAFSVVRLLEDHFGDLVQYDFTAGMEEDLDRIASGDADRIDWLKGFYFGGGDHRGLRTVIDNLGEIDARDINSVELAPGLTLRIGRYGPYIEVPSDDPEKPRRVNVPEDLAPDELTAEKARELVEAPVVGDRVVGVNPETGKEVLAKDGRFGPYVTERTPEPEPTVDPSTGEVTESAAAGADASSAPTAAAAAAAEAGTTTAKGARTPAKKTTKKAAAPKERTASLFKSMDPQTVDLETALKLLDLPRVVGKDPESGDDITAQNGRYGPYIKKGTDTRTLPSEDAIFEIDLPGALELFAQPKYGGRRAATAALKEFEADPVSGKPIKVKDGRFGPYVTDGETNATIPRGEDVEAVDHARAVQLLADKRAKGPVKKKAPARKTAAKKK
>NZ_CP027869.1|WP_137767729.1|2360824_2361166_-|hypothetical-protein
MTALRAPVDDRGSVTVEFAVALPLVALVLVSLVAGVVLADRVGRLQAVAGAAARALGRGDDPAADAALAAAAGATSRVRHADGLVCVDVQGASAGPFSVLPLHATGCAADGGR

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Crispr_ID: NZ_CP027869_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027869_13

2949234-2949331

Orphan

Consensus_repeat	Method
CTGCGACAAGACGGCTGTCGTTCGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027869_13

>merge|NZ_CP027869|13|2949234-2949331|CRISPRCasFinder
CTGCGACAAGACGGCTGTCGTTCGACAACGGTCTTGTCGCCTCATGCACACGCACACGATGCGTGCGCACCCTGCGACATGACGGCTGTCGTTCGACA

>NZ_CP027869|13|13|2949234-2949331|CRISPRCasFinder
CTGCGACAAGACGGCTGTCGTTCGACA	ACGGTCTTGTCGCCTCATGCACACGCACACGATGCGTGCGCACC
CTGCGACATGACGGCTGTCGTTCGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027869.1\|WP_137768174.1\|2953363_2954044_-\|acyl-CoA-dehydrogenase	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768169.1\|2944744_2945944_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP027869.1\|WP_137768167.1\|2943835_2944441_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133000
NZ_CP027869.1\|WP_137768170.1\|2949465_2949975_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768177.1\|2956312_2956729_+\|HIT-domain-containing-protein	unknown	unknown	gnl\|CDD\|238608
NZ_CP027869.1\|WP_137768845.1\|2946945_2949207_+\|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl\|CDD\|273765
NZ_CP027869.1\|WP_137768163.1\|2938446_2939469_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|225070
NZ_CP027869.1\|WP_137768172.1\|2951982_2952753_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768162.1\|2938060_2938366_+\|monooxygenase	unknown	unknown	gnl\|CDD\|367760
NZ_CP027869.1\|WP_137768175.1\|2954299_2955880_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP027869.1\|WP_137768179.1\|2957267_2958734_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NZ_CP027869.1\|WP_137768164.1\|2939653_2940928_-\|1,4-beta-xylanase	unknown	unknown	gnl\|CDD\|214750
NZ_CP027869.1\|WP_137768173.1\|2952749_2953367_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|131283
NZ_CP027869.1\|WP_058727334.1\|2946040_2946907_+\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
NZ_CP027869.1\|WP_137768178.1\|2956834_2957266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768176.1\|2955988_2956288_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379161
NZ_CP027869.1\|WP_137768171.1\|2950105_2951986_-\|choice-of-anchor-G-family-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768168.1\|2944445_2944748_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027869.1\|WP_137768165.1\|2941213_2943310_+\|4-amino-4-deoxy-L-arabinose-transferase	unknown	unknown	gnl\|CDD\|224720
NZ_CP027869.1\|WP_137768166.1\|2943338_2943839_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP027869.1\|WP_137768169.1\|2944744_2945944_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	5.11263e-86
NZ_CP027869.1\|WP_137768167.1\|2943835_2944441_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	4.9124e-25
NZ_CP027869.1\|WP_137768179.1\|2957267_2958734_+\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	1.24144e-13
NZ_CP027869.1\|WP_137768177.1\|2956312_2956729_+\|HIT-domain-containing-protein	gnl\|CDD\|238608	cd01277, HINT_subgroup, HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides. This subgroup includes members from all three forms of cellular life. Although the biochemical function has not been characterised for many of the members of this subgroup, the proteins from Yeast have been shown to be involved in secretion, peroxisome formation and gene expression.	4.2728e-31
NZ_CP027869.1\|WP_137768845.1\|2946945_2949207_+\|FdhF/YdeP-family-oxidoreductase	gnl\|CDD\|273765	TIGR01701, Hypothetical_protein_Rv2900c/MT2968/Mb2924c., oxidoreductase alpha (molybdopterin) subunit. This model represents a well-defined clade of oxidoreductase alpha subunits most closely related to a group of formate dehydrogenases including the E. coli FdhH protein (TIGR01591). These alpha subunits contain a molybdopterin cofactor and generally associate with two other subunits which contain iron-sulfur clusters and cytochromes. The particular subunits with which this enzyme interacts and the substrate which is reduced is unknown at this time. In Ralstonia, the gene is associated with the cbb operon, but is not essential for CO2 fixation.	0
NZ_CP027869.1\|WP_137768163.1\|2938446_2939469_-\|amidohydrolase-family-protein	gnl\|CDD\|225070	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only].	2.64358e-32
NZ_CP027869.1\|WP_137768173.1\|2952749_2953367_-\|signal-peptidase-I	gnl\|CDD\|131283	TIGR02228, Signal_peptidase_I_W, signal peptidase I, archaeal type. This model represents signal peptidase I from most archaea, a subunit of the eukaryotic endoplasmic reticulum signal peptidase I complex, and an apparent signal peptidase I from a small number of bacteria. It is related to but does not overlap in hits with TIGR02227, the bacterial and mitochondrial signal peptidase I.	7.31103e-13
NZ_CP027869.1\|WP_137768175.1\|2954299_2955880_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.44232e-63
NZ_CP027869.1\|WP_137768164.1\|2939653_2940928_-\|1,4-beta-xylanase	gnl\|CDD\|214750	smart00633, Glyco_10, Glycosyl hydrolase family 10.	3.8054e-41
NZ_CP027869.1\|WP_058727334.1\|2946040_2946907_+\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	7.44678e-109
NZ_CP027869.1\|WP_137768162.1\|2938060_2938366_+\|monooxygenase	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	0.000627572
NZ_CP027869.1\|WP_137768176.1\|2955988_2956288_-\|hypothetical-protein	gnl\|CDD\|379161	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal. This family is often found at the very N-terminus of proteins from the phospholipase_D-nuclease family, PLDc, pfam00614. However, a large number of members are full-length within this family.	0.000173762
NZ_CP027869.1\|WP_137768165.1\|2941213_2943310_+\|4-amino-4-deoxy-L-arabinose-transferase	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	3.23527e-15
NZ_CP027869.1\|WP_137768166.1\|2943338_2943839_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.07443e-07

>NZ_CP027869.1|WP_137768845.1|2946945_2949207_+|FdhF/YdeP-family-oxidoreductase
MTVGEPKDWAAGVPGVLHSMGPALEQLGAARTAKLMLSLNQKGGFDCMSCAWPDPDKRKTAEFCENGGKAVVWEATPVLVPRTFWSEHSIHDLADKTEYWLGQQGRLTEPVWKPAGKDHYEPVSWERAFRIIADKLNGLDSPDQASFYTSGRTSNEAAFVYQLFVRAFGTNNLPDCSNMCHESTSLAMAEVVGIGKSTIAYDDFEHTELIIVMGQNPGTNHPRMLTALEDAKKNGAEIVAVNPLPEAGLRRYKNPQRVRGVIGHGTQIADQFLQIRLGGDMALLQALAKRVVLAEQKTPGVVDHAFIEAHTSGYEAFVEHILQVDDDEVVRATGLTIEEIDELAERYLHSERTIITWAMGITQHTKAVDTIKEIINLLLLRGNIGRPGAGASPIRGHSNVQGDRTMGIWEQMPDSFLDALAEEFHFEPPREHGVDALKGIEAMQRGDIKFWMGMGGNLVAAISDSQLAEAAFRGTEMTVQVSTKLNRSHAVVGEEALILPTMGRTEIDVQAAGPQFVSVEDTVCSVHGSHGQVPPVAPGLLSEVAIVCELAKATLGDRVPVDWQAMRDDYDVIRDHISHVVPGFDDYSRRAGSKEGFVLPNGPRDSRTFATETGKAMITVNELEHVDRPEGTLLLQTLRSHDQYNTTIYSLNDRYRGIKKGRHVVFVNPDDLVELGLADGDTVDIETVWHDDVERVLRDYRVVAYPSARGCAAAYFPEANVLVPLDSAAKGSNTPVSKAVPVRLTRVAVPAGV
>NZ_CP027869.1|WP_058727334.1|2946040_2946907_+|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MSRITARKRVTRITVATSRSVRDDLLAVEEPLEIRVGGNSLAITMRTPGNDVDLAAGFLVSEGVIARGDDFAAARYCAGATDEGLNTYNVLDVTLALGVPAPDPSLERAFYTTSSCGLCGKASIDAVRTTSQHAVHHDDLVLDPALLATFPDRLREAQDVFEKTGGLHAAALFDGTTGEMLVLREDVGRHNAVDKVVGWAVKEGRLPLSGTVLMVSGRASFELTQKASMAGIPVLAAVSAPSSLAVDLAKEVGITIVGFLRGQSMVVYSRPERITEPAPAPRETVSAP
>NZ_CP027869.1|WP_137768169.1|2944744_2945944_+|molybdopterin-molybdotransferase-MoeA
MTLVLPSWSEARRAAHEQGARLAADTAGADPGSGAVRLDLASALGRTLAADLLARADVPGHDGAAMDGWAVAGPGPWVLGAPIVAGAVPADEPLAVGHARPVTTGAPVPPGTEAVVRSEDASVDDDGRLVRHTSSARRHVRPAGEEVSRDQVLFPAGSVLTPPRAALAAASGVDDVLVAPVPTARVAVLGDEIVAAGIPRPGQVRDVFTHTLPSVLRTFGADPVATERVADDADGTARVLDAAQERIVVTTGGTAGSSTDHVRGALARIGAELLVDRVDVRPGRPMLLARRGTTVYLCLPGNPMAAMVGLVLLGGPLVAGLLGRPLEPTGSVRLAVDVPNDRPGALVLAHRTTPEGAMPASHQSSAMLRGLADADGLMIVPAGGGVAGEDVPPVRLPWV
>NZ_CP027869.1|WP_137768168.1|2944445_2944748_+|hypothetical-protein
MTTDDVLAAWTAELAEALGFPEDFTLDRDVVLDLARDAAHGVARPAAPLTTFLVGYAAGLRGGSSADLADAAATATRLALAHGAAADSADADGSTGPDAR
>NZ_CP027869.1|WP_137768167.1|2943835_2944441_+|NTP-transferase-domain-containing-protein
MTVPGVVPHDAVLLAGGRASRMGGIDKTALIADGLALSDHAVAAAARARIVVLVGLRDGRTAPDGVVVTREDPPFGGPVAGIAAGLAAVAAPAPWTLVLACDLVRPERAVDALLGAADDEADVDGFIAVDEDGRRQPLLALYRSDALRAAVRELGDPTGAAVRRLTAGLRLVEVPLPADLCADVDEPADATRATATARLLD
>NZ_CP027869.1|WP_137768166.1|2943338_2943839_+|GNAT-family-N-acetyltransferase
MEIRVADLDDAEAVAAFQVRAWEQTYRGLVPDAFLDAARSRDRRARWTERIRRGERRVVLVRAEDVVVGVSSTAPSAEPGLPATELCTLYLDAAVQGTGVSDQLLEAALGRAAAHLLVFSVNGRAKRFYARHGFAPQGSPQVDPGTGLDEERWVRGGSGAVRSVPA
>NZ_CP027869.1|WP_137768165.1|2941213_2943310_+|4-amino-4-deoxy-L-arabinose-transferase
MDSTHPAPTSGDRATARPARWWHQTVAQRATLVAIVVLGAVLSSWNLARGGDSSFYAAAARSMSESLPAFLSGSFDPGATVTLDKLAGFAVPQAISIHLFGMSTASLALPQVIEGVVTTLAVSVVALRWLGARAGLVAAALAASTPIFVSMFGHPMEDGLLTMSLAVALVWWQRAALTRTWWPLLLAGLFVGVGFQAKMLQAWLVLPALVLATVVATAGSGRRWRRAAGHVAALVGAAVVASLSWSVVLGLLPTGDHPYFDGSTDDSVFAMVFGYNGVDRFLPGLWPGAVGALGAAVGHAGTHVADAWRTATAGRGGGDHSLLQLFSPRYASQVGWSWPAALTGIGIGAARWWRRRPGREALLPAATLVALVVWLVTAVAVLSVLRLPHTAYVAGIGAQLAALGALGWWGAAGFVDAADRRLRLVPVGLLVVQGAWWAWLARASSEPALLGTIAVGVTVVALVVLVVRWRRSDPTAPSTRWRRTAAGVLVAAVVLGPACFSLQVLDAARDGSGGDASVGVGQGAFARGGGTPDRAFALGRGGTGGWSAGGRSSGPAPFTISAPDVVGGHTRLPSDEAALVDAAERAGGGQDGAPLFLTDSWRIAADVIGDTGDEVLTDGGFSGRVPVFTAAQVESIVRSGRTHLLVVASGTAATDPVRRAGADLGCRVVQRWGSTFADAASGRSFGGGTTSFALERCS
>NZ_CP027869.1|WP_137768164.1|2939653_2940928_-|1,4-beta-xylanase
MDTQQSDSQQSDTQQSIAHRTGTTVLTVVDHHGTPLPDVGVTVEQTRHAFGFGNIGFDFVALANDEVDGDEREHLERLADLYTDVFTTATLPFYWGTFEPERGRPDTARLRRTAEWFRERGIARKGHPLVWHTVQPDWLLGLPLDEVERLQRERIRREVSDLAGLVDTWDAINEVVIMPVFDNGDNAITPLARAKGRIPTIQMAFEEARATNPHATLLLNDFDLSSAYECLIEGVLEAGVQIDAIGLQTHMHQGYWGEETMLAMVDRFARYGLPLHLTETSLVSGDLMPAHVVDLNDHRVDSWPSTPEGEARQADEVERHYRSLVGPPAVEAVTYWGITDAGAWLGAPIGLVREDGTPKPSYEAVRRLVKEEWWTGPTVLRTDERGQVRVRGFRGDYRADARGASTAFAVGRDATEHEVVAPTT
>NZ_CP027869.1|WP_137768163.1|2938446_2939469_-|amidohydrolase-family-protein
MSGDAGTDGLVTARLIGIEEHWISEPVDRALRGMTGDDRDASLVLNDHGDVRARLTDLAERRLAAMDEQGVDVQVLSLAPPGAQVPSTADAVALARDANDEVVEAIRAHPGRFRAMATLPLADPAAAAAELERAVALGLTGVMTYGRVGDVTPDDPRYDDLWAVASRLHQPVFIHPQVPPGAVRRAAYSGLGEPVDLALATFGWGWHLEAGTAALRLMASGALDRHPDLQLVLGHWGELLLFWHGRADGIARTAGLDRSVTDYLRENVWITASGMLDPALLRHALAVTSVDRLVFSTDHPFQSPTREQVDGFLAELPDDAAREAFASGNARRLFGLGDQG
>NZ_CP027869.1|WP_137768162.1|2938060_2938366_+|monooxygenase
MTQTVLLEVQLRDDVAQDTIESAISETLAQTATFAGNESLEVLVDDTDPLHLVVLERWTTPADHDAYVAWRATDEGAPRALAAIVAAPPVTRTFSRALDLG
>NZ_CP027869.1|WP_137768170.1|2949465_2949975_-|hypothetical-protein
MTTDERAQETGRPTRRPPVVTAAVAIWAVVLVVRVVTVAIGAVHLALSEPGALPAALFGGVLGLGICALLAWATLLVWRGSGTARVWLGVMGAFAVVNVVVVTLTGNASWLTLEAVAVIAAAVLLWLPSARPWFPRTERRPRVQEPRTIGWDPQTGERITEPHEVADPR
>NZ_CP027869.1|WP_137768171.1|2950105_2951986_-|choice-of-anchor-G-family-protein
MRPQRARGARRRSPRHRAPRRPAVLRDLRRGPGAVLVAILAVVGATAAVVIPAPTSTTASWQDAEWVHGDGAIGTSSFSCGEDVGYTANSSSRFLGGSVAGQDLGAVADLRGLDVTKTGTQGVAVSPATAPEITRTETTAAYGNPLDVGVLGSVAGLDLTGLGTGLPGGSAGAVNQVATSVATGRSVAASGLVSDSGGVLVTDTTPTEALPEPATLDLGQALAGVADLQNISDAGLEVGAVGSSAQLDGCDLLEDEVWGTASGTAPDAPTVRPALLAATGTTTTAAAADRESQRVTRDYGIASLDLRIDSPLVRSLTSSVDATVRTLDAAVAEQSRGLAGLLTDEVEVGLAGIVRIGLVEGTASITAPDLATVLAPVLRETLTDGVVTVDLGSGQVRVDLAHLAGSPGSGLNGLPPNTELVLDDRMVGDLSGRVGTLLDGWTKRVIEQVTSLLASARVQVQLDVGSVKVLGIQALKLELRLDASLGAVLSGTAPLTVTPRLIGISLLPGVLDALTAQLRDVVSSAARTLVAVAAPLGTTLVNIAGTLVAGVTPVLRALPALLSVQVNVQRDVPGSRDGRYARTGSFSVTAIRIGVLGAGSGTPLAQVDLASSTVGPNLVDLGAPRS
>NZ_CP027869.1|WP_137768172.1|2951982_2952753_-|hypothetical-protein
MSPRPGSRAGAAAAGAVLCAVLGLGSGGAAVAAGWQAVPETGEPGGLVLEASPYPLHAPDLRPGRPAFWQVHTRVDRAGPISTEVELRREGALVEHPDGLRVTVTACERPWRGLDAAPVCDDGQRVLSIEPGEPDSLRVPVSDPDGDGSTWLLVELAVAGTVGASADDALMGLEASVGLGVTASAEDPVAGSSSIDGRDAGRPGRSTASTSSASLTSLAFTGAAFAAPLFVAAALVLVGVAVRLRRTAASGDGGVR
>NZ_CP027869.1|WP_137768173.1|2952749_2953367_-|signal-peptidase-I
MTRAATVSAAGASRDTPPRERPTLLHRVRAVVVAVAGIVGFLCVGWWAVAATTGLSFVVVTTGSMSPTIPAGAVVVTERVAAADVRPGQVVTVPRPGSPLPVTHRVVAVDRVPGDTAARSLTTRGDANDTVDRDPSVVREARRTIASAPVLGHVLQWSSTPAARGLAVATVGLLIVWSFWPARRAAGGGDGPGDGPGDDERGARG
>NZ_CP027869.1|WP_137768174.1|2953363_2954044_-|acyl-CoA-dehydrogenase
MSGQSSAPASRRTKVAALVAGGALVVGGVGYTLASWTDTEWVFGGNGTGGPGIATSTFEVEQNVTGALDTGWTQAETAPGQEMTFTPDAIALSPGDTTYASVVLRTTQDSIAGTVRLSAVRSMPVASGPANAGLLWEALDVRVAATAPQTACAASTFATATVVADGPLATSVASTAQRLGAANTSPQRYCFEISLPQTPRMPTGVPVEALQGLAVTPAWEFSAESE
>NZ_CP027869.1|WP_137768175.1|2954299_2955880_-|MFS-transporter
MAAEHRKPVEPDAAPTVAHHTAHHAATAEHPSAPQDSRQQQDPEQQDQGRQGDAPDPNRWKALVICLLGGGIVLLDVSIVNVALQSISSGLSGATPEAVQWILSGYALAFGLLLVPGGRLGDAVGRRRMFVAGVALFTLASALCGFAPNGLVLVIARLVQGLAGGLLTPQVTALIQQLFRGKERGTAFGLFGATVGIATAIGPLVGGLLITAFGTENGWRFVFFVNLPVGLVTILLAFRYLPTTPKAERGRKHDFDPVGILLLGAAVVALLLPFVQSEQWKSNAKWWLVVAAVVFAVLFVLWERRYGREHEPVIDLGLFRRRSFSLGVGLATVYFAGFTPLFFVLTLALQSGLQYSALLAGVASVPFAIGSGIASTIGGRIVHRFGRQLIVVGTVLVLIGLGAVIWVVADHYGPDLGWWLVLPLLVAGIGSGLTISPNQTLTLSEVPVQQGGSAGGLIQVGARVGSAIGIAAVGSVFYSSLASTKGDYSQGLPLGLGVSLVFVAAALVAGIVDVVVGRVRGTEASV
>NZ_CP027869.1|WP_137768176.1|2955988_2956288_-|hypothetical-protein
MSSARWTRGDGAGPSVGCSTTEEDHVFENFAGAHLLLIALLLALDVLALVQVWRDRRRSDAVKIVWTLVIVLVPVVGVLGWAVNWLLGKAADGLQRANR
>NZ_CP027869.1|WP_137768177.1|2956312_2956729_+|HIT-domain-containing-protein
MESCTFCSIIADRRPATWVEREEHAVAFAPLPGSALAPGHTLVVPVAHTADLLSADPTSLAACTALARRVGLAMRGALGATGTVLLQASGADAGQSVPHLHFHVVPCWPDDGTTHWPEPPSAHVHEGDPHADLRAMFE
>NZ_CP027869.1|WP_137768178.1|2956834_2957266_+|hypothetical-protein
MLRSTITTPLALGVLALGALTLSGCSALGDVAHDRVTSEAATRADLDAAPDWLPADARDITSVAGTGGKASDTTPTTLVFTSTDGVTDDACSTAPRQSAPTMDVEDAPDVYGATEVLRCGPWSMTSTGDRWIAWTPNPGDGGS
>NZ_CP027869.1|WP_137768179.1|2957267_2958734_+|ABC-transporter-permease
MSRPRGRHRAVDGRPAATERGRRAPGHAPGRGEHRATVGVAALSAGLGAVVVTGAEAAHRIVELGARTGSSATVAAILPVVAWVFIGIALYVSSVVASNTCATVIAGRTRALGLQRVLGATGQHLRWQVTRTGAACGLVGAALGTVVGTAAADAGLAVAAVSGTLPPLGVVAPPSLVPIGLLVAGITTVAFRIGSRAVLTISPLRALEAEVEAPAGATRSVGRTVTAGSLVLLGTVGLGGAVVLGATTVDSLLLAVACGAVSFTGVVVAAPVLLPAVLRLAAAAASRSVVPAMAARNALRAPRRTARATVGLLIAVTLMATFSVGFSTYAVMLQGQAADDPEYYRGIQEQFDQLAVMFTGLVGAAGVIAAAGVVVVTALTIAQRGRELGLLRVVGATRQQVRALVLAETTITVAVAVVLGGLLGTAYGWAGAYTLLGATKGAELIAPVVPAWLVVVVVVGAAGTGLAAALGPAARAVRAAPVTALRYE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	1485141-1485158	1	0.944
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	22844-22861	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	217413-217430	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	286863-286880	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	358208-358225	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	810639-810656	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	1271440-1271457	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	1322149-1322166	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	1941450-1941467	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	2024261-2024278	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	2113304-2113321	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	2442826-2442843	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	2512208-2512225	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	2619084-2619101	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	2641005-2641022	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	2788120-2788137	2	0.889
NZ_CP027869_8	8.1\|1836722\|18\|NZ_CP027869\|CRISPRCasFinder	1836722-1836739	18	NZ_CP027869.1	3454871-3454888	2	0.889

1. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 1485141-1485158, mismatch: 1, identity: 0.944

gctgcccgtcgccgtcgc	CRISPR spacer
gctgcccgtcggcgtcgc	Protospacer
*********** ******

2. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 22844-22861, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctggtcgtcgccgtcgc	Protospacer
**** .************

3. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 217413-217430, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgcccgccggcgtcgc	Protospacer
********.** ******

4. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 286863-286880, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgctcgccgccgtcgc	Protospacer
*****.**.*********

5. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 358208-358225, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gcggcccgacgccgtcgc	Protospacer
** ***** *********

6. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 810639-810656, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgcacggcgccgtcgc	Protospacer
***** ** *********

7. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 1271440-1271457, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gccgcccgacgccgtcgc	Protospacer
**.***** *********

8. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 1322149-1322166, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctcccagtcgccgtcgc	Protospacer
*** ** ***********

9. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 1941450-1941467, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgccgatcgccgtcgc	Protospacer
****** .**********

10. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 2024261-2024278, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgcccggcgacgtcgc	Protospacer
******** ** ******

11. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 2113304-2113321, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgcccgtcgcgctcgc	Protospacer
************  ****

12. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 2442826-2442843, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgctcgtcgccgccgc	Protospacer
*****.********.***

13. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 2512208-2512225, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgccgatcgccgtcgc	Protospacer
****** .**********

14. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 2619084-2619101, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gcagcgcgtcgccgtcgc	Protospacer
** ** ************

15. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 2641005-2641022, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgctcgccgccgtcgc	Protospacer
*****.**.*********

16. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 2788120-2788137, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gctgggcgtcgccgtcgc	Protospacer
****  ************

17. spacer 8.1|1836722|18|NZ_CP027869|CRISPRCasFinder matches to position: 3454871-3454888, mismatch: 2, identity: 0.889

gctgcccgtcgccgtcgc	CRISPR spacer
gccgcccgccgccgtcgc	Protospacer
**.*****.*********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027869_4	4.1\|1016964\|28\|NZ_CP027869\|CRISPRCasFinder	1016964-1016991	28	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	319292-319319	6	0.786
NZ_CP027869_4	4.1\|1016964\|28\|NZ_CP027869\|CRISPRCasFinder	1016964-1016991	28	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	543297-543324	6	0.786
NZ_CP027869_4	4.1\|1016964\|28\|NZ_CP027869\|CRISPRCasFinder	1016964-1016991	28	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	144401-144428	6	0.786
NZ_CP027869_4	4.1\|1016964\|28\|NZ_CP027869\|CRISPRCasFinder	1016964-1016991	28	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	431619-431646	6	0.786
NZ_CP027869_4	4.1\|1016964\|28\|NZ_CP027869\|CRISPRCasFinder	1016964-1016991	28	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	505313-505340	6	0.786
NZ_CP027869_5	5.2\|1225940\|27\|NZ_CP027869\|CRISPRCasFinder	1225940-1225966	27	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	301082-301108	6	0.778
NZ_CP027869_5	5.2\|1225940\|27\|NZ_CP027869\|CRISPRCasFinder	1225940-1225966	27	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	94301-94327	6	0.778
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NZ_CP017760	Cupriavidus necator strain NH9 plasmid pENH91, complete sequence	11532-11562	6	0.806
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	310218-310248	6	0.806
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NC_006830	Achromobacter xylosoxidans A8 plasmid pA81, complete sequence	87910-87940	6	0.806
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1520681-1520711	6	0.806
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	292580-292610	6	0.806
NZ_CP027869_5	5.2\|1225940\|27\|NZ_CP027869\|CRISPRCasFinder	1225940-1225966	27	JN106169	Uncultured bacterium plasmid pAKD18, complete sequence	51953-51979	7	0.741
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	2678-2708	7	0.774
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	115181-115211	7	0.774
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	1066570-1066600	9	0.71
NZ_CP027869_11	11.1\|1952056\|31\|NZ_CP027869\|CRISPRCasFinder	1952056-1952086	31	NZ_CP006988	Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence	19304-19334	9	0.71
NZ_CP027869_2	2.1\|38058\|55\|NZ_CP027869\|CRISPRCasFinder	38058-38112	55	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	11065-11119	11	0.8
NZ_CP027869_2	2.1\|38058\|55\|NZ_CP027869\|CRISPRCasFinder	38058-38112	55	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	2039094-2039148	15	0.727

1. spacer 4.1|1016964|28|NZ_CP027869|CRISPRCasFinder matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 6, identity: 0.786

tcgtggtgttccgggtggctgggcgtgt	CRISPR spacer
tcgtggtgttccggctggccggggcgga	Protospacer
************** ****.***   *

2. spacer 4.1|1016964|28|NZ_CP027869|CRISPRCasFinder matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.786

tcgtggtgttccgggtggctgggcgtgt	CRISPR spacer
tcgtggtgttccggctggccggggcgga	Protospacer
************** ****.***   *

3. spacer 4.1|1016964|28|NZ_CP027869|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 6, identity: 0.786

tcgtggtgttccgggtggctgggcgtgt	CRISPR spacer
tcgtggtgttccggctggccggggcgga	Protospacer
************** ****.***   *

4. spacer 4.1|1016964|28|NZ_CP027869|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.786

tcgtggtgttccgggtggctgggcgtgt	CRISPR spacer
tcgtggtgttccggctggccggggcgga	Protospacer
************** ****.***   *

5. spacer 4.1|1016964|28|NZ_CP027869|CRISPRCasFinder matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 6, identity: 0.786

tcgtggtgttccgggtggctgggcgtgt	CRISPR spacer
tcgtggtgttccggctggccggggcgga	Protospacer
************** ****.***   *

6. spacer 5.2|1225940|27|NZ_CP027869|CRISPRCasFinder matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 6, identity: 0.778

cggcagcgtgcctcccggccggcacgt	CRISPR spacer
cggcagcctgccgcccggccggctgcc	Protospacer
******* **** **********   .

7. spacer 5.2|1225940|27|NZ_CP027869|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

cggcagcgtgcctcccggccggcacgt	CRISPR spacer
cggcggcgtgcgtcccggccggctgcc	Protospacer
****.****** ***********   .

8. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NZ_CP017760 (Cupriavidus necator strain NH9 plasmid pENH91, complete sequence) position: , mismatch: 6, identity: 0.806

cgggttgttgccgggacgcggcgggcgcgag	CRISPR spacer
cgcggcattgccgggacgcggcgtgcgcggg	Protospacer
** * ..**************** *****.*

9. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.806

cgggttgttgccgggacgcggcgggcgcgag	CRISPR spacer
cgccttcgagccggtacgcggcgggcgcgag	Protospacer
**  **   ***** ****************

10. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NC_006830 (Achromobacter xylosoxidans A8 plasmid pA81, complete sequence) position: , mismatch: 6, identity: 0.806

cgggttgttgccgggacgcggcgggcgcgag	CRISPR spacer
cgcggcattgccgggacgcggcgtgcgcggg	Protospacer
** * ..**************** *****.*

11. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.806

cgggttgttgccgggacgcggcg-ggcgcgag	CRISPR spacer
cgggttgttgccgggaggccgcgctgcgccg-	Protospacer
**************** ** ***  **** .

12. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.806

cgggttgttgccgggacgcggcg-ggcgcgag	CRISPR spacer
cgggttgttgccgggaggccgcgctgcgccg-	Protospacer
**************** ** ***  **** .

13. spacer 5.2|1225940|27|NZ_CP027869|CRISPRCasFinder matches to JN106169 (Uncultured bacterium plasmid pAKD18, complete sequence) position: , mismatch: 7, identity: 0.741

cggcagcgtgcctcccggccggcacgt	CRISPR spacer
gcatcgtgtgcctcccggccggcacgg	Protospacer
  .. *.*******************

14. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 7, identity: 0.774

cgggttgttgccgggacgcggcgggcgcgag	CRISPR spacer
cgtccagttgccggggcgcggcgcgcgcgcg	Protospacer
**  . *********.******* ***** *

15. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 7, identity: 0.774

cgggttgttgccgggacgcggcgggcgcgag	CRISPR spacer
cgtccagttgccggggcgcggcgcgcgcgcg	Protospacer
**  . *********.******* ***** *

16. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

cgggttgttgccgggacgcggcgggcgcgag	CRISPR spacer
atggctgttgccgggacgctgcggggactgt	Protospacer
  **.************** ***** .* .

17. spacer 11.1|1952056|31|NZ_CP027869|CRISPRCasFinder matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 9, identity: 0.71

cgggttgttgccgggacgcggcgggcgcgag	CRISPR spacer
gatcgtgttgccgggacgcgtcggccgctcg	Protospacer
 .   *************** *** ***  *

18. spacer 2.1|38058|55|NZ_CP027869|CRISPRCasFinder matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 11, identity: 0.8

--ggatcggctgggtcgtggccgtggccgtggccgtggccgtggccgtggccgcggt	CRISPR spacer
ccgcgccgac--ggccggggccgtggccgtggccgtggccgtggccgtggccgtgag	Protospacer
  * ..**.*  **.** ***********************************.*.

19. spacer 2.1|38058|55|NZ_CP027869|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 15, identity: 0.727

ggatcggctgggtcgtggccgtggccgtggccgtggccgtggccgtggccgcggt-----	CRISPR spacer
------ctcaggccgtagccgtagccgtggccgtggccgtggccgtggccgtggccgggg	Protospacer
       ...**.***.*****.****************************.**.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage